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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G11590 AT3G11590 |
| fragaria_vesca | FvH4_6g19640 |
| malus_domestica | MD12G1032300.v1.1 MD14G1032400.v1.1 |
| prunus_persica | Prupe.7G100300_v2.0.a1 |
| pyrus_communis | pycom12g02990 pycom14g02920 |
| rosa_chinensis | RchiOBHm_Chr3g0474981 |
| rosa_laevigata | RLG00000023874 |
| rosa_multiflora | Rmu_sc0003093.1_g000007 |
| rosa_roxburghii | Rroxscaffold_6G00406670 |
| rosa_rugosa | Rorug03G0145900 |
| rosa_samantha | Rh3AG195200 Rh3BG225300 Rh3CG220200 Rh3DG220700 |
| rosa_wichuraiana | Rw3G017780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 71 |
| AccII | CGCG | 3 cut(s) | 36, 202, 1781 |
| AciI | CCGC | 8 cut(s) | 21, 27, 69, 117, 181, 263, 364, 842 |
| AclWI | GGATC | 6 cut(s) | 272, 318, 640, 1394, 1739, 1752 |
| AcsI | RAATTY | 2 cut(s) | 1206, 1540 |
| AcuI | CTGAAG | 2 cut(s) | 723, 969 |
| AcyI | GRCGYC | 3 cut(s) | 72, 344, 455 |
| AfaI | GTAC | 2 cut(s) | 1450, 1756 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 222, 340 |
| AflIII | ACRYGT | 1 cut(s) | 485 |
| AgeI | ACCGGT | 2 cut(s) | 323, 1751 |
| AgsI | TTSAA | 9 cut(s) | 493, 884, 1097, 1139, 1283, 1375, 1427, 1740, 1763 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 145 |
| AjiI | CACGTC | 1 cut(s) | 519 |
| AjnI | CCWGG | 3 cut(s) | 8, 74, 935 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1790, 1822 |
| Alw21I | GWGCWC | 3 cut(s) | 8, 1063, 1231 |
| Alw26I | GTCTC | 5 cut(s) | 153, 428, 784, 839, 1542 |
| AlwI | GGATC | 6 cut(s) | 272, 318, 640, 1394, 1739, 1752 |
| AoxI | GGCC | 5 cut(s) | 213, 585, 1733, 1769, 1828 |
| ApeKI | GCWGC | 9 cut(s) | 85, 88, 91, 713, 749, 1109, 1388, 1412, 1726 |
| ApoI | RAATTY | 2 cut(s) | 1206, 1540 |
| AsiGI | ACCGGT | 2 cut(s) | 323, 1751 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1477 |
| AspLEI | GCGC | 7 cut(s) | 36, 38, 74, 202, 247, 1781, 1783 |
| AspS9I | GGNCC | 2 cut(s) | 586, 1657 |
| AsuHPI | GGTGA | 4 cut(s) | 6, 39, 646, 899 |
| AsuII | TTCGAA | 2 cut(s) | 807, 1796 |
| AvaII | GGWCC | 1 cut(s) | 1657 |
| BamHI | GGATCC | 1 cut(s) | 1744 |
| BanI | GGYRCC | 1 cut(s) | 71 |
| BanII | GRGCYC | 5 cut(s) | 8, 451, 625, 1063, 1231 |
| BauI | CACGAG | 1 cut(s) | 444 |
| BbsI | GAAGAC | 1 cut(s) | 1290 |
| Bbv12I | GWGCWC | 3 cut(s) | 8, 1063, 1231 |
| BbvCI | CCTCAGC | 1 cut(s) | 185 |
| BbvI | GCAGC | 9 cut(s) | 97, 100, 103, 725, 736, 1121, 1400, 1424, 1738 |
| BccI | CCATC | 6 cut(s) | 187, 276, 289, 301, 390, 1496 |
| BceAI | ACGGC | 5 cut(s) | 82, 130, 1097, 1613, 1730 |
| BciT130I | CCWGG | 3 cut(s) | 10, 76, 937 |
| BcoDI | GTCTC | 5 cut(s) | 153, 428, 784, 839, 1542 |
| BfaI | CTAG | 3 cut(s) | 438, 1677, 1704 |
| BfmI | CTRYAG | 3 cut(s) | 468, 1386, 1692 |
| BfoI | RGCGCY | 1 cut(s) | 75 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 758, 1836 |
| BlpI | GCTNAGC | 1 cut(s) | 609 |
| Bme1390I | CCNGG | 3 cut(s) | 10, 76, 937 |
| Bme18I | GGWCC | 1 cut(s) | 1657 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 145 |
| BmgBI | CACGTC | 1 cut(s) | 519 |
| BmgT120I | GGNCC | 2 cut(s) | 586, 1657 |
| BmiI | GGNNCC | 7 cut(s) | 73, 322, 478, 1240, 1535, 1658, 1746 |
| BmrFI | CCNGG | 3 cut(s) | 10, 76, 937 |
| BmsI | GCATC | 1 cut(s) | 1017 |
| BoxI | GACNNNNGTC | 1 cut(s) | 574 |
| BpiI | GAAGAC | 1 cut(s) | 1290 |
| BpmI | CTGGAG | 3 cut(s) | 495, 635, 1601 |
| Bpu10I | CCTNAGC | 2 cut(s) | 185, 368 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 609 |
| Bpu14I | TTCGAA | 2 cut(s) | 807, 1796 |
| BpuEI | CTTGAG | 2 cut(s) | 797, 1047 |
| BsaHI | GRCGYC | 3 cut(s) | 72, 344, 455 |
| BsaJI | CCNNGG | 4 cut(s) | 39, 936, 1403, 1730 |
| BsaWI | WCCGGW | 3 cut(s) | 251, 323, 1751 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1432, 1462 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 222, 340 |
| Bse118I | RCCGGY | 2 cut(s) | 323, 1751 |
| Bse1I | ACTGG | 2 cut(s) | 843, 1584 |
| Bse3DI | GCAATG | 3 cut(s) | 29, 418, 1724 |
| BseBI | CCWGG | 3 cut(s) | 10, 76, 937 |
| BseDI | CCNNGG | 4 cut(s) | 39, 936, 1403, 1730 |
| BseGI | GGATG | 4 cut(s) | 312, 946, 1255, 1273 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 222, 340 |
| BseMI | GCAATG | 3 cut(s) | 29, 418, 1724 |
| BseMII | CTCAG | 7 cut(s) | 176, 382, 600, 609, 675, 785, 841 |
| BseNI | ACTGG | 2 cut(s) | 843, 1584 |
| BsePI | GCGCGC | 2 cut(s) | 34, 1779 |
| BseRI | GAGGAG | 2 cut(s) | 1067, 1141 |
| BseXI | GCAGC | 9 cut(s) | 97, 100, 103, 725, 736, 1121, 1400, 1424, 1738 |
| BseYI | CCCAGC | 1 cut(s) | 1775 |
| Bsh1236I | CGCG | 3 cut(s) | 36, 202, 1781 |
| BshFI | GGCC | 5 cut(s) | 215, 587, 1735, 1771, 1830 |
| BshNI | GGYRCC | 1 cut(s) | 71 |
| BshTI | ACCGGT | 2 cut(s) | 323, 1751 |
| BsiHKAI | GWGCWC | 3 cut(s) | 8, 1063, 1231 |
| BsiSI | CCGG | 3 cut(s) | 252, 324, 1752 |
| BslFI | GGGAC | 3 cut(s) | 276, 1670, 1692 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 222, 340 |
| BsmAI | GTCTC | 5 cut(s) | 153, 428, 784, 839, 1542 |
| BsmBI | CGTCTC | 2 cut(s) | 153, 1542 |
| BsmFI | GGGAC | 3 cut(s) | 276, 1670, 1692 |
| BsmI | GAATGC | 1 cut(s) | 1111 |
| BsnI | GGCC | 5 cut(s) | 215, 587, 1735, 1771, 1830 |
| Bsp119I | TTCGAA | 2 cut(s) | 807, 1796 |
| Bsp1286I | GDGCHC | 5 cut(s) | 8, 451, 625, 1063, 1231 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 609 |
| Bsp19I | CCATGG | 2 cut(s) | 39, 1730 |
| BspACI | CCGC | 8 cut(s) | 21, 27, 69, 117, 181, 263, 364, 842 |
| BspANI | GGCC | 5 cut(s) | 215, 587, 1735, 1771, 1830 |
| BspCNI | CTCAG | 7 cut(s) | 177, 381, 601, 608, 674, 786, 840 |
| BspFNI | CGCG | 3 cut(s) | 36, 202, 1781 |
| BspLI | GGNNCC | 7 cut(s) | 73, 322, 478, 1240, 1535, 1658, 1746 |
| BspMAI | CTGCAG | 1 cut(s) | 1390 |
| BspPI | GGATC | 6 cut(s) | 272, 318, 640, 1394, 1739, 1752 |
| BspT104I | TTCGAA | 2 cut(s) | 807, 1796 |
| BspT107I | GGYRCC | 1 cut(s) | 71 |
| BsrDI | GCAATG | 3 cut(s) | 29, 418, 1724 |
| BsrFI | RCCGGY | 2 cut(s) | 323, 1751 |
| BsrI | ACTGG | 2 cut(s) | 843, 1584 |
| BssAI | RCCGGY | 2 cut(s) | 323, 1751 |
| BssECI | CCNNGG | 4 cut(s) | 39, 936, 1403, 1730 |
| BssHII | GCGCGC | 2 cut(s) | 34, 1779 |
| BssNI | GRCGYC | 3 cut(s) | 72, 344, 455 |
| BssSI | CACGAG | 1 cut(s) | 444 |
| BssT1I | CCWWGG | 3 cut(s) | 39, 1403, 1730 |
| Bst2BI | CACGAG | 1 cut(s) | 444 |
| Bst2UI | CCWGG | 3 cut(s) | 10, 76, 937 |
| Bst4CI | ACNGT | 3 cut(s) | 548, 871, 1854 |
| Bst6I | CTCTTC | 4 cut(s) | 782, 971, 1092, 1296 |
| BstACI | GRCGYC | 3 cut(s) | 72, 344, 455 |
| BstBI | TTCGAA | 2 cut(s) | 807, 1796 |
| BstC8I | GCNNGC | 4 cut(s) | 36, 114, 1520, 1781 |
| BstDEI | CTNAG | 9 cut(s) | 81, 185, 368, 595, 609, 661, 794, 827, 1220 |
| BstDSI | CCRYGG | 2 cut(s) | 39, 1730 |
| BstEII | GGTNACC | 1 cut(s) | 12 |
| BstF5I | GGATG | 4 cut(s) | 312, 946, 1255, 1273 |
| BstFNI | CGCG | 3 cut(s) | 36, 202, 1781 |
| BstH2I | RGCGCY | 1 cut(s) | 75 |
| BstHHI | GCGC | 7 cut(s) | 36, 38, 74, 202, 247, 1781, 1783 |
| BstMAI | GTCTC | 5 cut(s) | 153, 428, 784, 839, 1542 |
| BstNI | CCWGG | 3 cut(s) | 10, 76, 937 |
| BstNSI | RCATGY | 4 cut(s) | 145, 608, 1522, 1691 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 574 |
| BstPI | GGTNACC | 1 cut(s) | 12 |
| BstSCI | CCNGG | 3 cut(s) | 8, 74, 935 |
| BstSFI | CTRYAG | 3 cut(s) | 468, 1386, 1692 |
| BstUI | CGCG | 3 cut(s) | 36, 202, 1781 |
| BstV1I | GCAGC | 9 cut(s) | 97, 100, 103, 725, 736, 1121, 1400, 1424, 1738 |
| BstV2I | GAAGAC | 1 cut(s) | 1290 |
| BstX2I | RGATCY | 1 cut(s) | 1744 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 389 |
| BstYI | RGATCY | 1 cut(s) | 1744 |
| BsuRI | GGCC | 5 cut(s) | 215, 587, 1735, 1771, 1830 |
| BtgI | CCRYGG | 2 cut(s) | 39, 1730 |
| BtrI | CACGTC | 1 cut(s) | 519 |
| BtsCI | GGATG | 4 cut(s) | 312, 946, 1255, 1273 |
| BtsI | GCAGTG | 1 cut(s) | 1795 |
| BtsIMutI | CAGTG | 1 cut(s) | 1795 |
| Cac8I | GCNNGC | 4 cut(s) | 36, 114, 1520, 1781 |
| CfoI | GCGC | 7 cut(s) | 36, 38, 74, 202, 247, 1781, 1783 |
| Cfr10I | RCCGGY | 2 cut(s) | 323, 1751 |
| Cfr13I | GGNCC | 2 cut(s) | 586, 1657 |
| CseI | GACGC | 3 cut(s) | 333, 463, 1185 |
| Csp6I | GTAC | 2 cut(s) | 1449, 1755 |
| CspAI | ACCGGT | 2 cut(s) | 323, 1751 |
| CviQI | GTAC | 2 cut(s) | 1449, 1755 |
| DdeI | CTNAG | 9 cut(s) | 81, 185, 368, 595, 609, 661, 794, 827, 1220 |
| DinI | GGCGCC | 1 cut(s) | 73 |
| DriI | GACNNNNNGTC | 1 cut(s) | 145 |
| Eam1104I | CTCTTC | 4 cut(s) | 782, 971, 1092, 1296 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 145 |
| EarI | CTCTTC | 4 cut(s) | 782, 971, 1092, 1296 |
| EciI | GGCGGA | 1 cut(s) | 857 |
| Ecl136II | GAGCTC | 3 cut(s) | 6, 1061, 1229 |
| Eco130I | CCWWGG | 3 cut(s) | 39, 1403, 1730 |
| Eco24I | GRGCYC | 5 cut(s) | 8, 451, 625, 1063, 1231 |
| Eco47I | GGWCC | 1 cut(s) | 1657 |
| Eco53kI | GAGCTC | 3 cut(s) | 6, 1061, 1229 |
| Eco57I | CTGAAG | 2 cut(s) | 723, 969 |
| Eco91I | GGTNACC | 1 cut(s) | 12 |
| EcoICRI | GAGCTC | 3 cut(s) | 6, 1061, 1229 |
| EcoO65I | GGTNACC | 1 cut(s) | 12 |
| EcoRII | CCWGG | 3 cut(s) | 8, 74, 935 |
| EcoT14I | CCWWGG | 3 cut(s) | 39, 1403, 1730 |
| EcoT38I | GRGCYC | 5 cut(s) | 8, 451, 625, 1063, 1231 |
| EgeI | GGCGCC | 1 cut(s) | 73 |
| EheI | GGCGCC | 1 cut(s) | 73 |
| ErhI | CCWWGG | 3 cut(s) | 39, 1403, 1730 |
| Esp3I | CGTCTC | 2 cut(s) | 153, 1542 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 843, 875, 1462, 1494, 1465, 1497 |
| FaqI | GGGAC | 3 cut(s) | 276, 1670, 1692 |
| FokI | GGATG | 4 cut(s) | 319, 953, 1262, 1280 |
| FriOI | GRGCYC | 5 cut(s) | 8, 451, 625, 1063, 1231 |
| FspBI | CTAG | 3 cut(s) | 438, 1677, 1704 |
| GlaI | GCGC | 7 cut(s) | 35, 37, 73, 201, 246, 1780, 1782 |
| GsaI | CCCAGC | 1 cut(s) | 1779 |
| GsuI | CTGGAG | 3 cut(s) | 495, 635, 1601 |
| HaeII | RGCGCY | 1 cut(s) | 75 |
| HaeIII | GGCC | 5 cut(s) | 215, 587, 1735, 1771, 1830 |
| HapII | CCGG | 3 cut(s) | 252, 324, 1752 |
| HgaI | GACGC | 3 cut(s) | 333, 463, 1185 |
| HhaI | GCGC | 7 cut(s) | 36, 38, 74, 202, 247, 1781, 1783 |
| Hin1I | GRCGYC | 3 cut(s) | 72, 344, 455 |
| Hin6I | GCGC | 7 cut(s) | 34, 36, 72, 200, 245, 1779, 1781 |
| HinP1I | GCGC | 7 cut(s) | 34, 36, 72, 200, 245, 1779, 1781 |
| HincII | GTYRAC | 1 cut(s) | 1133 |
| HindII | GTYRAC | 1 cut(s) | 1133 |
| HinfI | GANTC | 8 cut(s) | 44, 401, 637, 962, 983, 1129, 1307, 1375 |
| HpaII | CCGG | 3 cut(s) | 252, 324, 1752 |
| HphI | GGTGA | 4 cut(s) | 6, 39, 646, 899 |
| Hpy166II | GTNNAC | 3 cut(s) | 629, 1133, 1449 |
| Hpy188I | TCNGA | 9 cut(s) | 153, 172, 277, 301, 664, 967, 1078, 1194, 1501 |
| Hpy8I | GTNNAC | 3 cut(s) | 629, 1133, 1449 |
| Hpy99I | CGWCG | 1 cut(s) | 349 |
| HpyAV | CCTTC | 9 cut(s) | 333, 582, 878, 1006, 1153, 1265, 1746, 1820, 1836 |
| HpyCH4III | ACNGT | 3 cut(s) | 548, 871, 1854 |
| HpyCH4IV | ACGT | 2 cut(s) | 487, 518 |
| HpyCH4V | TGCA | 7 cut(s) | 767, 1109, 1388, 1486, 1522, 1616, 1627 |
| HpyF3I | CTNAG | 9 cut(s) | 81, 185, 368, 595, 609, 661, 794, 827, 1220 |
| HpySE526I | ACGT | 2 cut(s) | 487, 518 |
| Hsp92I | GRCGYC | 3 cut(s) | 72, 344, 455 |
| HspAI | GCGC | 7 cut(s) | 34, 36, 72, 200, 245, 1779, 1781 |
| KasI | GGCGCC | 1 cut(s) | 71 |
| LmnI | GCTCC | 5 cut(s) | 11, 476, 730, 1440, 1539 |
| Lsp1109I | GCAGC | 9 cut(s) | 97, 100, 103, 725, 736, 1121, 1400, 1424, 1738 |
| LweI | GCATC | 1 cut(s) | 1017 |
| MaeI | CTAG | 3 cut(s) | 438, 1677, 1704 |
| MaeII | ACGT | 2 cut(s) | 487, 518 |
| MaeIII | GTNAC | 3 cut(s) | 12, 600, 943 |
| MflI | RGATCY | 1 cut(s) | 1744 |
| MhlI | GDGCHC | 5 cut(s) | 8, 451, 625, 1063, 1231 |
| MluCI | AATT | 4 cut(s) | 537, 929, 1206, 1540 |
| Mly113I | GGCGCC | 1 cut(s) | 72 |
| MlyI | GAGTC | 2 cut(s) | 38, 1138 |
| MmeI | TCCRAC | 2 cut(s) | 150, 378 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1477 |
| MseI | TTAA | 3 cut(s) | 422, 864, 1340 |
| MslI | CAYNNNNRTG | 3 cut(s) | 411, 1194, 1717 |
| MspA1I | CMGCKG | 2 cut(s) | 473, 643 |
| MspI | CCGG | 3 cut(s) | 252, 324, 1752 |
| MspR9I | CCNGG | 3 cut(s) | 10, 76, 937 |
| Mva1269I | GAATGC | 1 cut(s) | 1111 |
| MvaI | CCWGG | 3 cut(s) | 10, 76, 937 |
| MvnI | CGCG | 3 cut(s) | 36, 202, 1781 |
| NarI | GGCGCC | 1 cut(s) | 72 |
| NcoI | CCATGG | 2 cut(s) | 39, 1730 |
| NlaIV | GGNNCC | 7 cut(s) | 73, 322, 478, 1240, 1535, 1658, 1746 |
| NmuCI | GTSAC | 2 cut(s) | 12, 943 |
| NspI | RCATGY | 4 cut(s) | 145, 608, 1522, 1691 |
| NspV | TTCGAA | 2 cut(s) | 807, 1796 |
| PaeI | GCATGC | 1 cut(s) | 1522 |
| PauI | GCGCGC | 2 cut(s) | 34, 1779 |
| PctI | GAATGC | 1 cut(s) | 1111 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1477 |
| PfeI | GAWTC | 6 cut(s) | 401, 637, 962, 983, 1307, 1375 |
| PflFI | GACNNNGTC | 1 cut(s) | 517 |
| PinAI | ACCGGT | 2 cut(s) | 323, 1751 |
| PleI | GAGTC | 2 cut(s) | 38, 1137 |
| PluTI | GGCGCC | 1 cut(s) | 75 |
| PpsI | GAGTC | 2 cut(s) | 38, 1137 |
| PshAI | GACNNNNGTC | 1 cut(s) | 574 |
| Psp124BI | GAGCTC | 3 cut(s) | 8, 1063, 1231 |
| Psp6I | CCWGG | 3 cut(s) | 8, 74, 935 |
| PspEI | GGTNACC | 1 cut(s) | 12 |
| PspFI | CCCAGC | 1 cut(s) | 1775 |
| PspGI | CCWGG | 3 cut(s) | 8, 74, 935 |
| PspN4I | GGNNCC | 7 cut(s) | 73, 322, 478, 1240, 1535, 1658, 1746 |
| PspPI | GGNCC | 2 cut(s) | 586, 1657 |
| PstI | CTGCAG | 1 cut(s) | 1390 |
| PsuI | RGATCY | 1 cut(s) | 1744 |
| PsyI | GACNNNGTC | 1 cut(s) | 517 |
| PteI | GCGCGC | 2 cut(s) | 34, 1779 |
| PvuII | CAGCTG | 2 cut(s) | 473, 643 |
| RsaI | GTAC | 2 cut(s) | 1450, 1756 |
| RsaNI | GTAC | 2 cut(s) | 1449, 1755 |
| RseI | CAYNNNNRTG | 3 cut(s) | 411, 1194, 1717 |
| SacI | GAGCTC | 3 cut(s) | 8, 1063, 1231 |
| SaqAI | TTAA | 3 cut(s) | 422, 864, 1340 |
| Sau96I | GGNCC | 2 cut(s) | 586, 1657 |
| SchI | GAGTC | 2 cut(s) | 38, 1138 |
| ScrFI | CCNGG | 3 cut(s) | 10, 76, 937 |
| SduI | GDGCHC | 5 cut(s) | 8, 451, 625, 1063, 1231 |
| SfaNI | GCATC | 1 cut(s) | 1017 |
| SfcI | CTRYAG | 3 cut(s) | 468, 1386, 1692 |
| SfoI | GGCGCC | 1 cut(s) | 73 |
| SfuI | TTCGAA | 2 cut(s) | 807, 1796 |
| SinI | GGWCC | 1 cut(s) | 1657 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 411, 1194, 1717 |
| SmlI | CTYRAG | 2 cut(s) | 776, 1062 |
| SmoI | CTYRAG | 2 cut(s) | 776, 1062 |
| SphI | GCATGC | 1 cut(s) | 1522 |
| Sse9I | AATT | 4 cut(s) | 537, 929, 1206, 1540 |
| SsiI | CCGC | 8 cut(s) | 21, 27, 69, 117, 181, 263, 364, 842 |
| SspDI | GGCGCC | 1 cut(s) | 71 |
| SspMI | CTAG | 3 cut(s) | 438, 1677, 1704 |
| SstI | GAGCTC | 3 cut(s) | 8, 1063, 1231 |
| StyD4I | CCNGG | 3 cut(s) | 8, 74, 935 |
| StyI | CCWWGG | 3 cut(s) | 39, 1403, 1730 |
| TaaI | ACNGT | 3 cut(s) | 548, 871, 1854 |
| TaiI | ACGT | 2 cut(s) | 490, 521 |
| TaqI | TCGA | 5 cut(s) | 568, 678, 744, 807, 1796 |
| TaqII | GACCGA | 1 cut(s) | 303 |
| TasI | AATT | 4 cut(s) | 537, 929, 1206, 1540 |
| TatI | WGTACW | 1 cut(s) | 1448 |
| TauI | GCSGC | 5 cut(s) | 72, 119, 184, 265, 367 |
| TfiI | GAWTC | 6 cut(s) | 401, 637, 962, 983, 1307, 1375 |
| Tru1I | TTAA | 3 cut(s) | 422, 864, 1340 |
| Tru9I | TTAA | 3 cut(s) | 422, 864, 1340 |
| TscAI | CASTG | 1 cut(s) | 1795 |
| TseFI | GTSAC | 2 cut(s) | 12, 943 |
| TseI | GCWGC | 9 cut(s) | 85, 88, 91, 713, 749, 1109, 1388, 1412, 1726 |
| Tsp45I | GTSAC | 2 cut(s) | 12, 943 |
| TspGWI | ACGGA | 1 cut(s) | 1302 |
| TspRI | CASTG | 1 cut(s) | 1795 |
| Tth111I | GACNNNGTC | 1 cut(s) | 517 |
| VpaK11BI | GGWCC | 1 cut(s) | 1657 |
| XapI | RAATTY | 2 cut(s) | 1206, 1540 |
| XceI | RCATGY | 4 cut(s) | 145, 608, 1522, 1691 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1667 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1477 |
| XspI | CTAG | 3 cut(s) | 438, 1677, 1704 |