Rw3G017780

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0013091
Physical Location & Seq
Forward (+)
19568021 .. 19571144
3124 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G017780.1

Sequence Viewer

Length: 1764 bp
ATGCCGAGGCGCCACAACAACGACATGGACCTGATGATCCCCGGGAAGATCAGAAAGCGAGGCTGCTCGTCCTCGGCTTCGTCTTCGTCGTCGATCATCCAGAACTACAGATTCAAGCGGGCGATTCTGGTCGGGAAGAGGGGCGGATCCACTACGCCCGTGCCTACCTGGAAGCTCATGGGATCCAGGTCCCCCGCGTCCGCATTGCGGGGGGCCATGGAGTCTCCCAAGCACGCGCCGTCGCAGGGCGGCGGCGGCGGAGTTTCGAAGGGAAAACAGTCGCCGAGGCCTCCGGTGTCGGCGAGGAAGCTGGCGGCGACGCTTTGGGAAATGAACGACGTGCCGTCGCCGAGAGTGAAGGAAGAGGTGGATGAGCGGAGGATGAGGAAGGAGATTAGGGCCAGAGAGAAAGAGAGGGTTGCTCGGTCTCTGCGCTCGGGTTCTCTGCCTCCTCATCTCTCCGATCCGTCGCACAGTCCCGTTTCAGAGAGGATGGATCGATCTGGAACAGGTAGTTTGCACAGAAGGTCATCCTCTATTTCACAGAGGCTCAGGCTTACAGATCAACATTCTGGAGTATTGGATTCTCATGGAAATGGCAGCCTAATGGAGGTTGAGTCTCGATCAAGAGCCCAGACTCCGACTAGATCGAGAGCTCAGACTCCTAGTGCTTCAACTGTTGGAATCAAGCCACGTTTGAAGGATGTTAGTAATGCTCTGACAACGTCTAAAGAGCTACTGAAAATTATACACCGCATTTGGGGTAATGAAGATCAGCCTTCATCTAGCATGGCCCTTATCTCAGCCTTACATGCTGAGCTCGAGAGGGCTCGTTTGCTGGTGAATCAGCATATCCACGAACAGCGCTCAGAGCAGAATGAGATCAGCTATCTCATGAAGTGTTTTGCTGAAGAAAAGGCAGCTTGGAAAAGCAAGGAGCACAAAGTAGTTGAGGCTGCCATCGAGTCTGTTGCACAAGAACTTGAGGTGGAGAGAAAACTGAGAAGGAGGCTTGAAAGCTTGAACAAGAAACTCGGGAAAGAACTGGCAGAGACAAAAGCATCTCTCGTTAAGGCAGTCAAAGAACTTGAGAGTGAGAAGAGAACGAGAGAGATCATGGAACAAGTGTGTGATGAATTAGCCAGGGATATTAATGAAGATAAACTTGAAGCAGAGGAACTGAAGTGGGAGTCTGCAAAAGTTCGTGAAGAGGTCGAAAAGGAAAGGGAGATGATGCAGTTCTCTGATGTGCTGCGTGAGGGGAGAGCTCAAGAGAAACTCTCAGAGGCAAAATATCAGCTTGAGGAGAAGAATGCTGCTGTTGATATGTTGAGGAGTCAACTTGAAGCCTTTATGGGAAGTAAGAGAACAAAAGAAAAAGGACGCGGTTCTGCACATCTGAAAGATGAAGATATTGCAGCCTATCTAAGTAGAACTTCCCTCGGTTCCCATCAGGGTGAAGAAAAAGATGAGGATGGAGGAGAAGTTGAAGATGGAGTAGAATGCGAAGAGGATTCTGCTGAAAGTGATTTGCATTCCATAGAATTAAGTATGGGCAACAATAACAAAAGCTATAACTGGAGTCATGCTTCTGTAGCTGCTCGGGATCCAAGATGGGCTCCAAATGATGACGAAGAAATCAAAGGGAGGAAGTCCATGTCGGGAAGCCACCAAGAAAAAGCACTTCTTTGCAAAGGAGCATATCAGATGGATTGGAATGGGGCATGCAGACTGAAAGGCTCCAAAATTCAGGAGATAGGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

587

Amino Acids

65.72

Weight (kDa)

9.0

Isoelectric Point (pI)

57.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013091)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G11590 AT3G11590
fragaria_vesca FvH4_6g19640
malus_domestica MD12G1032300.v1.1 MD14G1032400.v1.1
prunus_persica Prupe.7G100300_v2.0.a1
pyrus_communis pycom12g02990 pycom14g02920
rosa_chinensis RchiOBHm_Chr3g0474981
rosa_laevigata RLG00000023874
rosa_multiflora Rmu_sc0003093.1_g000007
rosa_roxburghii Rroxscaffold_6G00406670
rosa_rugosa Rorug03G0145900
rosa_samantha Rh3AG195200 Rh3BG225300 Rh3CG220200 Rh3DG220700
rosa_wichuraiana Rw3G017780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 9
AccBSI CCGCTC 1 cut(s) 376
AccII CGCG 3 cut(s) 197, 236, 1386
AclWI GGATC 9 cut(s) 31, 141, 154, 177, 190, 458, 504, 1601, 1614
AcsI RAATTY 1 cut(s) 1746
AcuI CTGAAG 2 cut(s) 930, 1202
AcyI GRCGYC 1 cut(s) 10
AfeI AGCGCT 1 cut(s) 866
AfiI CCNNNNNNNGG 4 cut(s) 207, 245, 610, 760
AgsI TTSAA 8 cut(s) 115, 675, 700, 1016, 1024, 1169, 1346, 1490
AhdI GACNNNNNGTC 1 cut(s) 343
AjiI CACGTC 1 cut(s) 340
AjnI CCWGG 3 cut(s) 167, 185, 1142
Alw21I GWGCWC 4 cut(s) 658, 822, 942, 1270
Alw26I GTCTC 4 cut(s) 228, 432, 624, 1046
AlwI GGATC 9 cut(s) 31, 141, 154, 177, 190, 458, 504, 1601, 1614
Ama87I CYCGRG 5 cut(s) 41, 436, 821, 1034, 1602
Aor51HI AGCGCT 1 cut(s) 866
AoxI GGCC 4 cut(s) 213, 287, 399, 792
ApeKI GCWGC 8 cut(s) 63, 600, 920, 956, 1252, 1316, 1418, 1598
ApoI RAATTY 1 cut(s) 1746
AseI ATTAAT 1 cut(s) 1152
AspLEI GCGC 4 cut(s) 12, 238, 435, 867
AspS9I GGNCC 5 cut(s) 28, 189, 213, 399, 793
AsuC2I CCSGG 2 cut(s) 42, 43
AsuHPI GGTGA 2 cut(s) 853, 1469
AsuII TTCGAA 1 cut(s) 266
AvaI CYCGRG 5 cut(s) 41, 436, 821, 1034, 1602
AvaII GGWCC 2 cut(s) 28, 189
BamHI GGATCC 3 cut(s) 146, 182, 1606
BanI GGYRCC 1 cut(s) 9
BanII GRGCYC 6 cut(s) 634, 658, 822, 832, 1270, 1621
BbsI GAAGAC 1 cut(s) 75
Bbv12I GWGCWC 4 cut(s) 658, 822, 942, 1270
BbvI GCAGC 8 cut(s) 50, 612, 932, 943, 1239, 1303, 1430, 1585
BccI CCATC 7 cut(s) 487, 968, 1458, 1469, 1487, 1608, 1702
BceAI ACGGC 2 cut(s) 223, 328
BcgI CGANNNNNNTGC 2 cut(s) 953, 987
BciT130I CCWGG 3 cut(s) 169, 187, 1144
BcnI CCSGG 2 cut(s) 42, 43
BcoDI GTCTC 4 cut(s) 228, 432, 624, 1046
BfaI CTAG 3 cut(s) 645, 666, 786
BfmI CTRYAG 2 cut(s) 106, 1593
BfoI RGCGCY 2 cut(s) 13, 868
BlpI GCTNAGC 1 cut(s) 816
Bme1390I CCNGG 5 cut(s) 42, 43, 169, 187, 1144
Bme18I GGWCC 2 cut(s) 28, 189
BmeRI GACNNNNNGTC 1 cut(s) 343
BmeT110I CYCGRG 5 cut(s) 41, 436, 821, 1034, 1602
BmgBI CACGTC 1 cut(s) 340
BmgT120I GGNCC 5 cut(s) 28, 189, 213, 399, 793
BmiI GGNNCC 9 cut(s) 11, 148, 184, 191, 214, 1447, 1608, 1620, 1741
BmrFI CCNGG 5 cut(s) 42, 43, 169, 187, 1144
BmsI GCATC 2 cut(s) 1070, 1224
BpiI GAAGAC 1 cut(s) 75
BplI GAGNNNNNCTC 4 cut(s) 406, 438, 1265, 1297
BpmI CTGGAG 2 cut(s) 594, 1600
Bpu10I CCTNAGC 1 cut(s) 551
Bpu1102I GCTNAGC 1 cut(s) 816
Bpu14I TTCGAA 1 cut(s) 266
BpuEI CTTGAG 4 cut(s) 1004, 1109, 1254, 1322
BpuMI CCSGG 2 cut(s) 42, 43
Bsa29I ATCGAT 1 cut(s) 499
BsaHI GRCGYC 1 cut(s) 10
BsaI GGTCTC 1 cut(s) 432
BsaJI CCNNGG 8 cut(s) 5, 40, 41, 72, 216, 284, 1143, 1441
BsaWI WCCGGW 1 cut(s) 292
BsaXI ACNNNNNCTCC 5 cut(s) 602, 632, 1470, 1500, 1745
Bsc4I CCNNNNNNNGG 4 cut(s) 207, 245, 610, 760
Bse1I ACTGG 2 cut(s) 1050, 1583
Bse3DI GCAATG 1 cut(s) 203
BseBI CCWGG 3 cut(s) 169, 187, 1144
BseCI ATCGAT 1 cut(s) 499
BseDI CCNNGG 8 cut(s) 5, 40, 41, 72, 216, 284, 1143, 1441
BseGI GGATG 7 cut(s) 96, 376, 387, 498, 530, 709, 1480
BseLI CCNNNNNNNGG 4 cut(s) 207, 245, 610, 760
BseMI GCAATG 1 cut(s) 203
BseMII CTCAG 7 cut(s) 565, 671, 807, 816, 882, 992, 1296
BseNI ACTGG 2 cut(s) 1050, 1583
BseRI GAGGAG 4 cut(s) 441, 1319, 1348, 1494
BseXI GCAGC 8 cut(s) 50, 612, 932, 943, 1239, 1303, 1430, 1585
BsgI GTGCAG 1 cut(s) 1377
Bsh1236I CGCG 3 cut(s) 197, 236, 1386
BshFI GGCC 4 cut(s) 215, 289, 401, 794
BshNI GGYRCC 1 cut(s) 9
BshVI ATCGAT 1 cut(s) 499
BsiHKAI GWGCWC 4 cut(s) 658, 822, 942, 1270
BsiHKCI CYCGRG 5 cut(s) 41, 436, 821, 1034, 1602
BsiSI CCGG 2 cut(s) 42, 293
BslFI GGGAC 2 cut(s) 175, 462
BslI CCNNNNNNNGG 4 cut(s) 207, 245, 610, 760
BsmAI GTCTC 4 cut(s) 228, 432, 624, 1046
BsmFI GGGAC 2 cut(s) 175, 462
BsmI GAATGC 3 cut(s) 1318, 1508, 1534
BsnI GGCC 4 cut(s) 215, 289, 401, 794
Bso31I GGTCTC 1 cut(s) 432
BsoBI CYCGRG 5 cut(s) 41, 436, 821, 1034, 1602
Bsp119I TTCGAA 1 cut(s) 266
Bsp1286I GDGCHC 7 cut(s) 634, 658, 822, 832, 942, 1270, 1621
Bsp1720I GCTNAGC 1 cut(s) 816
Bsp19I CCATGG 1 cut(s) 216
BspANI GGCC 4 cut(s) 215, 289, 401, 794
BspCNI CTCAG 7 cut(s) 564, 670, 808, 815, 881, 993, 1295
BspDI ATCGAT 1 cut(s) 499
BspFNI CGCG 3 cut(s) 197, 236, 1386
BspHI TCATGA 1 cut(s) 894
BspLI GGNNCC 9 cut(s) 11, 148, 184, 191, 214, 1447, 1608, 1620, 1741
BspPI GGATC 9 cut(s) 31, 141, 154, 177, 190, 458, 504, 1601, 1614
BspT104I TTCGAA 1 cut(s) 266
BspT107I GGYRCC 1 cut(s) 9
BspTNI GGTCTC 1 cut(s) 432
BsrBI CCGCTC 1 cut(s) 376
BsrDI GCAATG 1 cut(s) 203
BsrI ACTGG 2 cut(s) 1050, 1583
BssECI CCNNGG 8 cut(s) 5, 40, 41, 72, 216, 284, 1143, 1441
BssNI GRCGYC 1 cut(s) 10
BssT1I CCWWGG 1 cut(s) 216
Bst2UI CCWGG 3 cut(s) 169, 187, 1144
Bst4CI ACNGT 3 cut(s) 279, 476, 679
Bst6I CTCTTC 5 cut(s) 131, 357, 1094, 1203, 1503
BstACI GRCGYC 1 cut(s) 10
BstBI TTCGAA 1 cut(s) 266
BstC8I GCNNGC 4 cut(s) 120, 234, 312, 1726
BstDEI CTNAG 8 cut(s) 551, 657, 802, 816, 868, 1001, 1282, 1427
BstDSI CCRYGG 1 cut(s) 216
BstENI CCTNNNNNAGG 1 cut(s) 608
BstF5I GGATG 7 cut(s) 96, 376, 387, 498, 530, 709, 1480
BstFNI CGCG 3 cut(s) 197, 236, 1386
BstH2I RGCGCY 2 cut(s) 13, 868
BstHHI GCGC 4 cut(s) 12, 238, 435, 867
BstMAI GTCTC 4 cut(s) 228, 432, 624, 1046
BstMWI GCNNNNNNNGC 4 cut(s) 255, 812, 871, 1595
BstNI CCWGG 3 cut(s) 169, 187, 1144
BstNSI RCATGY 2 cut(s) 815, 1728
BstSCI CCNGG 5 cut(s) 40, 41, 167, 185, 1142
BstSFI CTRYAG 2 cut(s) 106, 1593
BstUI CGCG 3 cut(s) 197, 236, 1386
BstV1I GCAGC 8 cut(s) 50, 612, 932, 943, 1239, 1303, 1430, 1585
BstV2I GAAGAC 1 cut(s) 75
BstX2I RGATCY 3 cut(s) 146, 182, 1606
BstYI RGATCY 3 cut(s) 146, 182, 1606
Bsu15I ATCGAT 1 cut(s) 499
BsuRI GGCC 4 cut(s) 215, 289, 401, 794
BsuTUI ATCGAT 1 cut(s) 499
BtgI CCRYGG 1 cut(s) 216
BtrI CACGTC 1 cut(s) 340
BtsCI GGATG 7 cut(s) 96, 376, 387, 498, 530, 709, 1480
Cac8I GCNNGC 4 cut(s) 120, 234, 312, 1726
CciI TCATGA 1 cut(s) 894
CfoI GCGC 4 cut(s) 12, 238, 435, 867
Cfr13I GGNCC 5 cut(s) 28, 189, 213, 399, 793
Cfr9I CCCGGG 1 cut(s) 41
ClaI ATCGAT 1 cut(s) 499
CseI GACGC 3 cut(s) 186, 328, 1392
DdeI CTNAG 8 cut(s) 551, 657, 802, 816, 868, 1001, 1282, 1427
DinI GGCGCC 1 cut(s) 11
DriI GACNNNNNGTC 1 cut(s) 343
Eam1104I CTCTTC 5 cut(s) 131, 357, 1094, 1203, 1503
Eam1105I GACNNNNNGTC 1 cut(s) 343
EarI CTCTTC 5 cut(s) 131, 357, 1094, 1203, 1503
EciI GGCGGA 2 cut(s) 159, 273
Ecl136II GAGCTC 3 cut(s) 656, 820, 1268
Eco130I CCWWGG 1 cut(s) 216
Eco147I AGGCCT 1 cut(s) 289
Eco24I GRGCYC 6 cut(s) 634, 658, 822, 832, 1270, 1621
Eco31I GGTCTC 1 cut(s) 432
Eco47I GGWCC 2 cut(s) 28, 189
Eco47III AGCGCT 1 cut(s) 866
Eco53kI GAGCTC 3 cut(s) 656, 820, 1268
Eco57I CTGAAG 2 cut(s) 930, 1202
Eco88I CYCGRG 5 cut(s) 41, 436, 821, 1034, 1602
EcoICRI GAGCTC 3 cut(s) 656, 820, 1268
EcoNI CCTNNNNNAGG 1 cut(s) 608
EcoO109I RGGNCCY 1 cut(s) 189
EcoRII CCWGG 3 cut(s) 167, 185, 1142
EcoT14I CCWWGG 1 cut(s) 216
EcoT38I GRGCYC 6 cut(s) 634, 658, 822, 832, 1270, 1621
EgeI GGCGCC 1 cut(s) 11
EheI GGCGCC 1 cut(s) 11
ErhI CCWWGG 1 cut(s) 216
FalI AAGNNNNNCTT 6 cut(s) 1149, 1181, 1420, 1452, 1671, 1703
FaqI GGGAC 2 cut(s) 175, 462
FauI CCCGC 3 cut(s) 111, 201, 202
FokI GGATG 7 cut(s) 83, 383, 394, 505, 517, 716, 1487
FriOI GRGCYC 6 cut(s) 634, 658, 822, 832, 1270, 1621
FspBI CTAG 3 cut(s) 645, 666, 786
GlaI GCGC 4 cut(s) 11, 237, 434, 866
GsuI CTGGAG 2 cut(s) 594, 1600
HaeII RGCGCY 2 cut(s) 13, 868
HaeIII GGCC 4 cut(s) 215, 289, 401, 794
HapII CCGG 2 cut(s) 42, 293
HgaI GACGC 3 cut(s) 186, 328, 1392
HhaI GCGC 4 cut(s) 12, 238, 435, 867
Hin1I GRCGYC 1 cut(s) 10
Hin6I GCGC 4 cut(s) 10, 236, 433, 865
HinP1I GCGC 4 cut(s) 10, 236, 433, 865
HincII GTYRAC 1 cut(s) 1340
HindII GTYRAC 1 cut(s) 1340
HindIII AAGCTT 1 cut(s) 1018
HpaII CCGG 2 cut(s) 42, 293
HphI GGTGA 2 cut(s) 853, 1469
Hpy166II GTNNAC 1 cut(s) 1340
Hpy8I GTNNAC 1 cut(s) 1340
Hpy99I CGWCG 7 cut(s) 91, 94, 244, 322, 341, 349, 472
HpyAV CCTTC 7 cut(s) 262, 352, 382, 519, 694, 789, 999
HpyCH4III ACNGT 3 cut(s) 279, 476, 679
HpyCH4IV ACGT 3 cut(s) 339, 694, 725
HpyCH4V TGCA 9 cut(s) 520, 974, 1196, 1237, 1394, 1418, 1534, 1692, 1728
HpyF10VI GCNNNNNNNGC 4 cut(s) 255, 812, 871, 1595
HpyF3I CTNAG 8 cut(s) 551, 657, 802, 816, 868, 1001, 1282, 1427
HpySE526I ACGT 3 cut(s) 339, 694, 725
Hsp92I GRCGYC 1 cut(s) 10
HspAI GCGC 4 cut(s) 10, 236, 433, 865
KasI GGCGCC 1 cut(s) 9
LmnI GCTCC 4 cut(s) 937, 1624, 1697, 1745
Lsp1109I GCAGC 8 cut(s) 50, 612, 932, 943, 1239, 1303, 1430, 1585
LweI GCATC 2 cut(s) 1070, 1224
MaeI CTAG 3 cut(s) 645, 666, 786
MaeII ACGT 3 cut(s) 339, 694, 725
MbiI CCGCTC 1 cut(s) 376
MflI RGATCY 3 cut(s) 146, 182, 1606
MhlI GDGCHC 7 cut(s) 634, 658, 822, 832, 942, 1270, 1621
MluCI AATT 4 cut(s) 744, 1136, 1544, 1746
Mly113I GGCGCC 1 cut(s) 10
MlyI GAGTC 8 cut(s) 230, 626, 631, 655, 974, 1199, 1345, 1591
MmeI TCCRAC 2 cut(s) 661, 665
MseI TTAA 3 cut(s) 1071, 1152, 1547
MslI CAYNNNNRTG 2 cut(s) 594, 1455
MspI CCGG 2 cut(s) 42, 293
MspR9I CCNGG 5 cut(s) 42, 43, 169, 187, 1144
Mva1269I GAATGC 3 cut(s) 1318, 1508, 1534
MvaI CCWGG 3 cut(s) 169, 187, 1144
MvnI CGCG 3 cut(s) 197, 236, 1386
MwoI GCNNNNNNNGC 4 cut(s) 255, 812, 871, 1595
NarI GGCGCC 1 cut(s) 10
NciI CCSGG 2 cut(s) 42, 43
NcoI CCATGG 1 cut(s) 216
NlaIV GGNNCC 9 cut(s) 11, 148, 184, 191, 214, 1447, 1608, 1620, 1741
NmeAIII GCCGAG 4 cut(s) 30, 53, 309, 375
NspI RCATGY 2 cut(s) 815, 1728
NspV TTCGAA 1 cut(s) 266
PaeI GCATGC 1 cut(s) 1728
PaeR7I CTCGAG 1 cut(s) 821
PagI TCATGA 1 cut(s) 894
PceI AGGCCT 1 cut(s) 289
PcsI WCGNNNNNNNCGW 1 cut(s) 86
PctI GAATGC 3 cut(s) 1318, 1508, 1534
PfeI GAWTC 6 cut(s) 111, 124, 584, 684, 844, 1514
PflFI GACNNNGTC 1 cut(s) 724
PleI GAGTC 8 cut(s) 229, 625, 631, 655, 973, 1198, 1344, 1590
PluTI GGCGCC 1 cut(s) 13
PpsI GAGTC 8 cut(s) 229, 625, 631, 655, 973, 1198, 1344, 1590
PpuMI RGGWCCY 1 cut(s) 189
PshBI ATTAAT 1 cut(s) 1152
Psp124BI GAGCTC 3 cut(s) 658, 822, 1270
Psp5II RGGWCCY 1 cut(s) 189
Psp6I CCWGG 3 cut(s) 167, 185, 1142
PspGI CCWGG 3 cut(s) 167, 185, 1142
PspN4I GGNNCC 9 cut(s) 11, 148, 184, 191, 214, 1447, 1608, 1620, 1741
PspPI GGNCC 5 cut(s) 28, 189, 213, 399, 793
PspPPI RGGWCCY 1 cut(s) 189
PsuI RGATCY 3 cut(s) 146, 182, 1606
PsyI GACNNNGTC 1 cut(s) 724
RseI CAYNNNNRTG 2 cut(s) 594, 1455
SacI GAGCTC 3 cut(s) 658, 822, 1270
SaqAI TTAA 3 cut(s) 1071, 1152, 1547
Sau96I GGNCC 5 cut(s) 28, 189, 213, 399, 793
SchI GAGTC 8 cut(s) 230, 626, 631, 655, 974, 1199, 1345, 1591
ScrFI CCNGG 5 cut(s) 42, 43, 169, 187, 1144
SduI GDGCHC 7 cut(s) 634, 658, 822, 832, 942, 1270, 1621
SfaNI GCATC 2 cut(s) 1070, 1224
SfcI CTRYAG 2 cut(s) 106, 1593
SfoI GGCGCC 1 cut(s) 11
Sfr274I CTCGAG 1 cut(s) 821
SfuI TTCGAA 1 cut(s) 266
SinI GGWCC 2 cut(s) 28, 189
SlaI CTCGAG 1 cut(s) 821
SmaI CCCGGG 1 cut(s) 43
SmiMI CAYNNNNRTG 2 cut(s) 594, 1455
SmlI CTYRAG 5 cut(s) 821, 983, 1088, 1269, 1301
SmoI CTYRAG 5 cut(s) 821, 983, 1088, 1269, 1301
SphI GCATGC 1 cut(s) 1728
Sse9I AATT 4 cut(s) 744, 1136, 1544, 1746
SseBI AGGCCT 1 cut(s) 289
SspDI GGCGCC 1 cut(s) 9
SspMI CTAG 3 cut(s) 645, 666, 786
SstI GAGCTC 3 cut(s) 658, 822, 1270
StuI AGGCCT 1 cut(s) 289
StyD4I CCNGG 5 cut(s) 40, 41, 167, 185, 1142
StyI CCWWGG 1 cut(s) 216
TaaI ACNGT 3 cut(s) 279, 476, 679
TaiI ACGT 3 cut(s) 342, 697, 728
TaqI TCGA 8 cut(s) 92, 266, 499, 622, 650, 822, 963, 1215
TaqII GACCGA 1 cut(s) 414
TasI AATT 4 cut(s) 744, 1136, 1544, 1746
TauI GCSGC 4 cut(s) 252, 255, 258, 317
TfiI GAWTC 6 cut(s) 111, 124, 584, 684, 844, 1514
Tru1I TTAA 3 cut(s) 1071, 1152, 1547
Tru9I TTAA 3 cut(s) 1071, 1152, 1547
TseI GCWGC 8 cut(s) 63, 600, 920, 956, 1252, 1316, 1418, 1598
TspDTI ATGAA 7 cut(s) 347, 771, 783, 911, 1149, 1170, 1422
TspGWI ACGGA 1 cut(s) 456
TspMI CCCGGG 1 cut(s) 41
Tth111I GACNNNGTC 1 cut(s) 724
VpaK11BI GGWCC 2 cut(s) 28, 189
VspI ATTAAT 1 cut(s) 1152
XagI CCTNNNNNAGG 1 cut(s) 608
XapI RAATTY 1 cut(s) 1746
XceI RCATGY 2 cut(s) 815, 1728
XhoI CTCGAG 1 cut(s) 821
XmaI CCCGGG 1 cut(s) 41
XspI CTAG 3 cut(s) 645, 666, 786
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.