Prupe.7G103700_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
13331346 .. 13335757
4412 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G103700.2

Sequence Viewer

Length: 1407 bp
ATGGCGGAGCCAAAAGGCCGACCGGTTGGTGGCACAGAGACCAGCTGGTGTCGCGCCGTGCCTGGCGGCACCGGCATCACGGTGCTAGCCCTTCATGCCTCGAAACCCCCGGATGTGCTCAATCTCCAAACTGCCCTCCTGAAAGTCCAAAACTCCCACCCCATCCTCAACTCAAGGCTCCATACAAACCCCAAAACAAACACACTCTCCTTTGTCCCATCCCCCACTCCCTATGTCCAAATCAAATCGTTCAGCCTCTCATCAACTTTGGAAATCCTTGAAACCCTCTACAGCCCAATTAGCAACTCCTCAGTCTCTCCTTTTCACCTGATCCTTGAGCATGAGCTGAACCAAAACCCTTGGCAGCTGAAGAACACTACATGCACAACTGACCAAGACATGTTCTTCGCAAGCATCTATGCTCTGCCAAGCGCCATGTGGGTCGTGGCGCTGAGGCTTCATGTCTCAGCGTGTGACCGTACTTCAGCTGTGTCTTTGCTGAGAGAGGTGGTGGGGTTGATGGGTGGTGGAGACGAAGGGGGAGAGGTGAATATGGAAATTAGGAACGAAGGGGAGGTCAATTTGGGAATTGAGGATCTTATTCCAAGTGGGAAGGGTAAGAAGGCTATGTGGGTACGTGGAATGGACATGCTTAGTTACTCTGTTAATTCCCTGAGGCTGACCAATTTAAAATTCACCGACAACAAATCGGCTAGGGTTTCTCAGGTGGTGAGGCTGCAGATGAATGAAGATGACACTCAGAGGGTTCTCAATGGATGCAAGACAAGAGGGATTAAATTATGTGCAGCATTGGTGGCTGCTGGTTTGATGGCTGTGGATAAGTATCGTCTGGAAAATCAGAAGAAGTACGGTGTAGTGACACTCACTGATTGTCGATCCAATCTCCATCCAGCTCTTTCACATAAACATTTTGGATTTTACCACTCTGCCATCCTCAACACCCATACCACTAAAGGAGGAGAAACTCTATGGGAGCTGGCCAACAAAACCTACAAGGCCTTTGTGAGCTCTAAGAGGAACAACAAGCACTTCTCAGACATGGCTGACCTCAACTTCCTGATGTGCAAGGCCATCGACAACCCTACCTTGACCTCATCATCTTCCTTAAGAGCATCGTTCATGTCAGTGTTTGAGGACCCAGTGATTGATGATTCAAACGACAAGCAGAGAGAGCTAGGCCTGGGGTTGGAGGAATACATGGGGTGTGCTTCAGTGCATGGCATTGGCCCATCCATTGCAATCTTCGACACCATCAGAGATGGACGGTTGGATTGTGTTTGCGTGTACCCAGCACCATTGCACTCGAGAGAGCAAATGCAAGGCTTGGTTGATGACATGAAGGCAATGCTTGTGGGTTGTGATGGCAATGTAGAACGGAAGATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

469

Amino Acids

51.47

Weight (kDa)

7.2

Isoelectric Point (pI)

33.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0014060)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 68
AccII CGCG 1 cut(s) 54
AciI CCGC 2 cut(s) 5, 66
AclWI GGATC 3 cut(s) 325, 603, 891
AcoI YGGCCR 1 cut(s) 999
AcsI RAATTY 1 cut(s) 692
AcuI CTGAAG 3 cut(s) 389, 468, 1215
AfaI GTAC 4 cut(s) 481, 636, 869, 1307
AfiI CCNNNNNNNGG 2 cut(s) 29, 1207
AflII CTTAAG 1 cut(s) 1126
AflIII ACRYGT 1 cut(s) 399
AgeI ACCGGT 1 cut(s) 22
AgsI TTSAA 2 cut(s) 281, 1176
AjnI CCWGG 2 cut(s) 61, 1200
AjuI GAANNNNNNNTTGG 2 cut(s) 677, 709
AluBI AGCT 8 cut(s) 45, 346, 367, 488, 914, 997, 1029, 1195
AluI AGCT 8 cut(s) 45, 346, 367, 488, 914, 997, 1029, 1195
Alw21I GWGCWC 2 cut(s) 120, 1031
Alw26I GTCTC 4 cut(s) 32, 319, 469, 525
AlwI GGATC 3 cut(s) 325, 603, 891
Ama87I CYCGRG 1 cut(s) 1324
AoxI GGCC 6 cut(s) 16, 999, 1017, 1089, 1198, 1246
ApeKI GCWGC 4 cut(s) 364, 736, 806, 818
ApoI RAATTY 1 cut(s) 692
ArsI GACNNNNNNTTYG 4 cut(s) 389, 421, 561, 593
AsiGI ACCGGT 1 cut(s) 22
AspLEI GCGC 3 cut(s) 56, 434, 451
AspS9I GGNCC 2 cut(s) 1156, 1247
AsuC2I CCSGG 1 cut(s) 110
AsuHPI GGTGA 4 cut(s) 317, 559, 688, 742
AsuNHI GCTAGC 1 cut(s) 85
AvaI CYCGRG 1 cut(s) 1324
AvaII GGWCC 1 cut(s) 1156
AxyI CCTNAGG 1 cut(s) 674
BalI TGGCCA 1 cut(s) 1001
BanI GGYRCC 1 cut(s) 68
BanII GRGCYC 1 cut(s) 1031
Bbv12I GWGCWC 2 cut(s) 120, 1031
BbvCI CCTCAGC 1 cut(s) 452
BbvI GCAGC 4 cut(s) 376, 723, 805, 818
BceAI ACGGC 1 cut(s) 41
BcgI CGANNNNNNTGC 2 cut(s) 1075, 1109
BciT130I CCWGG 2 cut(s) 63, 1202
BcnI CCSGG 1 cut(s) 110
BcoDI GTCTC 4 cut(s) 32, 319, 469, 525
BfaI CTAG 3 cut(s) 86, 714, 1196
BfmI CTRYAG 2 cut(s) 289, 737
BfoI RGCGCY 2 cut(s) 435, 452
BfrI CTTAAG 1 cut(s) 1126
BglII AGATCT 1 cut(s) 1401
BisI GCNGC 5 cut(s) 67, 365, 737, 807, 819
BlsI GCNGC 5 cut(s) 68, 366, 738, 808, 820
Bme1390I CCNGG 3 cut(s) 63, 110, 1202
Bme18I GGWCC 1 cut(s) 1156
BmeT110I CYCGRG 1 cut(s) 1324
BmgT120I GGNCC 2 cut(s) 1156, 1247
BmiI GGNNCC 4 cut(s) 9, 70, 179, 1158
BmrFI CCNGG 3 cut(s) 63, 110, 1202
BmrI ACTGGG 1 cut(s) 1154
BmsI GCATC 4 cut(s) 84, 423, 767, 1142
BmtI GCTAGC 1 cut(s) 89
BmuI ACTGGG 1 cut(s) 1154
Bpu10I CCTNAGC 1 cut(s) 452
BpuEI CTTGAG 2 cut(s) 157, 356
BpuMI CCSGG 1 cut(s) 110
BsaAI YACGTR 1 cut(s) 638
BsaBI GATNNNNATC 1 cut(s) 843
BsaI GGTCTC 1 cut(s) 32
BsaJI CCNNGG 3 cut(s) 108, 359, 1201
BsaWI WCCGGW 1 cut(s) 22
BsaXI ACNNNNNCTCC 2 cut(s) 191, 221
Bsc4I CCNNNNNNNGG 2 cut(s) 29, 1207
Bse118I RCCGGY 2 cut(s) 22, 71
Bse1I ACTGG 1 cut(s) 1160
Bse21I CCTNAGG 1 cut(s) 674
Bse3DI GCAATG 4 cut(s) 1254, 1316, 1371, 1393
Bse8I GATNNNNATC 1 cut(s) 843
BseBI CCWGG 2 cut(s) 63, 1202
BseDI CCNNGG 3 cut(s) 108, 359, 1201
BseGI GGATG 7 cut(s) 118, 162, 218, 782, 907, 951, 1250
BseJI GATNNNNATC 1 cut(s) 843
BseLI CCNNNNNNNGG 2 cut(s) 29, 1207
BseMI GCAATG 4 cut(s) 1254, 1316, 1371, 1393
BseMII CTCAG 8 cut(s) 324, 443, 480, 491, 665, 737, 773, 1068
BseNI ACTGG 1 cut(s) 1160
BseRI GAGGAG 2 cut(s) 298, 993
BseXI GCAGC 4 cut(s) 376, 723, 805, 818
BseYI CCCAGC 1 cut(s) 1309
BsgI GTGCAG 1 cut(s) 825
Bsh1236I CGCG 1 cut(s) 54
Bsh1285I CGRYCG 1 cut(s) 23
BshFI GGCC 6 cut(s) 18, 1001, 1019, 1091, 1200, 1248
BshNI GGYRCC 1 cut(s) 68
BshTI ACCGGT 1 cut(s) 22
BsiEI CGRYCG 1 cut(s) 23
BsiHKAI GWGCWC 2 cut(s) 120, 1031
BsiHKCI CYCGRG 1 cut(s) 1324
BsiSI CCGG 3 cut(s) 23, 72, 110
BslFI GGGAC 1 cut(s) 200
BslI CCNNNNNNNGG 2 cut(s) 29, 1207
BsmAI GTCTC 4 cut(s) 32, 319, 469, 525
BsmBI CGTCTC 1 cut(s) 525
BsmFI GGGAC 1 cut(s) 200
BsnI GGCC 6 cut(s) 18, 1001, 1019, 1091, 1200, 1248
Bso31I GGTCTC 1 cut(s) 32
BsoBI CYCGRG 1 cut(s) 1324
Bsp1286I GDGCHC 2 cut(s) 120, 1031
Bsp143I GATC 4 cut(s) 330, 595, 896, 1401
BspACI CCGC 2 cut(s) 5, 66
BspANI GGCC 6 cut(s) 18, 1001, 1019, 1091, 1200, 1248
BspCNI CTCAG 8 cut(s) 323, 444, 479, 492, 666, 736, 772, 1067
BspFNI CGCG 1 cut(s) 54
BspLI GGNNCC 4 cut(s) 9, 70, 179, 1158
BspMAI CTGCAG 1 cut(s) 741
BspOI GCTAGC 1 cut(s) 89
BspPI GGATC 3 cut(s) 325, 603, 891
BspT107I GGYRCC 1 cut(s) 68
BspTI CTTAAG 1 cut(s) 1126
BspTNI GGTCTC 1 cut(s) 32
BsrDI GCAATG 4 cut(s) 1254, 1316, 1371, 1393
BsrFI RCCGGY 2 cut(s) 22, 71
BsrI ACTGG 1 cut(s) 1160
BssAI RCCGGY 2 cut(s) 22, 71
BssECI CCNNGG 3 cut(s) 108, 359, 1201
BssMI GATC 4 cut(s) 330, 595, 896, 1401
BssT1I CCWWGG 1 cut(s) 359
Bst2UI CCWGG 2 cut(s) 63, 1202
Bst4CI ACNGT 4 cut(s) 82, 479, 872, 1287
BstAFI CTTAAG 1 cut(s) 1126
BstBAI YACGTR 1 cut(s) 638
BstC8I GCNNGC 3 cut(s) 87, 412, 999
BstF5I GGATG 7 cut(s) 118, 162, 218, 782, 907, 951, 1250
BstFNI CGCG 1 cut(s) 54
BstH2I RGCGCY 2 cut(s) 435, 452
BstHHI GCGC 3 cut(s) 56, 434, 451
BstKTI GATC 4 cut(s) 333, 598, 899, 1404
BstMAI GTCTC 4 cut(s) 32, 319, 469, 525
BstMBI GATC 4 cut(s) 330, 595, 896, 1401
BstMCI CGRYCG 1 cut(s) 23
BstMWI GCNNNNNNNGC 6 cut(s) 51, 72, 95, 300, 815, 1192
BstNI CCWGG 2 cut(s) 63, 1202
BstNSI RCATGY 3 cut(s) 384, 403, 652
BstSCI CCNGG 3 cut(s) 61, 108, 1200
BstSFI CTRYAG 2 cut(s) 289, 737
BstUI CGCG 1 cut(s) 54
BstV1I GCAGC 4 cut(s) 376, 723, 805, 818
BstX2I RGATCY 2 cut(s) 595, 1401
BstYI RGATCY 2 cut(s) 595, 1401
Bsu36I CCTNAGG 1 cut(s) 674
BsuRI GGCC 6 cut(s) 18, 1001, 1019, 1091, 1200, 1248
BtsCI GGATG 7 cut(s) 118, 162, 218, 782, 907, 951, 1250
BtsIMutI CAGTG 4 cut(s) 885, 1152, 1167, 1239
Cac8I GCNNGC 3 cut(s) 87, 412, 999
CfoI GCGC 3 cut(s) 56, 434, 451
Cfr10I RCCGGY 2 cut(s) 22, 71
Cfr13I GGNCC 2 cut(s) 1156, 1247
Csp6I GTAC 4 cut(s) 480, 635, 868, 1306
CspAI ACCGGT 1 cut(s) 22
CspCI CAANNNNNGTGG 2 cut(s) 1353, 1388
CviQI GTAC 4 cut(s) 480, 635, 868, 1306
DpnI GATC 4 cut(s) 332, 597, 898, 1403
DpnII GATC 4 cut(s) 330, 595, 896, 1401
DraI TTTAAA 1 cut(s) 690
EaeI YGGCCR 1 cut(s) 999
EciI GGCGGA 1 cut(s) 20
Ecl136II GAGCTC 1 cut(s) 1029
Eco130I CCWWGG 1 cut(s) 359
Eco147I AGGCCT 2 cut(s) 1019, 1200
Eco24I GRGCYC 1 cut(s) 1031
Eco31I GGTCTC 1 cut(s) 32
Eco47I GGWCC 1 cut(s) 1156
Eco53kI GAGCTC 1 cut(s) 1029
Eco57I CTGAAG 3 cut(s) 389, 468, 1215
Eco81I CCTNAGG 1 cut(s) 674
Eco88I CYCGRG 1 cut(s) 1324
EcoICRI GAGCTC 1 cut(s) 1029
EcoO109I RGGNCCY 1 cut(s) 1156
EcoRII CCWGG 2 cut(s) 61, 1200
EcoT14I CCWWGG 1 cut(s) 359
EcoT38I GRGCYC 1 cut(s) 1031
ErhI CCWWGG 1 cut(s) 359
Esp3I CGTCTC 1 cut(s) 525
FaqI GGGAC 1 cut(s) 200
Fnu4HI GCNGC 5 cut(s) 67, 365, 737, 807, 819
FokI GGATG 7 cut(s) 125, 149, 205, 789, 894, 938, 1237
FriOI GRGCYC 1 cut(s) 1031
Fsp4HI GCNGC 5 cut(s) 67, 365, 737, 807, 819
FspBI CTAG 3 cut(s) 86, 714, 1196
GlaI GCGC 3 cut(s) 55, 433, 450
GluI GCNGC 5 cut(s) 67, 365, 737, 807, 819
GsaI CCCAGC 1 cut(s) 1313
HaeII RGCGCY 2 cut(s) 435, 452
HaeIII GGCC 6 cut(s) 18, 1001, 1019, 1091, 1200, 1248
HapII CCGG 3 cut(s) 23, 72, 110
HhaI GCGC 3 cut(s) 56, 434, 451
Hin6I GCGC 3 cut(s) 54, 432, 449
HinP1I GCGC 3 cut(s) 54, 432, 449
HinfI GANTC 1 cut(s) 1172
HpaII CCGG 3 cut(s) 23, 72, 110
HphI GGTGA 4 cut(s) 317, 559, 688, 742
Hpy166II GTNNAC 1 cut(s) 1306
Hpy188I TCNGA 4 cut(s) 762, 861, 1057, 1277
Hpy188III TCNNGA 4 cut(s) 139, 851, 1078, 1326
Hpy8I GTNNAC 1 cut(s) 1306
HpyAV CCTTC 6 cut(s) 101, 530, 563, 607, 616, 1354
HpyCH4III ACNGT 4 cut(s) 82, 479, 872, 1287
HpyCH4IV ACGT 1 cut(s) 637
HpyCH4V TGCA 9 cut(s) 384, 739, 780, 806, 1086, 1237, 1259, 1321, 1339
HpyF10VI GCNNNNNNNGC 6 cut(s) 51, 72, 95, 300, 815, 1192
HpySE526I ACGT 1 cut(s) 637
HspAI GCGC 3 cut(s) 54, 432, 449
Kzo9I GATC 4 cut(s) 330, 595, 896, 1401
LmnI GCTCC 3 cut(s) 7, 183, 994
Lsp1109I GCAGC 4 cut(s) 376, 723, 805, 818
LweI GCATC 4 cut(s) 84, 423, 767, 1142
MaeI CTAG 3 cut(s) 86, 714, 1196
MaeII ACGT 1 cut(s) 637
MaeIII GTNAC 3 cut(s) 473, 656, 877
MalI GATC 4 cut(s) 332, 597, 898, 1403
MboI GATC 4 cut(s) 330, 595, 896, 1401
MboII GAAGA 6 cut(s) 382, 397, 761, 874, 1113, 1255
MflI RGATCY 2 cut(s) 595, 1401
MhlI GDGCHC 2 cut(s) 120, 1031
MlsI TGGCCA 1 cut(s) 1001
MluCI AATT 8 cut(s) 297, 558, 580, 588, 667, 685, 692, 797
MluNI TGGCCA 1 cut(s) 1001
MmeI TCCRAC 2 cut(s) 1188, 1269
Mox20I TGGCCA 1 cut(s) 1001
MscI TGGCCA 1 cut(s) 1001
MseI TTAA 4 cut(s) 666, 689, 795, 1127
MslI CAYNNNNRTG 2 cut(s) 80, 1145
Msp20I TGGCCA 1 cut(s) 1001
MspA1I CMGCKG 3 cut(s) 45, 367, 488
MspCI CTTAAG 1 cut(s) 1126
MspI CCGG 3 cut(s) 23, 72, 110
MspR9I CCNGG 3 cut(s) 63, 110, 1202
MvaI CCWGG 2 cut(s) 63, 1202
MvnI CGCG 1 cut(s) 54
MwoI GCNNNNNNNGC 6 cut(s) 51, 72, 95, 300, 815, 1192
NciI CCSGG 1 cut(s) 110
NdeII GATC 4 cut(s) 330, 595, 896, 1401
NheI GCTAGC 1 cut(s) 85
NlaIV GGNNCC 4 cut(s) 9, 70, 179, 1158
NmuCI GTSAC 2 cut(s) 473, 877
NspI RCATGY 3 cut(s) 384, 403, 652
PaeR7I CTCGAG 1 cut(s) 1324
PceI AGGCCT 2 cut(s) 1019, 1200
PciI ACATGT 1 cut(s) 399
PfeI GAWTC 1 cut(s) 1172
PinAI ACCGGT 1 cut(s) 22
PkrI GCNGC 5 cut(s) 68, 366, 738, 808, 820
Ppu21I YACGTR 1 cut(s) 638
PpuMI RGGWCCY 1 cut(s) 1156
PscI ACATGT 1 cut(s) 399
Psp124BI GAGCTC 1 cut(s) 1031
Psp5II RGGWCCY 1 cut(s) 1156
Psp6I CCWGG 2 cut(s) 61, 1200
PspFI CCCAGC 1 cut(s) 1309
PspGI CCWGG 2 cut(s) 61, 1200
PspN4I GGNNCC 4 cut(s) 9, 70, 179, 1158
PspPI GGNCC 2 cut(s) 1156, 1247
PspPPI RGGWCCY 1 cut(s) 1156
PstI CTGCAG 1 cut(s) 741
PsuI RGATCY 2 cut(s) 595, 1401
PvuII CAGCTG 3 cut(s) 45, 367, 488
RsaI GTAC 4 cut(s) 481, 636, 869, 1307
RsaNI GTAC 4 cut(s) 480, 635, 868, 1306
RseI CAYNNNNRTG 2 cut(s) 80, 1145
SacI GAGCTC 1 cut(s) 1031
SaqAI TTAA 4 cut(s) 666, 689, 795, 1127
SatI GCNGC 5 cut(s) 67, 365, 737, 807, 819
Sau3AI GATC 4 cut(s) 330, 595, 896, 1401
Sau96I GGNCC 2 cut(s) 1156, 1247
ScrFI CCNGG 3 cut(s) 63, 110, 1202
SduI GDGCHC 2 cut(s) 120, 1031
SfaNI GCATC 4 cut(s) 84, 423, 767, 1142
SfcI CTRYAG 2 cut(s) 289, 737
Sfr274I CTCGAG 1 cut(s) 1324
SinI GGWCC 1 cut(s) 1156
SlaI CTCGAG 1 cut(s) 1324
SmiMI CAYNNNNRTG 2 cut(s) 80, 1145
SmlI CTYRAG 4 cut(s) 172, 335, 1126, 1324
SmoI CTYRAG 4 cut(s) 172, 335, 1126, 1324
Sse9I AATT 8 cut(s) 297, 558, 580, 588, 667, 685, 692, 797
SseBI AGGCCT 2 cut(s) 1019, 1200
SsiI CCGC 2 cut(s) 5, 66
SspMI CTAG 3 cut(s) 86, 714, 1196
SstI GAGCTC 1 cut(s) 1031
StuI AGGCCT 2 cut(s) 1019, 1200
StyD4I CCNGG 3 cut(s) 61, 108, 1200
StyI CCWWGG 1 cut(s) 359
TaaI ACNGT 4 cut(s) 82, 479, 872, 1287
TaiI ACGT 1 cut(s) 640
TaqI TCGA 5 cut(s) 101, 895, 1095, 1266, 1325
TasI AATT 8 cut(s) 297, 558, 580, 588, 667, 685, 692, 797
TauI GCSGC 1 cut(s) 69
TfiI GAWTC 1 cut(s) 1172
Tru1I TTAA 4 cut(s) 666, 689, 795, 1127
Tru9I TTAA 4 cut(s) 666, 689, 795, 1127
TscAI CASTG 4 cut(s) 892, 1152, 1167, 1239
TseFI GTSAC 2 cut(s) 473, 877
TseI GCWGC 4 cut(s) 364, 736, 806, 818
Tsp45I GTSAC 2 cut(s) 473, 877
TspDTI ATGAA 6 cut(s) 83, 449, 758, 762, 1129, 1373
TspRI CASTG 4 cut(s) 892, 1152, 1167, 1239
Vha464I CTTAAG 1 cut(s) 1126
VpaK11BI GGWCC 1 cut(s) 1156
XapI RAATTY 1 cut(s) 692
XceI RCATGY 3 cut(s) 384, 403, 652
XcmI CCANNNNNNNNNTGG 2 cut(s) 435, 442
XhoI CTCGAG 1 cut(s) 1324
XspI CTAG 3 cut(s) 86, 714, 1196
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.