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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G52610 |
| fragaria_vesca | FvH4_6g19190 |
| malus_domestica | MD12G1027700.v1.1 |
| prunus_persica | Prupe.7G103700_v2.0.a1 Prupe.7G103700_v2.0.a1 Prupe.7G103900_v2.0.a1 |
| pyrus_communis | pycom12g02650 |
| rosa_chinensis | RchiOBHm_Chr3g0474311 |
| rosa_laevigata | RLG00000023933 |
| rosa_multiflora | Rmu_sc0004507.1_g000012 |
| rosa_roxburghii | Rroxscaffold_6G00407370 |
| rosa_rugosa | Rorug03G0140000 |
| rosa_samantha | Rh3AG190700 Rh3BG219900 Rh3CG215100 Rh3DG215600 |
| rosa_wichuraiana | Rw3G017400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 239 |
| AccB1I | GGYRCC | 3 cut(s) | 107, 239, 1061 |
| AccBSI | CCGCTC | 2 cut(s) | 210, 506 |
| AccII | CGCG | 3 cut(s) | 446, 460, 658 |
| AclWI | GGATC | 4 cut(s) | 349, 616, 932, 1035 |
| AcoI | YGGCCR | 3 cut(s) | 510, 516, 926 |
| AcsI | RAATTY | 2 cut(s) | 190, 688 |
| AcuI | CTGAAG | 2 cut(s) | 545, 1242 |
| AcvI | CACGTG | 1 cut(s) | 384 |
| AfaI | GTAC | 4 cut(s) | 241, 443, 468, 680 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 68, 69, 236, 304, 406, 508, 1153 |
| AflIII | ACRYGT | 3 cut(s) | 381, 486, 1047 |
| AgeI | ACCGGT | 1 cut(s) | 236 |
| AgsI | TTSAA | 5 cut(s) | 379, 547, 688, 1130, 1318 |
| AjiI | CACGTC | 5 cut(s) | 424, 489, 670, 724, 1050 |
| AjnI | CCWGG | 3 cut(s) | 708, 744, 1135 |
| AleI | CACNNNNGTG | 1 cut(s) | 422 |
| AluBI | AGCT | 7 cut(s) | 79, 84, 532, 839, 874, 1228, 1431 |
| AluI | AGCT | 7 cut(s) | 79, 84, 532, 839, 874, 1228, 1431 |
| Alw21I | GWGCWC | 4 cut(s) | 81, 366, 440, 477 |
| Alw26I | GTCTC | 3 cut(s) | 136, 582, 1344 |
| AlwI | GGATC | 4 cut(s) | 349, 616, 932, 1035 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 842 |
| Ama87I | CYCGRG | 2 cut(s) | 139, 962 |
| AoxI | GGCC | 4 cut(s) | 510, 516, 926, 1273 |
| ApeKI | GCWGC | 7 cut(s) | 532, 535, 787, 836, 839, 854, 871 |
| ApoI | RAATTY | 2 cut(s) | 190, 688 |
| AsiGI | ACCGGT | 1 cut(s) | 236 |
| Asp718I | GGTACC | 1 cut(s) | 239 |
| AspLEI | GCGC | 3 cut(s) | 658, 741, 1256 |
| AspS9I | GGNCC | 2 cut(s) | 1274, 1378 |
| AsuHPI | GGTGA | 3 cut(s) | 263, 610, 763 |
| AsuII | TTCGAA | 1 cut(s) | 1352 |
| AvaI | CYCGRG | 2 cut(s) | 139, 962 |
| AvaII | GGWCC | 1 cut(s) | 1378 |
| BanI | GGYRCC | 3 cut(s) | 107, 239, 1061 |
| BanII | GRGCYC | 3 cut(s) | 51, 81, 770 |
| BauI | CACGAG | 1 cut(s) | 365 |
| BbrPI | CACGTG | 1 cut(s) | 384 |
| Bbv12I | GWGCWC | 4 cut(s) | 81, 366, 440, 477 |
| BbvCI | CCTCAGC | 1 cut(s) | 695 |
| BbvI | GCAGC | 7 cut(s) | 519, 522, 774, 826, 841, 848, 883 |
| BccI | CCATC | 6 cut(s) | 209, 307, 989, 1156, 1301, 1369 |
| BceAI | ACGGC | 6 cut(s) | 80, 271, 321, 497, 503, 631 |
| BciT130I | CCWGG | 3 cut(s) | 710, 746, 1137 |
| BclI | TGATCA | 1 cut(s) | 16 |
| BcoDI | GTCTC | 3 cut(s) | 136, 582, 1344 |
| BfaI | CTAG | 5 cut(s) | 102, 125, 807, 1209, 1432 |
| BfoI | RGCGCY | 1 cut(s) | 742 |
| BlpI | GCTNAGC | 1 cut(s) | 80 |
| Bme1390I | CCNGG | 3 cut(s) | 710, 746, 1137 |
| Bme18I | GGWCC | 1 cut(s) | 1378 |
| BmeT110I | CYCGRG | 2 cut(s) | 139, 962 |
| BmgBI | CACGTC | 5 cut(s) | 424, 489, 670, 724, 1050 |
| BmgT120I | GGNCC | 2 cut(s) | 1274, 1378 |
| BmiI | GGNNCC | 7 cut(s) | 48, 109, 241, 309, 829, 1063, 1276 |
| BmrFI | CCNGG | 3 cut(s) | 710, 746, 1137 |
| BmsI | GCATC | 3 cut(s) | 358, 1031, 1301 |
| BpmI | CTGGAG | 1 cut(s) | 731 |
| Bpu10I | CCTNAGC | 1 cut(s) | 695 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 80 |
| Bpu14I | TTCGAA | 1 cut(s) | 1352 |
| BpuEI | CTTGAG | 1 cut(s) | 380 |
| BsaAI | YACGTR | 3 cut(s) | 384, 441, 1304 |
| BsaI | GGTCTC | 1 cut(s) | 136 |
| BsaJI | CCNNGG | 5 cut(s) | 513, 744, 831, 1135, 1264 |
| BsaWI | WCCGGW | 1 cut(s) | 236 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 459, 489, 533, 563 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 68, 69, 236, 304, 406, 508, 1153 |
| Bse118I | RCCGGY | 3 cut(s) | 110, 236, 1058 |
| Bse1I | ACTGG | 1 cut(s) | 474 |
| Bse3DI | GCAATG | 3 cut(s) | 45, 1164, 1343 |
| BseBI | CCWGG | 3 cut(s) | 710, 746, 1137 |
| BseDI | CCNNGG | 5 cut(s) | 513, 744, 831, 1135, 1264 |
| BseGI | GGATG | 4 cut(s) | 19, 201, 1316, 1420 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 68, 69, 236, 304, 406, 508, 1153 |
| BseMI | GCAATG | 3 cut(s) | 45, 1164, 1343 |
| BseMII | CTCAG | 4 cut(s) | 66, 94, 686, 1191 |
| BseNI | ACTGG | 1 cut(s) | 474 |
| BseRI | GAGGAG | 4 cut(s) | 122, 125, 576, 608 |
| BseX3I | CGGCCG | 1 cut(s) | 510 |
| BseXI | GCAGC | 7 cut(s) | 519, 522, 774, 826, 841, 848, 883 |
| BseYI | CCCAGC | 1 cut(s) | 673 |
| BsgI | GTGCAG | 1 cut(s) | 467 |
| Bsh1236I | CGCG | 3 cut(s) | 446, 460, 658 |
| Bsh1285I | CGRYCG | 2 cut(s) | 502, 513 |
| BshFI | GGCC | 4 cut(s) | 512, 518, 928, 1275 |
| BshNI | GGYRCC | 3 cut(s) | 107, 239, 1061 |
| BshTI | ACCGGT | 1 cut(s) | 236 |
| BsiEI | CGRYCG | 2 cut(s) | 502, 513 |
| BsiHKAI | GWGCWC | 4 cut(s) | 81, 366, 440, 477 |
| BsiHKCI | CYCGRG | 2 cut(s) | 139, 962 |
| BsiSI | CCGG | 4 cut(s) | 44, 111, 237, 1059 |
| BsiWI | CGTACG | 1 cut(s) | 441 |
| BslFI | GGGAC | 1 cut(s) | 85 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 68, 69, 236, 304, 406, 508, 1153 |
| BsmAI | GTCTC | 3 cut(s) | 136, 582, 1344 |
| BsmBI | CGTCTC | 2 cut(s) | 582, 1344 |
| BsmFI | GGGAC | 1 cut(s) | 85 |
| BsmI | GAATGC | 2 cut(s) | 1348, 1392 |
| BsnI | GGCC | 4 cut(s) | 512, 518, 928, 1275 |
| Bso31I | GGTCTC | 1 cut(s) | 136 |
| BsoBI | CYCGRG | 2 cut(s) | 139, 962 |
| Bsp119I | TTCGAA | 1 cut(s) | 1352 |
| Bsp1286I | GDGCHC | 6 cut(s) | 51, 81, 366, 440, 477, 770 |
| Bsp143I | GATC | 7 cut(s) | 16, 292, 354, 621, 880, 937, 1027 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 80 |
| Bsp19I | CCATGG | 1 cut(s) | 1264 |
| BspANI | GGCC | 4 cut(s) | 512, 518, 928, 1275 |
| BspCNI | CTCAG | 4 cut(s) | 67, 93, 687, 1190 |
| BspFNI | CGCG | 3 cut(s) | 446, 460, 658 |
| BspHI | TCATGA | 1 cut(s) | 984 |
| BspLI | GGNNCC | 7 cut(s) | 48, 109, 241, 309, 829, 1063, 1276 |
| BspPI | GGATC | 4 cut(s) | 349, 616, 932, 1035 |
| BspQI | GCTCTTC | 1 cut(s) | 1382 |
| BspT104I | TTCGAA | 1 cut(s) | 1352 |
| BspT107I | GGYRCC | 3 cut(s) | 107, 239, 1061 |
| BspTNI | GGTCTC | 1 cut(s) | 136 |
| BsrBI | CCGCTC | 2 cut(s) | 210, 506 |
| BsrDI | GCAATG | 3 cut(s) | 45, 1164, 1343 |
| BsrFI | RCCGGY | 3 cut(s) | 110, 236, 1058 |
| BsrI | ACTGG | 1 cut(s) | 474 |
| BssAI | RCCGGY | 3 cut(s) | 110, 236, 1058 |
| BssECI | CCNNGG | 5 cut(s) | 513, 744, 831, 1135, 1264 |
| BssMI | GATC | 7 cut(s) | 16, 292, 354, 621, 880, 937, 1027 |
| BssSI | CACGAG | 1 cut(s) | 365 |
| BssT1I | CCWWGG | 2 cut(s) | 831, 1264 |
| Bst2BI | CACGAG | 1 cut(s) | 365 |
| Bst2UI | CCWGG | 3 cut(s) | 710, 746, 1137 |
| Bst4CI | ACNGT | 5 cut(s) | 121, 762, 1195, 1322, 1406 |
| Bst6I | CTCTTC | 1 cut(s) | 1382 |
| BstBAI | YACGTR | 3 cut(s) | 384, 441, 1304 |
| BstBI | TTCGAA | 1 cut(s) | 1352 |
| BstC8I | GCNNGC | 4 cut(s) | 436, 482, 496, 792 |
| BstDEI | CTNAG | 5 cut(s) | 75, 80, 695, 867, 1177 |
| BstDSI | CCRYGG | 2 cut(s) | 513, 1264 |
| BstF5I | GGATG | 4 cut(s) | 19, 201, 1316, 1420 |
| BstFNI | CGCG | 3 cut(s) | 446, 460, 658 |
| BstH2I | RGCGCY | 1 cut(s) | 742 |
| BstHHI | GCGC | 3 cut(s) | 658, 741, 1256 |
| BstKTI | GATC | 7 cut(s) | 19, 295, 357, 624, 883, 940, 1030 |
| BstMAI | GTCTC | 3 cut(s) | 136, 582, 1344 |
| BstMBI | GATC | 7 cut(s) | 16, 292, 354, 621, 880, 937, 1027 |
| BstMCI | CGRYCG | 2 cut(s) | 502, 513 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 111, 481, 515, 529, 836, 860, 1389 |
| BstNI | CCWGG | 3 cut(s) | 710, 746, 1137 |
| BstNSI | RCATGY | 1 cut(s) | 498 |
| BstSCI | CCNGG | 3 cut(s) | 708, 744, 1135 |
| BstUI | CGCG | 3 cut(s) | 446, 460, 658 |
| BstV1I | GCAGC | 7 cut(s) | 519, 522, 774, 826, 841, 848, 883 |
| BstX2I | RGATCY | 2 cut(s) | 354, 1027 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1271 |
| BstYI | RGATCY | 2 cut(s) | 354, 1027 |
| BstZI | CGGCCG | 1 cut(s) | 510 |
| BsuRI | GGCC | 4 cut(s) | 512, 518, 928, 1275 |
| BtgI | CCRYGG | 2 cut(s) | 513, 1264 |
| BtrI | CACGTC | 5 cut(s) | 424, 489, 670, 724, 1050 |
| BtsCI | GGATG | 4 cut(s) | 19, 201, 1316, 1420 |
| BtsIMutI | CAGTG | 1 cut(s) | 1185 |
| Cac8I | GCNNGC | 4 cut(s) | 436, 482, 496, 792 |
| CaiI | CAGNNNCTG | 1 cut(s) | 842 |
| CciI | TCATGA | 1 cut(s) | 984 |
| CfoI | GCGC | 3 cut(s) | 658, 741, 1256 |
| Cfr10I | RCCGGY | 3 cut(s) | 110, 236, 1058 |
| Cfr13I | GGNCC | 2 cut(s) | 1274, 1378 |
| Csp6I | GTAC | 4 cut(s) | 240, 442, 467, 679 |
| CspAI | ACCGGT | 1 cut(s) | 236 |
| CviAII | CATG | 7 cut(s) | 495, 985, 995, 1093, 1114, 1265, 1384 |
| CviQI | GTAC | 4 cut(s) | 240, 442, 467, 679 |
| DdeI | CTNAG | 5 cut(s) | 75, 80, 695, 867, 1177 |
| DpnI | GATC | 7 cut(s) | 18, 294, 356, 623, 882, 939, 1029 |
| DpnII | GATC | 7 cut(s) | 16, 292, 354, 621, 880, 937, 1027 |
| EaeI | YGGCCR | 3 cut(s) | 510, 516, 926 |
| EagI | CGGCCG | 1 cut(s) | 510 |
| Eam1104I | CTCTTC | 1 cut(s) | 1382 |
| EarI | CTCTTC | 1 cut(s) | 1382 |
| EciI | GGCGGA | 1 cut(s) | 467 |
| Ecl136II | GAGCTC | 1 cut(s) | 79 |
| EclXI | CGGCCG | 1 cut(s) | 510 |
| Eco130I | CCWWGG | 2 cut(s) | 831, 1264 |
| Eco24I | GRGCYC | 3 cut(s) | 51, 81, 770 |
| Eco31I | GGTCTC | 1 cut(s) | 136 |
| Eco47I | GGWCC | 1 cut(s) | 1378 |
| Eco52I | CGGCCG | 1 cut(s) | 510 |
| Eco53kI | GAGCTC | 1 cut(s) | 79 |
| Eco57I | CTGAAG | 2 cut(s) | 545, 1242 |
| Eco72I | CACGTG | 1 cut(s) | 384 |
| Eco88I | CYCGRG | 2 cut(s) | 139, 962 |
| EcoICRI | GAGCTC | 1 cut(s) | 79 |
| EcoRI | GAATTC | 1 cut(s) | 688 |
| EcoRII | CCWGG | 3 cut(s) | 708, 744, 1135 |
| EcoT14I | CCWWGG | 2 cut(s) | 831, 1264 |
| EcoT38I | GRGCYC | 3 cut(s) | 51, 81, 770 |
| ErhI | CCWWGG | 2 cut(s) | 831, 1264 |
| Esp3I | CGTCTC | 2 cut(s) | 582, 1344 |
| FaeI | CATG | 7 cut(s) | 498, 988, 998, 1096, 1117, 1268, 1387 |
| FaqI | GGGAC | 1 cut(s) | 85 |
| FatI | CATG | 7 cut(s) | 494, 984, 994, 1092, 1113, 1264, 1383 |
| FauI | CCCGC | 3 cut(s) | 62, 238, 531 |
| FbaI | TGATCA | 1 cut(s) | 16 |
| FokI | GGATG | 4 cut(s) | 26, 188, 1323, 1427 |
| FriOI | GRGCYC | 3 cut(s) | 51, 81, 770 |
| FspBI | CTAG | 5 cut(s) | 102, 125, 807, 1209, 1432 |
| GlaI | GCGC | 3 cut(s) | 657, 740, 1255 |
| GsaI | CCCAGC | 1 cut(s) | 677 |
| GsuI | CTGGAG | 1 cut(s) | 731 |
| HaeII | RGCGCY | 1 cut(s) | 742 |
| HaeIII | GGCC | 4 cut(s) | 512, 518, 928, 1275 |
| HapII | CCGG | 4 cut(s) | 44, 111, 237, 1059 |
| HhaI | GCGC | 3 cut(s) | 658, 741, 1256 |
| Hin1II | CATG | 7 cut(s) | 498, 988, 998, 1096, 1117, 1268, 1387 |
| Hin6I | GCGC | 3 cut(s) | 656, 739, 1254 |
| HinP1I | GCGC | 3 cut(s) | 656, 739, 1254 |
| HincII | GTYRAC | 2 cut(s) | 552, 1219 |
| HindII | GTYRAC | 2 cut(s) | 552, 1219 |
| HinfI | GANTC | 4 cut(s) | 8, 410, 455, 1205 |
| HpaII | CCGG | 4 cut(s) | 44, 111, 237, 1059 |
| HphI | GGTGA | 3 cut(s) | 263, 610, 763 |
| Hpy166II | GTNNAC | 4 cut(s) | 552, 667, 1219, 1402 |
| Hpy188I | TCNGA | 5 cut(s) | 7, 13, 354, 415, 733 |
| Hpy188III | TCNNGA | 7 cut(s) | 139, 141, 625, 807, 878, 935, 985 |
| Hpy8I | GTNNAC | 4 cut(s) | 552, 667, 1219, 1402 |
| Hpy99I | CGWCG | 1 cut(s) | 68 |
| HpyAV | CCTTC | 6 cut(s) | 259, 520, 568, 628, 1004, 1348 |
| HpyCH4III | ACNGT | 5 cut(s) | 121, 762, 1195, 1322, 1406 |
| HpyCH4IV | ACGT | 8 cut(s) | 383, 423, 440, 488, 669, 723, 1049, 1303 |
| HpyCH4V | TGCA | 6 cut(s) | 90, 349, 484, 1119, 1348, 1366 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 111, 481, 515, 529, 836, 860, 1389 |
| HpyF3I | CTNAG | 5 cut(s) | 75, 80, 695, 867, 1177 |
| HpySE526I | ACGT | 8 cut(s) | 383, 423, 440, 488, 669, 723, 1049, 1303 |
| Hsp92II | CATG | 7 cut(s) | 498, 988, 998, 1096, 1117, 1268, 1387 |
| HspAI | GCGC | 3 cut(s) | 656, 739, 1254 |
| KpnI | GGTACC | 1 cut(s) | 243 |
| Ksp22I | TGATCA | 1 cut(s) | 16 |
| Kzo9I | GATC | 7 cut(s) | 16, 292, 354, 621, 880, 937, 1027 |
| LguI | GCTCTTC | 1 cut(s) | 1382 |
| LmnI | GCTCC | 6 cut(s) | 46, 313, 480, 529, 746, 827 |
| Lsp1109I | GCAGC | 7 cut(s) | 519, 522, 774, 826, 841, 848, 883 |
| LweI | GCATC | 3 cut(s) | 358, 1031, 1301 |
| MaeI | CTAG | 5 cut(s) | 102, 125, 807, 1209, 1432 |
| MaeII | ACGT | 8 cut(s) | 383, 423, 440, 488, 669, 723, 1049, 1303 |
| MaeIII | GTNAC | 1 cut(s) | 907 |
| MalI | GATC | 7 cut(s) | 18, 294, 356, 623, 882, 939, 1029 |
| MbiI | CCGCTC | 2 cut(s) | 210, 506 |
| MboI | GATC | 7 cut(s) | 16, 292, 354, 621, 880, 937, 1027 |
| MboII | GAAGA | 3 cut(s) | 626, 785, 1399 |
| MflI | RGATCY | 2 cut(s) | 354, 1027 |
| MhlI | GDGCHC | 6 cut(s) | 51, 81, 366, 440, 477, 770 |
| MluCI | AATT | 7 cut(s) | 190, 578, 688, 755, 818, 930, 1197 |
| MlyI | GAGTC | 3 cut(s) | 17, 464, 1214 |
| MmeI | TCCRAC | 2 cut(s) | 387, 438 |
| MseI | TTAA | 1 cut(s) | 581 |
| MslI | CAYNNNNRTG | 3 cut(s) | 422, 1091, 1397 |
| MspA1I | CMGCKG | 2 cut(s) | 84, 839 |
| MspI | CCGG | 4 cut(s) | 44, 111, 237, 1059 |
| MspR9I | CCNGG | 3 cut(s) | 710, 746, 1137 |
| Mva1269I | GAATGC | 2 cut(s) | 1348, 1392 |
| MvaI | CCWGG | 3 cut(s) | 710, 746, 1137 |
| MvnI | CGCG | 3 cut(s) | 446, 460, 658 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 111, 481, 515, 529, 836, 860, 1389 |
| NcoI | CCATGG | 1 cut(s) | 1264 |
| NdeII | GATC | 7 cut(s) | 16, 292, 354, 621, 880, 937, 1027 |
| NlaIII | CATG | 7 cut(s) | 498, 988, 998, 1096, 1117, 1268, 1387 |
| NlaIV | GGNNCC | 7 cut(s) | 48, 109, 241, 309, 829, 1063, 1276 |
| NspI | RCATGY | 1 cut(s) | 498 |
| NspV | TTCGAA | 1 cut(s) | 1352 |
| OliI | CACNNNNGTG | 1 cut(s) | 422 |
| PaeI | GCATGC | 1 cut(s) | 498 |
| PaeR7I | CTCGAG | 1 cut(s) | 139 |
| PagI | TCATGA | 1 cut(s) | 984 |
| PciSI | GCTCTTC | 1 cut(s) | 1382 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 450 |
| PctI | GAATGC | 2 cut(s) | 1348, 1392 |
| PfeI | GAWTC | 1 cut(s) | 410 |
| Pfl23II | CGTACG | 1 cut(s) | 441 |
| PinAI | ACCGGT | 1 cut(s) | 236 |
| PleI | GAGTC | 3 cut(s) | 16, 463, 1213 |
| PmaCI | CACGTG | 1 cut(s) | 384 |
| PmlI | CACGTG | 1 cut(s) | 384 |
| PpsI | GAGTC | 3 cut(s) | 16, 463, 1213 |
| Ppu21I | YACGTR | 3 cut(s) | 384, 441, 1304 |
| Psp124BI | GAGCTC | 1 cut(s) | 81 |
| Psp6I | CCWGG | 3 cut(s) | 708, 744, 1135 |
| PspCI | CACGTG | 1 cut(s) | 384 |
| PspFI | CCCAGC | 1 cut(s) | 673 |
| PspGI | CCWGG | 3 cut(s) | 708, 744, 1135 |
| PspLI | CGTACG | 1 cut(s) | 441 |
| PspN4I | GGNNCC | 7 cut(s) | 48, 109, 241, 309, 829, 1063, 1276 |
| PspPI | GGNCC | 2 cut(s) | 1274, 1378 |
| PstNI | CAGNNNCTG | 1 cut(s) | 842 |
| PsuI | RGATCY | 2 cut(s) | 354, 1027 |
| PvuII | CAGCTG | 2 cut(s) | 84, 839 |
| RsaI | GTAC | 4 cut(s) | 241, 443, 468, 680 |
| RsaNI | GTAC | 4 cut(s) | 240, 442, 467, 679 |
| RseI | CAYNNNNRTG | 3 cut(s) | 422, 1091, 1397 |
| SacI | GAGCTC | 1 cut(s) | 81 |
| SapI | GCTCTTC | 1 cut(s) | 1382 |
| SaqAI | TTAA | 1 cut(s) | 581 |
| Sau3AI | GATC | 7 cut(s) | 16, 292, 354, 621, 880, 937, 1027 |
| Sau96I | GGNCC | 2 cut(s) | 1274, 1378 |
| SchI | GAGTC | 3 cut(s) | 17, 464, 1214 |
| ScrFI | CCNGG | 3 cut(s) | 710, 746, 1137 |
| SduI | GDGCHC | 6 cut(s) | 51, 81, 366, 440, 477, 770 |
| SfaNI | GCATC | 3 cut(s) | 358, 1031, 1301 |
| Sfr274I | CTCGAG | 1 cut(s) | 139 |
| SfuI | TTCGAA | 1 cut(s) | 1352 |
| SinI | GGWCC | 1 cut(s) | 1378 |
| SlaI | CTCGAG | 1 cut(s) | 139 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 422, 1091, 1397 |
| SmlI | CTYRAG | 2 cut(s) | 139, 359 |
| SmoI | CTYRAG | 2 cut(s) | 139, 359 |
| SphI | GCATGC | 1 cut(s) | 498 |
| Sse9I | AATT | 7 cut(s) | 190, 578, 688, 755, 818, 930, 1197 |
| SspMI | CTAG | 5 cut(s) | 102, 125, 807, 1209, 1432 |
| SstI | GAGCTC | 1 cut(s) | 81 |
| StyD4I | CCNGG | 3 cut(s) | 708, 744, 1135 |
| StyI | CCWWGG | 2 cut(s) | 831, 1264 |
| TaaI | ACNGT | 5 cut(s) | 121, 762, 1195, 1322, 1406 |
| TaiI | ACGT | 8 cut(s) | 386, 426, 443, 491, 672, 726, 1052, 1306 |
| TaqI | TCGA | 9 cut(s) | 140, 212, 225, 291, 396, 704, 918, 1293, 1352 |
| TaqII | GACCGA | 1 cut(s) | 516 |
| TasI | AATT | 7 cut(s) | 190, 578, 688, 755, 818, 930, 1197 |
| TauI | GCSGC | 3 cut(s) | 108, 509, 512 |
| TfiI | GAWTC | 1 cut(s) | 410 |
| Tru1I | TTAA | 1 cut(s) | 581 |
| Tru9I | TTAA | 1 cut(s) | 581 |
| TscAI | CASTG | 1 cut(s) | 1185 |
| TseI | GCWGC | 7 cut(s) | 532, 535, 787, 836, 839, 854, 871 |
| TspDTI | ATGAA | 3 cut(s) | 386, 1001, 1400 |
| TspGWI | ACGGA | 4 cut(s) | 434, 1020, 1103, 1326 |
| TspRI | CASTG | 1 cut(s) | 1185 |
| VpaK11BI | GGWCC | 1 cut(s) | 1378 |
| XapI | RAATTY | 2 cut(s) | 190, 688 |
| XbaI | TCTAGA | 1 cut(s) | 806 |
| XceI | RCATGY | 1 cut(s) | 498 |
| XhoI | CTCGAG | 1 cut(s) | 139 |
| XspI | CTAG | 5 cut(s) | 102, 125, 807, 1209, 1432 |