Rorug03G0140000

Indole-3-acetic acid-induced protein ARG7-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0014060
Physical Location & Seq
Forward (+)
11505122 .. 11509018
3897 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0140000.1

Sequence Viewer

Length: 1968 bp
ATGGAAGCCCTAGAAGCTTCTGCGACTCCAGCAAAGTCCCTGAACCCCAATTTGACCTCCAAGGTCAGGGTCATCGTTAGGGTTCGGCCCTTTCTTCCCCACGAAATCTCCGCCCTGAACGGCGATCACACTCCCTGCGCTTCCGTTCTTGAACAAGAATCTCAGTCGTCCACTGAAGAAGTCGTCGTTCATCTCAAAGATAAAGAATCAAGCCGAAAGGAGTGTTATCGGTTAGACTCGTTCTTTTCCGGGGAGGACAACAATGTAGCTCGGATTTTCTACAGGGAAGTGAGCCCTTTGATTCCGAGAATCTTCCAAGGCTTCAATTCCACTGTGTTTGCTTATGGAGCTACCGGTAGTGGAAAGACTTACGCTATGCAGGGGACGGATGAGATGCCGGGTCTAATGCCACTGGCCATGTCCACGATCCTGTCTATGTGCCAGTGCACCGGAGGCACAGCTGAGGTTTCATACTATGAGGTCTATATGGACAGGTGTTATGATCTGTTAGAGGTCAAATCTCAGGAAATTGCTGTTTTGGATGACAAAGATGGTCGGATTCATCTTAGGGGGCTCTCTAGGGTGCCTATAAAGTCGATGCAAGAATTTGATGAGGCCTTGTCTTGTGGGATTCAGAGAAGGAAAACCGCGCATACGGGTCTTAATGATGTCTCTAGTAGGAGCCATGGGGTCCTTGTGATTTCTGTTTCCACTCCTTGTGATGGTGTTTCTGGGGCTGCTGTTACTGGGAAGTTGAACCTCATAGACTTGGCAGGCATTTTTACATGGAAGTCAAACCTCATAGACTTGGCAGGCAACGAAGATAACAGAAGAACTTGCAATGAAGGGATTCGTCTCCAAGAGAGTGCAAAGATCAACCAGTCATTGTTTTCATTGTCAAATGTGATTTATGCATTAAACAACAACTTATCCCGAGTTCCCTACAGAGAGAGTAAATTGACTCGTATATTGCAAGACTCACTAGGTGGGATGAGCGAGGCTTTGATGGTTGCTTGCTTGAATCCAGGAGAGTACCAGGAGTCAGTTCACACTGTCAGCTTGGCAGCTCGGTCACGTCACATCACCAATTCGGTTCCTTCGACTCACAAGCAAGAGACACCAAAGGTTAAAGTAGACATGGAAGCCAAACTTCATGCTTGGCTTGAATCCAGAGGAAAGACAAAGAGTGCACAAAGAGTTCAACCATTGAATTCTCCTTTCTTGGGAAAACCTCCGCTCTCCTCTACCAAGAAATTTAACACCAACCTCAGCTCACTGAAGAAGCTTACTACTAACCGACGTGATGGAAAGGAAAGGACAATCACTACGGCTGTCAGGAATTTATTTGATGAAGGCCCAGTTGATACTAATTTGGAGAGCCTGCTAAATGCTGCTAAGGATAAGGGTGATGCTGAAACTGGTGGATTTGCAAGCTTACCTGGTGAGTCATCAAACCATGACGAGAAGTCTACAATCTTTGTTAATTCATCACCTGTTGGTAAGAGGAAGAGCCCACACAAAAGTCCTTTGAGGAAAGTTCTTTTCGCTGTCAATACAAATATAAACCCAAAACCCTTTGATGAACTGGTATCCATTGAGCCAAGGACACCCAAGACACCTTTTCCTGTAAATTGTATGAACAACAGATTCCAAAATCTGGGAACCCCACTAGAGAAATTCACTGCTTGTGGATCTCAAGTAAAGAACTGCCTTGTTCAAGAGTATGTTGACTTCTTAAACACAGCCAACAGGGAGGAGCTACTGGAAATCAAGGGAATCGGAGTCAAATATGCAGACTACATACTCGGACTGAGAGAAACAAGCCCTTTACAATCGCTGAGCGATTTGGAGAAAGTAGGGCTCTCTTCTAAGCAGATTCACATCTTGTTTAACAAAGCTGCAATAGGAGTATTCGATGAAAAAGGAGATGCAAAACCCAAGTGTGCGGTGTTTTCGCAAGTCCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
Auxin_inducible

Protein Analysis

655

Amino Acids

72.09

Weight (kDa)

8.51

Isoelectric Point (pI)

46.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Microtub_bd PF16796 18 - 170 3.9e-14 Microtubule binding
Kinesin PF00225 27 - 259 1.8e-52 Kinesin motor domain
Kinesin PF00225 264 - 361 1.5e-30 Kinesin motor domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014060)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G52610
fragaria_vesca FvH4_6g19190
malus_domestica MD12G1027700.v1.1
prunus_persica Prupe.7G103700_v2.0.a1 Prupe.7G103700_v2.0.a1 Prupe.7G103900_v2.0.a1
pyrus_communis pycom12g02650
rosa_chinensis RchiOBHm_Chr3g0474311
rosa_laevigata RLG00000023933
rosa_multiflora Rmu_sc0004507.1_g000012
rosa_roxburghii Rroxscaffold_6G00407370
rosa_rugosa Rorug03G0140000
rosa_samantha Rh3AG190700 Rh3BG219900 Rh3CG215100 Rh3DG215600
rosa_wichuraiana Rw3G017400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 583
AccB7I CCANNNNNTGG 1 cut(s) 1657
AccBSI CCGCTC 1 cut(s) 1237
AccI GTMKAC 2 cut(s) 1134, 1469
AccII CGCG 1 cut(s) 650
AciI CCGC 4 cut(s) 111, 648, 1235, 1946
AclWI GGATC 2 cut(s) 421, 1699
AcoI YGGCCR 1 cut(s) 414
AcsI RAATTY 5 cut(s) 605, 1210, 1253, 1339, 1676
AcuI CTGAAG 2 cut(s) 195, 1298
AdeI CACNNNGTG 1 cut(s) 986
AfaI GTAC 1 cut(s) 1034
AfiI CCNNNNNNNGG 4 cut(s) 66, 722, 1223, 1657
AgeI ACCGGT 1 cut(s) 353
AgsI TTSAA 8 cut(s) 152, 325, 757, 1021, 1166, 1202, 1210, 1718
AhdI GACNNNNNGTC 1 cut(s) 1465
AjiI CACGTC 2 cut(s) 1076, 1301
AjnI CCWGG 3 cut(s) 1024, 1035, 1438
Alw21I GWGCWC 2 cut(s) 449, 1192
Alw26I GTCTC 3 cut(s) 676, 860, 1109
Alw44I GTGCAC 2 cut(s) 445, 1188
AlwI GGATC 2 cut(s) 421, 1699
Ama87I CYCGRG 1 cut(s) 933
AoxI GGCC 4 cut(s) 86, 414, 615, 1354
ApaLI GTGCAC 2 cut(s) 445, 1188
ApeKI GCWGC 4 cut(s) 737, 1064, 1391, 1898
ApoI RAATTY 5 cut(s) 605, 1210, 1253, 1339, 1676
AsiGI ACCGGT 1 cut(s) 353
Asp700I GAANNNNTTC 1 cut(s) 849
AspLEI GCGC 2 cut(s) 140, 652
AspS9I GGNCC 3 cut(s) 87, 691, 1355
AsuC2I CCSGG 2 cut(s) 250, 399
AsuHPI GGTGA 4 cut(s) 1075, 1418, 1454, 1482
AvaI CYCGRG 1 cut(s) 933
AvaII GGWCC 1 cut(s) 691
BaeGI GKGCMC 2 cut(s) 449, 1192
BalI TGGCCA 1 cut(s) 416
BanI GGYRCC 1 cut(s) 583
BanII GRGCYC 4 cut(s) 296, 576, 1514, 1863
BarI GAAGNNNNNNTAC 2 cut(s) 1715, 1747
Bbv12I GWGCWC 2 cut(s) 449, 1192
BbvCI CCTCAGC 2 cut(s) 462, 1268
BbvI GCAGC 4 cut(s) 724, 1076, 1378, 1885
BccI CCATC 4 cut(s) 545, 716, 1000, 1298
BceAI ACGGC 2 cut(s) 136, 1344
BciT130I CCWGG 3 cut(s) 1026, 1037, 1440
BciVI GTATCC 1 cut(s) 1600
BcnI CCSGG 2 cut(s) 250, 399
BcoDI GTCTC 3 cut(s) 676, 860, 1109
BfaI CTAG 5 cut(s) 11, 579, 675, 983, 1670
BfmI CTRYAG 2 cut(s) 280, 943
BfuI GTATCC 1 cut(s) 1600
BisI GCNGC 4 cut(s) 738, 1065, 1392, 1899
BlpI GCTNAGC 1 cut(s) 1838
BlsI GCNGC 4 cut(s) 739, 1066, 1393, 1900
Bme1390I CCNGG 5 cut(s) 250, 399, 1026, 1037, 1440
Bme18I GGWCC 1 cut(s) 691
BmeRI GACNNNNNGTC 1 cut(s) 1465
BmeT110I CYCGRG 1 cut(s) 933
BmgBI CACGTC 2 cut(s) 1076, 1301
BmgT120I GGNCC 3 cut(s) 87, 691, 1355
BmiI GGNNCC 5 cut(s) 585, 683, 692, 1095, 1663
BmrFI CCNGG 5 cut(s) 250, 399, 1026, 1037, 1440
BmrI ACTGGG 2 cut(s) 756, 1352
BmsI GCATC 4 cut(s) 384, 588, 1399, 1918
BmuI ACTGGG 2 cut(s) 756, 1352
BpmI CTGGAG 1 cut(s) 12
Bpu10I CCTNAGC 3 cut(s) 462, 1268, 1395
Bpu1102I GCTNAGC 1 cut(s) 1838
BpuEI CTTGAG 1 cut(s) 1680
BpuMI CCSGG 2 cut(s) 250, 399
BsaBI GATNNNNATC 1 cut(s) 1880
BsaJI CCNNGG 5 cut(s) 60, 249, 316, 685, 1601
BsaWI WCCGGW 2 cut(s) 353, 449
BsaXI ACNNNNNCTCC 2 cut(s) 92, 122
Bsc4I CCNNNNNNNGG 4 cut(s) 66, 722, 1223, 1657
Bse118I RCCGGY 1 cut(s) 353
Bse1I ACTGG 9 cut(s) 417, 442, 751, 880, 1358, 1423, 1590, 1767, 1963
Bse3DI GCAATG 1 cut(s) 847
Bse8I GATNNNNATC 1 cut(s) 1880
BseBI CCWGG 3 cut(s) 1026, 1037, 1440
BseDI CCNNGG 5 cut(s) 60, 249, 316, 685, 1601
BseGI GGATG 3 cut(s) 394, 547, 996
BseJI GATNNNNATC 1 cut(s) 1880
BseLI CCNNNNNNNGG 4 cut(s) 66, 722, 1223, 1657
BseMI GCAATG 1 cut(s) 847
BseMII CTCAG 6 cut(s) 176, 453, 536, 1282, 1802, 1829
BseNI ACTGG 9 cut(s) 417, 442, 751, 880, 1358, 1423, 1590, 1767, 1963
BseRI GAGGAG 2 cut(s) 1231, 1769
BseSI GKGCMC 2 cut(s) 449, 1192
BseXI GCAGC 4 cut(s) 724, 1076, 1378, 1885
Bsh1236I CGCG 1 cut(s) 650
BshFI GGCC 4 cut(s) 88, 416, 617, 1356
BshNI GGYRCC 1 cut(s) 583
BshTI ACCGGT 1 cut(s) 353
BsiHKAI GWGCWC 2 cut(s) 449, 1192
BsiHKCI CYCGRG 1 cut(s) 933
BsiSI CCGG 4 cut(s) 249, 354, 398, 450
BslFI GGGAC 2 cut(s) 22, 397
BslI CCNNNNNNNGG 4 cut(s) 66, 722, 1223, 1657
BsmAI GTCTC 3 cut(s) 676, 860, 1109
BsmBI CGTCTC 1 cut(s) 860
BsmFI GGGAC 2 cut(s) 22, 397
BsnI GGCC 4 cut(s) 88, 416, 617, 1356
BsoBI CYCGRG 1 cut(s) 933
Bsp1286I GDGCHC 6 cut(s) 296, 449, 576, 1192, 1514, 1863
Bsp143I GATC 5 cut(s) 124, 426, 502, 873, 1691
Bsp1720I GCTNAGC 1 cut(s) 1838
Bsp19I CCATGG 1 cut(s) 685
BspACI CCGC 4 cut(s) 111, 648, 1235, 1946
BspANI GGCC 4 cut(s) 88, 416, 617, 1356
BspCNI CTCAG 6 cut(s) 175, 454, 535, 1281, 1803, 1830
BspFNI CGCG 1 cut(s) 650
BspLI GGNNCC 5 cut(s) 585, 683, 692, 1095, 1663
BspPI GGATC 2 cut(s) 421, 1699
BspQI GCTCTTC 1 cut(s) 1502
BspT107I GGYRCC 1 cut(s) 583
BsrBI CCGCTC 1 cut(s) 1237
BsrDI GCAATG 1 cut(s) 847
BsrFI RCCGGY 1 cut(s) 353
BsrI ACTGG 9 cut(s) 417, 442, 751, 880, 1358, 1423, 1590, 1767, 1963
BssAI RCCGGY 1 cut(s) 353
BssECI CCNNGG 5 cut(s) 60, 249, 316, 685, 1601
BssMI GATC 5 cut(s) 124, 426, 502, 873, 1691
BssT1I CCWWGG 4 cut(s) 60, 316, 685, 1601
Bst2UI CCWGG 3 cut(s) 1026, 1037, 1440
Bst4CI ACNGT 2 cut(s) 334, 1054
Bst6I CTCTTC 2 cut(s) 1502, 1870
BstC8I GCNNGC 5 cut(s) 775, 814, 1015, 1382, 1432
BstDEI CTNAG 9 cut(s) 162, 462, 522, 566, 1268, 1395, 1811, 1838, 1869
BstDSI CCRYGG 1 cut(s) 685
BstF5I GGATG 3 cut(s) 394, 547, 996
BstFNI CGCG 1 cut(s) 650
BstHHI GCGC 2 cut(s) 140, 652
BstKTI GATC 5 cut(s) 127, 429, 505, 876, 1694
BstMAI GTCTC 3 cut(s) 676, 860, 1109
BstMBI GATC 5 cut(s) 124, 426, 502, 873, 1691
BstMWI GCNNNNNNNGC 4 cut(s) 14, 29, 347, 453
BstNI CCWGG 3 cut(s) 1026, 1037, 1440
BstSCI CCNGG 5 cut(s) 248, 397, 1024, 1035, 1438
BstSFI CTRYAG 2 cut(s) 280, 943
BstSLI GKGCMC 2 cut(s) 449, 1192
BstUI CGCG 1 cut(s) 650
BstV1I GCAGC 4 cut(s) 724, 1076, 1378, 1885
BstX2I RGATCY 1 cut(s) 1691
BstYI RGATCY 1 cut(s) 1691
BsuI GTATCC 1 cut(s) 1600
BsuRI GGCC 4 cut(s) 88, 416, 617, 1356
BtgI CCRYGG 1 cut(s) 685
BtrI CACGTC 2 cut(s) 1076, 1301
BtsCI GGATG 3 cut(s) 394, 547, 996
BtsI GCAGTG 1 cut(s) 1680
BtsIMutI CAGTG 7 cut(s) 171, 330, 410, 449, 1050, 1274, 1680
Cac8I GCNNGC 5 cut(s) 775, 814, 1015, 1382, 1432
CfoI GCGC 2 cut(s) 140, 652
Cfr10I RCCGGY 1 cut(s) 353
Cfr13I GGNCC 3 cut(s) 87, 691, 1355
CsiI ACCWGGT 1 cut(s) 1438
Csp6I GTAC 1 cut(s) 1033
CspAI ACCGGT 1 cut(s) 353
CspCI CAANNNNNGTGG 2 cut(s) 319, 354
CviAII CATG 6 cut(s) 418, 686, 786, 1138, 1154, 1457
CviQI GTAC 1 cut(s) 1033
DdeI CTNAG 9 cut(s) 162, 462, 522, 566, 1268, 1395, 1811, 1838, 1869
DpnI GATC 5 cut(s) 126, 428, 504, 875, 1693
DpnII GATC 5 cut(s) 124, 426, 502, 873, 1691
DraIII CACNNNGTG 1 cut(s) 986
DriI GACNNNNNGTC 1 cut(s) 1465
EaeI YGGCCR 1 cut(s) 414
Eam1104I CTCTTC 2 cut(s) 1502, 1870
Eam1105I GACNNNNNGTC 1 cut(s) 1465
EarI CTCTTC 2 cut(s) 1502, 1870
EciI GGCGGA 1 cut(s) 100
Eco130I CCWWGG 4 cut(s) 60, 316, 685, 1601
Eco147I AGGCCT 1 cut(s) 617
Eco24I GRGCYC 4 cut(s) 296, 576, 1514, 1863
Eco47I GGWCC 1 cut(s) 691
Eco57I CTGAAG 2 cut(s) 195, 1298
Eco88I CYCGRG 1 cut(s) 933
EcoO109I RGGNCCY 1 cut(s) 691
EcoRI GAATTC 1 cut(s) 1210
EcoRII CCWGG 3 cut(s) 1024, 1035, 1438
EcoT14I CCWWGG 4 cut(s) 60, 316, 685, 1601
EcoT22I ATGCAT 1 cut(s) 916
EcoT38I GRGCYC 4 cut(s) 296, 576, 1514, 1863
ErhI CCWWGG 4 cut(s) 60, 316, 685, 1601
Esp3I CGTCTC 1 cut(s) 860
FaeI CATG 6 cut(s) 421, 689, 789, 1141, 1157, 1460
FalI AAGNNNNNCTT 2 cut(s) 1134, 1166
FaqI GGGAC 2 cut(s) 22, 397
FatI CATG 6 cut(s) 417, 685, 785, 1137, 1153, 1456
FblI GTMKAC 2 cut(s) 1134, 1469
Fnu4HI GCNGC 4 cut(s) 738, 1065, 1392, 1899
FokI GGATG 3 cut(s) 401, 554, 1003
FriOI GRGCYC 4 cut(s) 296, 576, 1514, 1863
Fsp4HI GCNGC 4 cut(s) 738, 1065, 1392, 1899
FspBI CTAG 5 cut(s) 11, 579, 675, 983, 1670
GlaI GCGC 2 cut(s) 139, 651
GluI GCNGC 4 cut(s) 738, 1065, 1392, 1899
GsuI CTGGAG 1 cut(s) 12
HaeIII GGCC 4 cut(s) 88, 416, 617, 1356
HapII CCGG 4 cut(s) 249, 354, 398, 450
HhaI GCGC 2 cut(s) 140, 652
Hin1II CATG 6 cut(s) 421, 689, 789, 1141, 1157, 1460
Hin6I GCGC 2 cut(s) 138, 650
HinP1I GCGC 2 cut(s) 138, 650
HincII GTYRAC 1 cut(s) 1729
HindII GTYRAC 1 cut(s) 1729
HindIII AAGCTT 3 cut(s) 15, 1283, 1432
HpaII CCGG 4 cut(s) 249, 354, 398, 450
HphI GGTGA 4 cut(s) 1075, 1418, 1454, 1482
Hpy166II GTNNAC 8 cut(s) 171, 423, 447, 1048, 1135, 1190, 1470, 1729
Hpy188I TCNGA 6 cut(s) 273, 306, 558, 636, 1781, 1808
Hpy188III TCNNGA 6 cut(s) 149, 524, 933, 1170, 1336, 1718
Hpy8I GTNNAC 8 cut(s) 171, 423, 447, 1048, 1135, 1190, 1470, 1729
Hpy99I CGWCG 2 cut(s) 188, 1302
HpyAV CCTTC 4 cut(s) 633, 839, 1107, 1346
HpyCH4III ACNGT 2 cut(s) 334, 1054
HpyCH4IV ACGT 2 cut(s) 1075, 1300
HpyF10VI GCNNNNNNNGC 4 cut(s) 14, 29, 347, 453
HpyF3I CTNAG 9 cut(s) 162, 462, 522, 566, 1268, 1395, 1811, 1838, 1869
HpySE526I ACGT 2 cut(s) 1075, 1300
Hsp92II CATG 6 cut(s) 421, 689, 789, 1141, 1157, 1460
HspAI GCGC 2 cut(s) 138, 650
Kzo9I GATC 5 cut(s) 124, 426, 502, 873, 1691
LguI GCTCTTC 1 cut(s) 1502
LmnI GCTCC 3 cut(s) 347, 681, 1756
Lsp1109I GCAGC 4 cut(s) 724, 1076, 1378, 1885
LweI GCATC 4 cut(s) 384, 588, 1399, 1918
MabI ACCWGGT 1 cut(s) 1438
MaeI CTAG 5 cut(s) 11, 579, 675, 983, 1670
MaeII ACGT 2 cut(s) 1075, 1300
MaeIII GTNAC 3 cut(s) 742, 1071, 1076
MalI GATC 5 cut(s) 126, 428, 504, 875, 1693
MbiI CCGCTC 1 cut(s) 1237
MboI GATC 5 cut(s) 124, 426, 502, 873, 1691
MboII GAAGA 8 cut(s) 86, 188, 304, 833, 843, 1291, 1519, 1857
MflI RGATCY 1 cut(s) 1691
MhlI GDGCHC 6 cut(s) 296, 449, 576, 1192, 1514, 1863
MlsI TGGCCA 1 cut(s) 416
MluNI TGGCCA 1 cut(s) 416
MlyI GAGTC 8 cut(s) 19, 230, 955, 971, 1049, 1096, 1454, 1791
MmeI TCCRAC 1 cut(s) 536
Mox20I TGGCCA 1 cut(s) 416
Mph1103I ATGCAT 1 cut(s) 916
MroXI GAANNNNTTC 1 cut(s) 849
MscI TGGCCA 1 cut(s) 416
MseI TTAA 7 cut(s) 663, 917, 1128, 1257, 1482, 1736, 1890
Msp20I TGGCCA 1 cut(s) 416
MspA1I CMGCKG 1 cut(s) 461
MspI CCGG 4 cut(s) 249, 354, 398, 450
MspR9I CCNGG 5 cut(s) 250, 399, 1026, 1037, 1440
MvaI CCWGG 3 cut(s) 1026, 1037, 1440
MvnI CGCG 1 cut(s) 650
MwoI GCNNNNNNNGC 4 cut(s) 14, 29, 347, 453
NciI CCSGG 2 cut(s) 250, 399
NcoI CCATGG 1 cut(s) 685
NdeII GATC 5 cut(s) 124, 426, 502, 873, 1691
NlaIII CATG 6 cut(s) 421, 689, 789, 1141, 1157, 1460
NlaIV GGNNCC 5 cut(s) 585, 683, 692, 1095, 1663
NmuCI GTSAC 2 cut(s) 1071, 1076
NsiI ATGCAT 1 cut(s) 916
PceI AGGCCT 1 cut(s) 617
PciSI GCTCTTC 1 cut(s) 1502
PcsI WCGNNNNNNNCGW 1 cut(s) 1097
PdmI GAANNNNTTC 1 cut(s) 849
PflMI CCANNNNNTGG 1 cut(s) 1657
PfoI TCCNGGA 1 cut(s) 1024
PinAI ACCGGT 1 cut(s) 353
PkrI GCNGC 4 cut(s) 739, 1066, 1393, 1900
PleI GAGTC 8 cut(s) 19, 230, 955, 971, 1048, 1096, 1453, 1790
PpsI GAGTC 8 cut(s) 19, 230, 955, 971, 1048, 1096, 1453, 1790
PpuMI RGGWCCY 1 cut(s) 691
Psp5II RGGWCCY 1 cut(s) 691
Psp6I CCWGG 3 cut(s) 1024, 1035, 1438
PspGI CCWGG 3 cut(s) 1024, 1035, 1438
PspN4I GGNNCC 5 cut(s) 585, 683, 692, 1095, 1663
PspPI GGNCC 3 cut(s) 87, 691, 1355
PspPPI RGGWCCY 1 cut(s) 691
PsuI RGATCY 1 cut(s) 1691
PvuII CAGCTG 1 cut(s) 461
RsaI GTAC 1 cut(s) 1034
RsaNI GTAC 1 cut(s) 1033
SapI GCTCTTC 1 cut(s) 1502
SaqAI TTAA 7 cut(s) 663, 917, 1128, 1257, 1482, 1736, 1890
SatI GCNGC 4 cut(s) 738, 1065, 1392, 1899
Sau3AI GATC 5 cut(s) 124, 426, 502, 873, 1691
Sau96I GGNCC 3 cut(s) 87, 691, 1355
SchI GAGTC 8 cut(s) 19, 230, 955, 971, 1049, 1096, 1454, 1791
ScrFI CCNGG 5 cut(s) 250, 399, 1026, 1037, 1440
SduI GDGCHC 6 cut(s) 296, 449, 576, 1192, 1514, 1863
SexAI ACCWGGT 1 cut(s) 1438
SfaNI GCATC 4 cut(s) 384, 588, 1399, 1918
SfcI CTRYAG 2 cut(s) 280, 943
SinI GGWCC 1 cut(s) 691
SmlI CTYRAG 1 cut(s) 1695
SmoI CTYRAG 1 cut(s) 1695
SseBI AGGCCT 1 cut(s) 617
SsiI CCGC 4 cut(s) 111, 648, 1235, 1946
SspMI CTAG 5 cut(s) 11, 579, 675, 983, 1670
StuI AGGCCT 1 cut(s) 617
StyD4I CCNGG 5 cut(s) 248, 397, 1024, 1035, 1438
StyI CCWWGG 4 cut(s) 60, 316, 685, 1601
TaaI ACNGT 2 cut(s) 334, 1054
TaiI ACGT 2 cut(s) 1078, 1303
TaqI TCGA 3 cut(s) 596, 1100, 1914
TaqII GACCGA 1 cut(s) 1059
Tru1I TTAA 7 cut(s) 663, 917, 1128, 1257, 1482, 1736, 1890
Tru9I TTAA 7 cut(s) 663, 917, 1128, 1257, 1482, 1736, 1890
TscAI CASTG 7 cut(s) 178, 337, 417, 449, 1057, 1281, 1687
TseFI GTSAC 2 cut(s) 1071, 1076
TseI GCWGC 4 cut(s) 737, 1064, 1391, 1898
Tsp45I GTSAC 2 cut(s) 1071, 1076
TspGWI ACGGA 2 cut(s) 133, 401
TspRI CASTG 7 cut(s) 178, 337, 417, 449, 1057, 1281, 1687
Van91I CCANNNNNTGG 1 cut(s) 1657
VneI GTGCAC 2 cut(s) 445, 1188
VpaK11BI GGWCC 1 cut(s) 691
XapI RAATTY 5 cut(s) 605, 1210, 1253, 1339, 1676
XmiI GTMKAC 2 cut(s) 1134, 1469
XmnI GAANNNNTTC 1 cut(s) 849
XspI CTAG 5 cut(s) 11, 579, 675, 983, 1670
Zsp2I ATGCAT 1 cut(s) 916
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.