Rh3BG219900

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0014060
Physical Location & Seq
Reverse (-)
19799208 .. 19803947
4740 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG219900.1

Sequence Viewer

Length: 1422 bp
ATGTCAGACCAGAACCCCAACCCGGAATCAATGCCCGAGCCCATTGCCCGACCCGTCGGTGGAACCGAGTACAGCTGGTGCAAAGCCGTTCCCGTCGGCACCGGCATAACCGTTCTAGCTTTCCTCCTCACTAAACCCCCAAACATCCCACTTCTCCAAAACGCCCTCCACAACCTCCAAAATTCCCACCCTATCCTCCGCTCCAAGCACCACTTCGATCCCGCCACCAACACCCACTCCTTCCTCACTCCCCCGACTCCCCACCTCCAAATCCAGCCGTTCGATCTCCCATCAACGGCCAGCATTCTCCAGACCCACTCCGCCGTCTCCCCATTCCATCAAATCTTCGAACACGAGCTCAACCTCAACACGTGGCGCGACCCCGATCCTCTGTCGGCCGGCACCGACGTGTTGTTCGCCAGCACCTACACGCTCAGCGAGTCCCAGTGGGCCCTGGTGCTCCGGCTGCACACGTCAGCATGCGACCGCGCGGCGGCGGCGGCGCTGCTGAAGGAGCTGTTGAGGTCGGTTGGGGGAGGAGGGACAGAGAGGGAATTAAAAGGAAATGGGGAGGTTATTTCGGCACTTGAGGATCTGATCCCAAATGGGAAGGCGAACAAGCCGTTCTGGGCGCGTGGGGTGGACATGCTTGGGTACTCTTTGAATTCGTTCAGGCTGTCCAATATAGAGTTCGAAGACGTGAGTTTGCCGAGGACTACCCAGATGGTGAAGTTGCGGCTTAACCCAGAACACACTGATCAGCTTCTTGCTGGTTGCAAGTCCAGAGGAATAAAACTATGCGGGGTGCTGGCAGCTGCTGGATTGATTGCCGCGCATGCCTCTAAGCACCTTCCCGATCATCAATGGGAAAAGTATGCTGTAGTAACGCTTCTTGACTGCCGTTCACTTCTTGATCCGCCACTTTCTGCCAATGATTTTGGTTTTTATCATTCTGCCATCATGAATTCACATGACATAAACGGAGAAAACACACTGTGGGAGCTGGCAAAGAGATGCTACACAGCCTTTGCAGATGCCAAGAATTCTAACAAGCATTTCTCAGACATGTCAGACCTGAACTTCCTCATGTGCAAGGCTATTGAAAACCCTGGTTTGACTCCATCATCGTCGATGAGAACTGCCTTTGTCTCGGTGTTTGAGGACCTAGTGATCGATGATTCCAGTGAAGTGCACCAAGAGCTTGGGTTGGAGGACTACGAGGGGTGCGCTTCAGTCCATGGTGTTGGCCCTTCCATAGCTATTTTTGACGCCATACGTGATGGAGGATTGAATTGTGCATGTGTTTATCCGTCGCCCTTGCATTCAAGGGAACAAATGCAAGGCTTGATGGATCATATGAAGAGCGTTCTTGTAGATGGTTGTACTGTTGACAGCGAGAGCGAGATTAGTTCATCTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AATase

Protein Analysis

473

Amino Acids

51.61

Weight (kDa)

5.43

Isoelectric Point (pI)

42.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PapA_C PF16911 239 - 343 9.6e-10 Phthiocerol/phthiodiolone dimycocerosyl transferase C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014060)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G52610
fragaria_vesca FvH4_6g19190
malus_domestica MD12G1027700.v1.1
prunus_persica Prupe.7G103700_v2.0.a1 Prupe.7G103700_v2.0.a1 Prupe.7G103900_v2.0.a1
pyrus_communis pycom12g02650
rosa_chinensis RchiOBHm_Chr3g0474311
rosa_laevigata RLG00000023933
rosa_multiflora Rmu_sc0004507.1_g000012
rosa_roxburghii Rroxscaffold_6G00407370
rosa_rugosa Rorug03G0140000
rosa_samantha Rh3AG190700 Rh3BG219900 Rh3CG215100 Rh3DG215600
rosa_wichuraiana Rw3G017400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 98, 401
AccBSI CCGCTC 1 cut(s) 201
AccII CGCG 5 cut(s) 378, 489, 491, 634, 833
AclWI GGATC 6 cut(s) 212, 380, 592, 600, 908, 1359
AcoI YGGCCR 2 cut(s) 297, 396
AcsI RAATTY 4 cut(s) 181, 664, 964, 1042
AcuI CTGAAG 2 cut(s) 530, 1215
AcvI CACGTG 1 cut(s) 372
AcyI GRCGYC 1 cut(s) 1269
AdeI CACNNNGTG 1 cut(s) 996
AfaI GTAC 3 cut(s) 71, 656, 1384
AfiI CCNNNNNNNGG 4 cut(s) 22, 59, 295, 493
AflIII ACRYGT 4 cut(s) 369, 408, 471, 1065
AgsI TTSAA 4 cut(s) 664, 1103, 1291, 1326
AjiI CACGTC 3 cut(s) 409, 474, 700
AjnI CCWGG 2 cut(s) 453, 1108
AjuI GAANNNNNNNTTGG 4 cut(s) 197, 229, 674, 706
AleI CACNNNNGTG 1 cut(s) 407
AluBI AGCT 9 cut(s) 75, 119, 358, 517, 763, 815, 1003, 1201, 1259
AluI AGCT 9 cut(s) 75, 119, 358, 517, 763, 815, 1003, 1201, 1259
Alw21I GWGCWC 3 cut(s) 360, 462, 1194
Alw26I GTCTC 2 cut(s) 331, 1153
Alw44I GTGCAC 1 cut(s) 1190
AlwI GGATC 6 cut(s) 212, 380, 592, 600, 908, 1359
AlwNI CAGNNNCTG 1 cut(s) 818
Ama87I CYCGRG 1 cut(s) 35
AoxI GGCC 4 cut(s) 297, 396, 450, 1246
ApaI GGGCCC 1 cut(s) 454
ApaLI GTGCAC 1 cut(s) 1190
ApeKI GCWGC 4 cut(s) 466, 505, 812, 815
ApoI RAATTY 4 cut(s) 181, 664, 964, 1042
ArsI GACNNNNNNTTYG 2 cut(s) 398, 430
Asp700I GAANNNNTTC 1 cut(s) 668
AspLEI GCGC 6 cut(s) 378, 491, 505, 634, 835, 1229
AspS9I GGNCC 4 cut(s) 450, 451, 1162, 1247
AsuC2I CCSGG 1 cut(s) 23
AsuHPI GGTGA 1 cut(s) 739
AsuII TTCGAA 2 cut(s) 348, 693
AvaI CYCGRG 1 cut(s) 35
AvaII GGWCC 1 cut(s) 1162
BaeGI GKGCMC 2 cut(s) 454, 1194
BanI GGYRCC 2 cut(s) 98, 401
BanII GRGCYC 3 cut(s) 42, 360, 454
BarI GAAGNNNNNNTAC 2 cut(s) 873, 905
BauI CACGAG 1 cut(s) 353
BbrPI CACGTG 1 cut(s) 372
BbsI GAAGAC 1 cut(s) 702
Bbv12I GWGCWC 3 cut(s) 360, 462, 1194
BbvI GCAGC 4 cut(s) 453, 492, 802, 824
BccI CCATC 8 cut(s) 298, 345, 718, 965, 1129, 1274, 1342, 1370
BceAI ACGGC 6 cut(s) 71, 262, 308, 312, 607, 885
BcgI CGANNNNNNTGC 2 cut(s) 26, 60
BciT130I CCWGG 2 cut(s) 455, 1110
BclI TGATCA 1 cut(s) 757
BcnI CCSGG 1 cut(s) 23
BcoDI GTCTC 2 cut(s) 331, 1153
BfaI CTAG 2 cut(s) 116, 1166
BfmI CTRYAG 1 cut(s) 879
BfoI RGCGCY 1 cut(s) 506
BlpI GCTNAGC 1 cut(s) 434
Bme1390I CCNGG 3 cut(s) 23, 455, 1110
Bme18I GGWCC 1 cut(s) 1162
BmeT110I CYCGRG 1 cut(s) 35
BmgBI CACGTC 3 cut(s) 409, 474, 700
BmgT120I GGNCC 4 cut(s) 450, 451, 1162, 1247
BmiI GGNNCC 4 cut(s) 64, 100, 403, 452
BmrFI CCNGG 3 cut(s) 23, 455, 1110
BmrI ACTGGG 1 cut(s) 439
BmsI GCATC 2 cut(s) 1004, 1024
BmuI ACTGGG 1 cut(s) 439
BpiI GAAGAC 1 cut(s) 702
BpmI CTGGAG 1 cut(s) 293
Bpu1102I GCTNAGC 1 cut(s) 434
Bpu14I TTCGAA 2 cut(s) 348, 693
BpuEI CTTGAG 1 cut(s) 608
BpuMI CCSGG 1 cut(s) 23
Bsa29I ATCGAT 1 cut(s) 1173
BsaAI YACGTR 2 cut(s) 372, 1277
BsaHI GRCGYC 1 cut(s) 1269
BsaJI CCNNGG 4 cut(s) 453, 710, 1108, 1237
BsaXI ACNNNNNCTCC 2 cut(s) 221, 251
Bsc4I CCNNNNNNNGG 4 cut(s) 22, 59, 295, 493
Bse118I RCCGGY 2 cut(s) 101, 398
Bse1I ACTGG 2 cut(s) 445, 1182
Bse3DI GCAATG 1 cut(s) 42
BseBI CCWGG 2 cut(s) 455, 1110
BseCI ATCGAT 1 cut(s) 1173
BseDI CCNNGG 4 cut(s) 453, 710, 1108, 1237
BseGI GGATG 1 cut(s) 144
BseLI CCNNNNNNNGG 4 cut(s) 22, 59, 295, 493
BseMI GCAATG 1 cut(s) 42
BseMII CTCAG 2 cut(s) 448, 1074
BseNI ACTGG 2 cut(s) 445, 1182
BseRI GAGGAG 2 cut(s) 116, 552
BseSI GKGCMC 2 cut(s) 454, 1194
BseX3I CGGCCG 1 cut(s) 396
BseXI GCAGC 4 cut(s) 453, 492, 802, 824
BsgI GTGCAG 1 cut(s) 452
Bsh1236I CGCG 5 cut(s) 378, 489, 491, 634, 833
Bsh1285I CGRYCG 2 cut(s) 399, 487
BshFI GGCC 4 cut(s) 299, 398, 452, 1248
BshNI GGYRCC 2 cut(s) 98, 401
BshVI ATCGAT 1 cut(s) 1173
BsiEI CGRYCG 2 cut(s) 399, 487
BsiHKAI GWGCWC 3 cut(s) 360, 462, 1194
BsiHKCI CYCGRG 1 cut(s) 35
BsiSI CCGG 4 cut(s) 23, 102, 399, 463
BslFI GGGAC 2 cut(s) 427, 556
BslI CCNNNNNNNGG 4 cut(s) 22, 59, 295, 493
BsmAI GTCTC 2 cut(s) 331, 1153
BsmBI CGTCTC 1 cut(s) 331
BsmFI GGGAC 2 cut(s) 427, 556
BsmI GAATGC 2 cut(s) 303, 1321
BsnI GGCC 4 cut(s) 299, 398, 452, 1248
BsoBI CYCGRG 1 cut(s) 35
Bsp119I TTCGAA 2 cut(s) 348, 693
Bsp120I GGGCCC 1 cut(s) 450
Bsp1286I GDGCHC 5 cut(s) 42, 360, 454, 462, 1194
Bsp1720I GCTNAGC 1 cut(s) 434
Bsp19I CCATGG 1 cut(s) 1237
BspANI GGCC 4 cut(s) 299, 398, 452, 1248
BspCNI CTCAG 2 cut(s) 447, 1073
BspDI ATCGAT 1 cut(s) 1173
BspFNI CGCG 5 cut(s) 378, 489, 491, 634, 833
BspHI TCATGA 1 cut(s) 960
BspLI GGNNCC 4 cut(s) 64, 100, 403, 452
BspPI GGATC 6 cut(s) 212, 380, 592, 600, 908, 1359
BspQI GCTCTTC 1 cut(s) 1355
BspT104I TTCGAA 2 cut(s) 348, 693
BspT107I GGYRCC 2 cut(s) 98, 401
BsrBI CCGCTC 1 cut(s) 201
BsrDI GCAATG 1 cut(s) 42
BsrFI RCCGGY 2 cut(s) 101, 398
BsrI ACTGG 2 cut(s) 445, 1182
BssAI RCCGGY 2 cut(s) 101, 398
BssECI CCNNGG 4 cut(s) 453, 710, 1108, 1237
BssNI GRCGYC 1 cut(s) 1269
BssSI CACGAG 1 cut(s) 353
BssT1I CCWWGG 1 cut(s) 1237
Bst2BI CACGAG 1 cut(s) 353
Bst2UI CCWGG 2 cut(s) 455, 1110
Bst4CI ACNGT 3 cut(s) 112, 996, 1387
Bst6I CTCTTC 1 cut(s) 1355
BstACI GRCGYC 1 cut(s) 1269
BstBAI YACGTR 2 cut(s) 372, 1277
BstBI TTCGAA 2 cut(s) 348, 693
BstC8I GCNNGC 7 cut(s) 301, 400, 421, 481, 810, 837, 1005
BstDEI CTNAG 3 cut(s) 434, 843, 1060
BstDSI CCRYGG 1 cut(s) 1237
BstF5I GGATG 1 cut(s) 144
BstFNI CGCG 5 cut(s) 378, 489, 491, 634, 833
BstH2I RGCGCY 1 cut(s) 506
BstHHI GCGC 6 cut(s) 378, 491, 505, 634, 835, 1229
BstMAI GTCTC 2 cut(s) 331, 1153
BstMCI CGRYCG 2 cut(s) 399, 487
BstMWI GCNNNNNNNGC 6 cut(s) 466, 497, 500, 514, 836, 1198
BstNI CCWGG 2 cut(s) 455, 1110
BstNSI RCATGY 5 cut(s) 483, 649, 839, 1069, 1302
BstSCI CCNGG 3 cut(s) 21, 453, 1108
BstSFI CTRYAG 1 cut(s) 879
BstSLI GKGCMC 2 cut(s) 454, 1194
BstUI CGCG 5 cut(s) 378, 489, 491, 634, 833
BstV1I GCAGC 4 cut(s) 453, 492, 802, 824
BstV2I GAAGAC 1 cut(s) 702
BstX2I RGATCY 1 cut(s) 592
BstXI CCANNNNNNTGG 2 cut(s) 1202, 1244
BstYI RGATCY 1 cut(s) 592
BstZI CGGCCG 1 cut(s) 396
Bsu15I ATCGAT 1 cut(s) 1173
BsuRI GGCC 4 cut(s) 299, 398, 452, 1248
BsuTUI ATCGAT 1 cut(s) 1173
BtgI CCRYGG 1 cut(s) 1237
BtrI CACGTC 3 cut(s) 409, 474, 700
BtsCI GGATG 1 cut(s) 144
BtsIMutI CAGTG 4 cut(s) 452, 753, 992, 1189
Cac8I GCNNGC 7 cut(s) 301, 400, 421, 481, 810, 837, 1005
CaiI CAGNNNCTG 1 cut(s) 818
CciI TCATGA 1 cut(s) 960
CfoI GCGC 6 cut(s) 378, 491, 505, 634, 835, 1229
Cfr10I RCCGGY 2 cut(s) 101, 398
Cfr13I GGNCC 4 cut(s) 450, 451, 1162, 1247
ClaI ATCGAT 1 cut(s) 1173
CseI GACGC 1 cut(s) 1277
Csp6I GTAC 3 cut(s) 70, 655, 1383
CviAII CATG 9 cut(s) 480, 646, 836, 961, 971, 1066, 1087, 1238, 1299
CviQI GTAC 3 cut(s) 70, 655, 1383
DdeI CTNAG 3 cut(s) 434, 843, 1060
DraIII CACNNNGTG 1 cut(s) 996
EaeI YGGCCR 2 cut(s) 297, 396
EagI CGGCCG 1 cut(s) 396
Eam1104I CTCTTC 1 cut(s) 1355
EarI CTCTTC 1 cut(s) 1355
EciI GGCGGA 2 cut(s) 310, 906
Ecl136II GAGCTC 1 cut(s) 358
EclXI CGGCCG 1 cut(s) 396
Eco130I CCWWGG 1 cut(s) 1237
Eco24I GRGCYC 3 cut(s) 42, 360, 454
Eco47I GGWCC 1 cut(s) 1162
Eco52I CGGCCG 1 cut(s) 396
Eco53kI GAGCTC 1 cut(s) 358
Eco57I CTGAAG 2 cut(s) 530, 1215
Eco72I CACGTG 1 cut(s) 372
Eco88I CYCGRG 1 cut(s) 35
EcoICRI GAGCTC 1 cut(s) 358
EcoO109I RGGNCCY 2 cut(s) 451, 1162
EcoRI GAATTC 3 cut(s) 664, 964, 1042
EcoRII CCWGG 2 cut(s) 453, 1108
EcoT14I CCWWGG 1 cut(s) 1237
EcoT38I GRGCYC 3 cut(s) 42, 360, 454
ErhI CCWWGG 1 cut(s) 1237
Esp3I CGTCTC 1 cut(s) 331
FaeI CATG 9 cut(s) 483, 649, 839, 964, 974, 1069, 1090, 1241, 1302
FalI AAGNNNNNCTT 2 cut(s) 197, 229
FaqI GGGAC 2 cut(s) 427, 556
FatI CATG 9 cut(s) 479, 645, 835, 960, 970, 1065, 1086, 1237, 1298
FauI CCCGC 2 cut(s) 229, 794
FauNDI CATATG 1 cut(s) 1356
FbaI TGATCA 1 cut(s) 757
FokI GGATG 1 cut(s) 131
FriOI GRGCYC 3 cut(s) 42, 360, 454
FspBI CTAG 2 cut(s) 116, 1166
GlaI GCGC 6 cut(s) 377, 490, 504, 633, 834, 1228
GsuI CTGGAG 1 cut(s) 293
HaeII RGCGCY 1 cut(s) 506
HaeIII GGCC 4 cut(s) 299, 398, 452, 1248
HapII CCGG 4 cut(s) 23, 102, 399, 463
HgaI GACGC 1 cut(s) 1277
HhaI GCGC 6 cut(s) 378, 491, 505, 634, 835, 1229
Hin1I GRCGYC 1 cut(s) 1269
Hin1II CATG 9 cut(s) 483, 649, 839, 964, 974, 1069, 1090, 1241, 1302
Hin6I GCGC 6 cut(s) 376, 489, 503, 632, 833, 1227
HinP1I GCGC 6 cut(s) 376, 489, 503, 632, 833, 1227
HincII GTYRAC 1 cut(s) 1390
HindII GTYRAC 1 cut(s) 1390
HinfI GANTC 5 cut(s) 26, 256, 440, 1117, 1178
HpaII CCGG 4 cut(s) 23, 102, 399, 463
HphI GGTGA 1 cut(s) 739
Hpy166II GTNNAC 4 cut(s) 643, 905, 1192, 1390
Hpy188I TCNGA 4 cut(s) 7, 597, 1063, 1072
Hpy188III TCNNGA 6 cut(s) 310, 783, 854, 893, 911, 961
Hpy8I GTNNAC 4 cut(s) 643, 905, 1192, 1390
Hpy99I CGWCG 5 cut(s) 59, 98, 410, 1132, 1315
HpyAV CCTTC 5 cut(s) 250, 505, 604, 860, 1260
HpyCH4III ACNGT 3 cut(s) 112, 996, 1387
HpyCH4IV ACGT 5 cut(s) 371, 408, 473, 699, 1276
HpyCH4V TGCA 9 cut(s) 81, 469, 777, 1031, 1092, 1192, 1298, 1321, 1339
HpyF10VI GCNNNNNNNGC 6 cut(s) 466, 497, 500, 514, 836, 1198
HpyF3I CTNAG 3 cut(s) 434, 843, 1060
HpySE526I ACGT 5 cut(s) 371, 408, 473, 699, 1276
Hsp92I GRCGYC 1 cut(s) 1269
Hsp92II CATG 9 cut(s) 483, 649, 839, 964, 974, 1069, 1090, 1241, 1302
HspAI GCGC 6 cut(s) 376, 489, 503, 632, 833, 1227
KroI GCCGGC 1 cut(s) 398
KroNI GCCGGC 1 cut(s) 400
Ksp22I TGATCA 1 cut(s) 757
LguI GCTCTTC 1 cut(s) 1355
LmnI GCTCC 4 cut(s) 206, 465, 514, 1000
Lsp1109I GCAGC 4 cut(s) 453, 492, 802, 824
LweI GCATC 2 cut(s) 1004, 1024
MaeI CTAG 2 cut(s) 116, 1166
MaeII ACGT 5 cut(s) 371, 408, 473, 699, 1276
MaeIII GTNAC 1 cut(s) 883
MbiI CCGCTC 1 cut(s) 201
MboII GAAGA 3 cut(s) 337, 707, 1372
MflI RGATCY 1 cut(s) 592
MhlI GDGCHC 5 cut(s) 42, 360, 454, 462, 1194
MluCI AATT 6 cut(s) 181, 554, 664, 964, 1042, 1291
MlyI GAGTC 3 cut(s) 250, 449, 1111
MmeI TCCRAC 1 cut(s) 1188
MroNI GCCGGC 1 cut(s) 398
MroXI GAANNNNTTC 1 cut(s) 668
MseI TTAA 3 cut(s) 557, 741, 1420
MslI CAYNNNNRTG 1 cut(s) 407
MspA1I CMGCKG 2 cut(s) 75, 815
MspI CCGG 4 cut(s) 23, 102, 399, 463
MspR9I CCNGG 3 cut(s) 23, 455, 1110
Mva1269I GAATGC 2 cut(s) 303, 1321
MvaI CCWGG 2 cut(s) 455, 1110
MvnI CGCG 5 cut(s) 378, 489, 491, 634, 833
MwoI GCNNNNNNNGC 6 cut(s) 466, 497, 500, 514, 836, 1198
NaeI GCCGGC 1 cut(s) 400
NciI CCSGG 1 cut(s) 23
NcoI CCATGG 1 cut(s) 1237
NdeI CATATG 1 cut(s) 1356
NgoMIV GCCGGC 1 cut(s) 398
NlaIII CATG 9 cut(s) 483, 649, 839, 964, 974, 1069, 1090, 1241, 1302
NlaIV GGNNCC 4 cut(s) 64, 100, 403, 452
NmeAIII GCCGAG 1 cut(s) 735
NspI RCATGY 5 cut(s) 483, 649, 839, 1069, 1302
NspV TTCGAA 2 cut(s) 348, 693
OliI CACNNNNGTG 1 cut(s) 407
PaeI GCATGC 2 cut(s) 483, 839
PagI TCATGA 1 cut(s) 960
PciI ACATGT 1 cut(s) 1065
PciSI GCTCTTC 1 cut(s) 1355
PcsI WCGNNNNNNNCGW 1 cut(s) 63
PctI GAATGC 2 cut(s) 303, 1321
PdiI GCCGGC 1 cut(s) 400
PdmI GAANNNNTTC 1 cut(s) 668
PfeI GAWTC 2 cut(s) 26, 1178
PleI GAGTC 3 cut(s) 250, 448, 1111
PmaCI CACGTG 1 cut(s) 372
PmlI CACGTG 1 cut(s) 372
PpsI GAGTC 3 cut(s) 250, 448, 1111
Ppu21I YACGTR 2 cut(s) 372, 1277
PpuMI RGGWCCY 1 cut(s) 1162
PscI ACATGT 1 cut(s) 1065
Psp124BI GAGCTC 1 cut(s) 360
Psp5II RGGWCCY 1 cut(s) 1162
Psp6I CCWGG 2 cut(s) 453, 1108
PspCI CACGTG 1 cut(s) 372
PspGI CCWGG 2 cut(s) 453, 1108
PspN4I GGNNCC 4 cut(s) 64, 100, 403, 452
PspOMI GGGCCC 1 cut(s) 450
PspPI GGNCC 4 cut(s) 450, 451, 1162, 1247
PspPPI RGGWCCY 1 cut(s) 1162
PstNI CAGNNNCTG 1 cut(s) 818
PsuI RGATCY 1 cut(s) 592
PvuII CAGCTG 2 cut(s) 75, 815
RsaI GTAC 3 cut(s) 71, 656, 1384
RsaNI GTAC 3 cut(s) 70, 655, 1383
RseI CAYNNNNRTG 1 cut(s) 407
SacI GAGCTC 1 cut(s) 360
SapI GCTCTTC 1 cut(s) 1355
SaqAI TTAA 3 cut(s) 557, 741, 1420
Sau96I GGNCC 4 cut(s) 450, 451, 1162, 1247
SchI GAGTC 3 cut(s) 250, 449, 1111
ScrFI CCNGG 3 cut(s) 23, 455, 1110
SduI GDGCHC 5 cut(s) 42, 360, 454, 462, 1194
SfaNI GCATC 2 cut(s) 1004, 1024
SfcI CTRYAG 1 cut(s) 879
SfuI TTCGAA 2 cut(s) 348, 693
SinI GGWCC 1 cut(s) 1162
SmiMI CAYNNNNRTG 1 cut(s) 407
SmlI CTYRAG 1 cut(s) 587
SmoI CTYRAG 1 cut(s) 587
SphI GCATGC 2 cut(s) 483, 839
Sse9I AATT 6 cut(s) 181, 554, 664, 964, 1042, 1291
SspMI CTAG 2 cut(s) 116, 1166
SstI GAGCTC 1 cut(s) 360
StyD4I CCNGG 3 cut(s) 21, 453, 1108
StyI CCWWGG 1 cut(s) 1237
TaaI ACNGT 3 cut(s) 112, 996, 1387
TaiI ACGT 5 cut(s) 374, 411, 476, 702, 1279
TaqI TCGA 6 cut(s) 216, 282, 348, 693, 1130, 1173
TasI AATT 6 cut(s) 181, 554, 664, 964, 1042, 1291
TatI WGTACW 2 cut(s) 69, 1382
TauI GCSGC 6 cut(s) 494, 497, 500, 503, 739, 833
TfiI GAWTC 2 cut(s) 26, 1178
Tru1I TTAA 3 cut(s) 557, 741, 1420
Tru9I TTAA 3 cut(s) 557, 741, 1420
TscAI CASTG 4 cut(s) 452, 760, 999, 1189
TseI GCWGC 4 cut(s) 466, 505, 812, 815
TspDTI ATGAA 3 cut(s) 977, 1373, 1401
TspGWI ACGGA 2 cut(s) 996, 1299
TspRI CASTG 4 cut(s) 452, 760, 999, 1189
VneI GTGCAC 1 cut(s) 1190
VpaK11BI GGWCC 1 cut(s) 1162
XapI RAATTY 4 cut(s) 181, 664, 964, 1042
XceI RCATGY 5 cut(s) 483, 649, 839, 1069, 1302
XmnI GAANNNNTTC 1 cut(s) 668
XspI CTAG 2 cut(s) 116, 1166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.