RLG00000023933

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0014060
Physical Location & Seq
Forward (+)
30221819 .. 30224414
2596 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000023933

Sequence Viewer

Length: 1410 bp
ATGTCAGACCAGAACCCCAACCCGGAATCAACGCCCGAGCCCATTGCCCGACCCGTCGGTGGAACCGAGTACAGCTGGTGCAAAGCCGTTCCCGTCGGCACCGGCATAACCGTCCTAGCTCTTCTCCTCACTAAACCCCCAAACATCCCACTTCTCCAAAATGCCCTCCACAACCTCCAAAACTCCCACCCTATCCTCCGCTCCAAGCACCAATTCGATCCCGCCACCAACACCCACTCCTTCCTCACTCCCCCGACTCCCCACCTCCAAATCCAGCCGTTCGATCTCCCATCAACGGCCAGCATTCTCCAGACCCACTCCGCCGTCTCCCCATTCCATCAAATCCTCGAACACGAGCTCAACCTCAACACGTGGCGCGACCCCGATCCTCCTTCGGCCGGCACCGACGTGTTGTTCGCCAGCACGTACACTCTCGGCGAGTCCCAGTGGGCCCTGGTGATCCGGCTGCACACGTCAGCATGCGACCGCGCGGCGGCGGTGGCACTGCTGAAGGAGCTGCTGGGGTCGGTCGGCGGAGGAGGAGGAGGGACAGAGAGGGAATTAAAAGGAAATGGGGAGGTTATCTCGGCACTTGAGGATCTGATCCCAAATGGGAAGGCGAACAAGCCGTTCTGGGCGCGTGGGGTGGACATGCTTGGGTACTCTTTGAATTCGTTGAGGCTGTCCAATATAGAGTTCAAAGACGTGAATTTGGCGAGGACTACCCAGATGGTGAGGCTGCGGCTTAACCCAGAACACACCGATAAGCTTCTTGCTGGTTGTAAGTCCAGAGGAATAAAACTATGCGGGGTGCTGGCAGCTGCTGGATTGATTGCCGCGCATGCCTCTAAGCACCTTCCGGATCATCAATGGGAAAAGTATGCTGTAGTAACGCTTCTTGACTGCCGTTCACTTCTTGATCCACCACTTTCTGCCAATGATTTTGGTTTTTATCATTCTGCCATCATGAATTCACATGACATAAATGGAGAAAACACACTGTGGGAGCTGGCAAAGAGATGCTACACAGCCTTTGCAGATGCCAAGAATTCTAACAAGCATTTCTCAGACATGTCAGACCTGAACTTCCTCATGTGCAAGGCTATTGAAAACCCTGGTTTGACTCCATCGTCGTCGATGAGAACTGCCTTTGTCTCGGTGTTTGAGGACCTAGTGATCGATGATTCCAGTGAAGTGCACCAAGAGCTTGGGTTGGAGGACTACGAGGGGTGCGCTTCAGTCCATGGTGTTGGCCCTTCCATAGCTATTTTTGACGCCATACGTGATGGAGGATTGAATTGTGCATGTGTTTATCCATCGCCCTTGCATTCAAGGGAACAAATGCGAGACTTGATGGATCATATGAAGAGCATTCTTGTAGATGGTAGTAATGTTGAGAATGAGAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AATase

Protein Analysis

470

Amino Acids

51.06

Weight (kDa)

5.57

Isoelectric Point (pI)

38.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PapA_C PF16911 242 - 345 4.1e-10 Phthiocerol/phthiodiolone dimycocerosyl transferase C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014060)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G52610
fragaria_vesca FvH4_6g19190
malus_domestica MD12G1027700.v1.1
prunus_persica Prupe.7G103700_v2.0.a1 Prupe.7G103700_v2.0.a1 Prupe.7G103900_v2.0.a1
pyrus_communis pycom12g02650
rosa_chinensis RchiOBHm_Chr3g0474311
rosa_laevigata RLG00000023933
rosa_multiflora Rmu_sc0004507.1_g000012
rosa_roxburghii Rroxscaffold_6G00407370
rosa_rugosa Rorug03G0140000
rosa_samantha Rh3AG190700 Rh3BG219900 Rh3CG215100 Rh3DG215600
rosa_wichuraiana Rw3G017400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1129
AccB1I GGYRCC 2 cut(s) 98, 401
AccBSI CCGCTC 1 cut(s) 201
AccII CGCG 5 cut(s) 378, 489, 491, 640, 839
AccIII TCCGGA 1 cut(s) 859
AclWI GGATC 8 cut(s) 212, 380, 454, 598, 606, 870, 914, 1365
AcoI YGGCCR 2 cut(s) 297, 396
AcsI RAATTY 4 cut(s) 670, 709, 970, 1048
AcuI CTGAAG 2 cut(s) 530, 1221
AcvI CACGTG 1 cut(s) 372
AcyI GRCGYC 1 cut(s) 1275
AdeI CACNNNGTG 1 cut(s) 1002
AfaI GTAC 3 cut(s) 71, 428, 662
AfiI CCNNNNNNNGG 5 cut(s) 22, 59, 295, 398, 493
AflIII ACRYGT 4 cut(s) 369, 408, 471, 1071
AgsI TTSAA 5 cut(s) 670, 700, 1109, 1297, 1332
AjiI CACGTC 3 cut(s) 409, 474, 706
AjnI CCWGG 2 cut(s) 453, 1114
AjuI GAANNNNNNNTTGG 4 cut(s) 197, 229, 680, 712
AleI CACNNNNGTG 1 cut(s) 407
Alw21I GWGCWC 2 cut(s) 360, 1200
Alw26I GTCTC 3 cut(s) 331, 1159, 1341
Alw44I GTGCAC 1 cut(s) 1196
AlwI GGATC 8 cut(s) 212, 380, 454, 598, 606, 870, 914, 1365
AlwNI CAGNNNCTG 1 cut(s) 824
Ama87I CYCGRG 1 cut(s) 35
Aor13HI TCCGGA 1 cut(s) 859
AoxI GGCC 4 cut(s) 297, 396, 450, 1252
ApaI GGGCCC 1 cut(s) 454
ApaLI GTGCAC 1 cut(s) 1196
ApeKI GCWGC 5 cut(s) 466, 517, 739, 818, 821
ApoI RAATTY 4 cut(s) 670, 709, 970, 1048
ArsI GACNNNNNNTTYG 2 cut(s) 398, 430
AspLEI GCGC 5 cut(s) 378, 491, 640, 841, 1235
AspS9I GGNCC 4 cut(s) 450, 451, 1168, 1253
AsuC2I CCSGG 1 cut(s) 23
AsuHPI GGTGA 2 cut(s) 469, 745
AvaI CYCGRG 1 cut(s) 35
AvaII GGWCC 1 cut(s) 1168
BaeGI GKGCMC 2 cut(s) 454, 1200
BanI GGYRCC 2 cut(s) 98, 401
BanII GRGCYC 3 cut(s) 42, 360, 454
BarI GAAGNNNNNNTAC 2 cut(s) 879, 911
BauI CACGAG 1 cut(s) 353
BbrPI CACGTG 1 cut(s) 372
Bbv12I GWGCWC 2 cut(s) 360, 1200
BbvI GCAGC 5 cut(s) 453, 504, 726, 808, 830
BccI CCATC 9 cut(s) 298, 345, 724, 971, 1135, 1280, 1324, 1348, 1376
BceAI ACGGC 6 cut(s) 71, 262, 308, 312, 613, 891
BcgI CGANNNNNNTGC 2 cut(s) 26, 60
BciT130I CCWGG 2 cut(s) 455, 1116
BcnI CCSGG 1 cut(s) 23
BcoDI GTCTC 3 cut(s) 331, 1159, 1341
BfaI CTAG 3 cut(s) 116, 1172, 1408
BfmI CTRYAG 1 cut(s) 885
BisI GCNGC 9 cut(s) 467, 492, 495, 518, 740, 743, 819, 822, 837
BlsI GCNGC 9 cut(s) 468, 493, 496, 519, 741, 744, 820, 823, 838
Bme1390I CCNGG 3 cut(s) 23, 455, 1116
Bme18I GGWCC 1 cut(s) 1168
BmeT110I CYCGRG 1 cut(s) 35
BmgBI CACGTC 3 cut(s) 409, 474, 706
BmgT120I GGNCC 4 cut(s) 450, 451, 1168, 1253
BmiI GGNNCC 4 cut(s) 64, 100, 403, 452
BmrFI CCNGG 3 cut(s) 23, 455, 1116
BmrI ACTGGG 1 cut(s) 439
BmsI GCATC 2 cut(s) 1010, 1030
BmuI ACTGGG 1 cut(s) 439
BplI GAGNNNNNCTC 2 cut(s) 569, 601
BpmI CTGGAG 1 cut(s) 293
BpuEI CTTGAG 1 cut(s) 614
BpuMI CCSGG 1 cut(s) 23
Bsa29I ATCGAT 1 cut(s) 1179
BsaAI YACGTR 3 cut(s) 372, 426, 1283
BsaHI GRCGYC 1 cut(s) 1275
BsaJI CCNNGG 3 cut(s) 453, 1114, 1243
BsaWI WCCGGW 1 cut(s) 859
BsaXI ACNNNNNCTCC 2 cut(s) 221, 251
Bsc4I CCNNNNNNNGG 5 cut(s) 22, 59, 295, 398, 493
Bse118I RCCGGY 2 cut(s) 101, 398
Bse1I ACTGG 2 cut(s) 445, 1188
Bse3DI GCAATG 1 cut(s) 42
BseAI TCCGGA 1 cut(s) 859
BseBI CCWGG 2 cut(s) 455, 1116
BseCI ATCGAT 1 cut(s) 1179
BseDI CCNNGG 3 cut(s) 453, 1114, 1243
BseGI GGATG 1 cut(s) 144
BseLI CCNNNNNNNGG 5 cut(s) 22, 59, 295, 398, 493
BseMI GCAATG 1 cut(s) 42
BseMII CTCAG 1 cut(s) 1080
BseNI ACTGG 2 cut(s) 445, 1188
BseRI GAGGAG 4 cut(s) 116, 552, 555, 558
BseSI GKGCMC 2 cut(s) 454, 1200
BseX3I CGGCCG 1 cut(s) 396
BseXI GCAGC 5 cut(s) 453, 504, 726, 808, 830
BseYI CCCAGC 1 cut(s) 520
BsgI GTGCAG 1 cut(s) 452
Bsh1236I CGCG 5 cut(s) 378, 489, 491, 640, 839
Bsh1285I CGRYCG 3 cut(s) 399, 487, 531
BshFI GGCC 4 cut(s) 299, 398, 452, 1254
BshNI GGYRCC 2 cut(s) 98, 401
BshVI ATCGAT 1 cut(s) 1179
BsiEI CGRYCG 3 cut(s) 399, 487, 531
BsiHKAI GWGCWC 2 cut(s) 360, 1200
BsiHKCI CYCGRG 1 cut(s) 35
BsiSI CCGG 5 cut(s) 23, 102, 399, 463, 860
BslFI GGGAC 2 cut(s) 427, 562
BslI CCNNNNNNNGG 5 cut(s) 22, 59, 295, 398, 493
BsmAI GTCTC 3 cut(s) 331, 1159, 1341
BsmBI CGTCTC 1 cut(s) 331
BsmFI GGGAC 2 cut(s) 427, 562
BsmI GAATGC 3 cut(s) 303, 1327, 1371
BsnI GGCC 4 cut(s) 299, 398, 452, 1254
BsoBI CYCGRG 1 cut(s) 35
Bsp120I GGGCCC 1 cut(s) 450
Bsp1286I GDGCHC 4 cut(s) 42, 360, 454, 1200
Bsp13I TCCGGA 1 cut(s) 859
Bsp19I CCATGG 1 cut(s) 1243
BspANI GGCC 4 cut(s) 299, 398, 452, 1254
BspCNI CTCAG 1 cut(s) 1079
BspDI ATCGAT 1 cut(s) 1179
BspEI TCCGGA 1 cut(s) 859
BspFNI CGCG 5 cut(s) 378, 489, 491, 640, 839
BspHI TCATGA 1 cut(s) 966
BspLI GGNNCC 4 cut(s) 64, 100, 403, 452
BspPI GGATC 8 cut(s) 212, 380, 454, 598, 606, 870, 914, 1365
BspQI GCTCTTC 2 cut(s) 126, 1361
BspT107I GGYRCC 2 cut(s) 98, 401
BsrBI CCGCTC 1 cut(s) 201
BsrDI GCAATG 1 cut(s) 42
BsrFI RCCGGY 2 cut(s) 101, 398
BsrI ACTGG 2 cut(s) 445, 1188
BssAI RCCGGY 2 cut(s) 101, 398
BssECI CCNNGG 3 cut(s) 453, 1114, 1243
BssNI GRCGYC 1 cut(s) 1275
BssSI CACGAG 1 cut(s) 353
BssT1I CCWWGG 1 cut(s) 1243
Bst2BI CACGAG 1 cut(s) 353
Bst2UI CCWGG 2 cut(s) 455, 1116
Bst4CI ACNGT 2 cut(s) 112, 1002
Bst6I CTCTTC 2 cut(s) 126, 1361
BstACI GRCGYC 1 cut(s) 1275
BstBAI YACGTR 3 cut(s) 372, 426, 1283
BstC8I GCNNGC 7 cut(s) 301, 400, 421, 481, 816, 843, 1011
BstDEI CTNAG 2 cut(s) 849, 1066
BstDSI CCRYGG 1 cut(s) 1243
BstF5I GGATG 1 cut(s) 144
BstFNI CGCG 5 cut(s) 378, 489, 491, 640, 839
BstHHI GCGC 5 cut(s) 378, 491, 640, 841, 1235
BstMAI GTCTC 3 cut(s) 331, 1159, 1341
BstMCI CGRYCG 3 cut(s) 399, 487, 531
BstMWI GCNNNNNNNGC 4 cut(s) 500, 514, 842, 1204
BstNI CCWGG 2 cut(s) 455, 1116
BstNSI RCATGY 5 cut(s) 483, 655, 845, 1075, 1308
BstSCI CCNGG 3 cut(s) 21, 453, 1114
BstSFI CTRYAG 1 cut(s) 885
BstSLI GKGCMC 2 cut(s) 454, 1200
BstUI CGCG 5 cut(s) 378, 489, 491, 640, 839
BstV1I GCAGC 5 cut(s) 453, 504, 726, 808, 830
BstX2I RGATCY 1 cut(s) 598
BstXI CCANNNNNNTGG 2 cut(s) 1208, 1250
BstYI RGATCY 1 cut(s) 598
BstZI CGGCCG 1 cut(s) 396
Bsu15I ATCGAT 1 cut(s) 1179
BsuRI GGCC 4 cut(s) 299, 398, 452, 1254
BsuTUI ATCGAT 1 cut(s) 1179
BtgI CCRYGG 1 cut(s) 1243
BtgZI GCGATG 1 cut(s) 1302
BtrI CACGTC 3 cut(s) 409, 474, 706
BtsCI GGATG 1 cut(s) 144
BtsI GCAGTG 1 cut(s) 503
BtsIMutI CAGTG 4 cut(s) 452, 503, 998, 1195
Cac8I GCNNGC 7 cut(s) 301, 400, 421, 481, 816, 843, 1011
CaiI CAGNNNCTG 1 cut(s) 824
CciI TCATGA 1 cut(s) 966
CfoI GCGC 5 cut(s) 378, 491, 640, 841, 1235
Cfr10I RCCGGY 2 cut(s) 101, 398
Cfr13I GGNCC 4 cut(s) 450, 451, 1168, 1253
ClaI ATCGAT 1 cut(s) 1179
CseI GACGC 1 cut(s) 1283
Csp6I GTAC 3 cut(s) 70, 427, 661
CviAII CATG 9 cut(s) 480, 652, 842, 967, 977, 1072, 1093, 1244, 1305
CviQI GTAC 3 cut(s) 70, 427, 661
DdeI CTNAG 2 cut(s) 849, 1066
DraIII CACNNNGTG 1 cut(s) 1002
DrdI GACNNNNNNGTC 1 cut(s) 1129
DseDI GACNNNNNNGTC 1 cut(s) 1129
EaeI YGGCCR 2 cut(s) 297, 396
EagI CGGCCG 1 cut(s) 396
Eam1104I CTCTTC 2 cut(s) 126, 1361
EarI CTCTTC 2 cut(s) 126, 1361
EciI GGCGGA 2 cut(s) 310, 549
Ecl136II GAGCTC 1 cut(s) 358
EclXI CGGCCG 1 cut(s) 396
Eco130I CCWWGG 1 cut(s) 1243
Eco24I GRGCYC 3 cut(s) 42, 360, 454
Eco47I GGWCC 1 cut(s) 1168
Eco52I CGGCCG 1 cut(s) 396
Eco53kI GAGCTC 1 cut(s) 358
Eco57I CTGAAG 2 cut(s) 530, 1221
Eco72I CACGTG 1 cut(s) 372
Eco88I CYCGRG 1 cut(s) 35
EcoICRI GAGCTC 1 cut(s) 358
EcoO109I RGGNCCY 2 cut(s) 451, 1168
EcoRI GAATTC 3 cut(s) 670, 970, 1048
EcoRII CCWGG 2 cut(s) 453, 1114
EcoT14I CCWWGG 1 cut(s) 1243
EcoT38I GRGCYC 3 cut(s) 42, 360, 454
ErhI CCWWGG 1 cut(s) 1243
Esp3I CGTCTC 1 cut(s) 331
FaeI CATG 9 cut(s) 483, 655, 845, 970, 980, 1075, 1096, 1247, 1308
FaqI GGGAC 2 cut(s) 427, 562
FatI CATG 9 cut(s) 479, 651, 841, 966, 976, 1071, 1092, 1243, 1304
FauI CCCGC 2 cut(s) 229, 800
FauNDI CATATG 1 cut(s) 1362
Fnu4HI GCNGC 9 cut(s) 467, 492, 495, 518, 740, 743, 819, 822, 837
FokI GGATG 1 cut(s) 131
FriOI GRGCYC 3 cut(s) 42, 360, 454
Fsp4HI GCNGC 9 cut(s) 467, 492, 495, 518, 740, 743, 819, 822, 837
FspBI CTAG 3 cut(s) 116, 1172, 1408
GlaI GCGC 5 cut(s) 377, 490, 639, 840, 1234
GluI GCNGC 9 cut(s) 467, 492, 495, 518, 740, 743, 819, 822, 837
GsaI CCCAGC 1 cut(s) 524
GsuI CTGGAG 1 cut(s) 293
HaeIII GGCC 4 cut(s) 299, 398, 452, 1254
HapII CCGG 5 cut(s) 23, 102, 399, 463, 860
HgaI GACGC 1 cut(s) 1283
HhaI GCGC 5 cut(s) 378, 491, 640, 841, 1235
Hin1I GRCGYC 1 cut(s) 1275
Hin1II CATG 9 cut(s) 483, 655, 845, 970, 980, 1075, 1096, 1247, 1308
Hin6I GCGC 5 cut(s) 376, 489, 638, 839, 1233
HinP1I GCGC 5 cut(s) 376, 489, 638, 839, 1233
HindIII AAGCTT 1 cut(s) 767
HinfI GANTC 5 cut(s) 26, 256, 440, 1123, 1184
HpaII CCGG 5 cut(s) 23, 102, 399, 463, 860
HphI GGTGA 2 cut(s) 469, 745
Hpy166II GTNNAC 4 cut(s) 429, 649, 911, 1198
Hpy188I TCNGA 4 cut(s) 7, 603, 1069, 1078
Hpy188III TCNNGA 6 cut(s) 310, 789, 860, 899, 917, 967
Hpy8I GTNNAC 4 cut(s) 429, 649, 911, 1198
Hpy99I CGWCG 5 cut(s) 59, 98, 410, 1135, 1138
HpyAV CCTTC 6 cut(s) 250, 402, 505, 610, 866, 1266
HpyCH4III ACNGT 2 cut(s) 112, 1002
HpyCH4IV ACGT 6 cut(s) 371, 408, 425, 473, 705, 1282
HpyCH4V TGCA 7 cut(s) 81, 469, 1037, 1098, 1198, 1304, 1327
HpyF10VI GCNNNNNNNGC 4 cut(s) 500, 514, 842, 1204
HpyF3I CTNAG 2 cut(s) 849, 1066
HpySE526I ACGT 6 cut(s) 371, 408, 425, 473, 705, 1282
Hsp92I GRCGYC 1 cut(s) 1275
Hsp92II CATG 9 cut(s) 483, 655, 845, 970, 980, 1075, 1096, 1247, 1308
HspAI GCGC 5 cut(s) 376, 489, 638, 839, 1233
Kpn2I TCCGGA 1 cut(s) 859
KroI GCCGGC 1 cut(s) 398
KroNI GCCGGC 1 cut(s) 400
LguI GCTCTTC 2 cut(s) 126, 1361
LmnI GCTCC 3 cut(s) 206, 514, 1006
Lsp1109I GCAGC 5 cut(s) 453, 504, 726, 808, 830
LweI GCATC 2 cut(s) 1010, 1030
MaeI CTAG 3 cut(s) 116, 1172, 1408
MaeII ACGT 6 cut(s) 371, 408, 425, 473, 705, 1282
MaeIII GTNAC 1 cut(s) 889
MbiI CCGCTC 1 cut(s) 201
MboII GAAGA 2 cut(s) 113, 1378
MflI RGATCY 1 cut(s) 598
MhlI GDGCHC 4 cut(s) 42, 360, 454, 1200
MluCI AATT 7 cut(s) 212, 560, 670, 709, 970, 1048, 1297
MlyI GAGTC 3 cut(s) 250, 449, 1117
MmeI TCCRAC 1 cut(s) 1194
MroI TCCGGA 1 cut(s) 859
MroNI GCCGGC 1 cut(s) 398
MseI TTAA 2 cut(s) 563, 747
MslI CAYNNNNRTG 1 cut(s) 407
MspA1I CMGCKG 2 cut(s) 75, 821
MspI CCGG 5 cut(s) 23, 102, 399, 463, 860
MspR9I CCNGG 3 cut(s) 23, 455, 1116
Mva1269I GAATGC 3 cut(s) 303, 1327, 1371
MvaI CCWGG 2 cut(s) 455, 1116
MvnI CGCG 5 cut(s) 378, 489, 491, 640, 839
MwoI GCNNNNNNNGC 4 cut(s) 500, 514, 842, 1204
NaeI GCCGGC 1 cut(s) 400
NciI CCSGG 1 cut(s) 23
NcoI CCATGG 1 cut(s) 1243
NdeI CATATG 1 cut(s) 1362
NgoMIV GCCGGC 1 cut(s) 398
NlaIII CATG 9 cut(s) 483, 655, 845, 970, 980, 1075, 1096, 1247, 1308
NlaIV GGNNCC 4 cut(s) 64, 100, 403, 452
NmeAIII GCCGAG 2 cut(s) 414, 566
NspI RCATGY 5 cut(s) 483, 655, 845, 1075, 1308
OliI CACNNNNGTG 1 cut(s) 407
PaeI GCATGC 2 cut(s) 483, 845
PagI TCATGA 1 cut(s) 966
PciI ACATGT 1 cut(s) 1071
PciSI GCTCTTC 2 cut(s) 126, 1361
PcsI WCGNNNNNNNCGW 1 cut(s) 63
PctI GAATGC 3 cut(s) 303, 1327, 1371
PdiI GCCGGC 1 cut(s) 400
PfeI GAWTC 2 cut(s) 26, 1184
PkrI GCNGC 9 cut(s) 468, 493, 496, 519, 741, 744, 820, 823, 838
PleI GAGTC 3 cut(s) 250, 448, 1117
PmaCI CACGTG 1 cut(s) 372
PmlI CACGTG 1 cut(s) 372
PpsI GAGTC 3 cut(s) 250, 448, 1117
Ppu21I YACGTR 3 cut(s) 372, 426, 1283
PpuMI RGGWCCY 1 cut(s) 1168
PscI ACATGT 1 cut(s) 1071
Psp124BI GAGCTC 1 cut(s) 360
Psp5II RGGWCCY 1 cut(s) 1168
Psp6I CCWGG 2 cut(s) 453, 1114
PspCI CACGTG 1 cut(s) 372
PspFI CCCAGC 1 cut(s) 520
PspGI CCWGG 2 cut(s) 453, 1114
PspN4I GGNNCC 4 cut(s) 64, 100, 403, 452
PspOMI GGGCCC 1 cut(s) 450
PspPI GGNCC 4 cut(s) 450, 451, 1168, 1253
PspPPI RGGWCCY 1 cut(s) 1168
PstNI CAGNNNCTG 1 cut(s) 824
PsuI RGATCY 1 cut(s) 598
PvuII CAGCTG 2 cut(s) 75, 821
RsaI GTAC 3 cut(s) 71, 428, 662
RsaNI GTAC 3 cut(s) 70, 427, 661
RseI CAYNNNNRTG 1 cut(s) 407
SacI GAGCTC 1 cut(s) 360
SapI GCTCTTC 2 cut(s) 126, 1361
SaqAI TTAA 2 cut(s) 563, 747
SatI GCNGC 9 cut(s) 467, 492, 495, 518, 740, 743, 819, 822, 837
Sau96I GGNCC 4 cut(s) 450, 451, 1168, 1253
SchI GAGTC 3 cut(s) 250, 449, 1117
ScrFI CCNGG 3 cut(s) 23, 455, 1116
SduI GDGCHC 4 cut(s) 42, 360, 454, 1200
SfaNI GCATC 2 cut(s) 1010, 1030
SfcI CTRYAG 1 cut(s) 885
SinI GGWCC 1 cut(s) 1168
SmiMI CAYNNNNRTG 1 cut(s) 407
SmlI CTYRAG 1 cut(s) 593
SmoI CTYRAG 1 cut(s) 593
SphI GCATGC 2 cut(s) 483, 845
Sse9I AATT 7 cut(s) 212, 560, 670, 709, 970, 1048, 1297
SspMI CTAG 3 cut(s) 116, 1172, 1408
SstI GAGCTC 1 cut(s) 360
StyD4I CCNGG 3 cut(s) 21, 453, 1114
StyI CCWWGG 1 cut(s) 1243
TaaI ACNGT 2 cut(s) 112, 1002
TaiI ACGT 6 cut(s) 374, 411, 428, 476, 708, 1285
TaqI TCGA 5 cut(s) 216, 282, 348, 1136, 1179
TaqII GACCGA 1 cut(s) 517
TasI AATT 7 cut(s) 212, 560, 670, 709, 970, 1048, 1297
TatI WGTACW 1 cut(s) 69
TauI GCSGC 4 cut(s) 494, 497, 745, 839
TfiI GAWTC 2 cut(s) 26, 1184
Tru1I TTAA 2 cut(s) 563, 747
Tru9I TTAA 2 cut(s) 563, 747
TscAI CASTG 4 cut(s) 452, 510, 1005, 1195
TseI GCWGC 5 cut(s) 466, 517, 739, 818, 821
TspDTI ATGAA 2 cut(s) 983, 1379
TspRI CASTG 4 cut(s) 452, 510, 1005, 1195
VneI GTGCAC 1 cut(s) 1196
VpaK11BI GGWCC 1 cut(s) 1168
XapI RAATTY 4 cut(s) 670, 709, 970, 1048
XceI RCATGY 5 cut(s) 483, 655, 845, 1075, 1308
XspI CTAG 3 cut(s) 116, 1172, 1408
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.