Rw3G017400

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0014060
Physical Location & Seq
Reverse (-)
18796787 .. 18800086
3300 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G017400.1

Sequence Viewer

Length: 1404 bp
ATGTCAGACCAGAACCCCAACCCGGAATCAACGCCCAAGCCCATTGCCCGACCCGTCGGTGGAACCGAGTACAGCTGGTGCAAAGCCGTTCCCGTCGGCACCGGCATAACCGTCCTAGCTCTCCTCCTCACTAAACCCCCAAACATCCCACTTCTCCAAAATGCCCTCCACAAGCTCCAAAATTCCCACCCTATCCTCCGATCCAAGCACCAATTCGATCCCGCCACCAACACCCACTCCTTCCTCACTCCCCCGACTCCCCACCTCCAAATCCAGCCGTTCGATCTCCCATCAACGGCCAGCATTCTCCAGACCCACTCCGCCGTCTCCCCATTCCATCAAATCCTCGAGCACGAGCTCAACCTCAACACGTGGCGCGACCCCGATCCTCCGTCGGCCGGCACCGACGTGTTGTTCGCCAGCACGTACACGCTCAGCGAGTCCCAGTGGGCCCTGGTGCTCCGGCTGCACACGTCAGCATGCGACCGCGCGTCGGCGGCGGCGCTGCTGAAGGAGCTGTTGGGGTCGGTTGGGGGAGGAGGGACAGAGAGGGAATTAAAAGGAAATGGGGAGGTTATTTCGGCACTTGAGGATCTGATCCCAAATGGGAAGGCGAACAAGCCGTTCTGGGCGCGTGGGGTGGACATGCTTGGGTACTCTTTGAATTCGTTCAGGCTGTCCAATATAGAGTTCAAAGACGTCAATTTGCCGAGGACTACCCAGATGGTGAAGTTGCGGCTTAACCCAGAACACACTGATAAGCTTCTTGCTGGTTGCAAGTCCAGGGGAATAAAACTATGCGGGCTGCTGGCAGCTGCTGGATTGATTGCCGCGCATGCCTCTAAGCACCTTCCCGATCATCAATGGGAAAAGTATGCTGTAGTAACGCTTCTTGACTGCCGTTCACTTCTTGATCCACCACTTTCTGCAAATGATTTTGGTTTTTATCATTCTGCCATCATGAATTCACATGACATAAACGGAGAAAACACACTGTGGGAGCTGGCAAAGAGATGCTACACAGCCTTTGCAGATGCCAAGAATTCTAACAAGCATTTCTCAGACATGTCAGACCTGAACTTCCTCATGTGCAAGGCTATCGAAAACCCTGGTTTGACTCCATCGTCGTCGATGAGAACTGCCTTTGTCTCGGTGTTTGAGGACCTAGTGATCGATGATTCCAGTGAAGTGCACCAAGAGCTTGGGTTGGAGGACTACGAGGGGTGCGCTTCAGTCCATGGTGTTGGCCCTTCCATAGCTATTTTTGACGCCATACGTGATGGAGGATTGAATTGTGCATGTGTTTATCCGTCGCCCTTGCATTCAAGGGAACAAATGCAAGGCTTGATGGATCATATGAAGAGCGTTCTTGTAGATGGTTGTAATGTTGACAGCGAGAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AATase

Protein Analysis

467

Amino Acids

50.9

Weight (kDa)

5.76

Isoelectric Point (pI)

37.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PapA_C PF16911 239 - 343 5.6e-10 Phthiocerol/phthiodiolone dimycocerosyl transferase C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014060)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G52610
fragaria_vesca FvH4_6g19190
malus_domestica MD12G1027700.v1.1
prunus_persica Prupe.7G103700_v2.0.a1 Prupe.7G103700_v2.0.a1 Prupe.7G103900_v2.0.a1
pyrus_communis pycom12g02650
rosa_chinensis RchiOBHm_Chr3g0474311
rosa_laevigata RLG00000023933
rosa_multiflora Rmu_sc0004507.1_g000012
rosa_roxburghii Rroxscaffold_6G00407370
rosa_rugosa Rorug03G0140000
rosa_samantha Rh3AG190700 Rh3BG219900 Rh3CG215100 Rh3DG215600
rosa_wichuraiana Rw3G017400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1123
AatII GACGTC 1 cut(s) 702
AccB1I GGYRCC 2 cut(s) 98, 401
AccII CGCG 5 cut(s) 378, 489, 491, 634, 833
AciI CCGC 8 cut(s) 222, 321, 487, 497, 500, 736, 801, 831
AclWI GGATC 7 cut(s) 195, 212, 380, 592, 600, 908, 1359
AcoI YGGCCR 2 cut(s) 297, 396
AcsI RAATTY 4 cut(s) 181, 664, 964, 1042
AcuI CTGAAG 2 cut(s) 530, 1215
AcvI CACGTG 1 cut(s) 372
AcyI GRCGYC 2 cut(s) 699, 1269
AdeI CACNNNGTG 1 cut(s) 996
AfaI GTAC 3 cut(s) 71, 428, 656
AfiI CCNNNNNNNGG 5 cut(s) 22, 59, 295, 398, 493
AflIII ACRYGT 4 cut(s) 369, 408, 471, 1065
AgsI TTSAA 4 cut(s) 664, 694, 1291, 1326
AhdI GACNNNNNGTC 1 cut(s) 490
AjiI CACGTC 2 cut(s) 409, 474
AjnI CCWGG 3 cut(s) 453, 782, 1108
AjuI GAANNNNNNNTTGG 6 cut(s) 197, 229, 503, 535, 674, 706
AleI CACNNNNGTG 1 cut(s) 407
Alw21I GWGCWC 4 cut(s) 354, 360, 462, 1194
Alw26I GTCTC 2 cut(s) 331, 1153
Alw44I GTGCAC 1 cut(s) 1190
AlwI GGATC 7 cut(s) 195, 212, 380, 592, 600, 908, 1359
AlwNI CAGNNNCTG 1 cut(s) 818
Ama87I CYCGRG 1 cut(s) 347
AoxI GGCC 4 cut(s) 297, 396, 450, 1246
ApaI GGGCCC 1 cut(s) 454
ApaLI GTGCAC 1 cut(s) 1190
ApeKI GCWGC 5 cut(s) 466, 505, 805, 812, 815
ApoI RAATTY 4 cut(s) 181, 664, 964, 1042
ArsI GACNNNNNNTTYG 2 cut(s) 398, 430
Asp700I GAANNNNTTC 1 cut(s) 668
AspLEI GCGC 6 cut(s) 378, 491, 505, 634, 835, 1229
AspS9I GGNCC 4 cut(s) 450, 451, 1162, 1247
AsuC2I CCSGG 1 cut(s) 23
AsuHPI GGTGA 1 cut(s) 739
AvaI CYCGRG 1 cut(s) 347
AvaII GGWCC 1 cut(s) 1162
BaeGI GKGCMC 2 cut(s) 454, 1194
BanI GGYRCC 2 cut(s) 98, 401
BanII GRGCYC 2 cut(s) 360, 454
BarI GAAGNNNNNNTAC 2 cut(s) 873, 905
BauI CACGAG 1 cut(s) 353
BbrPI CACGTG 1 cut(s) 372
Bbv12I GWGCWC 4 cut(s) 354, 360, 462, 1194
BbvI GCAGC 5 cut(s) 453, 492, 792, 802, 824
BccI CCATC 8 cut(s) 298, 345, 718, 965, 1129, 1274, 1342, 1370
BceAI ACGGC 6 cut(s) 71, 262, 308, 312, 607, 885
BcgI CGANNNNNNTGC 2 cut(s) 1081, 1115
BciT130I CCWGG 3 cut(s) 455, 784, 1110
BcnI CCSGG 1 cut(s) 23
BcoDI GTCTC 2 cut(s) 331, 1153
BfaI CTAG 3 cut(s) 116, 1166, 1402
BfmI CTRYAG 1 cut(s) 879
BfoI RGCGCY 1 cut(s) 506
BisI GCNGC 9 cut(s) 467, 498, 501, 506, 737, 806, 813, 816, 831
BlpI GCTNAGC 1 cut(s) 434
BlsI GCNGC 9 cut(s) 468, 499, 502, 507, 738, 807, 814, 817, 832
Bme1390I CCNGG 4 cut(s) 23, 455, 784, 1110
Bme18I GGWCC 1 cut(s) 1162
BmeRI GACNNNNNGTC 1 cut(s) 490
BmeT110I CYCGRG 1 cut(s) 347
BmgBI CACGTC 2 cut(s) 409, 474
BmgT120I GGNCC 4 cut(s) 450, 451, 1162, 1247
BmiI GGNNCC 4 cut(s) 64, 100, 403, 452
BmrFI CCNGG 4 cut(s) 23, 455, 784, 1110
BmrI ACTGGG 1 cut(s) 439
BmsI GCATC 2 cut(s) 1004, 1024
BmuI ACTGGG 1 cut(s) 439
BpmI CTGGAG 1 cut(s) 293
Bpu1102I GCTNAGC 1 cut(s) 434
BpuEI CTTGAG 1 cut(s) 608
BpuMI CCSGG 1 cut(s) 23
Bsa29I ATCGAT 1 cut(s) 1173
BsaAI YACGTR 3 cut(s) 372, 426, 1277
BsaHI GRCGYC 2 cut(s) 699, 1269
BsaJI CCNNGG 5 cut(s) 453, 710, 783, 1108, 1237
BsaXI ACNNNNNCTCC 2 cut(s) 221, 251
Bsc4I CCNNNNNNNGG 5 cut(s) 22, 59, 295, 398, 493
Bse118I RCCGGY 2 cut(s) 101, 398
Bse1I ACTGG 2 cut(s) 445, 1182
Bse3DI GCAATG 1 cut(s) 42
BseBI CCWGG 3 cut(s) 455, 784, 1110
BseCI ATCGAT 1 cut(s) 1173
BseDI CCNNGG 5 cut(s) 453, 710, 783, 1108, 1237
BseGI GGATG 1 cut(s) 144
BseLI CCNNNNNNNGG 5 cut(s) 22, 59, 295, 398, 493
BseMI GCAATG 1 cut(s) 42
BseMII CTCAG 2 cut(s) 448, 1074
BseNI ACTGG 2 cut(s) 445, 1182
BseRI GAGGAG 3 cut(s) 113, 116, 552
BseSI GKGCMC 2 cut(s) 454, 1194
BseX3I CGGCCG 1 cut(s) 396
BseXI GCAGC 5 cut(s) 453, 492, 792, 802, 824
BsgI GTGCAG 1 cut(s) 452
Bsh1236I CGCG 5 cut(s) 378, 489, 491, 634, 833
Bsh1285I CGRYCG 2 cut(s) 399, 487
BshFI GGCC 4 cut(s) 299, 398, 452, 1248
BshNI GGYRCC 2 cut(s) 98, 401
BshVI ATCGAT 1 cut(s) 1173
BsiEI CGRYCG 2 cut(s) 399, 487
BsiHKAI GWGCWC 4 cut(s) 354, 360, 462, 1194
BsiHKCI CYCGRG 1 cut(s) 347
BsiSI CCGG 4 cut(s) 23, 102, 399, 463
BslFI GGGAC 2 cut(s) 427, 556
BslI CCNNNNNNNGG 5 cut(s) 22, 59, 295, 398, 493
BsmAI GTCTC 2 cut(s) 331, 1153
BsmBI CGTCTC 1 cut(s) 331
BsmFI GGGAC 2 cut(s) 427, 556
BsmI GAATGC 2 cut(s) 303, 1321
BsnI GGCC 4 cut(s) 299, 398, 452, 1248
BsoBI CYCGRG 1 cut(s) 347
Bsp120I GGGCCC 1 cut(s) 450
Bsp1286I GDGCHC 5 cut(s) 354, 360, 454, 462, 1194
Bsp1720I GCTNAGC 1 cut(s) 434
Bsp19I CCATGG 1 cut(s) 1237
BspACI CCGC 8 cut(s) 222, 321, 487, 497, 500, 736, 801, 831
BspANI GGCC 4 cut(s) 299, 398, 452, 1248
BspCNI CTCAG 2 cut(s) 447, 1073
BspDI ATCGAT 1 cut(s) 1173
BspFNI CGCG 5 cut(s) 378, 489, 491, 634, 833
BspHI TCATGA 1 cut(s) 960
BspLI GGNNCC 4 cut(s) 64, 100, 403, 452
BspPI GGATC 7 cut(s) 195, 212, 380, 592, 600, 908, 1359
BspQI GCTCTTC 1 cut(s) 1355
BspT107I GGYRCC 2 cut(s) 98, 401
BsrDI GCAATG 1 cut(s) 42
BsrFI RCCGGY 2 cut(s) 101, 398
BsrI ACTGG 2 cut(s) 445, 1182
BssAI RCCGGY 2 cut(s) 101, 398
BssECI CCNNGG 5 cut(s) 453, 710, 783, 1108, 1237
BssNI GRCGYC 2 cut(s) 699, 1269
BssSI CACGAG 1 cut(s) 353
BssT1I CCWWGG 1 cut(s) 1237
Bst2BI CACGAG 1 cut(s) 353
Bst2UI CCWGG 3 cut(s) 455, 784, 1110
Bst4CI ACNGT 2 cut(s) 112, 996
Bst6I CTCTTC 1 cut(s) 1355
BstACI GRCGYC 2 cut(s) 699, 1269
BstBAI YACGTR 3 cut(s) 372, 426, 1277
BstC8I GCNNGC 8 cut(s) 301, 400, 421, 481, 803, 810, 837, 1005
BstDEI CTNAG 3 cut(s) 434, 843, 1060
BstDSI CCRYGG 1 cut(s) 1237
BstF5I GGATG 1 cut(s) 144
BstFNI CGCG 5 cut(s) 378, 489, 491, 634, 833
BstH2I RGCGCY 1 cut(s) 506
BstHHI GCGC 6 cut(s) 378, 491, 505, 634, 835, 1229
BstMAI GTCTC 2 cut(s) 331, 1153
BstMCI CGRYCG 2 cut(s) 399, 487
BstMWI GCNNNNNNNGC 5 cut(s) 466, 497, 514, 836, 1198
BstNI CCWGG 3 cut(s) 455, 784, 1110
BstNSI RCATGY 5 cut(s) 483, 649, 839, 1069, 1302
BstSCI CCNGG 4 cut(s) 21, 453, 782, 1108
BstSFI CTRYAG 1 cut(s) 879
BstSLI GKGCMC 2 cut(s) 454, 1194
BstUI CGCG 5 cut(s) 378, 489, 491, 634, 833
BstV1I GCAGC 5 cut(s) 453, 492, 792, 802, 824
BstX2I RGATCY 1 cut(s) 592
BstXI CCANNNNNNTGG 2 cut(s) 1202, 1244
BstYI RGATCY 1 cut(s) 592
BstZI CGGCCG 1 cut(s) 396
Bsu15I ATCGAT 1 cut(s) 1173
BsuRI GGCC 4 cut(s) 299, 398, 452, 1248
BsuTUI ATCGAT 1 cut(s) 1173
BtgI CCRYGG 1 cut(s) 1237
BtrI CACGTC 2 cut(s) 409, 474
BtsCI GGATG 1 cut(s) 144
BtsIMutI CAGTG 4 cut(s) 452, 753, 992, 1189
Cac8I GCNNGC 8 cut(s) 301, 400, 421, 481, 803, 810, 837, 1005
CaiI CAGNNNCTG 1 cut(s) 818
CciI TCATGA 1 cut(s) 960
CfoI GCGC 6 cut(s) 378, 491, 505, 634, 835, 1229
Cfr10I RCCGGY 2 cut(s) 101, 398
Cfr13I GGNCC 4 cut(s) 450, 451, 1162, 1247
ClaI ATCGAT 1 cut(s) 1173
CseI GACGC 2 cut(s) 480, 1277
Csp6I GTAC 3 cut(s) 70, 427, 655
CviAII CATG 9 cut(s) 480, 646, 836, 961, 971, 1066, 1087, 1238, 1299
CviQI GTAC 3 cut(s) 70, 427, 655
DdeI CTNAG 3 cut(s) 434, 843, 1060
DraIII CACNNNGTG 1 cut(s) 996
DrdI GACNNNNNNGTC 1 cut(s) 1123
DriI GACNNNNNGTC 1 cut(s) 490
DseDI GACNNNNNNGTC 1 cut(s) 1123
EaeI YGGCCR 2 cut(s) 297, 396
EagI CGGCCG 1 cut(s) 396
Eam1104I CTCTTC 1 cut(s) 1355
Eam1105I GACNNNNNGTC 1 cut(s) 490
EarI CTCTTC 1 cut(s) 1355
EciI GGCGGA 1 cut(s) 310
Ecl136II GAGCTC 1 cut(s) 358
EclXI CGGCCG 1 cut(s) 396
Eco130I CCWWGG 1 cut(s) 1237
Eco24I GRGCYC 2 cut(s) 360, 454
Eco47I GGWCC 1 cut(s) 1162
Eco52I CGGCCG 1 cut(s) 396
Eco53kI GAGCTC 1 cut(s) 358
Eco57I CTGAAG 2 cut(s) 530, 1215
Eco72I CACGTG 1 cut(s) 372
Eco88I CYCGRG 1 cut(s) 347
EcoICRI GAGCTC 1 cut(s) 358
EcoO109I RGGNCCY 2 cut(s) 451, 1162
EcoRI GAATTC 3 cut(s) 664, 964, 1042
EcoRII CCWGG 3 cut(s) 453, 782, 1108
EcoT14I CCWWGG 1 cut(s) 1237
EcoT38I GRGCYC 2 cut(s) 360, 454
ErhI CCWWGG 1 cut(s) 1237
Esp3I CGTCTC 1 cut(s) 331
FaeI CATG 9 cut(s) 483, 649, 839, 964, 974, 1069, 1090, 1241, 1302
FaqI GGGAC 2 cut(s) 427, 556
FatI CATG 9 cut(s) 479, 645, 835, 960, 970, 1065, 1086, 1237, 1298
FauI CCCGC 2 cut(s) 229, 794
FauNDI CATATG 1 cut(s) 1356
Fnu4HI GCNGC 9 cut(s) 467, 498, 501, 506, 737, 806, 813, 816, 831
FokI GGATG 1 cut(s) 131
FriOI GRGCYC 2 cut(s) 360, 454
Fsp4HI GCNGC 9 cut(s) 467, 498, 501, 506, 737, 806, 813, 816, 831
FspBI CTAG 3 cut(s) 116, 1166, 1402
GlaI GCGC 6 cut(s) 377, 490, 504, 633, 834, 1228
GluI GCNGC 9 cut(s) 467, 498, 501, 506, 737, 806, 813, 816, 831
GsuI CTGGAG 1 cut(s) 293
HaeII RGCGCY 1 cut(s) 506
HaeIII GGCC 4 cut(s) 299, 398, 452, 1248
HapII CCGG 4 cut(s) 23, 102, 399, 463
HgaI GACGC 2 cut(s) 480, 1277
HhaI GCGC 6 cut(s) 378, 491, 505, 634, 835, 1229
Hin1I GRCGYC 2 cut(s) 699, 1269
Hin1II CATG 9 cut(s) 483, 649, 839, 964, 974, 1069, 1090, 1241, 1302
Hin6I GCGC 6 cut(s) 376, 489, 503, 632, 833, 1227
HinP1I GCGC 6 cut(s) 376, 489, 503, 632, 833, 1227
HincII GTYRAC 1 cut(s) 1390
HindII GTYRAC 1 cut(s) 1390
HindIII AAGCTT 1 cut(s) 761
HinfI GANTC 5 cut(s) 26, 256, 440, 1117, 1178
HpaII CCGG 4 cut(s) 23, 102, 399, 463
HphI GGTGA 1 cut(s) 739
Hpy166II GTNNAC 5 cut(s) 429, 643, 905, 1192, 1390
Hpy188I TCNGA 5 cut(s) 7, 200, 597, 1063, 1072
Hpy188III TCNNGA 5 cut(s) 310, 854, 893, 911, 961
Hpy8I GTNNAC 5 cut(s) 429, 643, 905, 1192, 1390
Hpy99I CGWCG 8 cut(s) 59, 98, 397, 410, 496, 1129, 1132, 1315
HpyAV CCTTC 5 cut(s) 250, 505, 604, 860, 1260
HpyCH4III ACNGT 2 cut(s) 112, 996
HpyCH4IV ACGT 6 cut(s) 371, 408, 425, 473, 699, 1276
HpyF10VI GCNNNNNNNGC 5 cut(s) 466, 497, 514, 836, 1198
HpyF3I CTNAG 3 cut(s) 434, 843, 1060
HpySE526I ACGT 6 cut(s) 371, 408, 425, 473, 699, 1276
Hsp92I GRCGYC 2 cut(s) 699, 1269
Hsp92II CATG 9 cut(s) 483, 649, 839, 964, 974, 1069, 1090, 1241, 1302
HspAI GCGC 6 cut(s) 376, 489, 503, 632, 833, 1227
KroI GCCGGC 1 cut(s) 398
KroNI GCCGGC 1 cut(s) 400
LguI GCTCTTC 1 cut(s) 1355
LmnI GCTCC 4 cut(s) 180, 465, 514, 1000
Lsp1109I GCAGC 5 cut(s) 453, 492, 792, 802, 824
LweI GCATC 2 cut(s) 1004, 1024
MaeI CTAG 3 cut(s) 116, 1166, 1402
MaeII ACGT 6 cut(s) 371, 408, 425, 473, 699, 1276
MaeIII GTNAC 1 cut(s) 883
MboII GAAGA 1 cut(s) 1372
MflI RGATCY 1 cut(s) 592
MhlI GDGCHC 5 cut(s) 354, 360, 454, 462, 1194
MluCI AATT 8 cut(s) 181, 212, 554, 664, 703, 964, 1042, 1291
MlyI GAGTC 3 cut(s) 250, 449, 1111
MmeI TCCRAC 1 cut(s) 1188
MroNI GCCGGC 1 cut(s) 398
MroXI GAANNNNTTC 1 cut(s) 668
MseI TTAA 2 cut(s) 557, 741
MslI CAYNNNNRTG 1 cut(s) 407
MspA1I CMGCKG 2 cut(s) 75, 815
MspI CCGG 4 cut(s) 23, 102, 399, 463
MspR9I CCNGG 4 cut(s) 23, 455, 784, 1110
Mva1269I GAATGC 2 cut(s) 303, 1321
MvaI CCWGG 3 cut(s) 455, 784, 1110
MvnI CGCG 5 cut(s) 378, 489, 491, 634, 833
MwoI GCNNNNNNNGC 5 cut(s) 466, 497, 514, 836, 1198
NaeI GCCGGC 1 cut(s) 400
NciI CCSGG 1 cut(s) 23
NcoI CCATGG 1 cut(s) 1237
NdeI CATATG 1 cut(s) 1356
NgoMIV GCCGGC 1 cut(s) 398
NlaIII CATG 9 cut(s) 483, 649, 839, 964, 974, 1069, 1090, 1241, 1302
NlaIV GGNNCC 4 cut(s) 64, 100, 403, 452
NmeAIII GCCGAG 1 cut(s) 735
NspI RCATGY 5 cut(s) 483, 649, 839, 1069, 1302
OliI CACNNNNGTG 1 cut(s) 407
PaeI GCATGC 2 cut(s) 483, 839
PaeR7I CTCGAG 1 cut(s) 347
PagI TCATGA 1 cut(s) 960
PciI ACATGT 1 cut(s) 1065
PciSI GCTCTTC 1 cut(s) 1355
PcsI WCGNNNNNNNCGW 1 cut(s) 63
PctI GAATGC 2 cut(s) 303, 1321
PdiI GCCGGC 1 cut(s) 400
PdmI GAANNNNTTC 1 cut(s) 668
PfeI GAWTC 2 cut(s) 26, 1178
PkrI GCNGC 9 cut(s) 468, 499, 502, 507, 738, 807, 814, 817, 832
PleI GAGTC 3 cut(s) 250, 448, 1111
PmaCI CACGTG 1 cut(s) 372
PmlI CACGTG 1 cut(s) 372
PpsI GAGTC 3 cut(s) 250, 448, 1111
Ppu21I YACGTR 3 cut(s) 372, 426, 1277
PpuMI RGGWCCY 1 cut(s) 1162
PscI ACATGT 1 cut(s) 1065
Psp124BI GAGCTC 1 cut(s) 360
Psp5II RGGWCCY 1 cut(s) 1162
Psp6I CCWGG 3 cut(s) 453, 782, 1108
PspCI CACGTG 1 cut(s) 372
PspGI CCWGG 3 cut(s) 453, 782, 1108
PspN4I GGNNCC 4 cut(s) 64, 100, 403, 452
PspOMI GGGCCC 1 cut(s) 450
PspPI GGNCC 4 cut(s) 450, 451, 1162, 1247
PspPPI RGGWCCY 1 cut(s) 1162
PspXI VCTCGAGB 1 cut(s) 347
PstNI CAGNNNCTG 1 cut(s) 818
PsuI RGATCY 1 cut(s) 592
PvuII CAGCTG 2 cut(s) 75, 815
RsaI GTAC 3 cut(s) 71, 428, 656
RsaNI GTAC 3 cut(s) 70, 427, 655
RseI CAYNNNNRTG 1 cut(s) 407
SacI GAGCTC 1 cut(s) 360
SapI GCTCTTC 1 cut(s) 1355
SaqAI TTAA 2 cut(s) 557, 741
SatI GCNGC 9 cut(s) 467, 498, 501, 506, 737, 806, 813, 816, 831
Sau96I GGNCC 4 cut(s) 450, 451, 1162, 1247
SchI GAGTC 3 cut(s) 250, 449, 1111
ScrFI CCNGG 4 cut(s) 23, 455, 784, 1110
SduI GDGCHC 5 cut(s) 354, 360, 454, 462, 1194
SfaNI GCATC 2 cut(s) 1004, 1024
SfcI CTRYAG 1 cut(s) 879
Sfr274I CTCGAG 1 cut(s) 347
SinI GGWCC 1 cut(s) 1162
SlaI CTCGAG 1 cut(s) 347
SmiMI CAYNNNNRTG 1 cut(s) 407
SmlI CTYRAG 2 cut(s) 347, 587
SmoI CTYRAG 2 cut(s) 347, 587
SphI GCATGC 2 cut(s) 483, 839
Sse9I AATT 8 cut(s) 181, 212, 554, 664, 703, 964, 1042, 1291
SsiI CCGC 8 cut(s) 222, 321, 487, 497, 500, 736, 801, 831
SspMI CTAG 3 cut(s) 116, 1166, 1402
SstI GAGCTC 1 cut(s) 360
StyD4I CCNGG 4 cut(s) 21, 453, 782, 1108
StyI CCWWGG 1 cut(s) 1237
TaaI ACNGT 2 cut(s) 112, 996
TaiI ACGT 6 cut(s) 374, 411, 428, 476, 702, 1279
TaqI TCGA 6 cut(s) 216, 282, 348, 1101, 1130, 1173
TasI AATT 8 cut(s) 181, 212, 554, 664, 703, 964, 1042, 1291
TatI WGTACW 1 cut(s) 69
TauI GCSGC 4 cut(s) 500, 503, 739, 833
TfiI GAWTC 2 cut(s) 26, 1178
Tru1I TTAA 2 cut(s) 557, 741
Tru9I TTAA 2 cut(s) 557, 741
TscAI CASTG 4 cut(s) 452, 760, 999, 1189
TseI GCWGC 5 cut(s) 466, 505, 805, 812, 815
TspDTI ATGAA 2 cut(s) 977, 1373
TspGWI ACGGA 3 cut(s) 381, 996, 1299
TspRI CASTG 4 cut(s) 452, 760, 999, 1189
VneI GTGCAC 1 cut(s) 1190
VpaK11BI GGWCC 1 cut(s) 1162
XapI RAATTY 4 cut(s) 181, 664, 964, 1042
XceI RCATGY 5 cut(s) 483, 649, 839, 1069, 1302
XhoI CTCGAG 1 cut(s) 347
XmnI GAANNNNTTC 1 cut(s) 668
XspI CTAG 3 cut(s) 116, 1166, 1402
ZraI GACGTC 1 cut(s) 700
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.