Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0010395

Physical Location & Seq

Genomic Coordinates Reverse (-)

13737548 .. 13741502

Gene Structure 3955 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G109300.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 822 bp

ATGGCTCTTAGAATTTGCTTCTTGTTCCTTGTGATAACTTTGCTGCTTGCAACTAGCACTTCAACTTCTGTCCAAAACGACCTGAGTTCAGTTTCATTTAGTTACTCTGGCGCAACTGGCCCAGAAAAATGGGGAAGCTTGAGCCCATTTTTCTCGGCATGCTCCAATGGGAAGATACAATCTCCTGTGGACATCGTGAAGGGCATACTTTCCCCTAGCAAGAGATTAAAGCCATTAACCAGAGTCTACGGTGCTTCAAATGCCACTTTGTTTAACAACGGCTTTAACATTGGGGTGCATTTCGAAGGACATGTGGGGACATTGGATGTGGATGGTAAGAACTATGACTTGAAGCAGATGCACTGGCACTCTCCCTCTGAGCACCGCCTTAATGGAGTCCAATTTCCAGCTGAGCTTCATCTACTTCACCAGGCATCTGACCAGAGCATGTCCGTTGTGGCAGTTCTCTTCCAATTCGGCAAGGATGATATAATCATCTCTAAGATTAAGGACAAGCTGACTGAGCTGGCCAAGGAGACGTGTAAAAAGGAAGAAGATGCTCAAATTCCCCTTGGAACCGTAGATCTCAACGAGTTCCAGAAGAAGAGCCGCAAATATTTCAGATATGTTGGTTCTCTCACCGTTCCTCCATGCACCGAGAATGTCGTATGGAACATTCTTGGAAAGGTAAGGACCATTTCCAAGGATCAGTTAAATGCTCTAAAAGCACCATTGGATTCAGCTTGCAAGAACAACTCAAGACCACTGCAGCCTCCTAATGGACGCAAAGTCGAGTTCTACGATGAGCTTAGGGACCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004089 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0016829 GO:0016835 GO:0016836 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00910 map00910

Pfam Domains

Protein Families

Carb_anhydrase

Protein Analysis

274

Amino Acids

30.33

Weight (kDa)

8.86

Isoelectric Point (pI)

43.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010395)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G52720 AT3G52720 AT3G52720 AT3G52720
fragaria_vesca	FvH4_6g18830 FvH4_6g18830
malus_domestica	MD12G1024600.v1.1
prunus_persica	Prupe.7G109300_v2.0.a1 Prupe.7G109300_v2.0.a1
pyrus_communis	pycom12g02430
rosa_chinensis	RchiOBHm_Chr3g0473841
rosa_laevigata	RLG00000023979
rosa_multiflora	Rmu_sc0005561.1_g000003
rosa_roxburghii	Rroxscaffold_6G00407730
rosa_rugosa	Rorug03G0135900 Rorug03G0136000
rosa_samantha	Rh3AG186400 Rh3BG215000 Rh3CG211700 Rh3DG210800
rosa_wichuraiana	Rw3G017050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	246
AciI	CCGC	2 cut(s)	385, 610
AclWI	GGATC	1 cut(s)	714
AcoI	YGGCCR	1 cut(s)	528
AcsI	RAATTY	2 cut(s)	12, 564
AfiI	CCNNNNNNNGG	1 cut(s)	779
AflIII	ACRYGT	2 cut(s)	310, 539
AgsI	TTSAA	3 cut(s)	63, 258, 352
AhdI	GACNNNNNGTC	1 cut(s)	788
AjiI	CACGTC	1 cut(s)	540
AjnI	CCWGG	1 cut(s)	429
AluBI	AGCT	7 cut(s)	138, 410, 415, 517, 526, 743, 808
AluI	AGCT	7 cut(s)	138, 410, 415, 517, 526, 743, 808
Alw21I	GWGCWC	1 cut(s)	384
Alw26I	GTCTC	1 cut(s)	530
AlwI	GGATC	1 cut(s)	714
AoxI	GGCC	2 cut(s)	118, 528
ApeKI	GCWGC	2 cut(s)	43, 769
ApoI	RAATTY	2 cut(s)	12, 564
AspLEI	GCGC	1 cut(s)	113
AspS9I	GGNCC	3 cut(s)	119, 693, 814
AsuHPI	GGTGA	2 cut(s)	419, 631
AsuII	TTCGAA	1 cut(s)	303
AvaII	GGWCC	2 cut(s)	693, 814
BalI	TGGCCA	1 cut(s)	530
BanII	GRGCYC	1 cut(s)	146
Bbv12I	GWGCWC	1 cut(s)	384
BbvI	GCAGC	2 cut(s)	30, 781
BccI	CCATC	1 cut(s)	326
BceAI	ACGGC	1 cut(s)	295
BciT130I	CCWGG	1 cut(s)	431
BcoDI	GTCTC	1 cut(s)	530
BfaI	CTAG	2 cut(s)	54, 216
BfmI	CTRYAG	1 cut(s)	767
BglII	AGATCT	1 cut(s)	583
BisI	GCNGC	3 cut(s)	44, 610, 770
BlpI	GCTNAGC	1 cut(s)	411
BlsI	GCNGC	3 cut(s)	45, 611, 771
Bme1390I	CCNGG	1 cut(s)	431
Bme18I	GGWCC	2 cut(s)	693, 814
BmeRI	GACNNNNNGTC	1 cut(s)	788
BmgBI	CACGTC	1 cut(s)	540
BmgT120I	GGNCC	3 cut(s)	119, 693, 814
BmiI	GGNNCC	2 cut(s)	577, 815
BmrFI	CCNGG	1 cut(s)	431
BmsI	GCATC	3 cut(s)	348, 443, 547
Bpu10I	CCTNAGC	1 cut(s)	809
Bpu1102I	GCTNAGC	1 cut(s)	411
Bpu14I	TTCGAA	1 cut(s)	303
BpuEI	CTTGAG	2 cut(s)	160, 742
BsaJI	CCNNGG	3 cut(s)	531, 571, 702
BsaXI	ACNNNNNCTCC	2 cut(s)	631, 661
Bsc4I	CCNNNNNNNGG	1 cut(s)	779
Bse1I	ACTGG	3 cut(s)	121, 368, 817
BseBI	CCWGG	1 cut(s)	431
BseDI	CCNNGG	3 cut(s)	531, 571, 702
BseGI	GGATG	3 cut(s)	331, 337, 490
BseLI	CCNNNNNNNGG	1 cut(s)	779
BseMII	CTCAG	4 cut(s)	74, 369, 402, 513
BseNI	ACTGG	3 cut(s)	121, 368, 817
BseXI	GCAGC	2 cut(s)	30, 781
BshFI	GGCC	2 cut(s)	120, 530
BsiHKAI	GWGCWC	1 cut(s)	384
BslFI	GGGAC	1 cut(s)	331
BslI	CCNNNNNNNGG	1 cut(s)	779
BsmAI	GTCTC	1 cut(s)	530
BsmBI	CGTCTC	1 cut(s)	530
BsmFI	GGGAC	1 cut(s)	331
BsnI	GGCC	2 cut(s)	120, 530
Bsp119I	TTCGAA	1 cut(s)	303
Bsp1286I	GDGCHC	2 cut(s)	146, 384
Bsp143I	GATC	2 cut(s)	583, 706
Bsp1720I	GCTNAGC	1 cut(s)	411
BspACI	CCGC	2 cut(s)	385, 610
BspANI	GGCC	2 cut(s)	120, 530
BspCNI	CTCAG	4 cut(s)	75, 370, 403, 514
BspLI	GGNNCC	2 cut(s)	577, 815
BspMAI	CTGCAG	1 cut(s)	771
BspPI	GGATC	1 cut(s)	714
BspQI	GCTCTTC	1 cut(s)	599
BspT104I	TTCGAA	1 cut(s)	303
BsrI	ACTGG	3 cut(s)	121, 368, 817
BssECI	CCNNGG	3 cut(s)	531, 571, 702
BssMI	GATC	2 cut(s)	583, 706
BssT1I	CCWWGG	3 cut(s)	531, 571, 702
Bst2UI	CCWGG	1 cut(s)	431
Bst4CI	ACNGT	3 cut(s)	251, 580, 643
Bst6I	CTCTTC	2 cut(s)	473, 599
BstBI	TTCGAA	1 cut(s)	303
BstC8I	GCNNGC	4 cut(s)	48, 160, 528, 745
BstDEI	CTNAG	7 cut(s)	8, 83, 378, 411, 501, 522, 809
BstF5I	GGATG	3 cut(s)	331, 337, 490
BstHHI	GCGC	1 cut(s)	113
BstKTI	GATC	2 cut(s)	586, 709
BstMAI	GTCTC	1 cut(s)	530
BstMBI	GATC	2 cut(s)	583, 706
BstMWI	GCNNNNNNNGC	4 cut(s)	117, 260, 523, 725
BstNI	CCWGG	1 cut(s)	431
BstNSI	RCATGY	3 cut(s)	162, 314, 451
BstSCI	CCNGG	1 cut(s)	429
BstSFI	CTRYAG	1 cut(s)	767
BstV1I	GCAGC	2 cut(s)	30, 781
BstX2I	RGATCY	1 cut(s)	583
BstXI	CCANNNNNNTGG	1 cut(s)	129
BstYI	RGATCY	1 cut(s)	583
BsuRI	GGCC	2 cut(s)	120, 530
BtrI	CACGTC	1 cut(s)	540
BtsCI	GGATG	3 cut(s)	331, 337, 490
BtsI	GCAGTG	1 cut(s)	764
BtsIMutI	CAGTG	2 cut(s)	361, 764
Cac8I	GCNNGC	4 cut(s)	48, 160, 528, 745
CfoI	GCGC	1 cut(s)	113
Cfr13I	GGNCC	3 cut(s)	119, 693, 814
CseI	GACGC	1 cut(s)	792
CviAII	CATG	4 cut(s)	159, 311, 448, 651
DdeI	CTNAG	7 cut(s)	8, 83, 378, 411, 501, 522, 809
DpnI	GATC	2 cut(s)	585, 708
DpnII	GATC	2 cut(s)	583, 706
DriI	GACNNNNNGTC	1 cut(s)	788
EaeI	YGGCCR	1 cut(s)	528
Eam1104I	CTCTTC	2 cut(s)	473, 599
Eam1105I	GACNNNNNGTC	1 cut(s)	788
EarI	CTCTTC	2 cut(s)	473, 599
Eco130I	CCWWGG	3 cut(s)	531, 571, 702
Eco24I	GRGCYC	1 cut(s)	146
Eco47I	GGWCC	2 cut(s)	693, 814
EcoRII	CCWGG	1 cut(s)	429
EcoT14I	CCWWGG	3 cut(s)	531, 571, 702
EcoT38I	GRGCYC	1 cut(s)	146
ErhI	CCWWGG	3 cut(s)	531, 571, 702
Esp3I	CGTCTC	1 cut(s)	530
FaeI	CATG	4 cut(s)	162, 314, 451, 654
FaiI	YATR	9 cut(s)	160, 206, 312, 345, 449, 491, 627, 652, 670
FaqI	GGGAC	1 cut(s)	331
FatI	CATG	4 cut(s)	158, 310, 447, 650
FblI	GTMKAC	1 cut(s)	246
Fnu4HI	GCNGC	3 cut(s)	44, 610, 770
FokI	GGATG	3 cut(s)	338, 344, 497
FriOI	GRGCYC	1 cut(s)	146
Fsp4HI	GCNGC	3 cut(s)	44, 610, 770
FspBI	CTAG	2 cut(s)	54, 216
GlaI	GCGC	1 cut(s)	112
GluI	GCNGC	3 cut(s)	44, 610, 770
HaeIII	GGCC	2 cut(s)	120, 530
HgaI	GACGC	1 cut(s)	792
HhaI	GCGC	1 cut(s)	113
Hin1II	CATG	4 cut(s)	162, 314, 451, 654
Hin6I	GCGC	1 cut(s)	111
HinP1I	GCGC	1 cut(s)	111
HindIII	AAGCTT	1 cut(s)	136
HinfI	GANTC	3 cut(s)	243, 396, 737
HphI	GGTGA	2 cut(s)	419, 631
Hpy166II	GTNNAC	2 cut(s)	190, 247
Hpy188I	TCNGA	3 cut(s)	379, 439, 623
Hpy188III	TCNNGA	3 cut(s)	196, 598, 759
Hpy8I	GTNNAC	2 cut(s)	190, 247
HpyAV	CCTTC	2 cut(s)	193, 299
HpyCH4III	ACNGT	3 cut(s)	251, 580, 643
HpyCH4IV	ACGT	1 cut(s)	539
HpyCH4V	TGCA	6 cut(s)	50, 298, 361, 654, 747, 769
HpyF10VI	GCNNNNNNNGC	4 cut(s)	117, 260, 523, 725
HpyF3I	CTNAG	7 cut(s)	8, 83, 378, 411, 501, 522, 809
HpySE526I	ACGT	1 cut(s)	539
Hsp92II	CATG	4 cut(s)	162, 314, 451, 654
HspAI	GCGC	1 cut(s)	111
Kzo9I	GATC	2 cut(s)	583, 706
LguI	GCTCTTC	1 cut(s)	599
LmnI	GCTCC	1 cut(s)	167
Lsp1109I	GCAGC	2 cut(s)	30, 781
LweI	GCATC	3 cut(s)	348, 443, 547
MaeI	CTAG	2 cut(s)	54, 216
MaeII	ACGT	1 cut(s)	539
MaeIII	GTNAC	1 cut(s)	101
MalI	GATC	2 cut(s)	585, 708
MboI	GATC	2 cut(s)	583, 706
MboII	GAAGA	6 cut(s)	184, 460, 563, 566, 613, 616
MflI	RGATCY	1 cut(s)	583
MhlI	GDGCHC	2 cut(s)	146, 384
MlsI	TGGCCA	1 cut(s)	530
MluCI	AATT	4 cut(s)	12, 401, 473, 564
MluNI	TGGCCA	1 cut(s)	530
MlyI	GAGTC	2 cut(s)	252, 405
MnlI	CCTC	3 cut(s)	385, 657, 783
Mox20I	TGGCCA	1 cut(s)	530
MscI	TGGCCA	1 cut(s)	530
MseI	TTAA	7 cut(s)	227, 236, 273, 285, 390, 507, 713
MslI	CAYNNNNRTG	1 cut(s)	293
Msp20I	TGGCCA	1 cut(s)	530
MspA1I	CMGCKG	1 cut(s)	410
MspR9I	CCNGG	1 cut(s)	431
MvaI	CCWGG	1 cut(s)	431
MwoI	GCNNNNNNNGC	4 cut(s)	117, 260, 523, 725
NdeII	GATC	2 cut(s)	583, 706
NlaIII	CATG	4 cut(s)	162, 314, 451, 654
NlaIV	GGNNCC	2 cut(s)	577, 815
NmeAIII	GCCGAG	1 cut(s)	134
NspI	RCATGY	3 cut(s)	162, 314, 451
NspV	TTCGAA	1 cut(s)	303
PaeI	GCATGC	1 cut(s)	162
PciI	ACATGT	1 cut(s)	310
PciSI	GCTCTTC	1 cut(s)	599
PcsI	WCGNNNNNNNCGW	1 cut(s)	798
PfeI	GAWTC	1 cut(s)	737
PkrI	GCNGC	3 cut(s)	45, 611, 771
PleI	GAGTC	2 cut(s)	251, 404
PpsI	GAGTC	2 cut(s)	251, 404
PscI	ACATGT	1 cut(s)	310
Psp6I	CCWGG	1 cut(s)	429
PspGI	CCWGG	1 cut(s)	429
PspN4I	GGNNCC	2 cut(s)	577, 815
PspPI	GGNCC	3 cut(s)	119, 693, 814
PstI	CTGCAG	1 cut(s)	771
PsuI	RGATCY	1 cut(s)	583
PvuII	CAGCTG	1 cut(s)	410
RseI	CAYNNNNRTG	1 cut(s)	293
SapI	GCTCTTC	1 cut(s)	599
SaqAI	TTAA	7 cut(s)	227, 236, 273, 285, 390, 507, 713
SatI	GCNGC	3 cut(s)	44, 610, 770
Sau3AI	GATC	2 cut(s)	583, 706
Sau96I	GGNCC	3 cut(s)	119, 693, 814
SchI	GAGTC	2 cut(s)	252, 405
ScrFI	CCNGG	1 cut(s)	431
SduI	GDGCHC	2 cut(s)	146, 384
SfaNI	GCATC	3 cut(s)	348, 443, 547
SfcI	CTRYAG	1 cut(s)	767
SfuI	TTCGAA	1 cut(s)	303
SinI	GGWCC	2 cut(s)	693, 814
SmiMI	CAYNNNNRTG	1 cut(s)	293
SmlI	CTYRAG	2 cut(s)	139, 757
SmoI	CTYRAG	2 cut(s)	139, 757
SphI	GCATGC	1 cut(s)	162
Sse9I	AATT	4 cut(s)	12, 401, 473, 564
SsiI	CCGC	2 cut(s)	385, 610
SspI	AATATT	1 cut(s)	617
SspMI	CTAG	2 cut(s)	54, 216
StyD4I	CCNGG	1 cut(s)	429
StyI	CCWWGG	3 cut(s)	531, 571, 702
TaaI	ACNGT	3 cut(s)	251, 580, 643
TaiI	ACGT	1 cut(s)	542
TaqI	TCGA	2 cut(s)	303, 792
TasI	AATT	4 cut(s)	12, 401, 473, 564
TauI	GCSGC	1 cut(s)	612
TfiI	GAWTC	1 cut(s)	737
Tru1I	TTAA	7 cut(s)	227, 236, 273, 285, 390, 507, 713
Tru9I	TTAA	7 cut(s)	227, 236, 273, 285, 390, 507, 713
TscAI	CASTG	2 cut(s)	368, 771
TseI	GCWGC	2 cut(s)	43, 769
TspDTI	ATGAA	2 cut(s)	84, 407
TspGWI	ACGGA	1 cut(s)	442
TspRI	CASTG	2 cut(s)	368, 771
VpaK11BI	GGWCC	2 cut(s)	693, 814
XapI	RAATTY	2 cut(s)	12, 564
XceI	RCATGY	3 cut(s)	162, 314, 451
XmiI	GTMKAC	1 cut(s)	246
XspI	CTAG	2 cut(s)	54, 216

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.