Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0015511

Physical Location & Seq

Genomic Coordinates Reverse (-)

14841075 .. 14842766

Gene Structure 1692 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G127500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 399 bp

ATGGCTCGGAGTATCTCCTACGTAACAGGCGCTCAGCTAGTCTCTCTCAAACGCCGCCCAAACATCGCCATCATAGATGTCAGGGATGACGAAAGGAGTTACGATGGGCACATAGCAGGGTCTTTGCACTACGCCAGTGGCAATTTCTATGAGAAGATCTCCAATCTCGTTCAAGATTGCAAAGGCAAAGACACCCTCGTTTTCCACTGCGTTCTTAGCCAGGTCCGTGGCCCATCTTGTGCACGAAAGTTTGCCAATTATCTTGAGGAGGTGAAGGAAGACACTGGAATCAAAGACATTTTGATTTTGGAGCGTGGCTTCAGTGGCTGGGAATCTTCTGGCAGACCTGTTTGTCACTGCACCAGCGTTCCCTGTAAGGGTGAGACTGGGAGTGCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004721 GO:0004725 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006464 GO:0006468 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008794 GO:0009507 GO:0009536 GO:0009987 GO:0016310 GO:0016311 GO:0016491 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0030611 GO:0030613 GO:0030614 GO:0035335 GO:0036211 GO:0042221 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046685 GO:0050896 GO:0055114 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Rhodanese

Protein Analysis

133

Amino Acids

14.53

Weight (kDa)

7.62

Isoelectric Point (pI)

52.55

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0015511)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G03455 AT5G03455
fragaria_vesca	FvH4_6g16580
malus_domestica	MD12G1109000.v1.1
prunus_persica	Prupe.7G127500_v2.0.a1
pyrus_communis	pycom12g10920
rosa_chinensis	RchiOBHm_Chr3g0470511
rosa_laevigata	RLG00000024261
rosa_multiflora	Rmu_sc0003381.1_g000014
rosa_roxburghii	Rroxscaffold_6G00410750
rosa_rugosa	Rorug03G0109800
rosa_samantha	Rh3AG159900 Rh3BG184400 Rh3CG174900 Rh3DG190300
rosa_wichuraiana	Rw3G015130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	351
AciI	CCGC	1 cut(s)	55
AcuI	CTGAAG	1 cut(s)	304
AfiI	CCNNNNNNNGG	1 cut(s)	377
AgsI	TTSAA	1 cut(s)	173
AjnI	CCWGG	1 cut(s)	219
AluBI	AGCT	1 cut(s)	37
AluI	AGCT	1 cut(s)	37
Alw21I	GWGCWC	1 cut(s)	244
Alw26I	GTCTC	2 cut(s)	46, 377
Alw44I	GTGCAC	1 cut(s)	240
AlwNI	CAGNNNCTG	1 cut(s)	327
AoxI	GGCC	1 cut(s)	229
ApaLI	GTGCAC	1 cut(s)	240
AspLEI	GCGC	1 cut(s)	32
AspS9I	GGNCC	2 cut(s)	223, 230
AsuHPI	GGTGA	2 cut(s)	283, 392
AvaII	GGWCC	1 cut(s)	223
BaeGI	GKGCMC	2 cut(s)	111, 244
BbsI	GAAGAC	1 cut(s)	285
Bbv12I	GWGCWC	1 cut(s)	244
BccI	CCATC	3 cut(s)	77, 98, 241
BciT130I	CCWGG	1 cut(s)	221
BcoDI	GTCTC	2 cut(s)	46, 377
BfaI	CTAG	1 cut(s)	38
BfoI	RGCGCY	1 cut(s)	33
BglII	AGATCT	1 cut(s)	156
BisI	GCNGC	1 cut(s)	55
BlpI	GCTNAGC	1 cut(s)	33
BlsI	GCNGC	1 cut(s)	56
Bme1390I	CCNGG	1 cut(s)	221
Bme18I	GGWCC	1 cut(s)	223
BmgT120I	GGNCC	2 cut(s)	223, 230
BmrFI	CCNGG	1 cut(s)	221
BmrI	ACTGGG	1 cut(s)	396
BmuI	ACTGGG	1 cut(s)	396
BpiI	GAAGAC	1 cut(s)	285
BplI	GAGNNNNNCTC	2 cut(s)	143, 175
Bpu1102I	GCTNAGC	1 cut(s)	33
BpuEI	CTTGAG	1 cut(s)	284
BsaAI	YACGTR	1 cut(s)	22
BsaJI	CCNNGG	1 cut(s)	226
Bsc4I	CCNNNNNNNGG	1 cut(s)	377
Bse1I	ACTGG	3 cut(s)	135, 289, 391
BseBI	CCWGG	1 cut(s)	221
BseDI	CCNNGG	1 cut(s)	226
BseGI	GGATG	1 cut(s)	91
BseLI	CCNNNNNNNGG	1 cut(s)	377
BseMII	CTCAG	1 cut(s)	47
BseNI	ACTGG	3 cut(s)	135, 289, 391
BseRI	GAGGAG	1 cut(s)	281
BseSI	GKGCMC	2 cut(s)	111, 244
BseYI	CCCAGC	1 cut(s)	327
BsgI	GTGCAG	1 cut(s)	343
BshFI	GGCC	1 cut(s)	231
BsiHKAI	GWGCWC	1 cut(s)	244
BslI	CCNNNNNNNGG	1 cut(s)	377
BsmAI	GTCTC	2 cut(s)	46, 377
BsnI	GGCC	1 cut(s)	231
Bsp1286I	GDGCHC	2 cut(s)	111, 244
Bsp143I	GATC	1 cut(s)	156
Bsp1720I	GCTNAGC	1 cut(s)	33
BspACI	CCGC	1 cut(s)	55
BspANI	GGCC	1 cut(s)	231
BspCNI	CTCAG	1 cut(s)	46
BsrI	ACTGG	3 cut(s)	135, 289, 391
BssECI	CCNNGG	1 cut(s)	226
BssMI	GATC	1 cut(s)	156
Bst2UI	CCWGG	1 cut(s)	221
BstBAI	YACGTR	1 cut(s)	22
BstDEI	CTNAG	2 cut(s)	33, 215
BstDSI	CCRYGG	1 cut(s)	226
BstF5I	GGATG	1 cut(s)	91
BstH2I	RGCGCY	1 cut(s)	33
BstHHI	GCGC	1 cut(s)	32
BstKTI	GATC	1 cut(s)	159
BstMAI	GTCTC	2 cut(s)	46, 377
BstMBI	GATC	1 cut(s)	156
BstMWI	GCNNNNNNNGC	2 cut(s)	216, 324
BstNI	CCWGG	1 cut(s)	221
BstSCI	CCNGG	1 cut(s)	219
BstSLI	GKGCMC	2 cut(s)	111, 244
BstSNI	TACGTA	1 cut(s)	22
BstV2I	GAAGAC	1 cut(s)	285
BstX2I	RGATCY	1 cut(s)	156
BstXI	CCANNNNNNTGG	1 cut(s)	227
BstYI	RGATCY	1 cut(s)	156
BsuRI	GGCC	1 cut(s)	231
BtgI	CCRYGG	1 cut(s)	226
BtgZI	GCGATG	1 cut(s)	49
BtsCI	GGATG	1 cut(s)	91
BtsI	GCAGTG	2 cut(s)	205, 355
BtsIMutI	CAGTG	5 cut(s)	142, 205, 282, 328, 355
CaiI	CAGNNNCTG	1 cut(s)	327
CfoI	GCGC	1 cut(s)	32
Cfr13I	GGNCC	2 cut(s)	223, 230
CviJI	RGCY	6 cut(s)	5, 37, 219, 231, 318, 327
CviKI_1	RGCY	6 cut(s)	5, 37, 219, 231, 318, 327
DdeI	CTNAG	2 cut(s)	33, 215
DpnI	GATC	1 cut(s)	158
DpnII	GATC	1 cut(s)	156
DrdI	GACNNNNNNGTC	1 cut(s)	351
DseDI	GACNNNNNNGTC	1 cut(s)	351
Eco105I	TACGTA	1 cut(s)	22
Eco47I	GGWCC	1 cut(s)	223
Eco57I	CTGAAG	1 cut(s)	304
EcoRII	CCWGG	1 cut(s)	219
FaiI	YATR	3 cut(s)	74, 113, 150
Fnu4HI	GCNGC	1 cut(s)	55
FokI	GGATG	1 cut(s)	98
Fsp4HI	GCNGC	1 cut(s)	55
FspBI	CTAG	1 cut(s)	38
GlaI	GCGC	1 cut(s)	31
GluI	GCNGC	1 cut(s)	55
GsaI	CCCAGC	1 cut(s)	331
HaeII	RGCGCY	1 cut(s)	33
HaeIII	GGCC	1 cut(s)	231
HhaI	GCGC	1 cut(s)	32
Hin6I	GCGC	1 cut(s)	30
HinP1I	GCGC	1 cut(s)	30
HinfI	GANTC	2 cut(s)	288, 332
HphI	GGTGA	2 cut(s)	283, 392
Hpy166II	GTNNAC	1 cut(s)	242
Hpy188I	TCNGA	1 cut(s)	9
Hpy188III	TCNNGA	2 cut(s)	173, 263
Hpy8I	GTNNAC	1 cut(s)	242
HpyAV	CCTTC	1 cut(s)	268
HpyCH4IV	ACGT	1 cut(s)	21
HpyCH4V	TGCA	4 cut(s)	127, 180, 242, 360
HpyF10VI	GCNNNNNNNGC	2 cut(s)	216, 324
HpyF3I	CTNAG	2 cut(s)	33, 215
HpySE526I	ACGT	1 cut(s)	21
HspAI	GCGC	1 cut(s)	30
Kzo9I	GATC	1 cut(s)	156
LmnI	GCTCC	1 cut(s)	310
MaeI	CTAG	1 cut(s)	38
MaeII	ACGT	1 cut(s)	21
MaeIII	GTNAC	3 cut(s)	22, 98, 353
MalI	GATC	1 cut(s)	158
MboI	GATC	1 cut(s)	156
MboII	GAAGA	3 cut(s)	166, 290, 327
MflI	RGATCY	1 cut(s)	156
MhlI	GDGCHC	2 cut(s)	111, 244
MluCI	AATT	2 cut(s)	142, 256
MnlI	CCTC	3 cut(s)	206, 259, 262
MspR9I	CCNGG	1 cut(s)	221
MvaI	CCWGG	1 cut(s)	221
MwoI	GCNNNNNNNGC	2 cut(s)	216, 324
NdeII	GATC	1 cut(s)	156
NmuCI	GTSAC	1 cut(s)	353
PfeI	GAWTC	2 cut(s)	288, 332
PkrI	GCNGC	1 cut(s)	56
Ppu21I	YACGTR	1 cut(s)	22
Psp6I	CCWGG	1 cut(s)	219
PspFI	CCCAGC	1 cut(s)	327
PspGI	CCWGG	1 cut(s)	219
PspPI	GGNCC	2 cut(s)	223, 230
PstNI	CAGNNNCTG	1 cut(s)	327
PsuI	RGATCY	1 cut(s)	156
SatI	GCNGC	1 cut(s)	55
Sau3AI	GATC	1 cut(s)	156
Sau96I	GGNCC	2 cut(s)	223, 230
ScrFI	CCNGG	1 cut(s)	221
SduI	GDGCHC	2 cut(s)	111, 244
SetI	ASST	5 cut(s)	24, 39, 225, 273, 349
SinI	GGWCC	1 cut(s)	223
SmlI	CTYRAG	1 cut(s)	263
SmoI	CTYRAG	1 cut(s)	263
SnaBI	TACGTA	1 cut(s)	22
Sse9I	AATT	2 cut(s)	142, 256
SsiI	CCGC	1 cut(s)	55
SspMI	CTAG	1 cut(s)	38
StyD4I	CCNGG	1 cut(s)	219
TaiI	ACGT	1 cut(s)	24
TasI	AATT	2 cut(s)	142, 256
TauI	GCSGC	1 cut(s)	57
TfiI	GAWTC	2 cut(s)	288, 332
TscAI	CASTG	5 cut(s)	142, 212, 289, 328, 362
TseFI	GTSAC	1 cut(s)	353
Tsp45I	GTSAC	1 cut(s)	353
TspGWI	ACGGA	1 cut(s)	215
TspRI	CASTG	5 cut(s)	142, 212, 289, 328, 362
VneI	GTGCAC	1 cut(s)	240
VpaK11BI	GGWCC	1 cut(s)	223
XspI	CTAG	1 cut(s)	38

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.