Prupe.7G131000_v2.0.a1

PI-PLC X domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0011277
Physical Location & Seq
Forward (+)
15035727 .. 15040196
4470 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G131000.1

Sequence Viewer

Length: 1275 bp
ATGCTACCGTGCTCCGCAGACCACCGTGGCTTATGCAGGGCCTCATCAGCTGGTTACCTCTCTCTGTTACTCTTCTCAGTCCTGGTCACCATTTCCGCTGCTTGCTCCAATGGCGCTTGCCAGGTTCTAGAAGCTTGTGCAGCAGCCACAGACTGTGGGCCAGGTCTTTACTGTGGCAACTGCCCTGCTTCGGGCAAGAATCAACCCGTCTGTACCAGAGGCCAAGCAATCGCACCCACTTCAATTATTAATGGGTTGCCTTTCAACAAGTACACATGGTTGGTGACTCATAACTCTTTCAGCATCGTTGATGCACCGCCTTTGCCTGGTGTTCAAAGACTGACATTTTACAATCAAGAAGACACAGTTACTAATCAGTTAAGGAATGGAGTGAGGGGACTGATGTTGGATGTGTACGATTTCGAGAATGATATCTGGCTTTGCCATTCTTTTCAGAGGCAATGTTTCAACTTCACTGCATTTCAACCTGCAATTAACACTTTGACGGAAGTGGAAGCATTTTTAAGTCAGAACCCAACAGAGATTGTGACCATTATACTGGAGGACTATGTGAAAGCTCCAAAAGGATTAACAACATTATTTACTAAGGCTGGGTTAGACAAATATTGGTTTCCTGTATCCAAAATGCCGAGGAAGGGTGAAGATTGGCCCACTGTGACTGAGATGGTGCAAGAGAACCACCGGCTTCTTGTTTTCACCTCTGATGGTTCAAAGGAAGCACTAGAAGGAATAGCTTATCAATGGAAGTATATGGTGGAAAACGAATCTGGAGATCCTGGGGTGAAACCAGGCTCATGCCCAAAGAGAAAAGAATCAAAGCCACTTAATTCAAAAAGTGCGTCTCTTTTCTTCCAAAATTATTTCCCAACATATCCAGTTGAAGCTGAAGCTTGCAAGGAGCATTCAACTTCACTTGAGGAGATGGTTGGTACCTGTTACAAAGCAGCAGGGGCGATGCCAAATTTTTTGGCAGTCAACTTTTACATGAGGAGTGATGGAGTAGGTGTGTTTGATGCTGTTGATAGAATGAATGGCCGGACACTTTGTGGGTGTAGTACTGTCAGTGCCTGCCAGGCTGGAGCACCTTTTGGATCTTGCAAGAATGTTTCTATACCAACTAGAAGTCCAGTGACCAATAATGCAGGAAGCTTTACTGGCTCTGTTCAGTTTGCAAAATCTGCGTCAACAGTCTATTCTCCGAATCGCTTGGTTGTCTTTATGTTTTATATTCCATTGATGGCATTTTGGTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0031224 GO:0031225 GO:0031226 GO:0044425 GO:0044459 GO:0044464 GO:0046658 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

425

Amino Acids

46.36

Weight (kDa)

6.53

Isoelectric Point (pI)

38.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011277)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G67130
fragaria_vesca FvH4_1g16250 FvH4_1g16250 FvH4_1g16250
malus_domestica MD02G1174800.v1.1 MD15G1285800.v1.1
prunus_persica Prupe.7G131000_v2.0.a1
pyrus_communis pycom02g14120 pycom15g24890
rosa_chinensis RchiOBHm_Chr2g0105961
rosa_laevigata RLG00000017473
rosa_multiflora Rmu_sc0004367.1_g000025
rosa_roxburghii Rroxscaffold_2G00137520 Rroxscaffold_2G00137670
rosa_rugosa Rorug02G0132600
rosa_samantha Rh2AG182900 Rh2BG193100 Rh2CG187400 Rh2DG189400
rosa_wichuraiana Rw2G014350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 496
Acc65I GGTACC 1 cut(s) 950
AccB1I GGYRCC 1 cut(s) 950
AciI CCGC 3 cut(s) 15, 96, 317
AclWI GGATC 2 cut(s) 788, 1120
AcoI YGGCCR 1 cut(s) 1054
AcsI RAATTY 1 cut(s) 982
AcuI CTGAAG 1 cut(s) 927
AdeI CACNNNGTG 1 cut(s) 1067
AfaI GTAC 5 cut(s) 214, 272, 416, 952, 1078
AfiI CCNNNNNNNGG 4 cut(s) 190, 191, 326, 656
AgsI TTSAA 9 cut(s) 243, 265, 335, 469, 485, 732, 852, 902, 927
AjnI CCWGG 7 cut(s) 81, 120, 160, 325, 796, 808, 1092
AluBI AGCT 7 cut(s) 50, 134, 578, 755, 905, 911, 1170
AluI AGCT 7 cut(s) 50, 134, 578, 755, 905, 911, 1170
Alw21I GWGCWC 2 cut(s) 14, 1105
Alw26I GTCTC 1 cut(s) 867
AlwI GGATC 2 cut(s) 788, 1120
AlwNI CAGNNNCTG 1 cut(s) 1089
AoxI GGCC 5 cut(s) 39, 158, 220, 668, 1054
ApeKI GCWGC 4 cut(s) 98, 140, 143, 965
ApoI RAATTY 1 cut(s) 982
ArsI GACNNNNNNTTYG 4 cut(s) 845, 877, 1187, 1219
AseI ATTAAT 1 cut(s) 249
Asp718I GGTACC 1 cut(s) 950
AspLEI GCGC 1 cut(s) 116
AspS9I GGNCC 3 cut(s) 39, 158, 669
AsuHPI GGTGA 5 cut(s) 79, 295, 671, 709, 814
BanI GGYRCC 1 cut(s) 950
BbsI GAAGAC 1 cut(s) 366
Bbv12I GWGCWC 2 cut(s) 14, 1105
BbvI GCAGC 4 cut(s) 85, 152, 155, 977
BccI CCATC 5 cut(s) 679, 719, 937, 1010, 1252
BciT130I CCWGG 7 cut(s) 83, 122, 162, 327, 798, 810, 1094
BciVI GTATCC 1 cut(s) 649
BcoDI GTCTC 1 cut(s) 867
BfaI CTAG 3 cut(s) 128, 743, 1140
BfoI RGCGCY 1 cut(s) 117
BfuAI ACCTGC 1 cut(s) 496
BfuI GTATCC 1 cut(s) 649
BglI GCCNNNNNGGC 1 cut(s) 1094
BisI GCNGC 4 cut(s) 99, 141, 144, 966
BlsI GCNGC 4 cut(s) 100, 142, 145, 967
BmcAI AGTACT 1 cut(s) 1078
Bme1390I CCNGG 7 cut(s) 83, 122, 162, 327, 798, 810, 1094
BmgT120I GGNCC 3 cut(s) 39, 158, 669
BmiI GGNNCC 1 cut(s) 952
BmrFI CCNGG 7 cut(s) 83, 122, 162, 327, 798, 810, 1094
BmsI GCATC 4 cut(s) 301, 312, 966, 1024
BpiI GAAGAC 1 cut(s) 366
BpmI CTGGAG 3 cut(s) 581, 810, 1119
BpuEI CTTGAG 1 cut(s) 956
BsaJI CCNNGG 3 cut(s) 25, 650, 797
BsaXI ACNNNNNCTCC 2 cut(s) 1011, 1041
Bsc4I CCNNNNNNNGG 4 cut(s) 190, 191, 326, 656
Bse118I RCCGGY 1 cut(s) 702
Bse1I ACTGG 4 cut(s) 564, 896, 1148, 1180
Bse3DI GCAATG 1 cut(s) 467
BseBI CCWGG 7 cut(s) 83, 122, 162, 327, 798, 810, 1094
BseDI CCNNGG 3 cut(s) 25, 650, 797
BseGI GGATG 1 cut(s) 415
BseLI CCNNNNNNNGG 4 cut(s) 190, 191, 326, 656
BseMI GCAATG 1 cut(s) 467
BseMII CTCAG 2 cut(s) 90, 672
BseNI ACTGG 4 cut(s) 564, 896, 1148, 1180
BseRI GAGGAG 2 cut(s) 953, 1024
BseXI GCAGC 4 cut(s) 85, 152, 155, 977
BseYI CCCAGC 1 cut(s) 611
BsgI GTGCAG 1 cut(s) 159
BshFI GGCC 5 cut(s) 41, 160, 222, 670, 1056
BshNI GGYRCC 1 cut(s) 950
BsiHKAI GWGCWC 2 cut(s) 14, 1105
BsiSI CCGG 2 cut(s) 703, 1057
BslFI GGGAC 1 cut(s) 411
BslI CCNNNNNNNGG 4 cut(s) 190, 191, 326, 656
BsmAI GTCTC 1 cut(s) 867
BsmBI CGTCTC 1 cut(s) 867
BsmFI GGGAC 1 cut(s) 411
BsmI GAATGC 1 cut(s) 922
BsnI GGCC 5 cut(s) 41, 160, 222, 670, 1056
Bsp1286I GDGCHC 2 cut(s) 14, 1105
Bsp143I GATC 2 cut(s) 793, 1112
BspACI CCGC 3 cut(s) 15, 96, 317
BspANI GGCC 5 cut(s) 41, 160, 222, 670, 1056
BspCNI CTCAG 2 cut(s) 89, 673
BspLI GGNNCC 1 cut(s) 952
BspMI ACCTGC 1 cut(s) 496
BspPI GGATC 2 cut(s) 788, 1120
BspT107I GGYRCC 1 cut(s) 950
BsrDI GCAATG 1 cut(s) 467
BsrFI RCCGGY 1 cut(s) 702
BsrI ACTGG 4 cut(s) 564, 896, 1148, 1180
BssAI RCCGGY 1 cut(s) 702
BssECI CCNNGG 3 cut(s) 25, 650, 797
BssMI GATC 2 cut(s) 793, 1112
Bst2UI CCWGG 7 cut(s) 83, 122, 162, 327, 798, 810, 1094
Bst4CI ACNGT 8 cut(s) 9, 26, 155, 173, 367, 676, 1081, 1210
Bst6I CTCTTC 1 cut(s) 77
BstAPI GCANNNNNTGC 1 cut(s) 1199
BstC8I GCNNGC 4 cut(s) 103, 118, 913, 1090
BstDEI CTNAG 3 cut(s) 76, 606, 681
BstDSI CCRYGG 1 cut(s) 25
BstEII GGTNACC 2 cut(s) 53, 85
BstF5I GGATG 1 cut(s) 415
BstH2I RGCGCY 1 cut(s) 117
BstHHI GCGC 1 cut(s) 116
BstKTI GATC 2 cut(s) 796, 1115
BstMAI GTCTC 1 cut(s) 867
BstMBI GATC 2 cut(s) 793, 1112
BstMWI GCNNNNNNNGC 7 cut(s) 47, 111, 140, 971, 1094, 1176, 1199
BstNI CCWGG 7 cut(s) 83, 122, 162, 327, 798, 810, 1094
BstPI GGTNACC 2 cut(s) 53, 85
BstSCI CCNGG 7 cut(s) 81, 120, 160, 325, 796, 808, 1092
BstV1I GCAGC 4 cut(s) 85, 152, 155, 977
BstV2I GAAGAC 1 cut(s) 366
BstX2I RGATCY 2 cut(s) 793, 1112
BstXI CCANNNNNNTGG 1 cut(s) 559
BstYI RGATCY 2 cut(s) 793, 1112
BsuI GTATCC 1 cut(s) 649
BsuRI GGCC 5 cut(s) 41, 160, 222, 670, 1056
BtgI CCRYGG 1 cut(s) 25
BtgZI GCGATG 1 cut(s) 989
BtsCI GGATG 1 cut(s) 415
BtsI GCAGTG 1 cut(s) 474
BtsIMutI CAGTG 4 cut(s) 474, 672, 1090, 1155
BveI ACCTGC 1 cut(s) 496
Cac8I GCNNGC 4 cut(s) 103, 118, 913, 1090
CaiI CAGNNNCTG 1 cut(s) 1089
CfoI GCGC 1 cut(s) 116
Cfr10I RCCGGY 1 cut(s) 702
Cfr13I GGNCC 3 cut(s) 39, 158, 669
CseI GACGC 2 cut(s) 849, 1191
Csp6I GTAC 5 cut(s) 213, 271, 415, 951, 1077
CviAII CATG 3 cut(s) 276, 816, 1006
CviQI GTAC 5 cut(s) 213, 271, 415, 951, 1077
DdeI CTNAG 3 cut(s) 76, 606, 681
DpnI GATC 2 cut(s) 795, 1114
DpnII GATC 2 cut(s) 793, 1112
DraIII CACNNNGTG 1 cut(s) 1067
EaeI YGGCCR 1 cut(s) 1054
Eam1104I CTCTTC 1 cut(s) 77
EarI CTCTTC 1 cut(s) 77
Eco32I GATATC 1 cut(s) 433
Eco57I CTGAAG 1 cut(s) 927
Eco91I GGTNACC 2 cut(s) 53, 85
EcoO109I RGGNCCY 1 cut(s) 39
EcoO65I GGTNACC 2 cut(s) 53, 85
EcoRII CCWGG 7 cut(s) 81, 120, 160, 325, 796, 808, 1092
EcoRV GATATC 1 cut(s) 433
Esp3I CGTCTC 1 cut(s) 867
FaeI CATG 3 cut(s) 279, 819, 1009
FaqI GGGAC 1 cut(s) 411
FatI CATG 3 cut(s) 275, 815, 1005
Fnu4HI GCNGC 4 cut(s) 99, 141, 144, 966
FokI GGATG 1 cut(s) 422
Fsp4HI GCNGC 4 cut(s) 99, 141, 144, 966
FspBI CTAG 3 cut(s) 128, 743, 1140
GlaI GCGC 1 cut(s) 115
GluI GCNGC 4 cut(s) 99, 141, 144, 966
GsaI CCCAGC 1 cut(s) 615
GsuI CTGGAG 3 cut(s) 581, 810, 1119
HaeII RGCGCY 1 cut(s) 117
HaeIII GGCC 5 cut(s) 41, 160, 222, 670, 1056
HapII CCGG 2 cut(s) 703, 1057
HgaI GACGC 2 cut(s) 849, 1191
HhaI GCGC 1 cut(s) 116
Hin1II CATG 3 cut(s) 279, 819, 1009
Hin6I GCGC 1 cut(s) 114
HinP1I GCGC 1 cut(s) 114
HincII GTYRAC 2 cut(s) 997, 1206
HindII GTYRAC 2 cut(s) 997, 1206
HindIII AAGCTT 3 cut(s) 132, 909, 1168
HinfI GANTC 5 cut(s) 199, 286, 785, 833, 1222
HpaII CCGG 2 cut(s) 703, 1057
HphI GGTGA 5 cut(s) 79, 295, 671, 709, 814
Hpy166II GTNNAC 4 cut(s) 273, 415, 997, 1206
Hpy188I TCNGA 4 cut(s) 456, 531, 724, 1221
Hpy188III TCNNGA 4 cut(s) 128, 356, 424, 789
Hpy8I GTNNAC 4 cut(s) 273, 415, 997, 1206
HpyAV CCTTC 2 cut(s) 649, 740
HpyCH4III ACNGT 8 cut(s) 9, 26, 155, 173, 367, 676, 1081, 1210
HpyF10VI GCNNNNNNNGC 7 cut(s) 47, 111, 140, 971, 1094, 1176, 1199
HpyF3I CTNAG 3 cut(s) 76, 606, 681
Hsp92II CATG 3 cut(s) 279, 819, 1009
HspAI GCGC 1 cut(s) 114
KpnI GGTACC 1 cut(s) 954
Kzo9I GATC 2 cut(s) 793, 1112
LmnI GCTCC 5 cut(s) 17, 110, 583, 919, 1100
Lsp1109I GCAGC 4 cut(s) 85, 152, 155, 977
LweI GCATC 4 cut(s) 301, 312, 966, 1024
MaeI CTAG 3 cut(s) 128, 743, 1140
MaeIII GTNAC 9 cut(s) 53, 66, 85, 283, 367, 547, 676, 956, 1150
MalI GATC 2 cut(s) 795, 1114
MboI GATC 2 cut(s) 793, 1112
MboII GAAGA 4 cut(s) 64, 371, 674, 862
MflI RGATCY 2 cut(s) 793, 1112
MhlI GDGCHC 2 cut(s) 14, 1105
MluCI AATT 5 cut(s) 243, 492, 847, 877, 982
MlyI GAGTC 1 cut(s) 280
MmeI TCCRAC 1 cut(s) 387
MseI TTAA 6 cut(s) 249, 380, 495, 524, 590, 846
MspA1I CMGCKG 2 cut(s) 50, 98
MspI CCGG 2 cut(s) 703, 1057
MspR9I CCNGG 7 cut(s) 83, 122, 162, 327, 798, 810, 1094
Mva1269I GAATGC 1 cut(s) 922
MvaI CCWGG 7 cut(s) 83, 122, 162, 327, 798, 810, 1094
MwoI GCNNNNNNNGC 7 cut(s) 47, 111, 140, 971, 1094, 1176, 1199
NdeII GATC 2 cut(s) 793, 1112
NlaIII CATG 3 cut(s) 279, 819, 1009
NlaIV GGNNCC 1 cut(s) 952
NmeAIII GCCGAG 1 cut(s) 675
NmuCI GTSAC 5 cut(s) 85, 283, 547, 676, 1150
PctI GAATGC 1 cut(s) 922
PfeI GAWTC 4 cut(s) 199, 785, 833, 1222
PkrI GCNGC 4 cut(s) 100, 142, 145, 967
PleI GAGTC 1 cut(s) 280
PpsI GAGTC 1 cut(s) 280
PshBI ATTAAT 1 cut(s) 249
Psp6I CCWGG 7 cut(s) 81, 120, 160, 325, 796, 808, 1092
PspEI GGTNACC 2 cut(s) 53, 85
PspFI CCCAGC 1 cut(s) 611
PspGI CCWGG 7 cut(s) 81, 120, 160, 325, 796, 808, 1092
PspN4I GGNNCC 1 cut(s) 952
PspPI GGNCC 3 cut(s) 39, 158, 669
PstNI CAGNNNCTG 1 cut(s) 1089
PsuI RGATCY 2 cut(s) 793, 1112
PvuII CAGCTG 1 cut(s) 50
RsaI GTAC 5 cut(s) 214, 272, 416, 952, 1078
RsaNI GTAC 5 cut(s) 213, 271, 415, 951, 1077
SaqAI TTAA 6 cut(s) 249, 380, 495, 524, 590, 846
SatI GCNGC 4 cut(s) 99, 141, 144, 966
Sau3AI GATC 2 cut(s) 793, 1112
Sau96I GGNCC 3 cut(s) 39, 158, 669
ScaI AGTACT 1 cut(s) 1078
SchI GAGTC 1 cut(s) 280
ScrFI CCNGG 7 cut(s) 83, 122, 162, 327, 798, 810, 1094
SduI GDGCHC 2 cut(s) 14, 1105
SfaNI GCATC 4 cut(s) 301, 312, 966, 1024
SmlI CTYRAG 1 cut(s) 935
SmoI CTYRAG 1 cut(s) 935
Sse9I AATT 5 cut(s) 243, 492, 847, 877, 982
SsiI CCGC 3 cut(s) 15, 96, 317
SspI AATATT 1 cut(s) 626
SspMI CTAG 3 cut(s) 128, 743, 1140
StyD4I CCNGG 7 cut(s) 81, 120, 160, 325, 796, 808, 1092
TaaI ACNGT 8 cut(s) 9, 26, 155, 173, 367, 676, 1081, 1210
TaqI TCGA 1 cut(s) 423
TasI AATT 5 cut(s) 243, 492, 847, 877, 982
TatI WGTACW 2 cut(s) 270, 1076
TfiI GAWTC 4 cut(s) 199, 785, 833, 1222
Tru1I TTAA 6 cut(s) 249, 380, 495, 524, 590, 846
Tru9I TTAA 6 cut(s) 249, 380, 495, 524, 590, 846
TscAI CASTG 4 cut(s) 481, 679, 1090, 1155
TseFI GTSAC 5 cut(s) 85, 283, 547, 676, 1150
TseI GCWGC 4 cut(s) 98, 140, 143, 965
Tsp45I GTSAC 5 cut(s) 85, 283, 547, 676, 1150
TspDTI ATGAA 1 cut(s) 1064
TspGWI ACGGA 1 cut(s) 521
TspRI CASTG 4 cut(s) 481, 679, 1090, 1155
VspI ATTAAT 1 cut(s) 249
XapI RAATTY 1 cut(s) 982
XbaI TCTAGA 1 cut(s) 127
XspI CTAG 3 cut(s) 128, 743, 1140
ZrmI AGTACT 1 cut(s) 1078
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.