Prupe.7G133400_v2.0.a1

Protein of unknown function (DUF1685)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
15185543 .. 15187263
1721 bp
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UTR
Exon/CDS
Intron
Prupe.7G133400.1

Sequence Viewer

Length: 468 bp
ATGTCTGAACCGCACGCCCCGCCTCCTCCGCCGCTCTATAAGCAGCATTCCTGGTCCCCTGACGCCTACCGAGACGAGGCATGGCACCGCCGCAAGAAGATCAACGGCAGATCGAAGCTCCAGCGCAGCAAGAGCGTCACTGACGAAGACCTCGACGAGTTGAAAGCCTGCATCGAACTCGGGTTCGGGTTTAACTCGCCCGAGTCGGATCAGCGGCTCGCCGACACCCTGCCCGCTTTGGGACTTTACTACGCGGTTAACAAGAGTTATTACGACTCGGTATCTCACAAGTCTACGACGACCCCAACGTCGTCGTTTTCGCCAACCCCGTCCGAGTGCGACTCGGTGCCCTCCCCCGTGGGCAGCCCGCATACAATCTTCGGACCCGGAGATACGCCGCAGACGGTGAAGGCGCGGTTGAGGCAGTGGGCCCAGGTGGTTGCGTGCACGGTGAGGCAGAGTTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

156

Amino Acids

17.19

Weight (kDa)

7.75

Isoelectric Point (pI)

87.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012887)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G50350 AT3G50350
fragaria_vesca FvH4_1g16050
malus_domestica MD02G1171900.v1.1 MD15G1283800.v1.1
prunus_persica Prupe.7G133400_v2.0.a1
pyrus_communis pycom02g13860 pycom15g24680
rosa_chinensis RchiOBHm_Chr2g0105661
rosa_laevigata RLG00000017447
rosa_multiflora Rmu_sc0001051.1_g000050
rosa_roxburghii Rroxscaffold_2G00138010
rosa_rugosa Rorug02G0129100
rosa_samantha Rh2AG180700 Rh2BG189600 Rh2CG184900 Rh2DG186700
rosa_wichuraiana Rw2G014120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 307
AccB1I GGYRCC 2 cut(s) 84, 346
AccBSI CCGCTC 1 cut(s) 34
AccI GTMKAC 1 cut(s) 293
AccII CGCG 2 cut(s) 254, 415
AclWI GGATC 1 cut(s) 216
AcyI GRCGYC 1 cut(s) 63
AfiI CCNNNNNNNGG 2 cut(s) 76, 239
AgsI TTSAA 1 cut(s) 163
AjnI CCWGG 2 cut(s) 50, 432
AluBI AGCT 1 cut(s) 118
AluI AGCT 1 cut(s) 118
Alw21I GWGCWC 1 cut(s) 449
Alw26I GTCTC 1 cut(s) 66
Alw44I GTGCAC 1 cut(s) 445
AlwI GGATC 1 cut(s) 216
Ama87I CYCGRG 2 cut(s) 179, 200
AoxI GGCC 1 cut(s) 429
ApaI GGGCCC 1 cut(s) 433
ApaLI GTGCAC 1 cut(s) 445
ApeKI GCWGC 3 cut(s) 43, 126, 363
AspLEI GCGC 2 cut(s) 126, 415
AspS9I GGNCC 4 cut(s) 54, 383, 429, 430
AsuC2I CCSGG 1 cut(s) 387
AsuHPI GGTGA 2 cut(s) 418, 463
AvaI CYCGRG 2 cut(s) 179, 200
AvaII GGWCC 2 cut(s) 54, 383
BaeGI GKGCMC 3 cut(s) 351, 433, 449
BanI GGYRCC 2 cut(s) 84, 346
BanII GRGCYC 1 cut(s) 433
BbsI GAAGAC 1 cut(s) 153
Bbv12I GWGCWC 1 cut(s) 449
BbvI GCAGC 3 cut(s) 55, 138, 375
BceAI ACGGC 1 cut(s) 121
BcgI CGANNNNNNTGC 2 cut(s) 160, 194
BciT130I CCWGG 2 cut(s) 52, 434
BcnI CCSGG 1 cut(s) 387
BcoDI GTCTC 1 cut(s) 66
BisI GCNGC 7 cut(s) 32, 44, 91, 127, 215, 364, 398
BlsI GCNGC 7 cut(s) 33, 45, 92, 128, 216, 365, 399
Bme1390I CCNGG 3 cut(s) 52, 387, 434
Bme18I GGWCC 2 cut(s) 54, 383
BmeT110I CYCGRG 2 cut(s) 179, 200
BmgT120I GGNCC 4 cut(s) 54, 383, 429, 430
BmiI GGNNCC 5 cut(s) 56, 86, 348, 385, 431
BmrFI CCNGG 3 cut(s) 52, 387, 434
BmsI GCATC 1 cut(s) 180
BpiI GAAGAC 1 cut(s) 153
BplI GAGNNNNNCTC 2 cut(s) 326, 358
BpmI CTGGAG 1 cut(s) 104
BpuMI CCSGG 1 cut(s) 387
BsaHI GRCGYC 1 cut(s) 63
BsaJI CCNNGG 2 cut(s) 357, 432
Bsc4I CCNNNNNNNGG 2 cut(s) 76, 239
BseBI CCWGG 2 cut(s) 52, 434
BseDI CCNNGG 2 cut(s) 357, 432
BseLI CCNNNNNNNGG 2 cut(s) 76, 239
BseRI GAGGAG 1 cut(s) 15
BseSI GKGCMC 3 cut(s) 351, 433, 449
BseXI GCAGC 3 cut(s) 55, 138, 375
Bsh1236I CGCG 2 cut(s) 254, 415
BshFI GGCC 1 cut(s) 431
BshNI GGYRCC 2 cut(s) 84, 346
BsiHKAI GWGCWC 1 cut(s) 449
BsiHKCI CYCGRG 2 cut(s) 179, 200
BsiSI CCGG 1 cut(s) 387
BslFI GGGAC 2 cut(s) 40, 255
BslI CCNNNNNNNGG 2 cut(s) 76, 239
BsmAI GTCTC 1 cut(s) 66
BsmBI CGTCTC 1 cut(s) 66
BsmFI GGGAC 2 cut(s) 40, 255
BsmI GAATGC 1 cut(s) 46
BsnI GGCC 1 cut(s) 431
BsoBI CYCGRG 2 cut(s) 179, 200
Bsp120I GGGCCC 1 cut(s) 429
Bsp1286I GDGCHC 3 cut(s) 351, 433, 449
Bsp143I GATC 3 cut(s) 99, 110, 208
BspANI GGCC 1 cut(s) 431
BspFNI CGCG 2 cut(s) 254, 415
BspLI GGNNCC 5 cut(s) 56, 86, 348, 385, 431
BspPI GGATC 1 cut(s) 216
BspT107I GGYRCC 2 cut(s) 84, 346
BsrBI CCGCTC 1 cut(s) 34
BssECI CCNNGG 2 cut(s) 357, 432
BssMI GATC 3 cut(s) 99, 110, 208
BssNI GRCGYC 1 cut(s) 63
Bst2UI CCWGG 2 cut(s) 52, 434
Bst4CI ACNGT 2 cut(s) 406, 451
BstACI GRCGYC 1 cut(s) 63
BstC8I GCNNGC 6 cut(s) 15, 169, 219, 234, 368, 445
BstDSI CCRYGG 1 cut(s) 357
BstFNI CGCG 2 cut(s) 254, 415
BstHHI GCGC 2 cut(s) 126, 415
BstKTI GATC 3 cut(s) 102, 113, 211
BstMAI GTCTC 1 cut(s) 66
BstMBI GATC 3 cut(s) 99, 110, 208
BstMWI GCNNNNNNNGC 5 cut(s) 19, 28, 40, 132, 421
BstNI CCWGG 2 cut(s) 52, 434
BstSCI CCNGG 3 cut(s) 50, 385, 432
BstSLI GKGCMC 3 cut(s) 351, 433, 449
BstUI CGCG 2 cut(s) 254, 415
BstV1I GCAGC 3 cut(s) 55, 138, 375
BstV2I GAAGAC 1 cut(s) 153
BsuRI GGCC 1 cut(s) 431
BtgI CCRYGG 1 cut(s) 357
BtsI GCAGTG 1 cut(s) 431
BtsIMutI CAGTG 2 cut(s) 138, 431
Cac8I GCNNGC 6 cut(s) 15, 169, 219, 234, 368, 445
CfoI GCGC 2 cut(s) 126, 415
Cfr13I GGNCC 4 cut(s) 54, 383, 429, 430
CseI GACGC 2 cut(s) 71, 124
CviAII CATG 1 cut(s) 81
CviJI RGCY 5 cut(s) 118, 167, 217, 366, 431
CviKI_1 RGCY 5 cut(s) 118, 167, 217, 366, 431
DpnI GATC 3 cut(s) 101, 112, 210
DpnII GATC 3 cut(s) 99, 110, 208
DrdI GACNNNNNNGTC 1 cut(s) 307
DseDI GACNNNNNNGTC 1 cut(s) 307
EciI GGCGGA 1 cut(s) 18
Eco24I GRGCYC 1 cut(s) 433
Eco47I GGWCC 2 cut(s) 54, 383
Eco88I CYCGRG 2 cut(s) 179, 200
EcoRII CCWGG 2 cut(s) 50, 432
EcoT38I GRGCYC 1 cut(s) 433
Esp3I CGTCTC 1 cut(s) 66
FaeI CATG 1 cut(s) 84
FaiI YATR 3 cut(s) 39, 82, 372
FaqI GGGAC 2 cut(s) 40, 255
FatI CATG 1 cut(s) 80
FauI CCCGC 3 cut(s) 27, 241, 375
FblI GTMKAC 1 cut(s) 293
Fnu4HI GCNGC 7 cut(s) 32, 44, 91, 127, 215, 364, 398
FriOI GRGCYC 1 cut(s) 433
Fsp4HI GCNGC 7 cut(s) 32, 44, 91, 127, 215, 364, 398
GlaI GCGC 2 cut(s) 125, 414
GluI GCNGC 7 cut(s) 32, 44, 91, 127, 215, 364, 398
GsuI CTGGAG 1 cut(s) 104
HaeIII GGCC 1 cut(s) 431
HapII CCGG 1 cut(s) 387
HgaI GACGC 2 cut(s) 71, 124
HhaI GCGC 2 cut(s) 126, 415
Hin1I GRCGYC 1 cut(s) 63
Hin1II CATG 1 cut(s) 84
Hin6I GCGC 2 cut(s) 124, 413
HinP1I GCGC 2 cut(s) 124, 413
HincII GTYRAC 1 cut(s) 259
HindII GTYRAC 1 cut(s) 259
HinfI GANTC 3 cut(s) 203, 275, 341
HpaI GTTAAC 1 cut(s) 259
HpaII CCGG 1 cut(s) 387
HphI GGTGA 2 cut(s) 418, 463
Hpy166II GTNNAC 3 cut(s) 259, 294, 447
Hpy188I TCNGA 4 cut(s) 7, 208, 334, 383
Hpy188III TCNNGA 1 cut(s) 465
Hpy8I GTNNAC 3 cut(s) 259, 294, 447
Hpy99I CGWCG 4 cut(s) 158, 301, 313, 316
HpyAV CCTTC 1 cut(s) 403
HpyCH4III ACNGT 2 cut(s) 406, 451
HpyCH4IV ACGT 1 cut(s) 308
HpyCH4V TGCA 2 cut(s) 171, 447
HpyF10VI GCNNNNNNNGC 5 cut(s) 19, 28, 40, 132, 421
HpySE526I ACGT 1 cut(s) 308
Hsp92I GRCGYC 1 cut(s) 63
Hsp92II CATG 1 cut(s) 84
HspAI GCGC 2 cut(s) 124, 413
KspAI GTTAAC 1 cut(s) 259
Kzo9I GATC 3 cut(s) 99, 110, 208
LmnI GCTCC 1 cut(s) 123
LpnPI CCDG 9 cut(s) 37, 64, 72, 134, 181, 242, 400, 419, 446
Lsp1109I GCAGC 3 cut(s) 55, 138, 375
LweI GCATC 1 cut(s) 180
MaeII ACGT 1 cut(s) 308
MaeIII GTNAC 1 cut(s) 136
MalI GATC 3 cut(s) 101, 112, 210
MbiI CCGCTC 1 cut(s) 34
MboI GATC 3 cut(s) 99, 110, 208
MboII GAAGA 3 cut(s) 109, 158, 370
MhlI GDGCHC 3 cut(s) 351, 433, 449
MlyI GAGTC 3 cut(s) 212, 269, 335
MmeI TCCRAC 1 cut(s) 186
MnlI CCTC 7 cut(s) 33, 36, 70, 161, 361, 414, 447
MseI TTAA 2 cut(s) 192, 258
MspA1I CMGCKG 1 cut(s) 214
MspI CCGG 1 cut(s) 387
MspR9I CCNGG 3 cut(s) 52, 387, 434
Mva1269I GAATGC 1 cut(s) 46
MvaI CCWGG 2 cut(s) 52, 434
MvnI CGCG 2 cut(s) 254, 415
MwoI GCNNNNNNNGC 5 cut(s) 19, 28, 40, 132, 421
NciI CCSGG 1 cut(s) 387
NdeII GATC 3 cut(s) 99, 110, 208
NlaIII CATG 1 cut(s) 84
NlaIV GGNNCC 5 cut(s) 56, 86, 348, 385, 431
NmuCI GTSAC 1 cut(s) 136
PcsI WCGNNNNNNNCGW 3 cut(s) 150, 305, 326
PctI GAATGC 1 cut(s) 46
PkrI GCNGC 7 cut(s) 33, 45, 92, 128, 216, 365, 399
PleI GAGTC 3 cut(s) 211, 269, 335
PpsI GAGTC 3 cut(s) 211, 269, 335
Psp6I CCWGG 2 cut(s) 50, 432
PspGI CCWGG 2 cut(s) 50, 432
PspN4I GGNNCC 5 cut(s) 56, 86, 348, 385, 431
PspOMI GGGCCC 1 cut(s) 429
PspPI GGNCC 4 cut(s) 54, 383, 429, 430
SaqAI TTAA 2 cut(s) 192, 258
SatI GCNGC 7 cut(s) 32, 44, 91, 127, 215, 364, 398
Sau3AI GATC 3 cut(s) 99, 110, 208
Sau96I GGNCC 4 cut(s) 54, 383, 429, 430
SchI GAGTC 3 cut(s) 212, 269, 335
ScrFI CCNGG 3 cut(s) 52, 387, 434
SduI GDGCHC 3 cut(s) 351, 433, 449
SetI ASST 4 cut(s) 120, 153, 311, 438
SfaNI GCATC 1 cut(s) 180
SinI GGWCC 2 cut(s) 54, 383
StyD4I CCNGG 3 cut(s) 50, 385, 432
TaaI ACNGT 2 cut(s) 406, 451
TaiI ACGT 1 cut(s) 311
TaqI TCGA 3 cut(s) 113, 153, 174
TauI GCSGC 4 cut(s) 34, 93, 217, 400
Tru1I TTAA 2 cut(s) 192, 258
Tru9I TTAA 2 cut(s) 192, 258
TscAI CASTG 2 cut(s) 145, 431
TseFI GTSAC 1 cut(s) 136
TseI GCWGC 3 cut(s) 43, 126, 363
Tsp45I GTSAC 1 cut(s) 136
TspRI CASTG 2 cut(s) 145, 431
VneI GTGCAC 1 cut(s) 445
VpaK11BI GGWCC 2 cut(s) 54, 383
XmiI GTMKAC 1 cut(s) 293
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.