Rorug02G0129100

Protein of unknown function (DUF1685)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0012887
Physical Location & Seq
Reverse (-)
11131012 .. 11137382
6371 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0129100.1

Sequence Viewer

Length: 2091 bp
ATGATGCAGAGACCCCGACGACGCTGCGAAGGCACCGCCATGGGCGCCATCGTCCTCGATCTTCGTCCCGGCTTCGGAATCGGACCTTTCTCTCTCGGAATGCCGATATGCGAAGCTTTTGCTCAGATAGAGCAGCAGCCTAACATCTATGATGTTGTTCATGTCAAGTATTATGATGAGGAGCCTCTTAAGTTGGACATTGTTATCAGCTTTCCTGATCATGGTTTCCATCTGCGATTTGATCCTTGGTCACAGAGACTCCGCCTTGTTGAAATATTTGACATAAAGAGGCTTCAGATGCGCTATGCCACGTCTTTGATTGGAGGGCCATCCACTCTGGCGACTTTCGTAGCTGTTTATGCCTTGTTTGGGCCAACATTTCCTGGAATTTATGATCAAGATAGAGGTGTCTACAATCTATTTTACCCAGGGCTTTCATTTGCTTTTCCTATTCCTAGCCAGTATACAGATTGCGTTCATGATAGAGAAGCGGAACTACCTCTAGAGTTCCCGGATGGAACTACACCAGTTACATGCCGCGTGTCCATATACGATAGTTCTACCGATAAAAAAGTTGGTGTCGGATCCTTGATGGATAAGGCTTCTGCTCCTCCATTACCTATTGGCAGTGTCTATATGGAAGAGGTGCATGTCAAGCTAGCGGAAGAACTACACTTCACTGTTGGGGGCCAGAATATTCCTTTTGGTGCCTCACCTCAGGATGTTTGGACTGAATTGGGTCGTCCTTGTGGGATACATCAAAAGCAGGTAGACCAAATGGTCATTCATTCTGGCTTGGATCCTCGCCCACGGACAACATTGTGTGGTGATTACTTCTACAATTACTTTACCCGTGGTTTGGACATTTTATTTGATGGGCAGACTCATAAAGTCAAGAAGTTTGTTCTGCATACAAATTATCCTGGTCATGCCGATTTCAATTCATATATAAAGTGCAACTTTGTCATATTTGCTTCTGAGTTTGGGGGTTCTTTTCAGGAGGTAAATAATTGCAAGCACAAGATTACCCCAAGTACAAAGTGGGAGCATGTAAAGGAAATTCTTGGGGACTGTGGTCGAGCTGCCATCCAGACACAAGGTTCTACAAGCAATCCGTTTGGATCTACTTTTGTATATGGTTATCAAAACATTGCACTTGAGGTGAGTGATGAAGAATGGTTACATTGCAACAGTGACTCTCTTTCAGTCATGATGGTGATAAAATGCGTGGGAGTATTCATCGTAAAGATGAGTTCTGTAGCTGGGCTCACTGGTAGTCCATCCAGATGCTGCTTTCAAGTATCTGTGGGAAGTTCCGCTTCTCGGTGCAGGAGAGTTTCCAACCTCCCTCGTGCAGAGAAGAGTGTGCTGCTTCGTGCCGAAAGAAGTTATTGGGCTGGCGTTACACAAAGATTGAATGCAAGGAAAACTCATGTGATCAAGTGTTCCATGGATGCTTCCTTTGGTGATATGTCAAATGAACCAACTGCTATCTTTCCTAGGATTAATGTGAGGGACCCATACAAACGGCTTGGGATAAGCAGGGAGGCTTCTGAAGAAGAAATTCAAGGTGCAAGGAACTTCCTTATCCGACAGTATGCTGGTCACAAACCAAGTGAAGATGCAGTTGAATCAGCATATGACAAAATAATCATGCAGCAGTTTTATGCTAGGAAGAACCCAAATATCGACTTTAAGAAAAAGTTTAGGGCAGTCAGTCAGTCCCGTGTAGTGCAGGCTGTGAGAAGTAGGTTCCGCACTCCAGCCACACAGTTCATTATAAAAACTTCCATTGCATTTATAGTGCTGGGAGCCCTCACTTTTCTGTTCCCAACCGAAGAAGGTCCAACCCTTCAAGTAGCCATTTCTTTGTTGGCCACCATATATTTCATACATGAAAGACTACAGAGCAAATGGCGAGCTTTTCTCTACAGTGCTGGAGCATTTGTTTTCTCATGGCTGGTGGGAACTTTCTTGATGGTGGCTGTGATTCCACCCATACCTTTCATTAAAGGACTAAGGAGTTTTGAGGTGATAACTTCACTCATAACTTATGTTCTACTCTGGGTCGCGTCTACTTATCTGAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1685

Protein Analysis

696

Amino Acids

78.28

Weight (kDa)

8.71

Isoelectric Point (pI)

44.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PHAF1 PF03676 27 - 391 7.5e-132 Phagosome assembly factor 1
CPP1-like PF11833 516 - 695 4.6e-52 Protein CHAPERONE-LIKE PROTEIN OF POR1-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012887)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G50350 AT3G50350
fragaria_vesca FvH4_1g16050
malus_domestica MD02G1171900.v1.1 MD15G1283800.v1.1
prunus_persica Prupe.7G133400_v2.0.a1
pyrus_communis pycom02g13860 pycom15g24680
rosa_chinensis RchiOBHm_Chr2g0105661
rosa_laevigata RLG00000017447
rosa_multiflora Rmu_sc0001051.1_g000050
rosa_roxburghii Rroxscaffold_2G00138010
rosa_rugosa Rorug02G0129100
rosa_samantha Rh2AG180700 Rh2BG189600 Rh2CG184900 Rh2DG186700
rosa_wichuraiana Rw2G014120

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1781
AasI GACNNNNNNGTC 1 cut(s) 779
Acc36I ACCTGC 1 cut(s) 757
AccB1I GGYRCC 3 cut(s) 32, 44, 707
AccI GTMKAC 4 cut(s) 411, 464, 771, 2075
AccII CGCG 2 cut(s) 540, 2072
AciI CCGC 7 cut(s) 36, 262, 491, 538, 662, 1317, 1756
AclWI GGATC 6 cut(s) 236, 579, 592, 794, 807, 1129
AcoI YGGCCR 1 cut(s) 1875
AcsI RAATTY 3 cut(s) 387, 1059, 1563
AcuI CTGAAG 2 cut(s) 278, 1575
AcyI GRCGYC 1 cut(s) 45
AfaI GTAC 1 cut(s) 1036
AfiI CCNNNNNNNGG 5 cut(s) 74, 221, 369, 859, 1323
AflII CTTAAG 1 cut(s) 188
AgsI TTSAA 7 cut(s) 272, 940, 1298, 1417, 1568, 1631, 1856
AjiI CACGTC 1 cut(s) 312
AjnI CCWGG 3 cut(s) 382, 427, 922
AjuI GAANNNNNNNTTGG 2 cut(s) 768, 800
AluBI AGCT 7 cut(s) 116, 210, 353, 658, 1082, 1262, 1922
AluI AGCT 7 cut(s) 116, 210, 353, 658, 1082, 1262, 1922
Alw26I GTCTC 2 cut(s) 4, 250
AlwI GGATC 6 cut(s) 236, 579, 592, 794, 807, 1129
AlwNI CAGNNNCTG 1 cut(s) 1290
AoxI GGCC 4 cut(s) 326, 371, 688, 1875
ApeKI GCWGC 7 cut(s) 24, 133, 136, 1082, 1290, 1369, 1657
ApoI RAATTY 3 cut(s) 387, 1059, 1563
ArsI GACNNNNNNTTYG 2 cut(s) 854, 886
AseI ATTAAT 1 cut(s) 1506
Asp700I GAANNNNTTC 1 cut(s) 1563
AspA2I CCTAGG 1 cut(s) 1499
AspLEI GCGC 2 cut(s) 47, 303
AspS9I GGNCC 6 cut(s) 83, 326, 371, 688, 1516, 1844
AsuC2I CCSGG 2 cut(s) 69, 512
AsuHPI GGTGA 6 cut(s) 705, 839, 1174, 1228, 1478, 2044
AsuNHI GCTAGC 1 cut(s) 658
AvaII GGWCC 3 cut(s) 83, 1516, 1844
AvrII CCTAGG 1 cut(s) 1499
AxyI CCTNAGG 1 cut(s) 717
BalI TGGCCA 1 cut(s) 1877
BamHI GGATCC 2 cut(s) 584, 799
BanI GGYRCC 3 cut(s) 32, 44, 707
BanII GRGCYC 2 cut(s) 1269, 1816
BarI GAAGNNNNNNTAC 4 cut(s) 480, 512, 1164, 1196
BauI CACGAG 1 cut(s) 1350
BbvI GCAGC 7 cut(s) 11, 145, 148, 1069, 1277, 1356, 1669
BceAI ACGGC 1 cut(s) 1544
BcgI CGANNNNNNTGC 4 cut(s) 6, 40, 101, 135
BciT130I CCWGG 3 cut(s) 384, 429, 924
BciVI GTATCC 1 cut(s) 747
BclI TGATCA 3 cut(s) 217, 394, 1437
BcnI CCSGG 2 cut(s) 69, 512
BcoDI GTCTC 2 cut(s) 4, 250
BfaI CTAG 5 cut(s) 456, 503, 659, 1500, 1671
BfmI CTRYAG 3 cut(s) 1257, 1904, 1930
BfoI RGCGCY 1 cut(s) 48
BfrI CTTAAG 1 cut(s) 188
BfuAI ACCTGC 1 cut(s) 757
BfuI GTATCC 1 cut(s) 747
BisI GCNGC 8 cut(s) 25, 134, 137, 538, 1083, 1291, 1370, 1658
BlnI CCTAGG 1 cut(s) 1499
BlsI GCNGC 8 cut(s) 26, 135, 138, 539, 1084, 1292, 1371, 1659
Bme1390I CCNGG 5 cut(s) 69, 384, 429, 512, 924
Bme18I GGWCC 3 cut(s) 83, 1516, 1844
BmgBI CACGTC 1 cut(s) 312
BmgT120I GGNCC 6 cut(s) 83, 326, 371, 688, 1516, 1844
BmrFI CCNGG 5 cut(s) 69, 384, 429, 512, 924
BmsI GCATC 4 cut(s) 288, 1277, 1444, 1612
BmtI GCTAGC 1 cut(s) 662
BoxI GACNNNNGTC 1 cut(s) 1074
BplI GAGNNNNNCTC 2 cut(s) 1911, 1943
BpmI CTGGAG 2 cut(s) 1746, 1959
BpuEI CTTGAG 1 cut(s) 1178
BpuMI CCSGG 2 cut(s) 69, 512
BsaHI GRCGYC 1 cut(s) 45
BsaI GGTCTC 1 cut(s) 4
BsaJI CCNNGG 8 cut(s) 39, 245, 427, 428, 809, 853, 1449, 1499
BsaXI ACNNNNNCTCC 4 cut(s) 243, 273, 1932, 1962
Bsc4I CCNNNNNNNGG 5 cut(s) 74, 221, 369, 859, 1323
Bse1I ACTGG 3 cut(s) 460, 527, 1276
Bse21I CCTNAGG 1 cut(s) 717
Bse3DI GCAATG 3 cut(s) 1149, 1183, 1791
BseBI CCWGG 3 cut(s) 384, 429, 924
BseDI CCNNGG 8 cut(s) 39, 245, 427, 428, 809, 853, 1449, 1499
BseGI GGATG 6 cut(s) 329, 520, 727, 1086, 1280, 1459
BseLI CCNNNNNNNGG 5 cut(s) 74, 221, 369, 859, 1323
BseMI GCAATG 3 cut(s) 1149, 1183, 1791
BseMII CTCAG 3 cut(s) 137, 731, 969
BseNI ACTGG 3 cut(s) 460, 527, 1276
BseRI GAGGAG 2 cut(s) 194, 600
BseXI GCAGC 7 cut(s) 11, 145, 148, 1069, 1277, 1356, 1669
BseYI CCCAGC 2 cut(s) 1262, 1807
BsgI GTGCAG 3 cut(s) 1348, 1374, 1754
Bsh1236I CGCG 2 cut(s) 540, 2072
BshFI GGCC 4 cut(s) 328, 373, 690, 1877
BshNI GGYRCC 3 cut(s) 32, 44, 707
BsiSI CCGG 2 cut(s) 69, 512
BslFI GGGAC 4 cut(s) 51, 1082, 1529, 1708
BslI CCNNNNNNNGG 5 cut(s) 74, 221, 369, 859, 1323
BsmAI GTCTC 2 cut(s) 4, 250
BsmFI GGGAC 4 cut(s) 51, 1082, 1529, 1708
BsmI GAATGC 2 cut(s) 105, 1423
BsnI GGCC 4 cut(s) 328, 373, 690, 1877
Bso31I GGTCTC 1 cut(s) 4
Bsp1286I GDGCHC 2 cut(s) 1269, 1816
Bsp143I GATC 8 cut(s) 58, 217, 241, 394, 584, 799, 1121, 1437
Bsp19I CCATGG 2 cut(s) 39, 1449
BspACI CCGC 7 cut(s) 36, 262, 491, 538, 662, 1317, 1756
BspANI GGCC 4 cut(s) 328, 373, 690, 1877
BspCNI CTCAG 3 cut(s) 136, 730, 970
BspFNI CGCG 2 cut(s) 540, 2072
BspHI TCATGA 2 cut(s) 478, 1209
BspMI ACCTGC 1 cut(s) 757
BspOI GCTAGC 1 cut(s) 662
BspPI GGATC 6 cut(s) 236, 579, 592, 794, 807, 1129
BspT107I GGYRCC 3 cut(s) 32, 44, 707
BspTI CTTAAG 1 cut(s) 188
BspTNI GGTCTC 1 cut(s) 4
BsrDI GCAATG 3 cut(s) 1149, 1183, 1791
BsrI ACTGG 3 cut(s) 460, 527, 1276
BssECI CCNNGG 8 cut(s) 39, 245, 427, 428, 809, 853, 1449, 1499
BssMI GATC 8 cut(s) 58, 217, 241, 394, 584, 799, 1121, 1437
BssNAI GTATAC 1 cut(s) 465
BssNI GRCGYC 1 cut(s) 45
BssSI CACGAG 1 cut(s) 1350
BssT1I CCWWGG 4 cut(s) 39, 245, 1449, 1499
Bst1107I GTATAC 1 cut(s) 465
Bst2BI CACGAG 1 cut(s) 1350
Bst2UI CCWGG 3 cut(s) 384, 429, 924
Bst4CI ACNGT 6 cut(s) 682, 1073, 1193, 1596, 1773, 1934
Bst6I CTCTTC 2 cut(s) 636, 1355
BstACI GRCGYC 1 cut(s) 45
BstAFI CTTAAG 1 cut(s) 188
BstC8I GCNNGC 5 cut(s) 660, 1016, 1399, 1737, 1920
BstDEI CTNAG 4 cut(s) 123, 717, 978, 2018
BstDSI CCRYGG 4 cut(s) 39, 809, 853, 1449
BstF5I GGATG 6 cut(s) 329, 520, 727, 1086, 1280, 1459
BstFNI CGCG 2 cut(s) 540, 2072
BstH2I RGCGCY 1 cut(s) 48
BstHHI GCGC 2 cut(s) 47, 303
BstKTI GATC 8 cut(s) 61, 220, 244, 397, 587, 802, 1124, 1440
BstMAI GTCTC 2 cut(s) 4, 250
BstMBI GATC 8 cut(s) 58, 217, 241, 394, 584, 799, 1121, 1437
BstMWI GCNNNNNNNGC 5 cut(s) 30, 44, 298, 359, 655
BstNI CCWGG 3 cut(s) 384, 429, 924
BstNSI RCATGY 3 cut(s) 537, 653, 1052
BstPAI GACNNNNGTC 1 cut(s) 1074
BstSCI CCNGG 5 cut(s) 67, 382, 427, 510, 922
BstSFI CTRYAG 3 cut(s) 1257, 1904, 1930
BstUI CGCG 2 cut(s) 540, 2072
BstV1I GCAGC 7 cut(s) 11, 145, 148, 1069, 1277, 1356, 1669
BstX2I RGATCY 3 cut(s) 584, 799, 1121
BstYI RGATCY 3 cut(s) 584, 799, 1121
BstZ17I GTATAC 1 cut(s) 465
Bsu36I CCTNAGG 1 cut(s) 717
BsuI GTATCC 1 cut(s) 747
BsuRI GGCC 4 cut(s) 328, 373, 690, 1877
BtgI CCRYGG 4 cut(s) 39, 809, 853, 1449
BtrI CACGTC 1 cut(s) 312
BtsCI GGATG 6 cut(s) 329, 520, 727, 1086, 1280, 1459
BtsI GCAGTG 1 cut(s) 634
BtsIMutI CAGTG 5 cut(s) 634, 678, 1198, 1269, 1939
BveI ACCTGC 1 cut(s) 757
Cac8I GCNNGC 5 cut(s) 660, 1016, 1399, 1737, 1920
CaiI CAGNNNCTG 1 cut(s) 1290
CciI TCATGA 2 cut(s) 478, 1209
CfoI GCGC 2 cut(s) 47, 303
Cfr13I GGNCC 6 cut(s) 83, 326, 371, 688, 1516, 1844
CseI GACGC 2 cut(s) 30, 2061
Csp6I GTAC 1 cut(s) 1035
CviQI GTAC 1 cut(s) 1035
DdeI CTNAG 4 cut(s) 123, 717, 978, 2018
DinI GGCGCC 1 cut(s) 46
DpnI GATC 8 cut(s) 60, 219, 243, 396, 586, 801, 1123, 1439
DpnII GATC 8 cut(s) 58, 217, 241, 394, 584, 799, 1121, 1437
DrdI GACNNNNNNGTC 1 cut(s) 779
DseDI GACNNNNNNGTC 1 cut(s) 779
EaeI YGGCCR 1 cut(s) 1875
Eam1104I CTCTTC 2 cut(s) 636, 1355
EarI CTCTTC 2 cut(s) 636, 1355
EciI GGCGGA 1 cut(s) 251
Eco130I CCWWGG 4 cut(s) 39, 245, 1449, 1499
Eco24I GRGCYC 2 cut(s) 1269, 1816
Eco31I GGTCTC 1 cut(s) 4
Eco47I GGWCC 3 cut(s) 83, 1516, 1844
Eco57I CTGAAG 2 cut(s) 278, 1575
Eco81I CCTNAGG 1 cut(s) 717
EcoO109I RGGNCCY 1 cut(s) 1516
EcoRII CCWGG 3 cut(s) 382, 427, 922
EcoT14I CCWWGG 4 cut(s) 39, 245, 1449, 1499
EcoT38I GRGCYC 2 cut(s) 1269, 1816
EgeI GGCGCC 1 cut(s) 46
EheI GGCGCC 1 cut(s) 46
ErhI CCWWGG 4 cut(s) 39, 245, 1449, 1499
FalI AAGNNNNNCTT 4 cut(s) 944, 976, 1303, 1335
FaqI GGGAC 4 cut(s) 51, 1082, 1529, 1708
FauNDI CATATG 1 cut(s) 1639
FbaI TGATCA 3 cut(s) 217, 394, 1437
FblI GTMKAC 4 cut(s) 411, 464, 771, 2075
Fnu4HI GCNGC 8 cut(s) 25, 134, 137, 538, 1083, 1291, 1370, 1658
FokI GGATG 6 cut(s) 316, 527, 734, 1073, 1267, 1466
FriOI GRGCYC 2 cut(s) 1269, 1816
Fsp4HI GCNGC 8 cut(s) 25, 134, 137, 538, 1083, 1291, 1370, 1658
FspBI CTAG 5 cut(s) 456, 503, 659, 1500, 1671
GlaI GCGC 2 cut(s) 46, 302
GluI GCNGC 8 cut(s) 25, 134, 137, 538, 1083, 1291, 1370, 1658
GsaI CCCAGC 2 cut(s) 1266, 1811
GsuI CTGGAG 2 cut(s) 1746, 1959
HaeII RGCGCY 1 cut(s) 48
HaeIII GGCC 4 cut(s) 328, 373, 690, 1877
HapII CCGG 2 cut(s) 69, 512
HgaI GACGC 2 cut(s) 30, 2061
HhaI GCGC 2 cut(s) 47, 303
Hin1I GRCGYC 1 cut(s) 45
Hin6I GCGC 2 cut(s) 45, 301
HinP1I GCGC 2 cut(s) 45, 301
HindIII AAGCTT 1 cut(s) 114
HinfI GANTC 6 cut(s) 78, 258, 883, 1196, 1631, 1990
HpaII CCGG 2 cut(s) 69, 512
HphI GGTGA 6 cut(s) 705, 839, 1174, 1228, 1478, 2044
Hpy166II GTNNAC 4 cut(s) 412, 465, 772, 2076
Hpy8I GTNNAC 4 cut(s) 412, 465, 772, 2076
Hpy99I CGWCG 2 cut(s) 21, 24
HpyAV CCTTC 3 cut(s) 23, 1835, 1862
HpyCH4III ACNGT 6 cut(s) 682, 1073, 1193, 1596, 1773, 1934
HpyCH4IV ACGT 1 cut(s) 311
HpyF10VI GCNNNNNNNGC 5 cut(s) 30, 44, 298, 359, 655
HpyF3I CTNAG 4 cut(s) 123, 717, 978, 2018
HpySE526I ACGT 1 cut(s) 311
Hsp92I GRCGYC 1 cut(s) 45
HspAI GCGC 2 cut(s) 45, 301
KasI GGCGCC 1 cut(s) 44
KflI GGGWCCC 1 cut(s) 1516
Ksp22I TGATCA 3 cut(s) 217, 394, 1437
Kzo9I GATC 8 cut(s) 58, 217, 241, 394, 584, 799, 1121, 1437
LmnI GCTCC 5 cut(s) 181, 613, 1045, 1811, 1940
Lsp1109I GCAGC 7 cut(s) 11, 145, 148, 1069, 1277, 1356, 1669
LweI GCATC 4 cut(s) 288, 1277, 1444, 1612
MaeI CTAG 5 cut(s) 456, 503, 659, 1500, 1671
MaeII ACGT 1 cut(s) 311
MaeIII GTNAC 6 cut(s) 249, 529, 1179, 1193, 1402, 1604
MalI GATC 8 cut(s) 60, 219, 243, 396, 586, 801, 1123, 1439
MboI GATC 8 cut(s) 58, 217, 241, 394, 584, 799, 1121, 1437
MflI RGATCY 3 cut(s) 584, 799, 1121
MhlI GDGCHC 2 cut(s) 1269, 1816
MlsI TGGCCA 1 cut(s) 1877
MluCI AATT 8 cut(s) 387, 734, 841, 916, 940, 1009, 1059, 1563
MluNI TGGCCA 1 cut(s) 1877
Mly113I GGCGCC 1 cut(s) 45
MlyI GAGTC 3 cut(s) 252, 877, 1190
MmeI TCCRAC 5 cut(s) 174, 562, 1365, 1615, 1871
Mox20I TGGCCA 1 cut(s) 1877
MroXI GAANNNNTTC 1 cut(s) 1563
MscI TGGCCA 1 cut(s) 1877
MseI TTAA 4 cut(s) 189, 1506, 1695, 2010
MslI CAYNNNNRTG 3 cut(s) 38, 1214, 1285
Msp20I TGGCCA 1 cut(s) 1877
MspCI CTTAAG 1 cut(s) 188
MspI CCGG 2 cut(s) 69, 512
MspR9I CCNGG 5 cut(s) 69, 384, 429, 512, 924
Mva1269I GAATGC 2 cut(s) 105, 1423
MvaI CCWGG 3 cut(s) 384, 429, 924
MvnI CGCG 2 cut(s) 540, 2072
MwoI GCNNNNNNNGC 5 cut(s) 30, 44, 298, 359, 655
NarI GGCGCC 1 cut(s) 45
NciI CCSGG 2 cut(s) 69, 512
NcoI CCATGG 2 cut(s) 39, 1449
NdeI CATATG 1 cut(s) 1639
NdeII GATC 8 cut(s) 58, 217, 241, 394, 584, 799, 1121, 1437
NheI GCTAGC 1 cut(s) 658
NmuCI GTSAC 3 cut(s) 249, 1193, 1604
NspI RCATGY 3 cut(s) 537, 653, 1052
PagI TCATGA 2 cut(s) 478, 1209
PasI CCCWGGG 1 cut(s) 428
PctI GAATGC 2 cut(s) 105, 1423
PdmI GAANNNNTTC 1 cut(s) 1563
PfeI GAWTC 3 cut(s) 78, 1631, 1990
PfoI TCCNGGA 2 cut(s) 382, 510
PkrI GCNGC 8 cut(s) 26, 135, 138, 539, 1084, 1292, 1371, 1659
PleI GAGTC 3 cut(s) 252, 877, 1190
PluTI GGCGCC 1 cut(s) 48
PpsI GAGTC 3 cut(s) 252, 877, 1190
PpuMI RGGWCCY 1 cut(s) 1516
PshAI GACNNNNGTC 1 cut(s) 1074
PshBI ATTAAT 1 cut(s) 1506
PsiI TTATAA 1 cut(s) 1781
Psp5II RGGWCCY 1 cut(s) 1516
Psp6I CCWGG 3 cut(s) 382, 427, 922
PspFI CCCAGC 2 cut(s) 1262, 1807
PspGI CCWGG 3 cut(s) 382, 427, 922
PspPI GGNCC 6 cut(s) 83, 326, 371, 688, 1516, 1844
PspPPI RGGWCCY 1 cut(s) 1516
PstNI CAGNNNCTG 1 cut(s) 1290
PsuI RGATCY 3 cut(s) 584, 799, 1121
RsaI GTAC 1 cut(s) 1036
RsaNI GTAC 1 cut(s) 1035
RseI CAYNNNNRTG 3 cut(s) 38, 1214, 1285
SaqAI TTAA 4 cut(s) 189, 1506, 1695, 2010
SatI GCNGC 8 cut(s) 25, 134, 137, 538, 1083, 1291, 1370, 1658
Sau3AI GATC 8 cut(s) 58, 217, 241, 394, 584, 799, 1121, 1437
Sau96I GGNCC 6 cut(s) 83, 326, 371, 688, 1516, 1844
SchI GAGTC 3 cut(s) 252, 877, 1190
ScrFI CCNGG 5 cut(s) 69, 384, 429, 512, 924
SduI GDGCHC 2 cut(s) 1269, 1816
SfaNI GCATC 4 cut(s) 288, 1277, 1444, 1612
SfcI CTRYAG 3 cut(s) 1257, 1904, 1930
SfoI GGCGCC 1 cut(s) 46
SinI GGWCC 3 cut(s) 83, 1516, 1844
SmiMI CAYNNNNRTG 3 cut(s) 38, 1214, 1285
SmlI CTYRAG 2 cut(s) 188, 1157
SmoI CTYRAG 2 cut(s) 188, 1157
Sse9I AATT 8 cut(s) 387, 734, 841, 916, 940, 1009, 1059, 1563
SsiI CCGC 7 cut(s) 36, 262, 491, 538, 662, 1317, 1756
SspDI GGCGCC 1 cut(s) 44
SspI AATATT 2 cut(s) 276, 697
SspMI CTAG 5 cut(s) 456, 503, 659, 1500, 1671
StyD4I CCNGG 5 cut(s) 67, 382, 427, 510, 922
StyI CCWWGG 4 cut(s) 39, 245, 1449, 1499
TaaI ACNGT 6 cut(s) 682, 1073, 1193, 1596, 1773, 1934
TaiI ACGT 1 cut(s) 314
TaqI TCGA 3 cut(s) 57, 1078, 1689
TasI AATT 8 cut(s) 387, 734, 841, 916, 940, 1009, 1059, 1563
TatI WGTACW 1 cut(s) 1034
TauI GCSGC 1 cut(s) 540
TfiI GAWTC 3 cut(s) 78, 1631, 1990
Tru1I TTAA 4 cut(s) 189, 1506, 1695, 2010
Tru9I TTAA 4 cut(s) 189, 1506, 1695, 2010
TscAI CASTG 5 cut(s) 634, 685, 1198, 1276, 1939
TseFI GTSAC 3 cut(s) 249, 1193, 1604
TseI GCWGC 7 cut(s) 24, 133, 136, 1082, 1290, 1369, 1657
Tsp45I GTSAC 3 cut(s) 249, 1193, 1604
TspGWI ACGGA 2 cut(s) 826, 1104
TspRI CASTG 5 cut(s) 634, 685, 1198, 1276, 1939
Vha464I CTTAAG 1 cut(s) 188
VpaK11BI GGWCC 3 cut(s) 83, 1516, 1844
VspI ATTAAT 1 cut(s) 1506
XapI RAATTY 3 cut(s) 387, 1059, 1563
XbaI TCTAGA 1 cut(s) 502
XceI RCATGY 3 cut(s) 537, 653, 1052
XcmI CCANNNNNNNNNTGG 2 cut(s) 1038, 1870
XmaJI CCTAGG 1 cut(s) 1499
XmiI GTMKAC 4 cut(s) 411, 464, 771, 2075
XmnI GAANNNNTTC 1 cut(s) 1563
XspI CTAG 5 cut(s) 456, 503, 659, 1500, 1671
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.