Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0009569

Physical Location & Seq

Genomic Coordinates Forward (+)

16411173 .. 16416316

Gene Structure 5144 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G154500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3030 bp

ATGGTACACAGTGCCTACGATTCATTCGAGCTCATCAGCGACTGCCCTACGAAGATCGAAGCCATCGAATCATACGGTCCGAAGCTCCTCCTCGGCTGCTCTGATGGATCTCTCAAAATCTACGCTCCGGACTCCTCCAGTTCCGACCGTTCTCCGCCGTCCGATTACCACGCGCACAAGCTGCATCAGGAACCGTACGCACTGGAGAGAAACTTGTCCGGTTTTTCGAAGAAGCCTTTGGTCTCCATGGAGGTCCTGGAATCAAGAGAGCTCCTTCTATCGCTGTCTGAGTCAATAGCGTTTCATGGCCTCCCGAACTTGGGCACCATCGCGGTGATCACAAAGGCGAAGGGCGCCAATGTCTACTCCTGGGATGACCGCAGAGGCTTCTTGTGCTTTGCGAGGCAGAAGCGGGTCTGTATTTTCAGACATGACGGAGGACGAGGATTTGTGGAAGTGAAAGAGTTTGGGGTTCCAGACGTGGTGAAGTCGATGTCGTGGTGCGGTGAAAATATATGTATAGGGATTAGAAGAGAATACATGATACTGAATTCTACTAATGGTGCATTGTCTGAGGTGTTTCCTTCGGGGAGATTGGCACCGCCATTGGTGGTCTCTCTTCCTTCTGGGGAGCTTCTTCTTGGAAAGGATAACATTGGGGTTTTTGTGGACCAAAATGGGAAGCTTCTTCAAGAAGGCAGGGTTTGTTGGTCAGAGGCTCCTAATGTTGTTGTTATTCAGAAGCCATATGCAATAGCTCTCTTACCGAGATATGTTGAGGTTCGATCACTTCGAGCTCCATATCCATTGATACAGACTGTAGTTCTTCGGAATGCTCGTCGTATTCTCCAGAGCAACAATTCTGTAATTGTTGCATTAGAGAATGCTGTTTATGGTCTCTTCCCCGTTCCTCTTGGTGCTCAGATTGTGCAATTAACAGCATCTGGCGATTTTGAGGAAGCGTTGGCATTGTGCAAGCTGCTTCCGCCAGAAGAAGCAAGTCTTAGAGCTGCAAAGGAGGGGTCAATTCACATGAGATATGCTCATCATCTTTTTGATAATGGGGCTTATGAGGACGCCATGGAGCATTTTTTGGCATCTCAAGTAGATATAACCTATGTACTTTCTTTGTATCCATCTATTGTTCTTCCTAAGACAACTATGGTTTTGGAGCCAGAGAAGCTGATGGATATTTCTGGGGATTCCTCATATCTCTCAAGAGGTTCATCTGGTATATCAGATGATATGGAACCCTCTACCCCTTTTCATCTACTGGAATCTGAAGAGAGTGCAGCATTAGAGTCCAAGAAAATGAGCCATAACACTCTCATGGCTCTGATAAAGTTCTTACAGAAAAAAAGATACAGCATAATTGAAAAGGCTACTGCTGAGGGGACAGAAGAGGTTGTTTTAGATGCAGTAGGAAACAACTTTGCATCCTATGAGTCTAATAATAGGTTTAAGAAATTGAACAAGGGGCGGGGCAGCATCCCAGTTACCTCTGGTGCTAGGGAGATGGCTGCGATACTGGATACAGCACTACTCCAAGCTCTACTTCTTACTGGACAGGCTTCGGCGGCTTTAGAATTACTGAAAGGTCTTAACTACTGTGATGTAAAAATATGCGAGGATATTCTCCAGAAAAACAATCACCACGCTGCCTTGTTAGAACTCTACAGGTGCAATTCAATGCACCATGAAGCTCTAAAACTTTTGCATCAATTAGTAGAAGACTCAAAATCTAACCAAGTGCAAACTGAATTGATCCAGAAGTTAAAGCCTGAGTCAATTGTTGAATATCTCAAGCCTCTTTGTGGGACTGATCCCATGCTTGTCCTGGAGTATTCAATGCTTGTTCTGGAAAGTTGTCCAACACAGACAATTGAGCTCTTTTTGAATGGAAATATTCCAGCAGACCTGGTGAACTCTTATTTGAAGCAGCATGCTCCCAACATGCAGGCCACGTACTTGGAGCTTATGCTTGCAATGGATGAAAATGGGATCTCTGGAAATCTGCAAAATGAAATGGTACATATCTATCTATCAGAAGTTCTTGATTGGCATGCTGATTTAAGTGCTCAGCAGAAATGGGATGAGCAAACTTACTCCTCAACGAGAAAAAAATTATTGTCTGCTTTAGAGAGTATTTCAGGATATAACCCAGAGGCTTTGTTGAGACGTCTTCCAACAGATGCTTTATATGAAGAGCGTGCAATTTTGTTGGGAAAAATGAACCAACATGAGCTTGCCTTATCTCTATATGTTCATAAGCTTCATGTTCCTGAGCTGGCACTGTCCTTTTGTGATCGAGTGTATGAGTCATTGGTTCATCAGCAATCTTCAAGATCTTCTGGCAATATATACCTCACTCTATTGCAAATTTATCTTAATCCGAGGAGAACAACCAAGAACTTTGAGAAGCGAATTACAAATTTAGTATCACCTCAGAATATCGGTACACCAAAGGTTGGTTCTGCAAGTACAGTTAAAAGTAAAGGAGGTCGTGGAAATAAGAAAATTGCTGCAATAGAGGTGGCAGATGAAATAAGAGTCGGTCAAAGTAGCACTGAAAGTAGCAGGAGTGATGGAGATGCAGACGAATCTAGTGAGGAAGGAGGTTCAACAATCATGCTTGATGAGGTCCTGGATTTGTTAAGCCGAAAGTGGGACAGAATAAATGGAGCTCAGGCCCTCAAACTTTTGCCAAGGGAAACTAAGCTACAGAATTTGCTTCCATTTATGGGACCGCTGTTGAGAAAATCCAGTGAAGCATACAGGAACCTTTCAGTGATCAAGAGTTTGAGACAAAGTGAGAACCTACAGGTTAAGGATGAACTCTATGAACAAAGGAAAGGGGTGGTGAAGATCACCAGTGATAGCATGTGCTCCCTTTGCCGGAAGAAAATAGGAACAAGTGTCTTTGCAGTGTATCCGAACGGAAAAACAATAGTACATTTTGTCTGCTTCAGAGACTCACAAAGCATGAAAACCGTGGGCAGAGGGTCGCCTTCGCCGCTAAGGAAGCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0000325 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005765 GO:0005768 GO:0005770 GO:0005773 GO:0005774 GO:0005911 GO:0006810 GO:0006906 GO:0006914 GO:0006996 GO:0007033 GO:0007034 GO:0007041 GO:0008150 GO:0008152 GO:0008333 GO:0009056 GO:0009506 GO:0009705 GO:0009987 GO:0010008 GO:0012505 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016197 GO:0030054 GO:0030897 GO:0031090 GO:0031410 GO:0031902 GO:0031982 GO:0032991 GO:0034058 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044437 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0048284 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055044 GO:0061024 GO:0061025 GO:0061919 GO:0071840 GO:0090174 GO:0097708 GO:0098588 GO:0098796 GO:0098805 GO:0098852 GO:0098876 GO:0099023 GO:1902774 GO:1990126

KEGG Pathways

Metabolic & Signaling

ko04138 map04138

Pfam Domains

Protein Families

CNH Clathrin Vps39_1 Vps39_2

Protein Analysis

1010

Amino Acids

112.04

Weight (kDa)

6.45

Isoelectric Point (pI)

46.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009569)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36630 AT4G36630
fragaria_vesca	FvH4_1g13311
malus_domestica	MD02G1147600.v1.1 MD15G1261900.v1.1
prunus_persica	Prupe.7G154500_v2.0.a1
pyrus_communis	pycom02g11660 pycom15g22910
rosa_chinensis	RchiOBHm_Chr2g0101111 RchiOBHm_Chr2g0101581
rosa_laevigata	RLG00000017092
rosa_multiflora	Rmu_sc0006153.1_g000006 Rmu_sc0019613.1_g000003
rosa_roxburghii	Rroxscaffold_2G00141170
rosa_rugosa	Rorug02G0097300 Rorug02G0100900
rosa_samantha	Rh2AG148200 Rh2BG153600 Rh2CG149800 Rh2CG153900 Rh2DG153900
rosa_wichuraiana	Rw2G011560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2182
AccB1I	GGYRCC	3 cut(s)	323, 353, 598
AccB7I	CCANNNNNTGG	1 cut(s)	2468
AccI	GTMKAC	1 cut(s)	363
AccII	CGCG	2 cut(s)	173, 332
AccIII	TCCGGA	1 cut(s)	127
AclWI	GGATC	4 cut(s)	115, 1759, 1817, 2009
AcsI	RAATTY	4 cut(s)	550, 2379, 2431, 2725
AcuI	CTGAAG	2 cut(s)	1302, 2950
AcyI	GRCGYC	3 cut(s)	354, 1077, 2179
AfaI	GTAC	8 cut(s)	6, 197, 1122, 1967, 2031, 2458, 2482, 2952
AfiI	CCNNNNNNNGG	7 cut(s)	319, 320, 1814, 2468, 2665, 2741, 2895
AjiI	CACGTC	1 cut(s)	481
AjnI	CCWGG	5 cut(s)	255, 368, 1836, 1917, 2643
AjuI	GAANNNNNNNTTGG	6 cut(s)	221, 253, 1539, 1571, 2455, 2487
Alw21I	GWGCWC	8 cut(s)	33, 273, 799, 922, 1890, 2080, 2686, 2888
Alw26I	GTCTC	6 cut(s)	247, 619, 902, 2170, 2797, 2964
AlwI	GGATC	4 cut(s)	115, 1759, 1817, 2009
AlwNI	CAGNNNCTG	2 cut(s)	42, 944
Aor13HI	TCCGGA	1 cut(s)	127
AoxI	GGCC	3 cut(s)	307, 1959, 2688
ApoI	RAATTY	4 cut(s)	550, 2379, 2431, 2725
ArsI	GACNNNNNNTTYG	2 cut(s)	1007, 1039
AspLEI	GCGC	2 cut(s)	175, 356
AspS9I	GGNCC	6 cut(s)	77, 253, 670, 2641, 2689, 2744
AsuHPI	GGTGA	8 cut(s)	346, 496, 518, 1643, 1933, 2433, 2860, 2872
AsuII	TTCGAA	1 cut(s)	227
AvaII	GGWCC	5 cut(s)	77, 253, 670, 2641, 2744
BaeGI	GKGCMC	1 cut(s)	326
BanI	GGYRCC	3 cut(s)	323, 353, 598
BanII	GRGCYC	5 cut(s)	33, 273, 799, 1890, 2686
BbsI	GAAGAC	2 cut(s)	1737, 2174
Bbv12I	GWGCWC	8 cut(s)	33, 273, 799, 922, 1890, 2080, 2686, 2888
BbvCI	CCTCAGC	1 cut(s)	1389
BccI	CCATC	7 cut(s)	71, 98, 335, 1144, 1180, 1510, 2579
BceAI	ACGGC	1 cut(s)	142
BciT130I	CCWGG	5 cut(s)	257, 370, 1838, 1919, 2645
BciVI	GTATCC	3 cut(s)	1143, 1525, 2940
BclI	TGATCA	2 cut(s)	336, 2790
BcoDI	GTCTC	6 cut(s)	247, 619, 902, 2170, 2797, 2964
BfaI	CTAG	2 cut(s)	1509, 2604
BfmI	CTRYAG	4 cut(s)	819, 1675, 2720, 2819
BfoI	RGCGCY	1 cut(s)	357
BfuI	GTATCC	3 cut(s)	1143, 1525, 2940
BglII	AGATCT	1 cut(s)	2345
BlpI	GCTNAGC	1 cut(s)	2079
Bme1390I	CCNGG	5 cut(s)	257, 370, 1838, 1919, 2645
Bme18I	GGWCC	5 cut(s)	77, 253, 670, 2641, 2744
BmgBI	CACGTC	1 cut(s)	481
BmgT120I	GGNCC	6 cut(s)	77, 253, 670, 2641, 2689, 2744
BmrFI	CCNGG	5 cut(s)	257, 370, 1838, 1919, 2645
BmrI	ACTGGG	1 cut(s)	1487
BmsI	GCATC	9 cut(s)	193, 950, 1106, 1405, 1445, 1497, 1726, 2182, 2581
BmuI	ACTGGG	1 cut(s)	1487
BpiI	GAAGAC	2 cut(s)	1737, 2174
BplI	GAGNNNNNCTC	2 cut(s)	1027, 1059
BpmI	CTGGAG	5 cut(s)	121, 224, 833, 1622, 1859
Bpu10I	CCTNAGC	4 cut(s)	1389, 2283, 2685, 3017
Bpu1102I	GCTNAGC	1 cut(s)	2079
Bpu14I	TTCGAA	1 cut(s)	227
BpuEI	CTTGAG	3 cut(s)	1086, 1201, 1787
BsaAI	YACGTR	1 cut(s)	1965
BsaHI	GRCGYC	3 cut(s)	354, 1077, 2179
BsaI	GGTCTC	3 cut(s)	247, 619, 902
BsaJI	CCNNGG	7 cut(s)	91, 246, 369, 1080, 2393, 2705, 2991
BsaWI	WCCGGW	2 cut(s)	127, 218
Bsc4I	CCNNNNNNNGG	7 cut(s)	319, 320, 1814, 2468, 2665, 2741, 2895
Bse1I	ACTGG	8 cut(s)	138, 207, 1278, 1493, 1533, 1567, 2763, 2871
Bse3DI	GCAATG	1 cut(s)	1992
BseAI	TCCGGA	1 cut(s)	127
BseBI	CCWGG	5 cut(s)	257, 370, 1838, 1919, 2645
BseDI	CCNNGG	7 cut(s)	91, 246, 369, 1080, 2393, 2705, 2991
BseGI	GGATG	6 cut(s)	379, 1436, 1488, 1996, 2098, 2836
BseLI	CCNNNNNNNGG	7 cut(s)	319, 320, 1814, 2468, 2665, 2741, 2895
BseMI	GCAATG	1 cut(s)	1992
BseMII	CTCAG	9 cut(s)	279, 564, 935, 1380, 1773, 2093, 2274, 2459, 2699
BseNI	ACTGG	8 cut(s)	138, 207, 1278, 1493, 1533, 1567, 2763, 2871
BseRI	GAGGAG	5 cut(s)	77, 80, 124, 2098, 2410
BseSI	GKGCMC	1 cut(s)	326
BsgI	GTGCAG	1 cut(s)	1311
Bsh1236I	CGCG	2 cut(s)	173, 332
Bsh1285I	CGRYCG	1 cut(s)	148
BshFI	GGCC	3 cut(s)	309, 1961, 2690
BshNI	GGYRCC	3 cut(s)	323, 353, 598
BsiEI	CGRYCG	1 cut(s)	148
BsiHKAI	GWGCWC	8 cut(s)	33, 273, 799, 922, 1890, 2080, 2686, 2888
BsiSI	CCGG	3 cut(s)	128, 219, 2896
BsiWI	CGTACG	1 cut(s)	195
BslFI	GGGAC	4 cut(s)	1408, 1831, 2681, 2757
BslI	CCNNNNNNNGG	7 cut(s)	319, 320, 1814, 2468, 2665, 2741, 2895
BsmAI	GTCTC	6 cut(s)	247, 619, 902, 2170, 2797, 2964
BsmBI	CGTCTC	1 cut(s)	2170
BsmFI	GGGAC	4 cut(s)	1408, 1831, 2681, 2757
BsmI	GAATGC	2 cut(s)	838, 889
BsnI	GGCC	3 cut(s)	309, 1961, 2690
Bso31I	GGTCTC	3 cut(s)	247, 619, 902
Bsp119I	TTCGAA	1 cut(s)	227
Bsp1286I	GDGCHC	9 cut(s)	33, 273, 326, 799, 922, 1890, 2080, 2686, 2888
Bsp13I	TCCGGA	1 cut(s)	127
Bsp1720I	GCTNAGC	1 cut(s)	2079
Bsp19I	CCATGG	2 cut(s)	246, 1080
BspANI	GGCC	3 cut(s)	309, 1961, 2690
BspCNI	CTCAG	9 cut(s)	280, 565, 934, 1381, 1774, 2092, 2275, 2458, 2698
BspEI	TCCGGA	1 cut(s)	127
BspFNI	CGCG	2 cut(s)	173, 332
BspPI	GGATC	4 cut(s)	115, 1759, 1817, 2009
BspQI	GCTCTTC	1 cut(s)	2199
BspT104I	TTCGAA	1 cut(s)	227
BspT107I	GGYRCC	3 cut(s)	323, 353, 598
BspTNI	GGTCTC	3 cut(s)	247, 619, 902
BsrDI	GCAATG	1 cut(s)	1992
BsrI	ACTGG	8 cut(s)	138, 207, 1278, 1493, 1533, 1567, 2763, 2871
BssECI	CCNNGG	7 cut(s)	91, 246, 369, 1080, 2393, 2705, 2991
BssNI	GRCGYC	3 cut(s)	354, 1077, 2179
BssT1I	CCWWGG	3 cut(s)	246, 1080, 2705
Bst2UI	CCWGG	5 cut(s)	257, 370, 1838, 1919, 2645
Bst4CI	ACNGT	9 cut(s)	11, 77, 149, 195, 820, 1610, 2295, 2485, 2992
Bst6I	CTCTTC	6 cut(s)	526, 624, 905, 1278, 1395, 2199
BstACI	GRCGYC	3 cut(s)	354, 1077, 2179
BstAPI	GCANNNNNTGC	1 cut(s)	181
BstBAI	YACGTR	1 cut(s)	1965
BstBI	TTCGAA	1 cut(s)	227
BstC8I	GCNNGC	8 cut(s)	977, 1944, 1959, 1983, 2064, 2211, 2247, 2289
BstDSI	CCRYGG	3 cut(s)	246, 1080, 2991
BstF5I	GGATG	6 cut(s)	379, 1436, 1488, 1996, 2098, 2836
BstFNI	CGCG	2 cut(s)	173, 332
BstH2I	RGCGCY	1 cut(s)	357
BstHHI	GCGC	2 cut(s)	175, 356
BstMAI	GTCTC	6 cut(s)	247, 619, 902, 2170, 2797, 2964
BstMCI	CGRYCG	1 cut(s)	148
BstMWI	GCNNNNNNNGC	9 cut(s)	181, 353, 393, 985, 1180, 1577, 2892, 3013, 3022
BstNI	CCWGG	5 cut(s)	257, 370, 1838, 1919, 2645
BstNSI	RCATGY	4 cut(s)	1946, 1957, 2066, 2884
BstSCI	CCNGG	5 cut(s)	255, 368, 1836, 1917, 2643
BstSFI	CTRYAG	4 cut(s)	819, 1675, 2720, 2819
BstSLI	GKGCMC	1 cut(s)	326
BstUI	CGCG	2 cut(s)	173, 332
BstV2I	GAAGAC	2 cut(s)	1737, 2174
BstX2I	RGATCY	3 cut(s)	107, 2001, 2345
BstXI	CCANNNNNNTGG	1 cut(s)	1969
BstYI	RGATCY	3 cut(s)	107, 2001, 2345
BsuI	GTATCC	3 cut(s)	1143, 1525, 2940
BsuRI	GGCC	3 cut(s)	309, 1961, 2690
BtgI	CCRYGG	3 cut(s)	246, 1080, 2991
BtgZI	GCGATG	1 cut(s)	313
BtrI	CACGTC	1 cut(s)	481
BtsCI	GGATG	6 cut(s)	379, 1436, 1488, 1996, 2098, 2836
BtsI	GCAGTG	1 cut(s)	2931
BtsIMutI	CAGTG	8 cut(s)	16, 200, 2291, 2565, 2770, 2793, 2878, 2931
Cac8I	GCNNGC	8 cut(s)	977, 1944, 1959, 1983, 2064, 2211, 2247, 2289
CaiI	CAGNNNCTG	2 cut(s)	42, 944
CfoI	GCGC	2 cut(s)	175, 356
Cfr13I	GGNCC	6 cut(s)	77, 253, 670, 2641, 2689, 2744
CpoI	CGGWCCG	1 cut(s)	77
CseI	GACGC	1 cut(s)	1085
CsiI	ACCWGGT	1 cut(s)	1917
Csp6I	GTAC	8 cut(s)	5, 196, 1121, 1966, 2030, 2457, 2481, 2951
CspCI	CAANNNNNGTGG	2 cut(s)	2514, 2549
CspI	CGGWCCG	1 cut(s)	77
CviQI	GTAC	8 cut(s)	5, 196, 1121, 1966, 2030, 2457, 2481, 2951
DinI	GGCGCC	1 cut(s)	355
Eam1104I	CTCTTC	6 cut(s)	526, 624, 905, 1278, 1395, 2199
EarI	CTCTTC	6 cut(s)	526, 624, 905, 1278, 1395, 2199
EciI	GGCGGA	2 cut(s)	144, 975
Ecl136II	GAGCTC	5 cut(s)	31, 271, 797, 1888, 2684
Eco130I	CCWWGG	3 cut(s)	246, 1080, 2705
Eco24I	GRGCYC	5 cut(s)	33, 273, 799, 1890, 2686
Eco31I	GGTCTC	3 cut(s)	247, 619, 902
Eco47I	GGWCC	5 cut(s)	77, 253, 670, 2641, 2744
Eco53kI	GAGCTC	5 cut(s)	31, 271, 797, 1888, 2684
Eco57I	CTGAAG	2 cut(s)	1302, 2950
EcoICRI	GAGCTC	5 cut(s)	31, 271, 797, 1888, 2684
EcoO109I	RGGNCCY	3 cut(s)	253, 2641, 2689
EcoRI	GAATTC	1 cut(s)	550
EcoRII	CCWGG	5 cut(s)	255, 368, 1836, 1917, 2643
EcoT14I	CCWWGG	3 cut(s)	246, 1080, 2705
EcoT38I	GRGCYC	5 cut(s)	33, 273, 799, 1890, 2686
EgeI	GGCGCC	1 cut(s)	355
EheI	GGCGCC	1 cut(s)	355
ErhI	CCWWGG	3 cut(s)	246, 1080, 2705
Esp3I	CGTCTC	1 cut(s)	2170
FalI	AAGNNNNNCTT	4 cut(s)	987, 1019, 1539, 1571
FaqI	GGGAC	4 cut(s)	1408, 1831, 2681, 2757
FauI	CCCGC	2 cut(s)	405, 1473
FauNDI	CATATG	1 cut(s)	748
FbaI	TGATCA	2 cut(s)	336, 2790
FblI	GTMKAC	1 cut(s)	363
FokI	GGATG	6 cut(s)	386, 1423, 1475, 2003, 2105, 2843
FriOI	GRGCYC	5 cut(s)	33, 273, 799, 1890, 2686
FspBI	CTAG	2 cut(s)	1509, 2604
GlaI	GCGC	2 cut(s)	174, 355
GsuI	CTGGAG	5 cut(s)	121, 224, 833, 1622, 1859
HaeII	RGCGCY	1 cut(s)	357
HaeIII	GGCC	3 cut(s)	309, 1961, 2690
HapII	CCGG	3 cut(s)	128, 219, 2896
HgaI	GACGC	1 cut(s)	1085
HhaI	GCGC	2 cut(s)	175, 356
Hin1I	GRCGYC	3 cut(s)	354, 1077, 2179
Hin6I	GCGC	2 cut(s)	173, 354
HinP1I	GCGC	2 cut(s)	173, 354
HindIII	AAGCTT	2 cut(s)	683, 2270
HpaII	CCGG	3 cut(s)	128, 219, 2896
HphI	GGTGA	8 cut(s)	346, 496, 518, 1643, 1933, 2433, 2860, 2872
Hpy166II	GTNNAC	5 cut(s)	7, 364, 670, 1924, 2459
Hpy8I	GTNNAC	5 cut(s)	7, 364, 670, 1924, 2459
Hpy99I	CGWCG	1 cut(s)	843
HpyAV	CCTTC	7 cut(s)	284, 343, 594, 633, 689, 2606, 3018
HpyCH4III	ACNGT	9 cut(s)	11, 77, 149, 195, 820, 1610, 2295, 2485, 2992
HpyCH4IV	ACGT	3 cut(s)	480, 1964, 2179
HpyF10VI	GCNNNNNNNGC	9 cut(s)	181, 353, 393, 985, 1180, 1577, 2892, 3013, 3022
HpySE526I	ACGT	3 cut(s)	480, 1964, 2179
Hsp92I	GRCGYC	3 cut(s)	354, 1077, 2179
HspAI	GCGC	2 cut(s)	173, 354
KasI	GGCGCC	1 cut(s)	353
Kpn2I	TCCGGA	1 cut(s)	127
Ksp22I	TGATCA	2 cut(s)	336, 2790
LguI	GCTCTTC	1 cut(s)	2199
LweI	GCATC	9 cut(s)	193, 950, 1106, 1405, 1445, 1497, 1726, 2182, 2581
MabI	ACCWGGT	1 cut(s)	1917
MaeI	CTAG	2 cut(s)	1509, 2604
MaeII	ACGT	3 cut(s)	480, 1964, 2179
MaeIII	GTNAC	1 cut(s)	1495
MfeI	CAATTG	2 cut(s)	1788, 1881
MflI	RGATCY	3 cut(s)	107, 2001, 2345
MhlI	GDGCHC	9 cut(s)	33, 273, 326, 799, 922, 1890, 2080, 2686, 2888
Mly113I	GGCGCC	1 cut(s)	354
MlyI	GAGTC	9 cut(s)	125, 299, 1310, 1454, 1727, 1793, 2327, 2559, 2966
MmeI	TCCRAC	3 cut(s)	168, 1895, 2210
MroI	TCCGGA	1 cut(s)	127
MseI	TTAA	9 cut(s)	935, 1461, 1602, 1775, 2072, 2388, 2487, 2654, 2826
MslI	CAYNNNNRTG	2 cut(s)	332, 1328
MspA1I	CMGCKG	1 cut(s)	2749
MspI	CCGG	3 cut(s)	128, 219, 2896
MspR9I	CCNGG	5 cut(s)	257, 370, 1838, 1919, 2645
MunI	CAATTG	2 cut(s)	1788, 1881
Mva1269I	GAATGC	2 cut(s)	838, 889
MvaI	CCWGG	5 cut(s)	257, 370, 1838, 1919, 2645
MvnI	CGCG	2 cut(s)	173, 332
MwoI	GCNNNNNNNGC	9 cut(s)	181, 353, 393, 985, 1180, 1577, 2892, 3013, 3022
NarI	GGCGCC	1 cut(s)	354
NcoI	CCATGG	2 cut(s)	246, 1080
NdeI	CATATG	1 cut(s)	748
NmeAIII	GCCGAG	1 cut(s)	72
NspI	RCATGY	4 cut(s)	1946, 1957, 2066, 2884
NspV	TTCGAA	1 cut(s)	227
PaeI	GCATGC	2 cut(s)	1946, 2066
PciSI	GCTCTTC	1 cut(s)	2199
PcsI	WCGNNNNNNNCGW	4 cut(s)	24, 63, 790, 835
PctI	GAATGC	2 cut(s)	838, 889
PfeI	GAWTC	6 cut(s)	20, 68, 260, 1202, 1277, 2600
Pfl23II	CGTACG	1 cut(s)	195
PflMI	CCANNNNNTGG	1 cut(s)	2468
PfoI	TCCNGGA	3 cut(s)	255, 1836, 2643
PleI	GAGTC	9 cut(s)	125, 298, 1309, 1453, 1727, 1792, 2326, 2558, 2966
PluTI	GGCGCC	1 cut(s)	357
PpsI	GAGTC	9 cut(s)	125, 298, 1309, 1453, 1727, 1792, 2326, 2558, 2966
Ppu21I	YACGTR	1 cut(s)	1965
PpuMI	RGGWCCY	2 cut(s)	253, 2641
Psp124BI	GAGCTC	5 cut(s)	33, 273, 799, 1890, 2686
Psp5II	RGGWCCY	2 cut(s)	253, 2641
Psp6I	CCWGG	5 cut(s)	255, 368, 1836, 1917, 2643
PspGI	CCWGG	5 cut(s)	255, 368, 1836, 1917, 2643
PspLI	CGTACG	1 cut(s)	195
PspPI	GGNCC	6 cut(s)	77, 253, 670, 2641, 2689, 2744
PspPPI	RGGWCCY	2 cut(s)	253, 2641
PstNI	CAGNNNCTG	2 cut(s)	42, 944
PsuI	RGATCY	3 cut(s)	107, 2001, 2345
RsaI	GTAC	8 cut(s)	6, 197, 1122, 1967, 2031, 2458, 2482, 2952
RsaNI	GTAC	8 cut(s)	5, 196, 1121, 1966, 2030, 2457, 2481, 2951
RseI	CAYNNNNRTG	2 cut(s)	332, 1328
Rsr2I	CGGWCCG	1 cut(s)	77
RsrII	CGGWCCG	1 cut(s)	77
SacI	GAGCTC	5 cut(s)	33, 273, 799, 1890, 2686
SapI	GCTCTTC	1 cut(s)	2199
SaqAI	TTAA	9 cut(s)	935, 1461, 1602, 1775, 2072, 2388, 2487, 2654, 2826
Sau96I	GGNCC	6 cut(s)	77, 253, 670, 2641, 2689, 2744
SchI	GAGTC	9 cut(s)	125, 299, 1310, 1454, 1727, 1793, 2327, 2559, 2966
ScrFI	CCNGG	5 cut(s)	257, 370, 1838, 1919, 2645
SduI	GDGCHC	9 cut(s)	33, 273, 326, 799, 922, 1890, 2080, 2686, 2888
SexAI	ACCWGGT	1 cut(s)	1917
SfaNI	GCATC	9 cut(s)	193, 950, 1106, 1405, 1445, 1497, 1726, 2182, 2581
SfcI	CTRYAG	4 cut(s)	819, 1675, 2720, 2819
SfoI	GGCGCC	1 cut(s)	355
SfuI	TTCGAA	1 cut(s)	227
SinI	GGWCC	5 cut(s)	77, 253, 670, 2641, 2744
SmiMI	CAYNNNNRTG	2 cut(s)	332, 1328
SmlI	CTYRAG	3 cut(s)	1101, 1216, 1802
SmoI	CTYRAG	3 cut(s)	1101, 1216, 1802
SphI	GCATGC	2 cut(s)	1946, 2066
SspDI	GGCGCC	1 cut(s)	353
SspI	AATATT	1 cut(s)	1906
SspMI	CTAG	2 cut(s)	1509, 2604
SstI	GAGCTC	5 cut(s)	33, 273, 799, 1890, 2686
StyD4I	CCNGG	5 cut(s)	255, 368, 1836, 1917, 2643
StyI	CCWWGG	3 cut(s)	246, 1080, 2705
TaaI	ACNGT	9 cut(s)	11, 77, 149, 195, 820, 1610, 2295, 2485, 2992
TaiI	ACGT	3 cut(s)	483, 1967, 2182
TaqI	TCGA	8 cut(s)	27, 57, 66, 227, 491, 784, 793, 2308
TaqII	GACCGA	1 cut(s)	2543
TatI	WGTACW	3 cut(s)	1120, 2480, 2950
TauI	GCSGC	2 cut(s)	1580, 3016
TfiI	GAWTC	6 cut(s)	20, 68, 260, 1202, 1277, 2600
Tru1I	TTAA	9 cut(s)	935, 1461, 1602, 1775, 2072, 2388, 2487, 2654, 2826
Tru9I	TTAA	9 cut(s)	935, 1461, 1602, 1775, 2072, 2388, 2487, 2654, 2826
TscAI	CASTG	8 cut(s)	16, 207, 2298, 2572, 2770, 2793, 2878, 2931
TspGWI	ACGGA	2 cut(s)	450, 2952
TspRI	CASTG	8 cut(s)	16, 207, 2298, 2572, 2770, 2793, 2878, 2931
Van91I	CCANNNNNTGG	1 cut(s)	2468
VpaK11BI	GGWCC	5 cut(s)	77, 253, 670, 2641, 2744
XapI	RAATTY	4 cut(s)	550, 2379, 2431, 2725
XceI	RCATGY	4 cut(s)	1946, 1957, 2066, 2884
XcmI	CCANNNNNNNNNTGG	2 cut(s)	253, 1834
XmiI	GTMKAC	1 cut(s)	363
XspI	CTAG	2 cut(s)	1509, 2604
ZraI	GACGTC	1 cut(s)	2180

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.