Replication factor C subunit
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g12990 |
| malus_domestica | MD02G1144400.v1.1 MD15G1258100.v1.1 |
| prunus_persica | Prupe.7G157200_v2.0.a1 |
| pyrus_communis | pycom15g22580 |
| rosa_chinensis | RchiOBHm_Chr2g0101071 |
| rosa_laevigata | RLG00000017049 |
| rosa_multiflora | Rmu_sc0007698.1_g000014 |
| rosa_roxburghii | Rroxscaffold_2G00141580 |
| rosa_rugosa | Rorug02G0096900 |
| rosa_samantha | Rh2AG142900 Rh2BG148000 Rh2CG149500 Rh2DG148500 |
| rosa_wichuraiana | Rw2G011260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 3 cut(s) | 725, 809, 1558 |
| AciI | CCGC | 5 cut(s) | 114, 347, 1071, 1335, 2097 |
| AclWI | GGATC | 2 cut(s) | 2058, 2108 |
| AcoI | YGGCCR | 1 cut(s) | 2328 |
| AcsI | RAATTY | 4 cut(s) | 334, 1160, 1377, 2321 |
| AcuI | CTGAAG | 3 cut(s) | 1698, 2219, 2240 |
| AfaI | GTAC | 4 cut(s) | 920, 1096, 1255, 1602 |
| AflIII | ACRYGT | 1 cut(s) | 403 |
| AgeI | ACCGGT | 1 cut(s) | 1854 |
| AjnI | CCWGG | 3 cut(s) | 832, 945, 1527 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1545, 1577 |
| Alw21I | GWGCWC | 3 cut(s) | 863, 1582, 1596 |
| Alw26I | GTCTC | 3 cut(s) | 77, 945, 1307 |
| Alw44I | GTGCAC | 1 cut(s) | 859 |
| AlwI | GGATC | 2 cut(s) | 2058, 2108 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2218 |
| AoxI | GGCC | 3 cut(s) | 235, 692, 2328 |
| ApaLI | GTGCAC | 1 cut(s) | 859 |
| ApeKI | GCWGC | 7 cut(s) | 288, 959, 1113, 1268, 1742, 1829, 2083 |
| ApoI | RAATTY | 4 cut(s) | 334, 1160, 1377, 2321 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 770, 802 |
| AseI | ATTAAT | 2 cut(s) | 129, 1631 |
| AsiGI | ACCGGT | 1 cut(s) | 1854 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1349 |
| AspLEI | GCGC | 1 cut(s) | 396 |
| AspS9I | GGNCC | 3 cut(s) | 236, 1137, 1430 |
| AsuC2I | CCSGG | 1 cut(s) | 2144 |
| AsuII | TTCGAA | 1 cut(s) | 274 |
| AvaII | GGWCC | 2 cut(s) | 1137, 1430 |
| BaeGI | GKGCMC | 1 cut(s) | 863 |
| BalI | TGGCCA | 1 cut(s) | 2330 |
| BanII | GRGCYC | 5 cut(s) | 269, 377, 473, 917, 1596 |
| BauI | CACGAG | 1 cut(s) | 2204 |
| BbsI | GAAGAC | 3 cut(s) | 207, 406, 1938 |
| Bbv12I | GWGCWC | 3 cut(s) | 863, 1582, 1596 |
| BbvI | GCAGC | 7 cut(s) | 300, 946, 1125, 1255, 1754, 1841, 2070 |
| BccI | CCATC | 8 cut(s) | 227, 314, 664, 727, 1033, 1441, 2064, 2125 |
| BceAI | ACGGC | 3 cut(s) | 55, 1058, 1161 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1185, 1219 |
| BciT130I | CCWGG | 3 cut(s) | 834, 947, 1529 |
| BcnI | CCSGG | 1 cut(s) | 2144 |
| BcoDI | GTCTC | 3 cut(s) | 77, 945, 1307 |
| BfaI | CTAG | 5 cut(s) | 765, 852, 1620, 2108, 2315 |
| BfmI | CTRYAG | 2 cut(s) | 258, 529 |
| BisI | GCNGC | 9 cut(s) | 115, 289, 960, 1114, 1269, 1743, 1830, 2084, 2097 |
| BlpI | GCTNAGC | 1 cut(s) | 1100 |
| BlsI | GCNGC | 9 cut(s) | 116, 290, 961, 1115, 1270, 1744, 1831, 2085, 2098 |
| Bme1390I | CCNGG | 4 cut(s) | 834, 947, 1529, 2144 |
| Bme18I | GGWCC | 2 cut(s) | 1137, 1430 |
| BmgT120I | GGNCC | 3 cut(s) | 236, 1137, 1430 |
| BmiI | GGNNCC | 3 cut(s) | 942, 1138, 1563 |
| BmrFI | CCNGG | 4 cut(s) | 834, 947, 1529, 2144 |
| BmsI | GCATC | 6 cut(s) | 67, 499, 1117, 1816, 1867, 2188 |
| BpiI | GAAGAC | 3 cut(s) | 207, 406, 1938 |
| BpmI | CTGGAG | 2 cut(s) | 24, 786 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1245 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1100 |
| Bpu14I | TTCGAA | 1 cut(s) | 274 |
| BpuEI | CTTGAG | 2 cut(s) | 1367, 2011 |
| BpuMI | CCSGG | 1 cut(s) | 2144 |
| BsaJI | CCNNGG | 6 cut(s) | 104, 945, 946, 1698, 2065, 2143 |
| BsaWI | WCCGGW | 2 cut(s) | 1854, 2349 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 535, 565 |
| Bse118I | RCCGGY | 1 cut(s) | 1854 |
| Bse1I | ACTGG | 5 cut(s) | 41, 695, 803, 1432, 1575 |
| Bse3DI | GCAATG | 1 cut(s) | 872 |
| BseBI | CCWGG | 3 cut(s) | 834, 947, 1529 |
| BseDI | CCNNGG | 6 cut(s) | 104, 945, 946, 1698, 2065, 2143 |
| BseGI | GGATG | 7 cut(s) | 322, 719, 1025, 1571, 2075, 2139, 2179 |
| BseMI | GCAATG | 1 cut(s) | 872 |
| BseMII | CTCAG | 8 cut(s) | 72, 381, 414, 695, 831, 1236, 1318, 1803 |
| BseNI | ACTGG | 5 cut(s) | 41, 695, 803, 1432, 1575 |
| BseRI | GAGGAG | 5 cut(s) | 70, 444, 527, 1135, 1401 |
| BseSI | GKGCMC | 1 cut(s) | 863 |
| BseXI | GCAGC | 7 cut(s) | 300, 946, 1125, 1255, 1754, 1841, 2070 |
| BseYI | CCCAGC | 1 cut(s) | 2287 |
| BshFI | GGCC | 3 cut(s) | 237, 694, 2330 |
| BshTI | ACCGGT | 1 cut(s) | 1854 |
| BsiHKAI | GWGCWC | 3 cut(s) | 863, 1582, 1596 |
| BsiSI | CCGG | 3 cut(s) | 1855, 2143, 2350 |
| BslFI | GGGAC | 5 cut(s) | 166, 909, 1033, 1150, 2238 |
| BsmAI | GTCTC | 3 cut(s) | 77, 945, 1307 |
| BsmFI | GGGAC | 5 cut(s) | 166, 909, 1033, 1150, 2238 |
| BsmI | GAATGC | 2 cut(s) | 1271, 1669 |
| BsnI | GGCC | 3 cut(s) | 237, 694, 2330 |
| Bsp119I | TTCGAA | 1 cut(s) | 274 |
| Bsp1286I | GDGCHC | 7 cut(s) | 269, 377, 473, 863, 917, 1582, 1596 |
| Bsp1407I | TGTACA | 1 cut(s) | 1600 |
| Bsp143I | GATC | 6 cut(s) | 355, 539, 563, 997, 2050, 2113 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1100 |
| BspACI | CCGC | 5 cut(s) | 114, 347, 1071, 1335, 2097 |
| BspANI | GGCC | 3 cut(s) | 237, 694, 2330 |
| BspCNI | CTCAG | 8 cut(s) | 73, 382, 415, 694, 830, 1237, 1317, 1802 |
| BspHI | TCATGA | 3 cut(s) | 1510, 1891, 2337 |
| BspLI | GGNNCC | 3 cut(s) | 942, 1138, 1563 |
| BspPI | GGATC | 2 cut(s) | 2058, 2108 |
| BspT104I | TTCGAA | 1 cut(s) | 274 |
| BsrDI | GCAATG | 1 cut(s) | 872 |
| BsrFI | RCCGGY | 1 cut(s) | 1854 |
| BsrGI | TGTACA | 1 cut(s) | 1600 |
| BsrI | ACTGG | 5 cut(s) | 41, 695, 803, 1432, 1575 |
| BssAI | RCCGGY | 1 cut(s) | 1854 |
| BssECI | CCNNGG | 6 cut(s) | 104, 945, 946, 1698, 2065, 2143 |
| BssMI | GATC | 6 cut(s) | 355, 539, 563, 997, 2050, 2113 |
| BssSI | CACGAG | 1 cut(s) | 2204 |
| BssT1I | CCWWGG | 2 cut(s) | 1698, 2065 |
| Bst2BI | CACGAG | 1 cut(s) | 2204 |
| Bst2UI | CCWGG | 3 cut(s) | 834, 947, 1529 |
| Bst4CI | ACNGT | 9 cut(s) | 342, 593, 865, 923, 1311, 1690, 1730, 1784, 2214 |
| Bst6I | CTCTTC | 2 cut(s) | 2070, 2348 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 761 |
| BstAUI | TGTACA | 1 cut(s) | 1600 |
| BstBI | TTCGAA | 1 cut(s) | 274 |
| BstC8I | GCNNGC | 7 cut(s) | 747, 762, 1082, 1150, 1225, 2020, 2265 |
| BstDSI | CCRYGG | 1 cut(s) | 104 |
| BstF5I | GGATG | 7 cut(s) | 322, 719, 1025, 1571, 2075, 2139, 2179 |
| BstHHI | GCGC | 1 cut(s) | 396 |
| BstKTI | GATC | 6 cut(s) | 358, 542, 566, 1000, 2053, 2116 |
| BstMAI | GTCTC | 3 cut(s) | 77, 945, 1307 |
| BstMBI | GATC | 6 cut(s) | 355, 539, 563, 997, 2050, 2113 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 761, 1086, 1110, 1625, 1756, 2024 |
| BstNI | CCWGG | 3 cut(s) | 834, 947, 1529 |
| BstNSI | RCATGY | 3 cut(s) | 407, 2022, 2267 |
| BstSCI | CCNGG | 4 cut(s) | 832, 945, 1527, 2142 |
| BstSFI | CTRYAG | 2 cut(s) | 258, 529 |
| BstSLI | GKGCMC | 1 cut(s) | 863 |
| BstV1I | GCAGC | 7 cut(s) | 300, 946, 1125, 1255, 1754, 1841, 2070 |
| BstV2I | GAAGAC | 3 cut(s) | 207, 406, 1938 |
| BsuRI | GGCC | 3 cut(s) | 237, 694, 2330 |
| BtgI | CCRYGG | 1 cut(s) | 104 |
| BtsCI | GGATG | 7 cut(s) | 322, 719, 1025, 1571, 2075, 2139, 2179 |
| BtsI | GCAGTG | 1 cut(s) | 1096 |
| BtsIMutI | CAGTG | 6 cut(s) | 48, 702, 1096, 1425, 1582, 1686 |
| Cac8I | GCNNGC | 7 cut(s) | 747, 762, 1082, 1150, 1225, 2020, 2265 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2218 |
| CciI | TCATGA | 3 cut(s) | 1510, 1891, 2337 |
| CfoI | GCGC | 1 cut(s) | 396 |
| Cfr10I | RCCGGY | 1 cut(s) | 1854 |
| Cfr13I | GGNCC | 3 cut(s) | 236, 1137, 1430 |
| CsiI | ACCWGGT | 1 cut(s) | 832 |
| Csp6I | GTAC | 4 cut(s) | 919, 1095, 1254, 1601 |
| CspAI | ACCGGT | 1 cut(s) | 1854 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 624, 657, 659, 692 |
| CviQI | GTAC | 4 cut(s) | 919, 1095, 1254, 1601 |
| DpnI | GATC | 6 cut(s) | 357, 541, 565, 999, 2052, 2115 |
| DpnII | GATC | 6 cut(s) | 355, 539, 563, 997, 2050, 2113 |
| EaeI | YGGCCR | 1 cut(s) | 2328 |
| Eam1104I | CTCTTC | 2 cut(s) | 2070, 2348 |
| EarI | CTCTTC | 2 cut(s) | 2070, 2348 |
| EciI | GGCGGA | 1 cut(s) | 1060 |
| Ecl136II | GAGCTC | 1 cut(s) | 1594 |
| Eco130I | CCWWGG | 2 cut(s) | 1698, 2065 |
| Eco24I | GRGCYC | 5 cut(s) | 269, 377, 473, 917, 1596 |
| Eco47I | GGWCC | 2 cut(s) | 1137, 1430 |
| Eco53kI | GAGCTC | 1 cut(s) | 1594 |
| Eco57I | CTGAAG | 3 cut(s) | 1698, 2219, 2240 |
| EcoICRI | GAGCTC | 1 cut(s) | 1594 |
| EcoRII | CCWGG | 3 cut(s) | 832, 945, 1527 |
| EcoT14I | CCWWGG | 2 cut(s) | 1698, 2065 |
| EcoT22I | ATGCAT | 1 cut(s) | 1630 |
| EcoT38I | GRGCYC | 5 cut(s) | 269, 377, 473, 917, 1596 |
| ErhI | CCWWGG | 2 cut(s) | 1698, 2065 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1919, 1951, 1973, 2005 |
| FaqI | GGGAC | 5 cut(s) | 166, 909, 1033, 1150, 2238 |
| FauI | CCCGC | 2 cut(s) | 340, 1342 |
| FauNDI | CATATG | 1 cut(s) | 1483 |
| Fnu4HI | GCNGC | 9 cut(s) | 115, 289, 960, 1114, 1269, 1743, 1830, 2084, 2097 |
| FokI | GGATG | 7 cut(s) | 329, 706, 1012, 1558, 2082, 2126, 2166 |
| FriOI | GRGCYC | 5 cut(s) | 269, 377, 473, 917, 1596 |
| Fsp4HI | GCNGC | 9 cut(s) | 115, 289, 960, 1114, 1269, 1743, 1830, 2084, 2097 |
| FspBI | CTAG | 5 cut(s) | 765, 852, 1620, 2108, 2315 |
| GlaI | GCGC | 1 cut(s) | 395 |
| GluI | GCNGC | 9 cut(s) | 115, 289, 960, 1114, 1269, 1743, 1830, 2084, 2097 |
| GsaI | CCCAGC | 1 cut(s) | 2291 |
| GsuI | CTGGAG | 2 cut(s) | 24, 786 |
| HaeIII | GGCC | 3 cut(s) | 237, 694, 2330 |
| HapII | CCGG | 3 cut(s) | 1855, 2143, 2350 |
| HhaI | GCGC | 1 cut(s) | 396 |
| Hin6I | GCGC | 1 cut(s) | 394 |
| HinP1I | GCGC | 1 cut(s) | 394 |
| HincII | GTYRAC | 2 cut(s) | 580, 1735 |
| HindII | GTYRAC | 2 cut(s) | 580, 1735 |
| HindIII | AAGCTT | 3 cut(s) | 758, 1794, 2159 |
| HinfI | GANTC | 9 cut(s) | 37, 821, 1021, 1300, 1350, 1490, 1841, 2191, 2283 |
| HpaII | CCGG | 3 cut(s) | 1855, 2143, 2350 |
| Hpy166II | GTNNAC | 4 cut(s) | 580, 700, 861, 1735 |
| Hpy188I | TCNGA | 9 cut(s) | 76, 355, 391, 684, 820, 1307, 1792, 1917, 2184 |
| Hpy8I | GTNNAC | 4 cut(s) | 580, 700, 861, 1735 |
| HpyAV | CCTTC | 8 cut(s) | 143, 249, 492, 1170, 1276, 1444, 1921, 2215 |
| HpyCH4III | ACNGT | 9 cut(s) | 342, 593, 865, 923, 1311, 1690, 1730, 1784, 2214 |
| HpyCH4IV | ACGT | 1 cut(s) | 675 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 761, 1086, 1110, 1625, 1756, 2024 |
| HpySE526I | ACGT | 1 cut(s) | 675 |
| HspAI | GCGC | 1 cut(s) | 394 |
| Kzo9I | GATC | 6 cut(s) | 355, 539, 563, 997, 2050, 2113 |
| LmnI | GCTCC | 6 cut(s) | 556, 805, 1073, 1678, 1885, 2294 |
| Lsp1109I | GCAGC | 7 cut(s) | 300, 946, 1125, 1255, 1754, 1841, 2070 |
| LweI | GCATC | 6 cut(s) | 67, 499, 1117, 1816, 1867, 2188 |
| MabI | ACCWGGT | 1 cut(s) | 832 |
| MaeI | CTAG | 5 cut(s) | 765, 852, 1620, 2108, 2315 |
| MaeII | ACGT | 1 cut(s) | 675 |
| MaeIII | GTNAC | 6 cut(s) | 34, 294, 836, 1041, 1784, 1885 |
| MalI | GATC | 6 cut(s) | 357, 541, 565, 999, 2052, 2115 |
| MboI | GATC | 6 cut(s) | 355, 539, 563, 997, 2050, 2113 |
| MfeI | CAATTG | 2 cut(s) | 1604, 1668 |
| MhlI | GDGCHC | 7 cut(s) | 269, 377, 473, 863, 917, 1582, 1596 |
| MlsI | TGGCCA | 1 cut(s) | 2330 |
| MluNI | TGGCCA | 1 cut(s) | 2330 |
| MlyI | GAGTC | 5 cut(s) | 31, 815, 1015, 1309, 2277 |
| MmeI | TCCRAC | 1 cut(s) | 1087 |
| Mox20I | TGGCCA | 1 cut(s) | 2330 |
| Mph1103I | ATGCAT | 1 cut(s) | 1630 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1349 |
| MscI | TGGCCA | 1 cut(s) | 2330 |
| MseI | TTAA | 6 cut(s) | 129, 1002, 1517, 1631, 1692, 1974 |
| MslI | CAYNNNNRTG | 2 cut(s) | 866, 2373 |
| Msp20I | TGGCCA | 1 cut(s) | 2330 |
| MspA1I | CMGCKG | 2 cut(s) | 1832, 2099 |
| MspI | CCGG | 3 cut(s) | 1855, 2143, 2350 |
| MspR9I | CCNGG | 4 cut(s) | 834, 947, 1529, 2144 |
| MunI | CAATTG | 2 cut(s) | 1604, 1668 |
| Mva1269I | GAATGC | 2 cut(s) | 1271, 1669 |
| MvaI | CCWGG | 3 cut(s) | 834, 947, 1529 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 761, 1086, 1110, 1625, 1756, 2024 |
| NciI | CCSGG | 1 cut(s) | 2144 |
| NdeI | CATATG | 1 cut(s) | 1483 |
| NdeII | GATC | 6 cut(s) | 355, 539, 563, 997, 2050, 2113 |
| NlaIV | GGNNCC | 3 cut(s) | 942, 1138, 1563 |
| NmuCI | GTSAC | 3 cut(s) | 34, 294, 1041 |
| NsiI | ATGCAT | 1 cut(s) | 1630 |
| NspI | RCATGY | 3 cut(s) | 407, 2022, 2267 |
| NspV | TTCGAA | 1 cut(s) | 274 |
| PaeI | GCATGC | 2 cut(s) | 2022, 2267 |
| PagI | TCATGA | 3 cut(s) | 1510, 1891, 2337 |
| PasI | CCCWGGG | 1 cut(s) | 946 |
| PciI | ACATGT | 1 cut(s) | 403 |
| PctI | GAATGC | 2 cut(s) | 1271, 1669 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1349 |
| PfeI | GAWTC | 4 cut(s) | 1350, 1490, 1841, 2191 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 725, 809, 1558 |
| PinAI | ACCGGT | 1 cut(s) | 1854 |
| PkrI | GCNGC | 9 cut(s) | 116, 290, 961, 1115, 1270, 1744, 1831, 2085, 2098 |
| PleI | GAGTC | 5 cut(s) | 31, 815, 1015, 1308, 2277 |
| PpsI | GAGTC | 5 cut(s) | 31, 815, 1015, 1308, 2277 |
| PscI | ACATGT | 1 cut(s) | 403 |
| PshBI | ATTAAT | 2 cut(s) | 129, 1631 |
| Psp124BI | GAGCTC | 1 cut(s) | 1596 |
| Psp6I | CCWGG | 3 cut(s) | 832, 945, 1527 |
| PspFI | CCCAGC | 1 cut(s) | 2287 |
| PspGI | CCWGG | 3 cut(s) | 832, 945, 1527 |
| PspN4I | GGNNCC | 3 cut(s) | 942, 1138, 1563 |
| PspPI | GGNCC | 3 cut(s) | 236, 1137, 1430 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2218 |
| PvuII | CAGCTG | 1 cut(s) | 1832 |
| RsaI | GTAC | 4 cut(s) | 920, 1096, 1255, 1602 |
| RsaNI | GTAC | 4 cut(s) | 919, 1095, 1254, 1601 |
| RseI | CAYNNNNRTG | 2 cut(s) | 866, 2373 |
| SacI | GAGCTC | 1 cut(s) | 1596 |
| SaqAI | TTAA | 6 cut(s) | 129, 1002, 1517, 1631, 1692, 1974 |
| SatI | GCNGC | 9 cut(s) | 115, 289, 960, 1114, 1269, 1743, 1830, 2084, 2097 |
| Sau3AI | GATC | 6 cut(s) | 355, 539, 563, 997, 2050, 2113 |
| Sau96I | GGNCC | 3 cut(s) | 236, 1137, 1430 |
| SchI | GAGTC | 5 cut(s) | 31, 815, 1015, 1309, 2277 |
| ScrFI | CCNGG | 4 cut(s) | 834, 947, 1529, 2144 |
| SduI | GDGCHC | 7 cut(s) | 269, 377, 473, 863, 917, 1582, 1596 |
| SexAI | ACCWGGT | 1 cut(s) | 832 |
| SfaNI | GCATC | 6 cut(s) | 67, 499, 1117, 1816, 1867, 2188 |
| SfcI | CTRYAG | 2 cut(s) | 258, 529 |
| SfuI | TTCGAA | 1 cut(s) | 274 |
| SinI | GGWCC | 2 cut(s) | 1137, 1430 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 866, 2373 |
| SmlI | CTYRAG | 2 cut(s) | 1382, 1990 |
| SmoI | CTYRAG | 2 cut(s) | 1382, 1990 |
| SphI | GCATGC | 2 cut(s) | 2022, 2267 |
| SsiI | CCGC | 5 cut(s) | 114, 347, 1071, 1335, 2097 |
| SspMI | CTAG | 5 cut(s) | 765, 852, 1620, 2108, 2315 |
| SstI | GAGCTC | 1 cut(s) | 1596 |
| StyD4I | CCNGG | 4 cut(s) | 832, 945, 1527, 2142 |
| StyI | CCWWGG | 2 cut(s) | 1698, 2065 |
| TaaI | ACNGT | 9 cut(s) | 342, 593, 865, 923, 1311, 1690, 1730, 1784, 2214 |
| TaiI | ACGT | 1 cut(s) | 678 |
| TaqI | TCGA | 4 cut(s) | 274, 1174, 1839, 1938 |
| TatI | WGTACW | 1 cut(s) | 1600 |
| TauI | GCSGC | 2 cut(s) | 117, 2099 |
| TfiI | GAWTC | 4 cut(s) | 1350, 1490, 1841, 2191 |
| Tru1I | TTAA | 6 cut(s) | 129, 1002, 1517, 1631, 1692, 1974 |
| Tru9I | TTAA | 6 cut(s) | 129, 1002, 1517, 1631, 1692, 1974 |
| TscAI | CASTG | 6 cut(s) | 48, 702, 1096, 1432, 1582, 1693 |
| TseFI | GTSAC | 3 cut(s) | 34, 294, 1041 |
| TseI | GCWGC | 7 cut(s) | 288, 959, 1113, 1268, 1742, 1829, 2083 |
| Tsp45I | GTSAC | 3 cut(s) | 34, 294, 1041 |
| TspGWI | ACGGA | 2 cut(s) | 93, 712 |
| TspRI | CASTG | 6 cut(s) | 48, 702, 1096, 1432, 1582, 1693 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 725, 809, 1558 |
| VneI | GTGCAC | 1 cut(s) | 859 |
| VpaK11BI | GGWCC | 2 cut(s) | 1137, 1430 |
| VspI | ATTAAT | 2 cut(s) | 129, 1631 |
| XapI | RAATTY | 4 cut(s) | 334, 1160, 1377, 2321 |
| XbaI | TCTAGA | 1 cut(s) | 851 |
| XceI | RCATGY | 3 cut(s) | 407, 2022, 2267 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 102, 934 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1349 |
| XspI | CTAG | 5 cut(s) | 765, 852, 1620, 2108, 2315 |
| Zsp2I | ATGCAT | 1 cut(s) | 1630 |