Replication factor C subunit
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g12990 |
| malus_domestica | MD02G1144400.v1.1 MD15G1258100.v1.1 |
| prunus_persica | Prupe.7G157200_v2.0.a1 |
| pyrus_communis | pycom15g22580 |
| rosa_chinensis | RchiOBHm_Chr2g0101071 |
| rosa_laevigata | RLG00000017049 |
| rosa_multiflora | Rmu_sc0007698.1_g000014 |
| rosa_roxburghii | Rroxscaffold_2G00141580 |
| rosa_rugosa | Rorug02G0096900 |
| rosa_samantha | Rh2AG142900 Rh2BG148000 Rh2CG149500 Rh2DG148500 |
| rosa_wichuraiana | Rw2G011260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 341 |
| Acc36I | ACCTGC | 1 cut(s) | 341 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 965 |
| AccII | CGCG | 1 cut(s) | 1620 |
| AciI | CCGC | 2 cut(s) | 985, 1618 |
| AclWI | GGATC | 2 cut(s) | 745, 1410 |
| AcoI | YGGCCR | 1 cut(s) | 2343 |
| AcsI | RAATTY | 3 cut(s) | 1169, 1421, 2336 |
| AcuI | CTGAAG | 2 cut(s) | 68, 2234 |
| AdeI | CACNNNGTG | 1 cut(s) | 890 |
| AfaI | GTAC | 5 cut(s) | 331, 1138, 1731, 2097, 2193 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 113, 350, 599, 788, 965, 1348, 1549 |
| AhlI | ACTAGT | 1 cut(s) | 1732 |
| AjiI | CACGTC | 1 cut(s) | 407 |
| AjnI | CCWGG | 3 cut(s) | 224, 633, 886 |
| Alw21I | GWGCWC | 3 cut(s) | 1151, 1597, 1877 |
| Alw26I | GTCTC | 2 cut(s) | 80, 501 |
| Alw44I | GTGCAC | 1 cut(s) | 1873 |
| AlwI | GGATC | 2 cut(s) | 745, 1410 |
| Ama87I | CYCGRG | 1 cut(s) | 1047 |
| AoxI | GGCC | 6 cut(s) | 115, 497, 630, 687, 2023, 2343 |
| ApaLI | GTGCAC | 1 cut(s) | 1873 |
| ApeKI | GCWGC | 3 cut(s) | 164, 1757, 2111 |
| ApoI | RAATTY | 3 cut(s) | 1169, 1421, 2336 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 767, 799 |
| AseI | ATTAAT | 1 cut(s) | 1707 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1364, 1767 |
| AspLEI | GCGC | 2 cut(s) | 60, 399 |
| AspS9I | GGNCC | 8 cut(s) | 115, 277, 498, 631, 688, 1445, 2023, 2263 |
| AsuC2I | CCSGG | 5 cut(s) | 55, 275, 501, 692, 2159 |
| AvaI | CYCGRG | 1 cut(s) | 1047 |
| AvaII | GGWCC | 3 cut(s) | 277, 1445, 2263 |
| BaeGI | GKGCMC | 1 cut(s) | 1877 |
| BalI | TGGCCA | 1 cut(s) | 2345 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 514, 546 |
| BauI | CACGAG | 1 cut(s) | 906 |
| BbsI | GAAGAC | 3 cut(s) | 56, 409, 1851 |
| Bbv12I | GWGCWC | 3 cut(s) | 1151, 1597, 1877 |
| BbvI | GCAGC | 3 cut(s) | 151, 1769, 2098 |
| BceAI | ACGGC | 2 cut(s) | 91, 766 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1025, 1059, 2093, 2127 |
| BciT130I | CCWGG | 3 cut(s) | 226, 635, 888 |
| BclI | TGATCA | 2 cut(s) | 457, 1779 |
| BcnI | CCSGG | 5 cut(s) | 55, 275, 501, 692, 2159 |
| BcoDI | GTCTC | 2 cut(s) | 80, 501 |
| BcuI | ACTAGT | 1 cut(s) | 1732 |
| BfaI | CTAG | 6 cut(s) | 98, 1635, 1733, 1938, 2123, 2330 |
| BfmI | CTRYAG | 3 cut(s) | 165, 580, 2112 |
| BfuAI | ACCTGC | 1 cut(s) | 341 |
| BisI | GCNGC | 3 cut(s) | 165, 1758, 2112 |
| BlpI | GCTNAGC | 2 cut(s) | 393, 1102 |
| BlsI | GCNGC | 3 cut(s) | 166, 1759, 2113 |
| BmcAI | AGTACT | 1 cut(s) | 1731 |
| Bme1390I | CCNGG | 8 cut(s) | 55, 226, 275, 501, 635, 692, 888, 2159 |
| Bme18I | GGWCC | 3 cut(s) | 277, 1445, 2263 |
| BmeT110I | CYCGRG | 1 cut(s) | 1047 |
| BmgBI | CACGTC | 1 cut(s) | 407 |
| BmgT120I | GGNCC | 8 cut(s) | 115, 277, 498, 631, 688, 1445, 2023, 2263 |
| BmiI | GGNNCC | 3 cut(s) | 690, 1578, 2264 |
| BmrFI | CCNGG | 8 cut(s) | 55, 226, 275, 501, 635, 692, 888, 2159 |
| BmsI | GCATC | 6 cut(s) | 229, 250, 442, 1495, 1554, 1882 |
| BpiI | GAAGAC | 3 cut(s) | 56, 409, 1851 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1187, 1219 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1257 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 393, 1102 |
| BpuEI | CTTGAG | 3 cut(s) | 1382, 1697, 1890 |
| BpuMI | CCSGG | 5 cut(s) | 55, 275, 501, 692, 2159 |
| BsaBI | GATNNNNATC | 2 cut(s) | 456, 1341 |
| BsaI | GGTCTC | 1 cut(s) | 501 |
| BsaJI | CCNNGG | 4 cut(s) | 107, 633, 690, 2158 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 113, 350, 599, 788, 965, 1348, 1549 |
| Bse118I | RCCGGY | 1 cut(s) | 1348 |
| Bse1I | ACTGG | 1 cut(s) | 1590 |
| Bse3DI | GCAATG | 2 cut(s) | 1683, 2247 |
| Bse8I | GATNNNNATC | 2 cut(s) | 456, 1341 |
| BseBI | CCWGG | 3 cut(s) | 226, 635, 888 |
| BseDI | CCNNGG | 4 cut(s) | 107, 633, 690, 2158 |
| BseGI | GGATG | 7 cut(s) | 728, 1315, 1586, 2090, 2154, 2194, 2251 |
| BseJI | GATNNNNATC | 2 cut(s) | 456, 1341 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 113, 350, 599, 788, 965, 1348, 1549 |
| BseMI | GCAATG | 2 cut(s) | 1683, 2247 |
| BseMII | CTCAG | 7 cut(s) | 50, 141, 384, 1116, 1248, 1818, 1943 |
| BseNI | ACTGG | 1 cut(s) | 1590 |
| BseSI | GKGCMC | 1 cut(s) | 1877 |
| BseXI | GCAGC | 3 cut(s) | 151, 1769, 2098 |
| BseYI | CCCAGC | 2 cut(s) | 1512, 2302 |
| Bsh1236I | CGCG | 1 cut(s) | 1620 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1349 |
| BshFI | GGCC | 6 cut(s) | 117, 499, 632, 689, 2025, 2345 |
| BsiEI | CGRYCG | 1 cut(s) | 1349 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1151, 1597, 1877 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1047 |
| BsiSI | CCGG | 7 cut(s) | 55, 211, 275, 501, 692, 1349, 2158 |
| BslFI | GGGAC | 3 cut(s) | 363, 1066, 2276 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 113, 350, 599, 788, 965, 1348, 1549 |
| BsmAI | GTCTC | 2 cut(s) | 80, 501 |
| BsmFI | GGGAC | 3 cut(s) | 363, 1066, 2276 |
| BsmI | GAATGC | 2 cut(s) | 1048, 1261 |
| BsnI | GGCC | 6 cut(s) | 117, 499, 632, 689, 2025, 2345 |
| Bso31I | GGTCTC | 1 cut(s) | 501 |
| BsoBI | CYCGRG | 1 cut(s) | 1047 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1151, 1597, 1877 |
| Bsp1407I | TGTACA | 1 cut(s) | 2191 |
| Bsp143I | GATC | 9 cut(s) | 129, 457, 524, 554, 750, 795, 1036, 1402, 1779 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 393, 1102 |
| BspACI | CCGC | 2 cut(s) | 985, 1618 |
| BspANI | GGCC | 6 cut(s) | 117, 499, 632, 689, 2025, 2345 |
| BspCNI | CTCAG | 7 cut(s) | 49, 142, 385, 1115, 1249, 1817, 1942 |
| BspFNI | CGCG | 1 cut(s) | 1620 |
| BspHI | TCATGA | 2 cut(s) | 1525, 2352 |
| BspLI | GGNNCC | 3 cut(s) | 690, 1578, 2264 |
| BspMAI | CTGCAG | 2 cut(s) | 169, 2116 |
| BspMI | ACCTGC | 1 cut(s) | 341 |
| BspPI | GGATC | 2 cut(s) | 745, 1410 |
| BspTNI | GGTCTC | 1 cut(s) | 501 |
| BsrDI | GCAATG | 2 cut(s) | 1683, 2247 |
| BsrFI | RCCGGY | 1 cut(s) | 1348 |
| BsrGI | TGTACA | 1 cut(s) | 2191 |
| BsrI | ACTGG | 1 cut(s) | 1590 |
| BssAI | RCCGGY | 1 cut(s) | 1348 |
| BssECI | CCNNGG | 4 cut(s) | 107, 633, 690, 2158 |
| BssMI | GATC | 9 cut(s) | 129, 457, 524, 554, 750, 795, 1036, 1402, 1779 |
| BssSI | CACGAG | 1 cut(s) | 906 |
| Bst2BI | CACGAG | 1 cut(s) | 906 |
| Bst2UI | CCWGG | 3 cut(s) | 226, 635, 888 |
| Bst4CI | ACNGT | 8 cut(s) | 334, 940, 1209, 1673, 1799, 1879, 2229, 2381 |
| Bst6I | CTCTTC | 3 cut(s) | 226, 313, 2085 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 824 |
| BstAUI | TGTACA | 1 cut(s) | 2191 |
| BstC8I | GCNNGC | 4 cut(s) | 825, 1115, 1510, 2280 |
| BstDSI | CCRYGG | 1 cut(s) | 107 |
| BstEII | GGTNACC | 1 cut(s) | 1012 |
| BstF5I | GGATG | 7 cut(s) | 728, 1315, 1586, 2090, 2154, 2194, 2251 |
| BstFNI | CGCG | 1 cut(s) | 1620 |
| BstHHI | GCGC | 2 cut(s) | 60, 399 |
| BstKTI | GATC | 9 cut(s) | 132, 460, 527, 557, 753, 798, 1039, 1405, 1782 |
| BstMAI | GTCTC | 2 cut(s) | 80, 501 |
| BstMBI | GATC | 9 cut(s) | 129, 457, 524, 554, 750, 795, 1036, 1402, 1779 |
| BstMCI | CGRYCG | 1 cut(s) | 1349 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 248, 824, 1119, 1640, 1934, 2039 |
| BstNI | CCWGG | 3 cut(s) | 226, 635, 888 |
| BstNSI | RCATGY | 2 cut(s) | 1381, 2282 |
| BstPI | GGTNACC | 1 cut(s) | 1012 |
| BstSCI | CCNGG | 8 cut(s) | 53, 224, 273, 499, 633, 690, 886, 2157 |
| BstSFI | CTRYAG | 3 cut(s) | 165, 580, 2112 |
| BstSLI | GKGCMC | 1 cut(s) | 1877 |
| BstUI | CGCG | 1 cut(s) | 1620 |
| BstV1I | GCAGC | 3 cut(s) | 151, 1769, 2098 |
| BstV2I | GAAGAC | 3 cut(s) | 56, 409, 1851 |
| BstX2I | RGATCY | 1 cut(s) | 1402 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2085 |
| BstYI | RGATCY | 1 cut(s) | 1402 |
| BsuRI | GGCC | 6 cut(s) | 117, 499, 632, 689, 2025, 2345 |
| BtgI | CCRYGG | 1 cut(s) | 107 |
| BtrI | CACGTC | 1 cut(s) | 407 |
| BtsCI | GGATG | 7 cut(s) | 728, 1315, 1586, 2090, 2154, 2194, 2251 |
| BtsI | GCAGTG | 2 cut(s) | 67, 926 |
| BtsIMutI | CAGTG | 8 cut(s) | 44, 67, 139, 926, 1205, 1597, 1678, 1866 |
| BveI | ACCTGC | 1 cut(s) | 341 |
| Cac8I | GCNNGC | 4 cut(s) | 825, 1115, 1510, 2280 |
| CciI | TCATGA | 2 cut(s) | 1525, 2352 |
| CfoI | GCGC | 2 cut(s) | 60, 399 |
| Cfr10I | RCCGGY | 1 cut(s) | 1348 |
| Cfr13I | GGNCC | 8 cut(s) | 115, 277, 498, 631, 688, 1445, 2023, 2263 |
| CpoI | CGGWCCG | 1 cut(s) | 277 |
| CsiI | ACCWGGT | 1 cut(s) | 886 |
| Csp6I | GTAC | 5 cut(s) | 330, 1137, 1730, 2096, 2192 |
| CspI | CGGWCCG | 1 cut(s) | 277 |
| CviAII | CATG | 5 cut(s) | 440, 1378, 1526, 2279, 2353 |
| CviQI | GTAC | 5 cut(s) | 330, 1137, 1730, 2096, 2192 |
| DpnI | GATC | 9 cut(s) | 131, 459, 526, 556, 752, 797, 1038, 1404, 1781 |
| DpnII | GATC | 9 cut(s) | 129, 457, 524, 554, 750, 795, 1036, 1402, 1779 |
| DraIII | CACNNNGTG | 1 cut(s) | 890 |
| EaeI | YGGCCR | 1 cut(s) | 2343 |
| Eam1104I | CTCTTC | 3 cut(s) | 226, 313, 2085 |
| EarI | CTCTTC | 3 cut(s) | 226, 313, 2085 |
| Eco31I | GGTCTC | 1 cut(s) | 501 |
| Eco32I | GATATC | 1 cut(s) | 895 |
| Eco47I | GGWCC | 3 cut(s) | 277, 1445, 2263 |
| Eco57I | CTGAAG | 2 cut(s) | 68, 2234 |
| Eco88I | CYCGRG | 1 cut(s) | 1047 |
| Eco91I | GGTNACC | 1 cut(s) | 1012 |
| EcoO109I | RGGNCCY | 3 cut(s) | 631, 688, 2263 |
| EcoO65I | GGTNACC | 1 cut(s) | 1012 |
| EcoRII | CCWGG | 3 cut(s) | 224, 633, 886 |
| EcoRV | GATATC | 1 cut(s) | 895 |
| EcoT22I | ATGCAT | 1 cut(s) | 1645 |
| FaeI | CATG | 5 cut(s) | 443, 1381, 1529, 2282, 2356 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 394, 426, 1377, 1409, 1934, 1966, 2082, 2114 |
| FaqI | GGGAC | 3 cut(s) | 363, 1066, 2276 |
| FatI | CATG | 5 cut(s) | 439, 1377, 1525, 2278, 2352 |
| FbaI | TGATCA | 2 cut(s) | 457, 1779 |
| Fnu4HI | GCNGC | 3 cut(s) | 165, 1758, 2112 |
| FokI | GGATG | 7 cut(s) | 715, 1322, 1573, 2097, 2141, 2181, 2258 |
| Fsp4HI | GCNGC | 3 cut(s) | 165, 1758, 2112 |
| FspBI | CTAG | 6 cut(s) | 98, 1635, 1733, 1938, 2123, 2330 |
| GlaI | GCGC | 2 cut(s) | 59, 398 |
| GluI | GCNGC | 3 cut(s) | 165, 1758, 2112 |
| GsaI | CCCAGC | 2 cut(s) | 1516, 2306 |
| HaeIII | GGCC | 6 cut(s) | 117, 499, 632, 689, 2025, 2345 |
| HapII | CCGG | 7 cut(s) | 55, 211, 275, 501, 692, 1349, 2158 |
| HhaI | GCGC | 2 cut(s) | 60, 399 |
| Hin1II | CATG | 5 cut(s) | 443, 1381, 1529, 2282, 2356 |
| Hin6I | GCGC | 2 cut(s) | 58, 397 |
| HinP1I | GCGC | 2 cut(s) | 58, 397 |
| HincII | GTYRAC | 1 cut(s) | 1750 |
| HindII | GTYRAC | 1 cut(s) | 1750 |
| HindIII | AAGCTT | 5 cut(s) | 821, 1281, 1809, 1886, 2174 |
| HpaII | CCGG | 7 cut(s) | 55, 211, 275, 501, 692, 1349, 2158 |
| Hpy166II | GTNNAC | 5 cut(s) | 341, 469, 1750, 1817, 1875 |
| Hpy188III | TCNNGA | 8 cut(s) | 908, 1443, 1526, 1543, 1550, 1691, 1907, 2353 |
| Hpy8I | GTNNAC | 5 cut(s) | 341, 469, 1750, 1817, 1875 |
| HpyAV | CCTTC | 4 cut(s) | 428, 489, 1654, 1936 |
| HpyCH4III | ACNGT | 8 cut(s) | 334, 940, 1209, 1673, 1799, 1879, 2229, 2381 |
| HpyCH4IV | ACGT | 1 cut(s) | 406 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 248, 824, 1119, 1640, 1934, 2039 |
| HpySE526I | ACGT | 1 cut(s) | 406 |
| Hsp92II | CATG | 5 cut(s) | 443, 1381, 1529, 2282, 2356 |
| HspAI | GCGC | 2 cut(s) | 58, 397 |
| Ksp22I | TGATCA | 2 cut(s) | 457, 1779 |
| Kzo9I | GATC | 9 cut(s) | 129, 457, 524, 554, 750, 795, 1036, 1402, 1779 |
| LmnI | GCTCC | 4 cut(s) | 1146, 1693, 1900, 2309 |
| Lsp1109I | GCAGC | 3 cut(s) | 151, 1769, 2098 |
| LweI | GCATC | 6 cut(s) | 229, 250, 442, 1495, 1554, 1882 |
| MabI | ACCWGGT | 1 cut(s) | 886 |
| MaeI | CTAG | 6 cut(s) | 98, 1635, 1733, 1938, 2123, 2330 |
| MaeII | ACGT | 1 cut(s) | 406 |
| MaeIII | GTNAC | 6 cut(s) | 154, 300, 1012, 1074, 1199, 1799 |
| MalI | GATC | 9 cut(s) | 131, 459, 526, 556, 752, 797, 1038, 1404, 1781 |
| MboI | GATC | 9 cut(s) | 129, 457, 524, 554, 750, 795, 1036, 1402, 1779 |
| MfeI | CAATTG | 1 cut(s) | 2079 |
| MflI | RGATCY | 1 cut(s) | 1402 |
| MhlI | GDGCHC | 3 cut(s) | 1151, 1597, 1877 |
| MlsI | TGGCCA | 1 cut(s) | 2345 |
| MluNI | TGGCCA | 1 cut(s) | 2345 |
| MlyI | GAGTC | 5 cut(s) | 884, 1048, 1207, 1897, 2292 |
| MmeI | TCCRAC | 1 cut(s) | 153 |
| Mox20I | TGGCCA | 1 cut(s) | 2345 |
| Mph1103I | ATGCAT | 1 cut(s) | 1645 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1364, 1767 |
| MscI | TGGCCA | 1 cut(s) | 2345 |
| MseI | TTAA | 8 cut(s) | 641, 698, 989, 1061, 1532, 1611, 1707, 2235 |
| Msp20I | TGGCCA | 1 cut(s) | 2345 |
| MspI | CCGG | 7 cut(s) | 55, 211, 275, 501, 692, 1349, 2158 |
| MspR9I | CCNGG | 8 cut(s) | 55, 226, 275, 501, 635, 692, 888, 2159 |
| MunI | CAATTG | 1 cut(s) | 2079 |
| Mva1269I | GAATGC | 2 cut(s) | 1048, 1261 |
| MvaI | CCWGG | 3 cut(s) | 226, 635, 888 |
| MvnI | CGCG | 1 cut(s) | 1620 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 248, 824, 1119, 1640, 1934, 2039 |
| NciI | CCSGG | 5 cut(s) | 55, 275, 501, 692, 2159 |
| NdeII | GATC | 9 cut(s) | 129, 457, 524, 554, 750, 795, 1036, 1402, 1779 |
| NlaIII | CATG | 5 cut(s) | 443, 1381, 1529, 2282, 2356 |
| NlaIV | GGNNCC | 3 cut(s) | 690, 1578, 2264 |
| NmuCI | GTSAC | 4 cut(s) | 154, 300, 1074, 1199 |
| NsiI | ATGCAT | 1 cut(s) | 1645 |
| NspI | RCATGY | 2 cut(s) | 1381, 2282 |
| PaeI | GCATGC | 1 cut(s) | 2282 |
| PaeR7I | CTCGAG | 1 cut(s) | 1047 |
| PagI | TCATGA | 2 cut(s) | 1525, 2352 |
| PaqCI | CACCTGC | 1 cut(s) | 341 |
| PctI | GAATGC | 2 cut(s) | 1048, 1261 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1364, 1767 |
| PfeI | GAWTC | 5 cut(s) | 146, 1365, 1546, 1856, 2206 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 965 |
| PkrI | GCNGC | 3 cut(s) | 166, 1759, 2113 |
| PleI | GAGTC | 5 cut(s) | 883, 1048, 1206, 1897, 2292 |
| PpsI | GAGTC | 5 cut(s) | 883, 1048, 1206, 1897, 2292 |
| PpuMI | RGGWCCY | 1 cut(s) | 2263 |
| PshBI | ATTAAT | 1 cut(s) | 1707 |
| Psp5II | RGGWCCY | 1 cut(s) | 2263 |
| Psp6I | CCWGG | 3 cut(s) | 224, 633, 886 |
| PspEI | GGTNACC | 1 cut(s) | 1012 |
| PspFI | CCCAGC | 2 cut(s) | 1512, 2302 |
| PspGI | CCWGG | 3 cut(s) | 224, 633, 886 |
| PspN4I | GGNNCC | 3 cut(s) | 690, 1578, 2264 |
| PspPI | GGNCC | 8 cut(s) | 115, 277, 498, 631, 688, 1445, 2023, 2263 |
| PspPPI | RGGWCCY | 1 cut(s) | 2263 |
| PspXI | VCTCGAGB | 1 cut(s) | 1047 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 322, 354 |
| PstI | CTGCAG | 2 cut(s) | 169, 2116 |
| PsuI | RGATCY | 1 cut(s) | 1402 |
| RsaI | GTAC | 5 cut(s) | 331, 1138, 1731, 2097, 2193 |
| RsaNI | GTAC | 5 cut(s) | 330, 1137, 1730, 2096, 2192 |
| Rsr2I | CGGWCCG | 1 cut(s) | 277 |
| RsrII | CGGWCCG | 1 cut(s) | 277 |
| SaqAI | TTAA | 8 cut(s) | 641, 698, 989, 1061, 1532, 1611, 1707, 2235 |
| SatI | GCNGC | 3 cut(s) | 165, 1758, 2112 |
| Sau3AI | GATC | 9 cut(s) | 129, 457, 524, 554, 750, 795, 1036, 1402, 1779 |
| Sau96I | GGNCC | 8 cut(s) | 115, 277, 498, 631, 688, 1445, 2023, 2263 |
| ScaI | AGTACT | 1 cut(s) | 1731 |
| SchI | GAGTC | 5 cut(s) | 884, 1048, 1207, 1897, 2292 |
| ScrFI | CCNGG | 8 cut(s) | 55, 226, 275, 501, 635, 692, 888, 2159 |
| SduI | GDGCHC | 3 cut(s) | 1151, 1597, 1877 |
| SexAI | ACCWGGT | 1 cut(s) | 886 |
| SfaNI | GCATC | 6 cut(s) | 229, 250, 442, 1495, 1554, 1882 |
| SfcI | CTRYAG | 3 cut(s) | 165, 580, 2112 |
| Sfr274I | CTCGAG | 1 cut(s) | 1047 |
| SinI | GGWCC | 3 cut(s) | 277, 1445, 2263 |
| SlaI | CTCGAG | 1 cut(s) | 1047 |
| SmlI | CTYRAG | 4 cut(s) | 1047, 1397, 1712, 1905 |
| SmoI | CTYRAG | 4 cut(s) | 1047, 1397, 1712, 1905 |
| SpeI | ACTAGT | 1 cut(s) | 1732 |
| SphI | GCATGC | 1 cut(s) | 2282 |
| SsiI | CCGC | 2 cut(s) | 985, 1618 |
| SspMI | CTAG | 6 cut(s) | 98, 1635, 1733, 1938, 2123, 2330 |
| StyD4I | CCNGG | 8 cut(s) | 53, 224, 273, 499, 633, 690, 886, 2157 |
| TaaI | ACNGT | 8 cut(s) | 334, 940, 1209, 1673, 1799, 1879, 2229, 2381 |
| TaiI | ACGT | 1 cut(s) | 409 |
| TaqI | TCGA | 6 cut(s) | 547, 1035, 1048, 1240, 1345, 2103 |
| TaqII | GACCGA | 1 cut(s) | 1767 |
| TatI | WGTACW | 2 cut(s) | 1729, 2191 |
| TfiI | GAWTC | 5 cut(s) | 146, 1365, 1546, 1856, 2206 |
| Tru1I | TTAA | 8 cut(s) | 641, 698, 989, 1061, 1532, 1611, 1707, 2235 |
| Tru9I | TTAA | 8 cut(s) | 641, 698, 989, 1061, 1532, 1611, 1707, 2235 |
| TscAI | CASTG | 8 cut(s) | 51, 67, 139, 933, 1212, 1597, 1678, 1866 |
| TseFI | GTSAC | 4 cut(s) | 154, 300, 1074, 1199 |
| TseI | GCWGC | 3 cut(s) | 164, 1757, 2111 |
| Tsp45I | GTSAC | 4 cut(s) | 154, 300, 1074, 1199 |
| TspDTI | ATGAA | 8 cut(s) | 84, 1275, 1293, 1326, 1857, 1979, 2143, 2341 |
| TspGWI | ACGGA | 1 cut(s) | 1931 |
| TspRI | CASTG | 8 cut(s) | 51, 67, 139, 933, 1212, 1597, 1678, 1866 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 965 |
| VneI | GTGCAC | 1 cut(s) | 1873 |
| VpaK11BI | GGWCC | 3 cut(s) | 277, 1445, 2263 |
| VspI | ATTAAT | 1 cut(s) | 1707 |
| XapI | RAATTY | 3 cut(s) | 1169, 1421, 2336 |
| XceI | RCATGY | 2 cut(s) | 1381, 2282 |
| XhoI | CTCGAG | 1 cut(s) | 1047 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1364, 1767 |
| XspI | CTAG | 6 cut(s) | 98, 1635, 1733, 1938, 2123, 2330 |
| ZrmI | AGTACT | 1 cut(s) | 1731 |
| Zsp2I | ATGCAT | 1 cut(s) | 1645 |