Rmu_sc0007698.1_g000014

Replication factor C subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007698.1
OG0016238
Physical Location & Seq
Forward (+)
52341 .. 55630
3290 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007698.1_g000014.1.cds

Sequence Viewer

Length: 2301 bp
atggagaataacttttcaaggcatagcagaacttctcagacctcactgaagacccggcgcagtggttatgaaccatctgacaacgagactgatttcctagaaacgccgtggcatggccacaataggaagatcagtggaggcttagaatctgaggtgacaaaagctgcagggttggagttggcaagaaacattagccctttcaaacatagccggaggcactcttccaggtttgaatatgatgcttcttctgcaagaaatgatgcagtagtaagcccggtccgaagaagaaccagcagtaagtcaccatacaagcaaagaagagaagatggtactgtttgttcaccaatagcaggtgttgaaactcgcagaaatatcagtcccttgtcaaaagctgagcgcagaagacgtgcttctcctttgaaaccagaaaaagaagggcatgatgtgaatgatgctgatcaaattgtgaactcaaacaggaaacaaagccaaagaaggcccggtagagacccccaaagcagaagatcatctactgccccgagagttcgagcaagatcagaagtagaaaaaaaaggcaactatagtgcaacaccaactaaaggtgaaagaacaccatcaccattgtcaaaggccctggtattaacaacatcaactgcaagggagagaacaccatcaccattgtcaaaggccccggtattaacaacaccaactgcaagggagagatcaccatccccaatctcaaaagggttgatccagcaacaaagacaacacacaaaatcgccgtctgttggtgagatcaatgagatgattgccaatgcaaagcttgctagaactcctttggaggctaattctccattagctttcggaagttcagagtcttttgcaccaggtgatatcttcttctctcgtgagtgcaaaatcttggcactgcccaaaactgtcaatcccataccaaaaccaaagaatggtagtggttttgagaaccgcttaattagtcctaatgtcaaaatggttaccccaagaggaaatggtttcgatcagaatgctcgagggactcaattaagctataatttgtcacagacaaccacaacaacatcaagctcagcattgagcaggcaaagcagtaagatgagtggtacaagtgggagcacaactgcgagtgccaagaaattcacagcaaatagaaagaaaagtgagagtcactcactgtttgcttgtatgagaaagggagggtcttgtcggaaaacaaaatcacctgagcattctcctgttttcaatgaagcttcatttatacaaaaggcatttgtggatgaaagtttaaggcagttttgggctgataaccatcgaccggcttcgttgaatggattcacttgccacatgcaagaagctcaacttctcaaggatctggtaattgacaataagtttccccacattttgttatccggaccatctggttctgggaaaaaagctctaacaatggctttcctaagagagatatatggtgatgcaagctgggaaatatctcatgatttaagatacttccagattcaggaacaaatgccgatgcaagtaatggttccattgacatccagtgctcaccatatagagcttaatgtccgcgttgaagcaaatgctagatatgcattgatgggtttagtgaaggaaatcaacagtgagaatgacattgctcctgaaatcagcactattaatctcaagggaaatcataaagtgctagttctctacgatgttgaccgagcagcagaacatattcagcatttgatcaaatgggtgatggactgttactcagaagcttgtaaactcattctctgctgtgaaaatgatgaagacatcgttgaatcagtgaaaaaccggtgcacagttatcaagcttgatgctcctattacggaagttcttgctcagatagcaaggaaggaaaactttgatctacctatgaactttgctgataagattgctaacaaatctaagcagaacctgagaaaagcaatcatgggccttgaagcaaccaaagcacacaactatccttttgtagataaccaaccaattccaattggatgggaagaggtactagttgaagttgctgcagaaatcctagctgacccgtcaccaaagaggttatttttcatccggggaaagtttcaaaagcttcttgtgggttttgtacatccgaaactgattctactgaagctggtagaacagttccttaaagcaatggatgggagttctaaaagggacctatattattggcatgcttactatgtaagttctctccctcgtaattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03030 ko03420 ko03430 map03030 map03420 map03430
Pfam Domains
Protein Families
DNA_pol3_delta2 NmrA

Protein Analysis

766

Amino Acids

85.67

Weight (kDa)

9.74

Isoelectric Point (pI)

59.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016238)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12990
malus_domestica MD02G1144400.v1.1 MD15G1258100.v1.1
prunus_persica Prupe.7G157200_v2.0.a1
pyrus_communis pycom15g22580
rosa_chinensis RchiOBHm_Chr2g0101071
rosa_laevigata RLG00000017049
rosa_multiflora Rmu_sc0007698.1_g000014
rosa_roxburghii Rroxscaffold_2G00141580
rosa_rugosa Rorug02G0096900
rosa_samantha Rh2AG142900 Rh2BG148000 Rh2CG149500 Rh2DG148500
rosa_wichuraiana Rw2G011260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 341
Acc36I ACCTGC 1 cut(s) 341
AccB7I CCANNNNNTGG 1 cut(s) 965
AccII CGCG 1 cut(s) 1620
AccIII TCCGGA 1 cut(s) 1442
AciI CCGC 2 cut(s) 985, 1618
AclWI GGATC 2 cut(s) 745, 1410
AcoI YGGCCR 1 cut(s) 115
AcsI RAATTY 1 cut(s) 1169
AcuI CTGAAG 2 cut(s) 68, 2222
AdeI CACNNNGTG 1 cut(s) 890
AfaI GTAC 4 cut(s) 331, 1138, 2085, 2181
AfiI CCNNNNNNNGG 7 cut(s) 113, 350, 599, 788, 965, 1348, 1549
AgeI ACCGGT 1 cut(s) 1869
AhlI ACTAGT 1 cut(s) 2086
AjiI CACGTC 1 cut(s) 407
AjnI CCWGG 3 cut(s) 224, 633, 886
Alw21I GWGCWC 3 cut(s) 1151, 1597, 1877
Alw26I GTCTC 2 cut(s) 80, 501
Alw44I GTGCAC 1 cut(s) 1873
AlwI GGATC 2 cut(s) 745, 1410
AlwNI CAGNNNCTG 1 cut(s) 1993
Ama87I CYCGRG 2 cut(s) 538, 1047
Aor13HI TCCGGA 1 cut(s) 1442
AoxI GGCC 5 cut(s) 115, 497, 630, 687, 2011
ApaLI GTGCAC 1 cut(s) 1873
ApeKI GCWGC 3 cut(s) 164, 1757, 2099
ApoI RAATTY 1 cut(s) 1169
ArsI GACNNNNNNTTYG 2 cut(s) 767, 799
AseI ATTAAT 1 cut(s) 1707
AsiGI ACCGGT 1 cut(s) 1869
Asp700I GAANNNNTTC 2 cut(s) 1364, 1767
AspLEI GCGC 2 cut(s) 60, 399
AspS9I GGNCC 7 cut(s) 277, 498, 631, 688, 1445, 2011, 2251
AsuC2I CCSGG 5 cut(s) 55, 275, 501, 692, 2147
AvaI CYCGRG 2 cut(s) 538, 1047
AvaII GGWCC 3 cut(s) 277, 1445, 2251
BaeGI GKGCMC 1 cut(s) 1877
BalI TGGCCA 1 cut(s) 117
BarI GAAGNNNNNNTAC 2 cut(s) 514, 546
BauI CACGAG 1 cut(s) 906
BbsI GAAGAC 3 cut(s) 56, 409, 1851
Bbv12I GWGCWC 3 cut(s) 1151, 1597, 1877
BbvI GCAGC 3 cut(s) 151, 1769, 2086
BceAI ACGGC 2 cut(s) 91, 766
BcgI CGANNNNNNTGC 2 cut(s) 1025, 1059
BciT130I CCWGG 3 cut(s) 226, 635, 888
BclI TGATCA 2 cut(s) 457, 1779
BcnI CCSGG 5 cut(s) 55, 275, 501, 692, 2147
BcoDI GTCTC 2 cut(s) 80, 501
BcuI ACTAGT 1 cut(s) 2086
BfaI CTAG 6 cut(s) 98, 828, 1635, 1733, 2087, 2111
BfmI CTRYAG 3 cut(s) 165, 580, 2100
BfuAI ACCTGC 1 cut(s) 341
BisI GCNGC 3 cut(s) 165, 1758, 2100
BlpI GCTNAGC 2 cut(s) 393, 1102
BlsI GCNGC 3 cut(s) 166, 1759, 2101
Bme1390I CCNGG 8 cut(s) 55, 226, 275, 501, 635, 692, 888, 2147
Bme18I GGWCC 3 cut(s) 277, 1445, 2251
BmeT110I CYCGRG 2 cut(s) 538, 1047
BmgBI CACGTC 1 cut(s) 407
BmgT120I GGNCC 7 cut(s) 277, 498, 631, 688, 1445, 2011, 2251
BmiI GGNNCC 3 cut(s) 690, 1578, 2252
BmrFI CCNGG 8 cut(s) 55, 226, 275, 501, 635, 692, 888, 2147
BmsI GCATC 6 cut(s) 229, 250, 442, 1495, 1554, 1882
BpiI GAAGAC 3 cut(s) 56, 409, 1851
BplI GAGNNNNNCTC 2 cut(s) 1187, 1219
Bpu10I CCTNAGC 1 cut(s) 1257
Bpu1102I GCTNAGC 2 cut(s) 393, 1102
BpuEI CTTGAG 2 cut(s) 1382, 1697
BpuMI CCSGG 5 cut(s) 55, 275, 501, 692, 2147
BsaBI GATNNNNATC 3 cut(s) 456, 727, 1341
BsaI GGTCTC 1 cut(s) 501
BsaJI CCNNGG 4 cut(s) 107, 633, 690, 2146
BsaWI WCCGGW 2 cut(s) 1442, 1869
Bsc4I CCNNNNNNNGG 7 cut(s) 113, 350, 599, 788, 965, 1348, 1549
Bse118I RCCGGY 2 cut(s) 1348, 1869
Bse1I ACTGG 1 cut(s) 1590
Bse3DI GCAATG 2 cut(s) 1683, 2235
Bse8I GATNNNNATC 3 cut(s) 456, 727, 1341
BseAI TCCGGA 1 cut(s) 1442
BseBI CCWGG 3 cut(s) 226, 635, 888
BseDI CCNNGG 4 cut(s) 107, 633, 690, 2146
BseGI GGATG 7 cut(s) 728, 1315, 1586, 2078, 2142, 2182, 2239
BseJI GATNNNNATC 3 cut(s) 456, 727, 1341
BseLI CCNNNNNNNGG 7 cut(s) 113, 350, 599, 788, 965, 1348, 1549
BseMI GCAATG 2 cut(s) 1683, 2235
BseMII CTCAG 8 cut(s) 50, 141, 384, 1116, 1248, 1818, 1931, 1985
BseNI ACTGG 1 cut(s) 1590
BseSI GKGCMC 1 cut(s) 1877
BseXI GCAGC 3 cut(s) 151, 1769, 2086
BseYI CCCAGC 1 cut(s) 1512
Bsh1236I CGCG 1 cut(s) 1620
Bsh1285I CGRYCG 1 cut(s) 1349
BshFI GGCC 5 cut(s) 117, 499, 632, 689, 2013
BshTI ACCGGT 1 cut(s) 1869
BsiEI CGRYCG 1 cut(s) 1349
BsiHKAI GWGCWC 3 cut(s) 1151, 1597, 1877
BsiHKCI CYCGRG 2 cut(s) 538, 1047
BsiSI CCGG 9 cut(s) 55, 211, 275, 501, 692, 1349, 1443, 1870, 2146
BslFI GGGAC 3 cut(s) 363, 1066, 2264
BslI CCNNNNNNNGG 7 cut(s) 113, 350, 599, 788, 965, 1348, 1549
BsmAI GTCTC 2 cut(s) 80, 501
BsmFI GGGAC 3 cut(s) 363, 1066, 2264
BsmI GAATGC 2 cut(s) 1048, 1261
BsnI GGCC 5 cut(s) 117, 499, 632, 689, 2013
Bso31I GGTCTC 1 cut(s) 501
BsoBI CYCGRG 2 cut(s) 538, 1047
Bsp1286I GDGCHC 3 cut(s) 1151, 1597, 1877
Bsp13I TCCGGA 1 cut(s) 1442
Bsp1407I TGTACA 1 cut(s) 2179
Bsp1720I GCTNAGC 2 cut(s) 393, 1102
BspACI CCGC 2 cut(s) 985, 1618
BspANI GGCC 5 cut(s) 117, 499, 632, 689, 2013
BspCNI CTCAG 8 cut(s) 49, 142, 385, 1115, 1249, 1817, 1930, 1986
BspEI TCCGGA 1 cut(s) 1442
BspFNI CGCG 1 cut(s) 1620
BspHI TCATGA 1 cut(s) 1525
BspLI GGNNCC 3 cut(s) 690, 1578, 2252
BspMAI CTGCAG 2 cut(s) 169, 2104
BspMI ACCTGC 1 cut(s) 341
BspPI GGATC 2 cut(s) 745, 1410
BspTNI GGTCTC 1 cut(s) 501
BsrDI GCAATG 2 cut(s) 1683, 2235
BsrFI RCCGGY 2 cut(s) 1348, 1869
BsrGI TGTACA 1 cut(s) 2179
BsrI ACTGG 1 cut(s) 1590
BssAI RCCGGY 2 cut(s) 1348, 1869
BssECI CCNNGG 4 cut(s) 107, 633, 690, 2146
BssSI CACGAG 1 cut(s) 906
Bst2BI CACGAG 1 cut(s) 906
Bst2UI CCWGG 3 cut(s) 226, 635, 888
Bst4CI ACNGT 7 cut(s) 334, 940, 1209, 1673, 1799, 1879, 2217
Bst6I CTCTTC 3 cut(s) 226, 313, 2073
BstAPI GCANNNNNTGC 1 cut(s) 824
BstAUI TGTACA 1 cut(s) 2179
BstC8I GCNNGC 4 cut(s) 825, 1115, 1510, 2268
BstDSI CCRYGG 1 cut(s) 107
BstEII GGTNACC 1 cut(s) 1012
BstF5I GGATG 7 cut(s) 728, 1315, 1586, 2078, 2142, 2182, 2239
BstFNI CGCG 1 cut(s) 1620
BstHHI GCGC 2 cut(s) 60, 399
BstMAI GTCTC 2 cut(s) 80, 501
BstMCI CGRYCG 1 cut(s) 1349
BstMWI GCNNNNNNNGC 6 cut(s) 248, 824, 1119, 1640, 1922, 2027
BstNI CCWGG 3 cut(s) 226, 635, 888
BstNSI RCATGY 2 cut(s) 1381, 2270
BstPI GGTNACC 1 cut(s) 1012
BstSCI CCNGG 8 cut(s) 53, 224, 273, 499, 633, 690, 886, 2145
BstSFI CTRYAG 3 cut(s) 165, 580, 2100
BstSLI GKGCMC 1 cut(s) 1877
BstUI CGCG 1 cut(s) 1620
BstV1I GCAGC 3 cut(s) 151, 1769, 2086
BstV2I GAAGAC 3 cut(s) 56, 409, 1851
BstX2I RGATCY 1 cut(s) 1402
BstXI CCANNNNNNTGG 1 cut(s) 2073
BstYI RGATCY 1 cut(s) 1402
BsuRI GGCC 5 cut(s) 117, 499, 632, 689, 2013
BtgI CCRYGG 1 cut(s) 107
BtrI CACGTC 1 cut(s) 407
BtsCI GGATG 7 cut(s) 728, 1315, 1586, 2078, 2142, 2182, 2239
BtsI GCAGTG 2 cut(s) 67, 926
BtsIMutI CAGTG 8 cut(s) 44, 67, 139, 926, 1205, 1597, 1678, 1866
BveI ACCTGC 1 cut(s) 341
Cac8I GCNNGC 4 cut(s) 825, 1115, 1510, 2268
CaiI CAGNNNCTG 1 cut(s) 1993
CciI TCATGA 1 cut(s) 1525
CfoI GCGC 2 cut(s) 60, 399
Cfr10I RCCGGY 2 cut(s) 1348, 1869
Cfr13I GGNCC 7 cut(s) 277, 498, 631, 688, 1445, 2011, 2251
CpoI CGGWCCG 1 cut(s) 277
CsiI ACCWGGT 1 cut(s) 886
Csp6I GTAC 4 cut(s) 330, 1137, 2084, 2180
CspAI ACCGGT 1 cut(s) 1869
CspI CGGWCCG 1 cut(s) 277
CviAII CATG 6 cut(s) 113, 440, 1378, 1526, 2008, 2267
CviQI GTAC 4 cut(s) 330, 1137, 2084, 2180
DraIII CACNNNGTG 1 cut(s) 890
EaeI YGGCCR 1 cut(s) 115
Eam1104I CTCTTC 3 cut(s) 226, 313, 2073
EarI CTCTTC 3 cut(s) 226, 313, 2073
Eco31I GGTCTC 1 cut(s) 501
Eco32I GATATC 1 cut(s) 895
Eco47I GGWCC 3 cut(s) 277, 1445, 2251
Eco57I CTGAAG 2 cut(s) 68, 2222
Eco88I CYCGRG 2 cut(s) 538, 1047
Eco91I GGTNACC 1 cut(s) 1012
EcoO109I RGGNCCY 3 cut(s) 631, 688, 2251
EcoO65I GGTNACC 1 cut(s) 1012
EcoRII CCWGG 3 cut(s) 224, 633, 886
EcoRV GATATC 1 cut(s) 895
EcoT22I ATGCAT 1 cut(s) 1645
FaeI CATG 6 cut(s) 116, 443, 1381, 1529, 2011, 2270
FalI AAGNNNNNCTT 6 cut(s) 394, 426, 1377, 1409, 1922, 1954
FaqI GGGAC 3 cut(s) 363, 1066, 2264
FatI CATG 6 cut(s) 112, 439, 1377, 1525, 2007, 2266
FbaI TGATCA 2 cut(s) 457, 1779
Fnu4HI GCNGC 3 cut(s) 165, 1758, 2100
FokI GGATG 7 cut(s) 715, 1322, 1573, 2085, 2129, 2169, 2246
Fsp4HI GCNGC 3 cut(s) 165, 1758, 2100
FspBI CTAG 6 cut(s) 98, 828, 1635, 1733, 2087, 2111
GlaI GCGC 2 cut(s) 59, 398
GluI GCNGC 3 cut(s) 165, 1758, 2100
GsaI CCCAGC 1 cut(s) 1516
HaeIII GGCC 5 cut(s) 117, 499, 632, 689, 2013
HapII CCGG 9 cut(s) 55, 211, 275, 501, 692, 1349, 1443, 1870, 2146
HhaI GCGC 2 cut(s) 60, 399
Hin1II CATG 6 cut(s) 116, 443, 1381, 1529, 2011, 2270
Hin6I GCGC 2 cut(s) 58, 397
HinP1I GCGC 2 cut(s) 58, 397
HincII GTYRAC 1 cut(s) 1750
HindII GTYRAC 1 cut(s) 1750
HindIII AAGCTT 5 cut(s) 821, 1281, 1809, 1886, 2162
HinfI GANTC 8 cut(s) 146, 875, 1054, 1198, 1365, 1546, 1856, 2194
HpaII CCGG 9 cut(s) 55, 211, 275, 501, 692, 1349, 1443, 1870, 2146
Hpy166II GTNNAC 5 cut(s) 341, 469, 1750, 1817, 1875
Hpy188III TCNNGA 6 cut(s) 908, 1443, 1526, 1543, 1550, 1691
Hpy8I GTNNAC 5 cut(s) 341, 469, 1750, 1817, 1875
HpyAV CCTTC 4 cut(s) 428, 489, 1654, 1924
HpyCH4III ACNGT 7 cut(s) 334, 940, 1209, 1673, 1799, 1879, 2217
HpyCH4IV ACGT 1 cut(s) 406
HpyF10VI GCNNNNNNNGC 6 cut(s) 248, 824, 1119, 1640, 1922, 2027
HpySE526I ACGT 1 cut(s) 406
Hsp92II CATG 6 cut(s) 116, 443, 1381, 1529, 2011, 2270
HspAI GCGC 2 cut(s) 58, 397
Kpn2I TCCGGA 1 cut(s) 1442
Ksp22I TGATCA 2 cut(s) 457, 1779
LmnI GCTCC 3 cut(s) 1146, 1693, 1900
Lsp1109I GCAGC 3 cut(s) 151, 1769, 2086
LweI GCATC 6 cut(s) 229, 250, 442, 1495, 1554, 1882
MabI ACCWGGT 1 cut(s) 886
MaeI CTAG 6 cut(s) 98, 828, 1635, 1733, 2087, 2111
MaeII ACGT 1 cut(s) 406
MaeIII GTNAC 7 cut(s) 154, 300, 1012, 1074, 1199, 1799, 2121
MfeI CAATTG 1 cut(s) 2067
MflI RGATCY 1 cut(s) 1402
MhlI GDGCHC 3 cut(s) 1151, 1597, 1877
MlsI TGGCCA 1 cut(s) 117
MluNI TGGCCA 1 cut(s) 117
MlyI GAGTC 3 cut(s) 884, 1048, 1207
MmeI TCCRAC 2 cut(s) 153, 1220
Mox20I TGGCCA 1 cut(s) 117
Mph1103I ATGCAT 1 cut(s) 1645
MroI TCCGGA 1 cut(s) 1442
MroXI GAANNNNTTC 2 cut(s) 1364, 1767
MscI TGGCCA 1 cut(s) 117
Msp20I TGGCCA 1 cut(s) 117
MspI CCGG 9 cut(s) 55, 211, 275, 501, 692, 1349, 1443, 1870, 2146
MspR9I CCNGG 8 cut(s) 55, 226, 275, 501, 635, 692, 888, 2147
MunI CAATTG 1 cut(s) 2067
Mva1269I GAATGC 2 cut(s) 1048, 1261
MvaI CCWGG 3 cut(s) 226, 635, 888
MvnI CGCG 1 cut(s) 1620
MwoI GCNNNNNNNGC 6 cut(s) 248, 824, 1119, 1640, 1922, 2027
NciI CCSGG 5 cut(s) 55, 275, 501, 692, 2147
NlaIII CATG 6 cut(s) 116, 443, 1381, 1529, 2011, 2270
NlaIV GGNNCC 3 cut(s) 690, 1578, 2252
NmuCI GTSAC 5 cut(s) 154, 300, 1074, 1199, 2121
NsiI ATGCAT 1 cut(s) 1645
NspI RCATGY 2 cut(s) 1381, 2270
PaeI GCATGC 1 cut(s) 2270
PaeR7I CTCGAG 1 cut(s) 1047
PagI TCATGA 1 cut(s) 1525
PaqCI CACCTGC 1 cut(s) 341
PctI GAATGC 2 cut(s) 1048, 1261
PdmI GAANNNNTTC 2 cut(s) 1364, 1767
PfeI GAWTC 5 cut(s) 146, 1365, 1546, 1856, 2194
PflMI CCANNNNNTGG 1 cut(s) 965
PinAI ACCGGT 1 cut(s) 1869
PkrI GCNGC 3 cut(s) 166, 1759, 2101
PleI GAGTC 3 cut(s) 883, 1048, 1206
PpsI GAGTC 3 cut(s) 883, 1048, 1206
PpuMI RGGWCCY 1 cut(s) 2251
PshBI ATTAAT 1 cut(s) 1707
Psp5II RGGWCCY 1 cut(s) 2251
Psp6I CCWGG 3 cut(s) 224, 633, 886
PspEI GGTNACC 1 cut(s) 1012
PspFI CCCAGC 1 cut(s) 1512
PspGI CCWGG 3 cut(s) 224, 633, 886
PspN4I GGNNCC 3 cut(s) 690, 1578, 2252
PspPI GGNCC 7 cut(s) 277, 498, 631, 688, 1445, 2011, 2251
PspPPI RGGWCCY 1 cut(s) 2251
PspXI VCTCGAGB 1 cut(s) 1047
PsrI GAACNNNNNNTAC 2 cut(s) 322, 354
PstI CTGCAG 2 cut(s) 169, 2104
PstNI CAGNNNCTG 1 cut(s) 1993
PsuI RGATCY 1 cut(s) 1402
RsaI GTAC 4 cut(s) 331, 1138, 2085, 2181
RsaNI GTAC 4 cut(s) 330, 1137, 2084, 2180
Rsr2I CGGWCCG 1 cut(s) 277
RsrII CGGWCCG 1 cut(s) 277
SatI GCNGC 3 cut(s) 165, 1758, 2100
Sau96I GGNCC 7 cut(s) 277, 498, 631, 688, 1445, 2011, 2251
SchI GAGTC 3 cut(s) 884, 1048, 1207
ScrFI CCNGG 8 cut(s) 55, 226, 275, 501, 635, 692, 888, 2147
SduI GDGCHC 3 cut(s) 1151, 1597, 1877
SexAI ACCWGGT 1 cut(s) 886
SfaNI GCATC 6 cut(s) 229, 250, 442, 1495, 1554, 1882
SfcI CTRYAG 3 cut(s) 165, 580, 2100
Sfr274I CTCGAG 1 cut(s) 1047
SinI GGWCC 3 cut(s) 277, 1445, 2251
SlaI CTCGAG 1 cut(s) 1047
SmlI CTYRAG 3 cut(s) 1047, 1397, 1712
SmoI CTYRAG 3 cut(s) 1047, 1397, 1712
SpeI ACTAGT 1 cut(s) 2086
SphI GCATGC 1 cut(s) 2270
SsiI CCGC 2 cut(s) 985, 1618
SspMI CTAG 6 cut(s) 98, 828, 1635, 1733, 2087, 2111
StyD4I CCNGG 8 cut(s) 53, 224, 273, 499, 633, 690, 886, 2145
TaaI ACNGT 7 cut(s) 334, 940, 1209, 1673, 1799, 1879, 2217
TaiI ACGT 1 cut(s) 409
TaqI TCGA 4 cut(s) 547, 1035, 1048, 1345
TaqII GACCGA 1 cut(s) 1767
TatI WGTACW 1 cut(s) 2179
TfiI GAWTC 5 cut(s) 146, 1365, 1546, 1856, 2194
TscAI CASTG 8 cut(s) 51, 67, 139, 933, 1212, 1597, 1678, 1866
TseFI GTSAC 5 cut(s) 154, 300, 1074, 1199, 2121
TseI GCWGC 3 cut(s) 164, 1757, 2099
Tsp45I GTSAC 5 cut(s) 154, 300, 1074, 1199, 2121
TspDTI ATGAA 7 cut(s) 84, 1275, 1293, 1326, 1857, 1967, 2131
TspGWI ACGGA 1 cut(s) 1919
TspRI CASTG 8 cut(s) 51, 67, 139, 933, 1212, 1597, 1678, 1866
Van91I CCANNNNNTGG 1 cut(s) 965
VneI GTGCAC 1 cut(s) 1873
VpaK11BI GGWCC 3 cut(s) 277, 1445, 2251
VspI ATTAAT 1 cut(s) 1707
XapI RAATTY 1 cut(s) 1169
XceI RCATGY 2 cut(s) 1381, 2270
XhoI CTCGAG 1 cut(s) 1047
XmnI GAANNNNTTC 2 cut(s) 1364, 1767
XspI CTAG 6 cut(s) 98, 828, 1635, 1733, 2087, 2111
Zsp2I ATGCAT 1 cut(s) 1645
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.