Prupe.7G157400_v2.0.a1

Soluble inorganic

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0016505
Physical Location & Seq
Forward (+)
16554836 .. 16558422
3587 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G157400.1

Sequence Viewer

Length: 645 bp
ATGGCTAACAGTGGTGGAGAAGGGAGTGGAAAGAATTCAGGATTTCCTCATGTTGTCCTCAATGAAAGGATCCTTTCTTCAATGTCACGGAGATCGGTTGCTGCTCATCCCTGGCATGACTTAGAGATTGGACCTGGTGCGCCAGCAGTATTCAACGCTGTTGTTGAAATTAGCAAAGGCAGCAAGGTTAAGTACGAGCTCGACAAGACAACTGGCCTCATTAAAGTTGATCGTGTTCTTTACTCATCAGTTGTTTATCCACACAACTATGGTTTCATTCCCCGAACCATCTGTGAGGATAGTGATCCTATGGATGTACTGGTGCTGATGCAGGAGCCCGTCTTACCTGGTTCTTTTCTTCGTGCTCGTGCTATTGGATTAATGCCCATGATTGATCAAGGTGAAAAGGATGACAAAATTATTGCAGTATGTGCTGATGACCCTGAGTTCCGCCACACCAAGGACATCAAGGATCTTCCTCCCCATCGCCTTGCAGAAATTCGTCGATTCTTTGAGGACTACAAGAAGAATGAGAACAAGGAAGTGGCTGTCGAAGACTTTCTACCTGCTGAGGCTGCCATCGATGCCATCAAATACTCCATGGACCTGTATGCATCTTACATTGTGGAAAGCTTGAGGCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004427 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko00190 map00190
Pfam Domains
Protein Families
Pyrophosphatase

Protein Analysis

215

Amino Acids

23.91

Weight (kDa)

5.41

Isoelectric Point (pI)

41.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016505)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G18230
fragaria_vesca FvH4_1g12970 FvH4_1g12970
malus_domestica MD02G1144200.v1.1
prunus_persica Prupe.7G157400_v2.0.a1
pyrus_communis pycom02g11410
rosa_chinensis RchiOBHm_Chr2g0101021
rosa_laevigata RLG00000017038
rosa_roxburghii Rroxscaffold_2G00141630
rosa_rugosa Rorug02G0095400
rosa_samantha Rh2BG147700 Rh2CG148900 Rh2DG148200
rosa_wichuraiana Rw2G011190

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 574
AciI CCGC 1 cut(s) 451
AclWI GGATC 4 cut(s) 64, 77, 299, 480
AcsI RAATTY 2 cut(s) 34, 498
AfaI GTAC 2 cut(s) 194, 318
AfiI CCNNNNNNNGG 1 cut(s) 460
AgsI TTSAA 3 cut(s) 81, 154, 167
AjnI CCWGG 3 cut(s) 110, 133, 346
AluBI AGCT 2 cut(s) 199, 633
AluI AGCT 2 cut(s) 199, 633
Alw21I GWGCWC 2 cut(s) 201, 367
AlwI GGATC 4 cut(s) 64, 77, 299, 480
AoxI GGCC 1 cut(s) 214
ApeKI GCWGC 3 cut(s) 101, 180, 575
ApoI RAATTY 2 cut(s) 34, 498
AseI ATTAAT 1 cut(s) 380
Asp700I GAANNNNTTC 2 cut(s) 34, 558
AspLEI GCGC 1 cut(s) 142
AspS9I GGNCC 2 cut(s) 131, 604
AsuHPI GGTGA 1 cut(s) 413
AvaII GGWCC 2 cut(s) 131, 604
BamHI GGATCC 1 cut(s) 69
BanII GRGCYC 2 cut(s) 201, 339
BarI GAAGNNNNNNTAC 2 cut(s) 546, 578
BauI CACGAG 1 cut(s) 366
BbsI GAAGAC 1 cut(s) 561
Bbv12I GWGCWC 2 cut(s) 201, 367
BbvCI CCTCAGC 1 cut(s) 570
BbvI GCAGC 3 cut(s) 88, 192, 562
BccI CCATC 4 cut(s) 296, 492, 587, 596
BciT130I CCWGG 3 cut(s) 112, 135, 348
BclI TGATCA 1 cut(s) 394
BfuAI ACCTGC 1 cut(s) 574
BisI GCNGC 3 cut(s) 102, 181, 576
BlsI GCNGC 3 cut(s) 103, 182, 577
Bme1390I CCNGG 3 cut(s) 112, 135, 348
Bme18I GGWCC 2 cut(s) 131, 604
BmgT120I GGNCC 2 cut(s) 131, 604
BmiI GGNNCC 2 cut(s) 71, 336
BmrFI CCNGG 3 cut(s) 112, 135, 348
BmsI GCATC 3 cut(s) 318, 574, 623
BpiI GAAGAC 1 cut(s) 561
Bpu10I CCTNAGC 1 cut(s) 570
Bsa29I ATCGAT 1 cut(s) 582
BsaBI GATNNNNATC 1 cut(s) 303
BsaJI CCNNGG 3 cut(s) 110, 459, 600
Bsc4I CCNNNNNNNGG 1 cut(s) 460
Bse1I ACTGG 2 cut(s) 217, 324
Bse8I GATNNNNATC 1 cut(s) 303
BseBI CCWGG 3 cut(s) 112, 135, 348
BseCI ATCGAT 1 cut(s) 582
BseDI CCNNGG 3 cut(s) 110, 459, 600
BseGI GGATG 3 cut(s) 106, 319, 415
BseJI GATNNNNATC 1 cut(s) 303
BseLI CCNNNNNNNGG 1 cut(s) 460
BseMII CTCAG 2 cut(s) 435, 561
BseNI ACTGG 2 cut(s) 217, 324
BseXI GCAGC 3 cut(s) 88, 192, 562
BshFI GGCC 1 cut(s) 216
BshVI ATCGAT 1 cut(s) 582
BsiHKAI GWGCWC 2 cut(s) 201, 367
BslI CCNNNNNNNGG 1 cut(s) 460
BsnI GGCC 1 cut(s) 216
Bsp1286I GDGCHC 3 cut(s) 201, 339, 367
Bsp143I GATC 6 cut(s) 69, 92, 229, 304, 394, 472
Bsp19I CCATGG 1 cut(s) 600
BspACI CCGC 1 cut(s) 451
BspANI GGCC 1 cut(s) 216
BspCNI CTCAG 2 cut(s) 436, 562
BspDI ATCGAT 1 cut(s) 582
BspLI GGNNCC 2 cut(s) 71, 336
BspMI ACCTGC 1 cut(s) 574
BspPI GGATC 4 cut(s) 64, 77, 299, 480
BsrI ACTGG 2 cut(s) 217, 324
BssECI CCNNGG 3 cut(s) 110, 459, 600
BssMI GATC 6 cut(s) 69, 92, 229, 304, 394, 472
BssSI CACGAG 1 cut(s) 366
BssT1I CCWWGG 2 cut(s) 459, 600
Bst2BI CACGAG 1 cut(s) 366
Bst2UI CCWGG 3 cut(s) 112, 135, 348
Bst4CI ACNGT 1 cut(s) 11
BstAPI GCANNNNNTGC 1 cut(s) 431
BstC8I GCNNGC 1 cut(s) 144
BstDEI CTNAG 3 cut(s) 121, 444, 570
BstDSI CCRYGG 1 cut(s) 600
BstF5I GGATG 3 cut(s) 106, 319, 415
BstHHI GCGC 1 cut(s) 142
BstKTI GATC 6 cut(s) 72, 95, 232, 307, 397, 475
BstMBI GATC 6 cut(s) 69, 92, 229, 304, 394, 472
BstMWI GCNNNNNNNGC 4 cut(s) 180, 431, 575, 584
BstNI CCWGG 3 cut(s) 112, 135, 348
BstSCI CCNGG 3 cut(s) 110, 133, 346
BstV1I GCAGC 3 cut(s) 88, 192, 562
BstV2I GAAGAC 1 cut(s) 561
BstX2I RGATCY 2 cut(s) 69, 472
BstYI RGATCY 2 cut(s) 69, 472
Bsu15I ATCGAT 1 cut(s) 582
BsuRI GGCC 1 cut(s) 216
BsuTUI ATCGAT 1 cut(s) 582
BtgI CCRYGG 1 cut(s) 600
BtgZI GCGATG 1 cut(s) 470
BtsCI GGATG 3 cut(s) 106, 319, 415
BtsIMutI CAGTG 1 cut(s) 16
BveI ACCTGC 1 cut(s) 574
Cac8I GCNNGC 1 cut(s) 144
CfoI GCGC 1 cut(s) 142
Cfr13I GGNCC 2 cut(s) 131, 604
ClaI ATCGAT 1 cut(s) 582
CsiI ACCWGGT 2 cut(s) 133, 346
Csp6I GTAC 2 cut(s) 193, 317
CviAII CATG 4 cut(s) 50, 116, 388, 601
CviJI RGCY 7 cut(s) 5, 199, 216, 337, 548, 575, 633
CviKI_1 RGCY 7 cut(s) 5, 199, 216, 337, 548, 575, 633
CviQI GTAC 2 cut(s) 193, 317
DdeI CTNAG 3 cut(s) 121, 444, 570
DpnI GATC 6 cut(s) 71, 94, 231, 306, 396, 474
DpnII GATC 6 cut(s) 69, 92, 229, 304, 394, 472
EciI GGCGGA 1 cut(s) 440
Ecl136II GAGCTC 1 cut(s) 199
Eco130I CCWWGG 2 cut(s) 459, 600
Eco24I GRGCYC 2 cut(s) 201, 339
Eco47I GGWCC 2 cut(s) 131, 604
Eco53kI GAGCTC 1 cut(s) 199
EcoICRI GAGCTC 1 cut(s) 199
EcoRI GAATTC 1 cut(s) 34
EcoRII CCWGG 3 cut(s) 110, 133, 346
EcoT14I CCWWGG 2 cut(s) 459, 600
EcoT22I ATGCAT 1 cut(s) 616
EcoT38I GRGCYC 2 cut(s) 201, 339
ErhI CCWWGG 2 cut(s) 459, 600
FaeI CATG 4 cut(s) 53, 119, 391, 604
FaiI YATR 8 cut(s) 51, 117, 270, 311, 389, 430, 602, 612
FatI CATG 4 cut(s) 49, 115, 387, 600
FbaI TGATCA 1 cut(s) 394
Fnu4HI GCNGC 3 cut(s) 102, 181, 576
FokI GGATG 3 cut(s) 93, 326, 422
FriOI GRGCYC 2 cut(s) 201, 339
Fsp4HI GCNGC 3 cut(s) 102, 181, 576
GlaI GCGC 1 cut(s) 141
GluI GCNGC 3 cut(s) 102, 181, 576
HaeIII GGCC 1 cut(s) 216
HhaI GCGC 1 cut(s) 142
Hin1II CATG 4 cut(s) 53, 119, 391, 604
Hin6I GCGC 1 cut(s) 140
HinP1I GCGC 1 cut(s) 140
HindIII AAGCTT 1 cut(s) 631
HinfI GANTC 1 cut(s) 507
HphI GGTGA 1 cut(s) 413
Hpy188III TCNNGA 1 cut(s) 39
Hpy99I CGWCG 1 cut(s) 507
HpyAV CCTTC 1 cut(s) 14
HpyCH4III ACNGT 1 cut(s) 11
HpyCH4V TGCA 4 cut(s) 331, 425, 494, 614
HpyF10VI GCNNNNNNNGC 4 cut(s) 180, 431, 575, 584
HpyF3I CTNAG 3 cut(s) 121, 444, 570
Hsp92II CATG 4 cut(s) 53, 119, 391, 604
HspAI GCGC 1 cut(s) 140
Ksp22I TGATCA 1 cut(s) 394
Kzo9I GATC 6 cut(s) 69, 92, 229, 304, 394, 472
LmnI GCTCC 1 cut(s) 334
Lsp1109I GCAGC 3 cut(s) 88, 192, 562
LweI GCATC 3 cut(s) 318, 574, 623
MabI ACCWGGT 2 cut(s) 133, 346
MaeIII GTNAC 1 cut(s) 84
MalI GATC 6 cut(s) 71, 94, 231, 306, 396, 474
MboI GATC 6 cut(s) 69, 92, 229, 304, 394, 472
MboII GAAGA 5 cut(s) 69, 350, 467, 538, 566
MflI RGATCY 2 cut(s) 69, 472
MhlI GDGCHC 3 cut(s) 201, 339, 367
MluCI AATT 4 cut(s) 34, 168, 417, 498
MnlI CCTC 8 cut(s) 57, 68, 227, 289, 489, 508, 565, 630
Mph1103I ATGCAT 1 cut(s) 616
MroXI GAANNNNTTC 2 cut(s) 34, 558
MseI TTAA 3 cut(s) 189, 222, 380
MslI CAYNNNNRTG 1 cut(s) 267
MspR9I CCNGG 3 cut(s) 112, 135, 348
MvaI CCWGG 3 cut(s) 112, 135, 348
MwoI GCNNNNNNNGC 4 cut(s) 180, 431, 575, 584
NcoI CCATGG 1 cut(s) 600
NdeII GATC 6 cut(s) 69, 92, 229, 304, 394, 472
NlaIII CATG 4 cut(s) 53, 119, 391, 604
NlaIV GGNNCC 2 cut(s) 71, 336
NmuCI GTSAC 1 cut(s) 84
NsiI ATGCAT 1 cut(s) 616
PdmI GAANNNNTTC 2 cut(s) 34, 558
PfeI GAWTC 1 cut(s) 507
PkrI GCNGC 3 cut(s) 103, 182, 577
PshBI ATTAAT 1 cut(s) 380
Psp124BI GAGCTC 1 cut(s) 201
Psp6I CCWGG 3 cut(s) 110, 133, 346
PspGI CCWGG 3 cut(s) 110, 133, 346
PspN4I GGNNCC 2 cut(s) 71, 336
PspPI GGNCC 2 cut(s) 131, 604
PsuI RGATCY 2 cut(s) 69, 472
RsaI GTAC 2 cut(s) 194, 318
RsaNI GTAC 2 cut(s) 193, 317
RseI CAYNNNNRTG 1 cut(s) 267
SacI GAGCTC 1 cut(s) 201
SaqAI TTAA 3 cut(s) 189, 222, 380
SatI GCNGC 3 cut(s) 102, 181, 576
Sau3AI GATC 6 cut(s) 69, 92, 229, 304, 394, 472
Sau96I GGNCC 2 cut(s) 131, 604
ScrFI CCNGG 3 cut(s) 112, 135, 348
SduI GDGCHC 3 cut(s) 201, 339, 367
SetI ASST 8 cut(s) 136, 189, 201, 349, 403, 568, 609, 635
SexAI ACCWGGT 2 cut(s) 133, 346
SfaNI GCATC 3 cut(s) 318, 574, 623
SinI GGWCC 2 cut(s) 131, 604
SmiMI CAYNNNNRTG 1 cut(s) 267
SmlI CTYRAG 1 cut(s) 634
SmoI CTYRAG 1 cut(s) 634
Sse9I AATT 4 cut(s) 34, 168, 417, 498
SsiI CCGC 1 cut(s) 451
SstI GAGCTC 1 cut(s) 201
StyD4I CCNGG 3 cut(s) 110, 133, 346
StyI CCWWGG 2 cut(s) 459, 600
TaaI ACNGT 1 cut(s) 11
TaqI TCGA 4 cut(s) 201, 505, 552, 582
TasI AATT 4 cut(s) 34, 168, 417, 498
TatI WGTACW 1 cut(s) 316
TfiI GAWTC 1 cut(s) 507
Tru1I TTAA 3 cut(s) 189, 222, 380
Tru9I TTAA 3 cut(s) 189, 222, 380
TscAI CASTG 1 cut(s) 16
TseFI GTSAC 1 cut(s) 84
TseI GCWGC 3 cut(s) 101, 180, 575
Tsp45I GTSAC 1 cut(s) 84
TspDTI ATGAA 2 cut(s) 78, 265
TspGWI ACGGA 1 cut(s) 103
TspRI CASTG 1 cut(s) 16
VpaK11BI GGWCC 2 cut(s) 131, 604
VspI ATTAAT 1 cut(s) 380
XapI RAATTY 2 cut(s) 34, 498
XmnI GAANNNNTTC 2 cut(s) 34, 558
Zsp2I ATGCAT 1 cut(s) 616
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.