Prupe.7G158400_v2.0.a1

SAM dependent carboxyl methyltransferase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
16604631 .. 16611435
6805 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G158400.2

Sequence Viewer

Length: 1086 bp
ATGGATGTAGAGAAAGTCTTCCACATGAAGGGAGGGGTTGGCCATACTAGCTATGCAAGAAATTCTTCACTTCAGAAGGAGGTTTCTGATATGGTGAAGGACATAACATTAGAGGCAATACAAGAACTTTACCTCACCACAACTCCAAAGAGCTTAGGCATAGCTGACTTGGGTTGTTCATCTGGCCCCAACACCCTATCAATTATCAAAGACATCATTGAAGCAGTCCAAAGGACAAGTAGAAAAATCTTTCACCCAACACCAGAGTTCAGAGTGTACCTTAATGATCTTCCATCCAATGACTTCAACTCCATCTTCAAGGCCTTGCCAGACTTCTCTAAAGGCCTCAGCAAAGAAAGAAATGATGGGTCTGCCCCCATTTATATAGGAGGCTATCCAGGCTCATTTTATGGAAGACTTTTTCCCAACAATTCCTTGCACTTTGTCTACTCATCCTGCAGTTTACACTGGCTGTCTAGAGTTCCTCCAGCCATCTATGAGCAGGGGAAGTCAATAAACAAAGGAAGTGTTCACATTTCTGAATCAAGCCCTCCTGGAGTGTCTCAAGCTTACCTGAAGCAATTTCAAGAAGACTTCACTTTGTTCCTTAAGTCAAGGTCTGAGGAGTTGACTGTAGGAGGAAGAATGGTGTTGATCTTGCTGGGAAGGAGAGGCCCTGATCATGTTGACAGAGGCAACTCTTTCTTCTGGGAGCTTCTCTCTCAGTCCGTTGCCATTTTGGTTTCCAAGGGAGAAGTGGAGGAGGAAAAGCTTGATTCATATGATGTGCATTTCTATGCTCCATCCAGAGATGAAATAGAAGATGAAGTGAGGAAAGAGGGTTCTTTTGAATTGGACAGGTTGGAGGTGCTAGAGCTGGATCAGAGAGGGGACAAGCATAATGAGAGCTATGGAACAAGTTGTGCAAGGACTGTGAGGGCTATTCAAGAATCAATGATTGCCAAGCATTTTGGAGAAAAACTCTTGGACAGTTTGTTTGAGACTTATGGAAGATTGATTGATGAGGAATCTGCCAAAGGAGACATTAACCCCATCAGTTTTGGGATTGTACTTAGAAAATTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

362

Amino Acids

40.53

Weight (kDa)

5.56

Isoelectric Point (pI)

42.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016697)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G36470
fragaria_vesca FvH4_1g12770
malus_domestica MD15G1256500.v1.1
prunus_persica Prupe.7G158400_v2.0.a1 Prupe.7G158400_v2.0.a1
pyrus_communis pycom02g11320 pycom15g22440
rosa_chinensis RchiOBHm_Chr2g0100891
rosa_laevigata RLG00000017021
rosa_multiflora Rmu_sc0001659.1_g000045
rosa_roxburghii Rroxscaffold_2G00141760
rosa_rugosa Rorug02G0093400
rosa_samantha Rh2BG146100
rosa_wichuraiana Rw2G011060

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 447
AclWI GGATC 1 cut(s) 888
AcoI YGGCCR 1 cut(s) 40
AcsI RAATTY 1 cut(s) 61
AcuI CTGAAG 2 cut(s) 56, 596
AfaI GTAC 2 cut(s) 278, 1071
AfiI CCNNNNNNNGG 1 cut(s) 28
AflII CTTAAG 1 cut(s) 608
AgsI TTSAA 6 cut(s) 221, 307, 319, 587, 851, 947
AjnI CCWGG 2 cut(s) 397, 553
AloI GAACNNNNNNTCC 2 cut(s) 826, 858
AluBI AGCT 8 cut(s) 51, 153, 164, 569, 715, 772, 877, 909
AluI AGCT 8 cut(s) 51, 153, 164, 569, 715, 772, 877, 909
Alw26I GTCTC 3 cut(s) 567, 995, 1035
AlwI GGATC 1 cut(s) 888
AoxI GGCC 5 cut(s) 40, 184, 321, 343, 673
ApoI RAATTY 1 cut(s) 61
ArsI GACNNNNNNTTYG 2 cut(s) 980, 1012
Asp700I GAANNNNTTC 2 cut(s) 17, 64
AspS9I GGNCC 2 cut(s) 185, 674
AsuHPI GGTGA 3 cut(s) 106, 127, 245
BalI TGGCCA 1 cut(s) 42
BbsI GAAGAC 3 cut(s) 10, 421, 597
BbvCI CCTCAGC 1 cut(s) 347
BccI CCATC 6 cut(s) 301, 320, 359, 500, 811, 1061
BciT130I CCWGG 2 cut(s) 399, 555
BclI TGATCA 1 cut(s) 679
BcoDI GTCTC 3 cut(s) 567, 995, 1035
BfaI CTAG 3 cut(s) 48, 477, 872
BfmI CTRYAG 2 cut(s) 457, 633
BfrI CTTAAG 1 cut(s) 608
Bme1390I CCNGG 2 cut(s) 399, 555
BmgT120I GGNCC 2 cut(s) 185, 674
BmiI GGNNCC 1 cut(s) 187
BmrFI CCNGG 2 cut(s) 399, 555
BpiI GAAGAC 3 cut(s) 10, 421, 597
BplI GAGNNNNNCTC 4 cut(s) 704, 736, 966, 998
BpmI CTGGAG 2 cut(s) 471, 576
Bpu10I CCTNAGC 2 cut(s) 154, 347
BpuEI CTTGAG 1 cut(s) 549
BsaJI CCNNGG 1 cut(s) 747
BsaXI ACNNNNNCTCC 4 cut(s) 127, 157, 293, 323
Bsc4I CCNNNNNNNGG 1 cut(s) 28
Bse1I ACTGG 1 cut(s) 473
BseBI CCWGG 2 cut(s) 399, 555
BseDI CCNNGG 1 cut(s) 747
BseGI GGATG 4 cut(s) 10, 293, 452, 803
BseLI CCNNNNNNNGG 1 cut(s) 28
BseMII CTCAG 3 cut(s) 361, 612, 737
BseNI ACTGG 1 cut(s) 473
BseRI GAGGAG 2 cut(s) 638, 776
BseYI CCCAGC 1 cut(s) 661
BshFI GGCC 5 cut(s) 42, 186, 323, 345, 675
BslFI GGGAC 1 cut(s) 905
BslI CCNNNNNNNGG 1 cut(s) 28
BsmAI GTCTC 3 cut(s) 567, 995, 1035
BsmFI GGGAC 1 cut(s) 905
BsnI GGCC 5 cut(s) 42, 186, 323, 345, 675
Bsp143I GATC 4 cut(s) 286, 654, 679, 880
BspANI GGCC 5 cut(s) 42, 186, 323, 345, 675
BspCNI CTCAG 3 cut(s) 360, 613, 736
BspLI GGNNCC 1 cut(s) 187
BspMAI CTGCAG 1 cut(s) 461
BspPI GGATC 1 cut(s) 888
BspTI CTTAAG 1 cut(s) 608
BsrI ACTGG 1 cut(s) 473
BssECI CCNNGG 1 cut(s) 747
BssMI GATC 4 cut(s) 286, 654, 679, 880
BssT1I CCWWGG 1 cut(s) 747
Bst2UI CCWGG 2 cut(s) 399, 555
Bst4CI ACNGT 3 cut(s) 634, 934, 992
BstAFI CTTAAG 1 cut(s) 608
BstDEI CTNAG 5 cut(s) 154, 347, 621, 723, 1073
BstF5I GGATG 4 cut(s) 10, 293, 452, 803
BstKTI GATC 4 cut(s) 289, 657, 682, 883
BstMAI GTCTC 3 cut(s) 567, 995, 1035
BstMBI GATC 4 cut(s) 286, 654, 679, 880
BstMWI GCNNNNNNNGC 2 cut(s) 48, 399
BstNI CCWGG 2 cut(s) 399, 555
BstSCI CCNGG 2 cut(s) 397, 553
BstSFI CTRYAG 2 cut(s) 457, 633
BstV2I GAAGAC 3 cut(s) 10, 421, 597
BsuRI GGCC 5 cut(s) 42, 186, 323, 345, 675
BtsCI GGATG 4 cut(s) 10, 293, 452, 803
BtsIMutI CAGTG 1 cut(s) 466
Cfr13I GGNCC 2 cut(s) 185, 674
Csp6I GTAC 2 cut(s) 277, 1070
CviAII CATG 2 cut(s) 25, 683
CviQI GTAC 2 cut(s) 277, 1070
DdeI CTNAG 5 cut(s) 154, 347, 621, 723, 1073
DpnI GATC 4 cut(s) 288, 656, 681, 882
DpnII GATC 4 cut(s) 286, 654, 679, 880
EaeI YGGCCR 1 cut(s) 40
Eco130I CCWWGG 1 cut(s) 747
Eco147I AGGCCT 2 cut(s) 323, 345
Eco57I CTGAAG 2 cut(s) 56, 596
EcoO109I RGGNCCY 1 cut(s) 674
EcoRII CCWGG 2 cut(s) 397, 553
EcoT14I CCWWGG 1 cut(s) 747
ErhI CCWWGG 1 cut(s) 747
FaeI CATG 2 cut(s) 28, 686
FalI AAGNNNNNCTT 2 cut(s) 49, 81
FaqI GGGAC 1 cut(s) 905
FatI CATG 2 cut(s) 24, 682
FauNDI CATATG 1 cut(s) 781
FbaI TGATCA 1 cut(s) 679
FblI GTMKAC 1 cut(s) 447
FokI GGATG 4 cut(s) 17, 280, 439, 790
FspBI CTAG 3 cut(s) 48, 477, 872
GsaI CCCAGC 1 cut(s) 665
GsuI CTGGAG 2 cut(s) 471, 576
HaeIII GGCC 5 cut(s) 42, 186, 323, 345, 675
Hin1II CATG 2 cut(s) 28, 686
HincII GTYRAC 2 cut(s) 630, 688
HindII GTYRAC 2 cut(s) 630, 688
HindIII AAGCTT 2 cut(s) 567, 770
HinfI GANTC 4 cut(s) 542, 776, 950, 1028
HphI GGTGA 3 cut(s) 106, 127, 245
Hpy166II GTNNAC 6 cut(s) 277, 448, 464, 532, 630, 688
Hpy188I TCNGA 6 cut(s) 75, 88, 272, 541, 622, 885
Hpy188III TCNNGA 4 cut(s) 477, 587, 807, 947
Hpy8I GTNNAC 6 cut(s) 277, 448, 464, 532, 630, 688
HpyAV CCTTC 4 cut(s) 22, 70, 91, 660
HpyCH4III ACNGT 3 cut(s) 634, 934, 992
HpyCH4V TGCA 5 cut(s) 56, 439, 459, 790, 926
HpyF10VI GCNNNNNNNGC 2 cut(s) 48, 399
HpyF3I CTNAG 5 cut(s) 154, 347, 621, 723, 1073
Hsp92II CATG 2 cut(s) 28, 686
Ksp22I TGATCA 1 cut(s) 679
Kzo9I GATC 4 cut(s) 286, 654, 679, 880
LmnI GCTCC 2 cut(s) 712, 805
MaeI CTAG 3 cut(s) 48, 477, 872
MalI GATC 4 cut(s) 288, 656, 681, 882
MboI GATC 4 cut(s) 286, 654, 679, 880
MlsI TGGCCA 1 cut(s) 42
MluCI AATT 6 cut(s) 61, 201, 430, 581, 851, 1079
MluNI TGGCCA 1 cut(s) 42
MmeI TCCRAC 1 cut(s) 843
Mox20I TGGCCA 1 cut(s) 42
MroXI GAANNNNTTC 2 cut(s) 17, 64
MscI TGGCCA 1 cut(s) 42
MseI TTAA 3 cut(s) 282, 609, 1047
MslI CAYNNNNRTG 1 cut(s) 795
Msp20I TGGCCA 1 cut(s) 42
MspCI CTTAAG 1 cut(s) 608
MspR9I CCNGG 2 cut(s) 399, 555
MvaI CCWGG 2 cut(s) 399, 555
MwoI GCNNNNNNNGC 2 cut(s) 48, 399
NdeI CATATG 1 cut(s) 781
NdeII GATC 4 cut(s) 286, 654, 679, 880
NlaIII CATG 2 cut(s) 28, 686
NlaIV GGNNCC 1 cut(s) 187
PceI AGGCCT 2 cut(s) 323, 345
PdmI GAANNNNTTC 2 cut(s) 17, 64
PfeI GAWTC 4 cut(s) 542, 776, 950, 1028
PfoI TCCNGGA 1 cut(s) 553
Psp6I CCWGG 2 cut(s) 397, 553
PspFI CCCAGC 1 cut(s) 661
PspGI CCWGG 2 cut(s) 397, 553
PspN4I GGNNCC 1 cut(s) 187
PspPI GGNCC 2 cut(s) 185, 674
PstI CTGCAG 1 cut(s) 461
RsaI GTAC 2 cut(s) 278, 1071
RsaNI GTAC 2 cut(s) 277, 1070
RseI CAYNNNNRTG 1 cut(s) 795
SaqAI TTAA 3 cut(s) 282, 609, 1047
Sau3AI GATC 4 cut(s) 286, 654, 679, 880
Sau96I GGNCC 2 cut(s) 185, 674
ScrFI CCNGG 2 cut(s) 399, 555
SfcI CTRYAG 2 cut(s) 457, 633
SmiMI CAYNNNNRTG 1 cut(s) 795
SmlI CTYRAG 2 cut(s) 564, 608
SmoI CTYRAG 2 cut(s) 564, 608
Sse9I AATT 6 cut(s) 61, 201, 430, 581, 851, 1079
SseBI AGGCCT 2 cut(s) 323, 345
SspMI CTAG 3 cut(s) 48, 477, 872
StuI AGGCCT 2 cut(s) 323, 345
StyD4I CCNGG 2 cut(s) 397, 553
StyI CCWWGG 1 cut(s) 747
TaaI ACNGT 3 cut(s) 634, 934, 992
TasI AATT 6 cut(s) 61, 201, 430, 581, 851, 1079
TatI WGTACW 1 cut(s) 1069
TfiI GAWTC 4 cut(s) 542, 776, 950, 1028
Tru1I TTAA 3 cut(s) 282, 609, 1047
Tru9I TTAA 3 cut(s) 282, 609, 1047
TscAI CASTG 1 cut(s) 473
TspDTI ATGAA 5 cut(s) 41, 168, 768, 828, 840
TspGWI ACGGA 1 cut(s) 718
TspRI CASTG 1 cut(s) 473
Vha464I CTTAAG 1 cut(s) 608
XapI RAATTY 1 cut(s) 61
XbaI TCTAGA 1 cut(s) 476
XcmI CCANNNNNNNNNTGG 1 cut(s) 754
XmiI GTMKAC 1 cut(s) 447
XmnI GAANNNNTTC 2 cut(s) 17, 64
XspI CTAG 3 cut(s) 48, 477, 872
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.