Prupe.7G158900_v2.0.a1

Belongs to the AAA ATPase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
16622073 .. 16624962
2890 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G158900.2

Sequence Viewer

Length: 1494 bp
ATGGCCTCATCATCTTCTGCTGAAACCAAACTGGCCACAGCCAAGACAGTTCTTTCAACAGCAGCCTCTGTGGCTGCCACAGCAATGTTGGTAAGGTCAATAGCCCAAGATTTCCTCCCCCATGAGATCCAACACTACTTCTTCTCTGGCATCAGCAGCTTCTTCTCTCGCTTCTCCTCCCAACTCACCATGGTCATTGAAGAGTTCGATGGCCTTGTCAACAACCAAATATATGAGGCTGCAGAAATCTACTTGGGCAGCAAAGTCTCCCCATCAACACACAGAATCAAAGTCAGCAAACCCGAGAAGGAAAACAACTTCACCATCACAATGGAAAGCAATCAGGAGATTGTGGATGTCTTTAATGGGATTAAGTTCAATTGGATCTTGGTCTCCAGGCAGGTTGAGTCGAACTTCCACAACCCTCGTGATCTAAACTCCACACTGAGATCAGAAGTGAGATCCTTTGAGCTCAGCTTCCACAAGAAACAAAGAGACTTGGTGCTAAACTCTTACCTCCCTCACATTGTTAAACAATCAAAGTCCATGAAGCAAGAAAAGAAGACCCTGAAAATCTTCACGGTTGACTATCAGAACATGTACTGCAACATAGCAGAAGCATGGATCCCCACAAACCTCGATCACCCGGCAACGTTCGAAACCCTGGCTTTGGACTCGGACATCAAAAGCTTCATTCTTCACGACCTTGAGAGGTTCATAAAGAGGAAGGAGTATTATAGAAAAGTTGGCAAGGCTTGGAAGAGAGGGTATTTGTTGTATGGCCCACCAGGGACAGGGAAGTCAAGCTTGATTGCTGCAATGGCCAATCACTTGAACTTTGATATCTATGACTTGGAACTCACTGAGTTGAATAACAACTCGGAGCTTAGGAGGTTGTTGGTTGCCATGGCTAATAGGTCTATATTGGTAGTGGAGGATATTGACTGCACCATTGAGTTTCAAGATCGAATGGCTGAGTCTAGAGCTTTACACCCACATGGGTCCCAGGAGAAACAGGTGACACTATCAGGTTTGCTCAATTTCATTGATGGGCTGTGGTCAAGCTGTGGAGATGAGAGAATTATAGTGTTCACAACCAACCACAAGGAGAAGCTTGACCCTGCACTGTTGCGCCCTGGTCGCATGGATGTTCATGTCCACATGTCCTATTGCAGCCCATCTGGCTTTAGGCTTCTGGCAGCCAATTACCTTGGAATTAAAGACCACCTCTTGTTTGGGGAGATTGAGGAACAGATTGACATGACTAAAGTGACCCCTGCGGAAGTAGCTGAGCAACTGATCAAGAGTGATGAGCCTGGCATTGCACTGCAAGGCCTGATTGAGTTTCTGAAAGTGAAGAAGAAGGAGAATGAGGAAGCTGATGAGGAGGCTAAAAGGAAGCAAGCAGAAGTAGAAGCTAAAGAAGCTGAGGCTGAGGCTGGGATTAAGGACAAGAAATATGATAATGATGAAAAAAGTAGTGAGAAAAAGTAG

Protein Analysis

498

Amino Acids

56.5

Weight (kDa)

5.98

Isoelectric Point (pI)

46.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 799
Acc36I ACCTGC 1 cut(s) 391
AciI CCGC 1 cut(s) 1280
AclI AACGTT 1 cut(s) 653
AclWI GGATC 5 cut(s) 121, 392, 456, 619, 632
AcoI YGGCCR 2 cut(s) 33, 822
AfaI GTAC 1 cut(s) 602
AfiI CCNNNNNNNGG 2 cut(s) 670, 794
AflIII ACRYGT 2 cut(s) 597, 1161
AgsI TTSAA 6 cut(s) 57, 200, 379, 835, 871, 962
AjnI CCWGG 6 cut(s) 395, 663, 787, 1005, 1135, 1315
Alw21I GWGCWC 1 cut(s) 474
Alw26I GTCTC 3 cut(s) 271, 397, 489
AlwI GGATC 5 cut(s) 121, 392, 456, 619, 632
AlwNI CAGNNNCTG 1 cut(s) 68
Ama87I CYCGRG 1 cut(s) 302
AoxI GGCC 6 cut(s) 3, 33, 211, 781, 822, 1333
ApeKI GCWGC 8 cut(s) 62, 74, 156, 239, 258, 815, 1173, 1199
Asp700I GAANNNNTTC 1 cut(s) 575
AspLEI GCGC 1 cut(s) 1134
AspS9I GGNCC 2 cut(s) 782, 1002
AsuC2I CCSGG 1 cut(s) 647
AsuHPI GGTGA 4 cut(s) 178, 313, 635, 1030
AsuII TTCGAA 1 cut(s) 657
AvaI CYCGRG 1 cut(s) 302
AvaII GGWCC 1 cut(s) 1002
BalI TGGCCA 2 cut(s) 35, 824
BamHI GGATCC 1 cut(s) 624
BanII GRGCYC 1 cut(s) 474
BauI CACGAG 1 cut(s) 426
BbsI GAAGAC 1 cut(s) 569
Bbv12I GWGCWC 1 cut(s) 474
BbvCI CCTCAGC 2 cut(s) 1428, 1434
BbvI GCAGC 8 cut(s) 61, 74, 168, 226, 270, 802, 1185, 1211
BccI CCATC 5 cut(s) 203, 280, 332, 1043, 1186
BciT130I CCWGG 6 cut(s) 397, 665, 789, 1007, 1137, 1317
BclI TGATCA 1 cut(s) 1299
BcnI CCSGG 1 cut(s) 647
BcoDI GTCTC 3 cut(s) 271, 397, 489
BfaI CTAG 1 cut(s) 981
BfmI CTRYAG 1 cut(s) 240
BfuAI ACCTGC 1 cut(s) 391
BglI GCCNNNNNGGC 2 cut(s) 71, 1182
BisI GCNGC 8 cut(s) 63, 75, 157, 240, 259, 816, 1174, 1200
BlpI GCTNAGC 2 cut(s) 473, 1290
BlsI GCNGC 8 cut(s) 64, 76, 158, 241, 260, 817, 1175, 1201
Bme1390I CCNGG 7 cut(s) 397, 647, 665, 789, 1007, 1137, 1317
Bme18I GGWCC 1 cut(s) 1002
BmeT110I CYCGRG 1 cut(s) 302
BmgT120I GGNCC 2 cut(s) 782, 1002
BmiI GGNNCC 3 cut(s) 626, 1003, 1004
BmrFI CCNGG 7 cut(s) 397, 647, 665, 789, 1007, 1137, 1317
BmsI GCATC 1 cut(s) 159
BpiI GAAGAC 1 cut(s) 569
BpmI CTGGAG 1 cut(s) 379
Bpu10I CCTNAGC 3 cut(s) 887, 1428, 1434
Bpu1102I GCTNAGC 2 cut(s) 473, 1290
Bpu14I TTCGAA 1 cut(s) 657
BpuEI CTTGAG 1 cut(s) 728
BpuMI CCSGG 1 cut(s) 647
BsaI GGTCTC 1 cut(s) 397
BsaJI CCNNGG 7 cut(s) 189, 663, 788, 906, 1005, 1135, 1210
Bsc4I CCNNNNNNNGG 2 cut(s) 670, 794
Bse1I ACTGG 1 cut(s) 36
Bse3DI GCAATG 3 cut(s) 90, 825, 1320
BseBI CCWGG 6 cut(s) 397, 665, 789, 1007, 1137, 1317
BseDI CCNNGG 7 cut(s) 189, 663, 788, 906, 1005, 1135, 1210
BseGI GGATG 2 cut(s) 361, 1153
BseLI CCNNNNNNNGG 2 cut(s) 670, 794
BseMI GCAATG 3 cut(s) 90, 825, 1320
BseMII CTCAG 7 cut(s) 437, 487, 855, 966, 1281, 1419, 1425
BseNI ACTGG 1 cut(s) 36
BseRI GAGGAG 2 cut(s) 166, 1400
BseXI GCAGC 8 cut(s) 61, 74, 168, 226, 270, 802, 1185, 1211
BseYI CCCAGC 1 cut(s) 1439
BsgI GTGCAG 2 cut(s) 931, 1107
BshFI GGCC 6 cut(s) 5, 35, 213, 783, 824, 1335
BsiHKAI GWGCWC 1 cut(s) 474
BsiHKCI CYCGRG 1 cut(s) 302
BsiSI CCGG 1 cut(s) 647
BslFI GGGAC 2 cut(s) 805, 988
BslI CCNNNNNNNGG 2 cut(s) 670, 794
BsmAI GTCTC 3 cut(s) 271, 397, 489
BsmFI GGGAC 2 cut(s) 805, 988
BsnI GGCC 6 cut(s) 5, 35, 213, 783, 824, 1335
Bso31I GGTCTC 1 cut(s) 397
BsoBI CYCGRG 1 cut(s) 302
Bsp119I TTCGAA 1 cut(s) 657
Bsp1286I GDGCHC 1 cut(s) 474
Bsp143I GATC 9 cut(s) 126, 384, 430, 449, 461, 624, 640, 964, 1299
Bsp1720I GCTNAGC 2 cut(s) 473, 1290
Bsp19I CCATGG 2 cut(s) 189, 906
BspACI CCGC 1 cut(s) 1280
BspANI GGCC 6 cut(s) 5, 35, 213, 783, 824, 1335
BspCNI CTCAG 7 cut(s) 438, 486, 856, 967, 1282, 1420, 1426
BspLI GGNNCC 3 cut(s) 626, 1003, 1004
BspMAI CTGCAG 1 cut(s) 244
BspMI ACCTGC 1 cut(s) 391
BspPI GGATC 5 cut(s) 121, 392, 456, 619, 632
BspT104I TTCGAA 1 cut(s) 657
BspTNI GGTCTC 1 cut(s) 397
BsrDI GCAATG 3 cut(s) 90, 825, 1320
BsrI ACTGG 1 cut(s) 36
BssECI CCNNGG 7 cut(s) 189, 663, 788, 906, 1005, 1135, 1210
BssMI GATC 9 cut(s) 126, 384, 430, 449, 461, 624, 640, 964, 1299
BssSI CACGAG 1 cut(s) 426
BssT1I CCWWGG 3 cut(s) 189, 906, 1210
Bst2BI CACGAG 1 cut(s) 426
Bst2UI CCWGG 6 cut(s) 397, 665, 789, 1007, 1137, 1317
Bst4CI ACNGT 3 cut(s) 49, 583, 1128
Bst6I CTCTTC 2 cut(s) 195, 755
BstBI TTCGAA 1 cut(s) 657
BstC8I GCNNGC 1 cut(s) 1404
BstDEI CTNAG 8 cut(s) 446, 473, 864, 887, 975, 1290, 1428, 1434
BstDSI CCRYGG 2 cut(s) 189, 906
BstF5I GGATG 2 cut(s) 361, 1153
BstHHI GCGC 1 cut(s) 1134
BstKTI GATC 9 cut(s) 129, 387, 433, 452, 464, 627, 643, 967, 1302
BstMAI GTCTC 3 cut(s) 271, 397, 489
BstMBI GATC 9 cut(s) 126, 384, 430, 449, 461, 624, 640, 964, 1299
BstMWI GCNNNNNNNGC 8 cut(s) 71, 80, 156, 821, 1140, 1182, 1286, 1424
BstNI CCWGG 6 cut(s) 397, 665, 789, 1007, 1137, 1317
BstNSI RCATGY 2 cut(s) 601, 1165
BstSCI CCNGG 7 cut(s) 395, 645, 663, 787, 1005, 1135, 1315
BstSFI CTRYAG 1 cut(s) 240
BstV1I GCAGC 8 cut(s) 61, 74, 168, 226, 270, 802, 1185, 1211
BstV2I GAAGAC 1 cut(s) 569
BstX2I RGATCY 4 cut(s) 126, 384, 461, 624
BstXI CCANNNNNNTGG 1 cut(s) 331
BstYI RGATCY 4 cut(s) 126, 384, 461, 624
BsuRI GGCC 6 cut(s) 5, 35, 213, 783, 824, 1335
BtgI CCRYGG 2 cut(s) 189, 906
BtsCI GGATG 2 cut(s) 361, 1153
BtsI GCAGTG 1 cut(s) 1325
BtsIMutI CAGTG 4 cut(s) 443, 861, 1124, 1325
BveI ACCTGC 1 cut(s) 391
Cac8I GCNNGC 1 cut(s) 1404
CaiI CAGNNNCTG 1 cut(s) 68
CfoI GCGC 1 cut(s) 1134
Cfr13I GGNCC 2 cut(s) 782, 1002
Csp6I GTAC 1 cut(s) 601
CviQI GTAC 1 cut(s) 601
DdeI CTNAG 8 cut(s) 446, 473, 864, 887, 975, 1290, 1428, 1434
DpnI GATC 9 cut(s) 128, 386, 432, 451, 463, 626, 642, 966, 1301
DpnII GATC 9 cut(s) 126, 384, 430, 449, 461, 624, 640, 964, 1299
DrdI GACNNNNNNGTC 1 cut(s) 799
DseDI GACNNNNNNGTC 1 cut(s) 799
EaeI YGGCCR 2 cut(s) 33, 822
Eam1104I CTCTTC 2 cut(s) 195, 755
EarI CTCTTC 2 cut(s) 195, 755
Ecl136II GAGCTC 1 cut(s) 472
Eco130I CCWWGG 3 cut(s) 189, 906, 1210
Eco147I AGGCCT 1 cut(s) 1335
Eco24I GRGCYC 1 cut(s) 474
Eco31I GGTCTC 1 cut(s) 397
Eco32I GATATC 1 cut(s) 844
Eco47I GGWCC 1 cut(s) 1002
Eco53kI GAGCTC 1 cut(s) 472
Eco88I CYCGRG 1 cut(s) 302
EcoICRI GAGCTC 1 cut(s) 472
EcoO109I RGGNCCY 1 cut(s) 1002
EcoRII CCWGG 6 cut(s) 395, 663, 787, 1005, 1135, 1315
EcoRV GATATC 1 cut(s) 844
EcoT14I CCWWGG 3 cut(s) 189, 906, 1210
EcoT38I GRGCYC 1 cut(s) 474
ErhI CCWWGG 3 cut(s) 189, 906, 1210
FalI AAGNNNNNCTT 2 cut(s) 791, 823
FaqI GGGAC 2 cut(s) 805, 988
FbaI TGATCA 1 cut(s) 1299
Fnu4HI GCNGC 8 cut(s) 63, 75, 157, 240, 259, 816, 1174, 1200
FokI GGATG 2 cut(s) 368, 1160
FriOI GRGCYC 1 cut(s) 474
Fsp4HI GCNGC 8 cut(s) 63, 75, 157, 240, 259, 816, 1174, 1200
FspBI CTAG 1 cut(s) 981
GlaI GCGC 1 cut(s) 1133
GluI GCNGC 8 cut(s) 63, 75, 157, 240, 259, 816, 1174, 1200
GsaI CCCAGC 1 cut(s) 1443
GsuI CTGGAG 1 cut(s) 379
HaeIII GGCC 6 cut(s) 5, 35, 213, 783, 824, 1335
HapII CCGG 1 cut(s) 647
HhaI GCGC 1 cut(s) 1134
Hin6I GCGC 1 cut(s) 1132
HinP1I GCGC 1 cut(s) 1132
HincII GTYRAC 2 cut(s) 220, 586
HindII GTYRAC 2 cut(s) 220, 586
HindIII AAGCTT 3 cut(s) 688, 805, 1112
HinfI GANTC 4 cut(s) 285, 407, 674, 977
HpaII CCGG 1 cut(s) 647
HphI GGTGA 4 cut(s) 178, 313, 635, 1030
Hpy166II GTNNAC 4 cut(s) 220, 586, 1092, 1159
Hpy188I TCNGA 5 cut(s) 454, 594, 679, 883, 1350
Hpy188III TCNNGA 6 cut(s) 344, 428, 701, 962, 981, 1303
Hpy8I GTNNAC 4 cut(s) 220, 586, 1092, 1159
HpyAV CCTTC 3 cut(s) 301, 721, 1357
HpyCH4III ACNGT 3 cut(s) 49, 583, 1128
HpyCH4IV ACGT 1 cut(s) 653
HpyCH4V TGCA 8 cut(s) 242, 606, 818, 948, 1124, 1173, 1325, 1330
HpyF10VI GCNNNNNNNGC 8 cut(s) 71, 80, 156, 821, 1140, 1182, 1286, 1424
HpyF3I CTNAG 8 cut(s) 446, 473, 864, 887, 975, 1290, 1428, 1434
HpySE526I ACGT 1 cut(s) 653
HspAI GCGC 1 cut(s) 1132
KflI GGGWCCC 1 cut(s) 1002
Ksp22I TGATCA 1 cut(s) 1299
Kzo9I GATC 9 cut(s) 126, 384, 430, 449, 461, 624, 640, 964, 1299
LmnI GCTCC 1 cut(s) 883
Lsp1109I GCAGC 8 cut(s) 61, 74, 168, 226, 270, 802, 1185, 1211
LweI GCATC 1 cut(s) 159
MaeI CTAG 1 cut(s) 981
MaeII ACGT 1 cut(s) 653
MaeIII GTNAC 2 cut(s) 1018, 1270
MalI GATC 9 cut(s) 128, 386, 432, 451, 463, 626, 642, 966, 1301
MboI GATC 9 cut(s) 126, 384, 430, 449, 461, 624, 640, 964, 1299
MfeI CAATTG 1 cut(s) 379
MflI RGATCY 4 cut(s) 126, 384, 461, 624
MhlI GDGCHC 1 cut(s) 474
MlsI TGGCCA 2 cut(s) 35, 824
MluCI AATT 5 cut(s) 379, 1039, 1080, 1204, 1215
MluNI TGGCCA 2 cut(s) 35, 824
MlyI GAGTC 3 cut(s) 416, 668, 986
MmeI TCCRAC 1 cut(s) 154
Mox20I TGGCCA 2 cut(s) 35, 824
MroXI GAANNNNTTC 1 cut(s) 575
MscI TGGCCA 2 cut(s) 35, 824
MseI TTAA 5 cut(s) 363, 372, 531, 1218, 1446
MslI CAYNNNNRTG 3 cut(s) 83, 329, 996
Msp20I TGGCCA 2 cut(s) 35, 824
MspI CCGG 1 cut(s) 647
MspR9I CCNGG 7 cut(s) 397, 647, 665, 789, 1007, 1137, 1317
MunI CAATTG 1 cut(s) 379
MvaI CCWGG 6 cut(s) 397, 665, 789, 1007, 1137, 1317
MwoI GCNNNNNNNGC 8 cut(s) 71, 80, 156, 821, 1140, 1182, 1286, 1424
NciI CCSGG 1 cut(s) 647
NcoI CCATGG 2 cut(s) 189, 906
NdeII GATC 9 cut(s) 126, 384, 430, 449, 461, 624, 640, 964, 1299
NlaIV GGNNCC 3 cut(s) 626, 1003, 1004
NmuCI GTSAC 2 cut(s) 1018, 1270
NspI RCATGY 2 cut(s) 601, 1165
NspV TTCGAA 1 cut(s) 657
PceI AGGCCT 1 cut(s) 1335
PciI ACATGT 2 cut(s) 597, 1161
PdmI GAANNNNTTC 1 cut(s) 575
PfeI GAWTC 1 cut(s) 285
PkrI GCNGC 8 cut(s) 64, 76, 158, 241, 260, 817, 1175, 1201
PleI GAGTC 3 cut(s) 415, 668, 985
PpsI GAGTC 3 cut(s) 415, 668, 985
PpuMI RGGWCCY 1 cut(s) 1002
PscI ACATGT 2 cut(s) 597, 1161
Psp124BI GAGCTC 1 cut(s) 474
Psp1406I AACGTT 1 cut(s) 653
Psp5II RGGWCCY 1 cut(s) 1002
Psp6I CCWGG 6 cut(s) 395, 663, 787, 1005, 1135, 1315
PspFI CCCAGC 1 cut(s) 1439
PspGI CCWGG 6 cut(s) 395, 663, 787, 1005, 1135, 1315
PspN4I GGNNCC 3 cut(s) 626, 1003, 1004
PspPI GGNCC 2 cut(s) 782, 1002
PspPPI RGGWCCY 1 cut(s) 1002
PstI CTGCAG 1 cut(s) 244
PstNI CAGNNNCTG 1 cut(s) 68
PsuI RGATCY 4 cut(s) 126, 384, 461, 624
RsaI GTAC 1 cut(s) 602
RsaNI GTAC 1 cut(s) 601
RseI CAYNNNNRTG 3 cut(s) 83, 329, 996
SacI GAGCTC 1 cut(s) 474
SaqAI TTAA 5 cut(s) 363, 372, 531, 1218, 1446
SatI GCNGC 8 cut(s) 63, 75, 157, 240, 259, 816, 1174, 1200
Sau3AI GATC 9 cut(s) 126, 384, 430, 449, 461, 624, 640, 964, 1299
Sau96I GGNCC 2 cut(s) 782, 1002
SchI GAGTC 3 cut(s) 416, 668, 986
ScrFI CCNGG 7 cut(s) 397, 647, 665, 789, 1007, 1137, 1317
SduI GDGCHC 1 cut(s) 474
SfaNI GCATC 1 cut(s) 159
SfcI CTRYAG 1 cut(s) 240
SfuI TTCGAA 1 cut(s) 657
SinI GGWCC 1 cut(s) 1002
SmiMI CAYNNNNRTG 3 cut(s) 83, 329, 996
SmlI CTYRAG 1 cut(s) 707
SmoI CTYRAG 1 cut(s) 707
Sse9I AATT 5 cut(s) 379, 1039, 1080, 1204, 1215
SseBI AGGCCT 1 cut(s) 1335
SsiI CCGC 1 cut(s) 1280
SspMI CTAG 1 cut(s) 981
SstI GAGCTC 1 cut(s) 474
StuI AGGCCT 1 cut(s) 1335
StyD4I CCNGG 7 cut(s) 395, 645, 663, 787, 1005, 1135, 1315
StyI CCWWGG 3 cut(s) 189, 906, 1210
TaaI ACNGT 3 cut(s) 49, 583, 1128
TaiI ACGT 1 cut(s) 656
TaqI TCGA 5 cut(s) 207, 410, 639, 657, 967
TasI AATT 5 cut(s) 379, 1039, 1080, 1204, 1215
TatI WGTACW 1 cut(s) 600
TfiI GAWTC 1 cut(s) 285
Tru1I TTAA 5 cut(s) 363, 372, 531, 1218, 1446
Tru9I TTAA 5 cut(s) 363, 372, 531, 1218, 1446
TscAI CASTG 4 cut(s) 450, 868, 1131, 1332
TseFI GTSAC 2 cut(s) 1018, 1270
TseI GCWGC 8 cut(s) 62, 74, 156, 239, 258, 815, 1173, 1199
Tsp45I GTSAC 2 cut(s) 1018, 1270
TspDTI ATGAA 6 cut(s) 563, 682, 706, 1033, 1142, 1485
TspRI CASTG 4 cut(s) 450, 868, 1131, 1332
VpaK11BI GGWCC 1 cut(s) 1002
XbaI TCTAGA 1 cut(s) 980
XceI RCATGY 2 cut(s) 601, 1165
XcmI CCANNNNNNNNNTGG 2 cut(s) 85, 1232
XmnI GAANNNNTTC 1 cut(s) 575
XspI CTAG 1 cut(s) 981
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.