Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0009134

Physical Location & Seq

Genomic Coordinates Reverse (-)

12236432 .. 12239940

Gene Structure 3509 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG146200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1512 bp

ATGGCCTCCTCCTCCTCCTCTTCTTCTTCAGCTGAAGCTAACTTAGCCACGGCCAAGACGGTCCTCTCCGCCGTGGCTTCCGTGGCGGCCACGGCAATGCTAGCGAGGTCCATAGCCCAAGACTTCCTCCCCCATGAGGTCCAAGAATACTTCTTCTCCGGCATCAGAAGCTTCTTCACTCGCTTCTCTAACCAACTCACCATGGTCATCGACGAGTTCGATGGCCTCGTCGGCAACCAGATTTACGAGTCTGCCGAGGTCTACTTGGGCTCCAGAGTCTCTCCATCGACGCACAGACTCAAAGTCAGCAAGCCCGAGAAGGAGAAGAGCTTCACTATCACCATGGAGAGCAATGAAGAGATTGTGGACTTCTTCAAAGGGGTCAAGTTCAACTGGGTCTTGGTCTGCAGGCAGGTTGAGAGCAAGAACTTCCACAACCCTCGTGACCTGAATTCGACTCTGAGGTCACAAGTAAGGTGCCTTGAGCTCAGCTTCCACAAGAAGCACTTGGACTTGGTTCTGAATTCTTACCTCCCCCACATTGTGGAAGACGCAAAATCCATGAAGCAAGAAAAGAAGACACTCAAAATCTTCACCATGGATTATGACAATCTCTATTGCAATTTGGCAGATGCTTGGACTCCAACGAATCTCGATCACCCGGCAACCTTTGAGACCTTGGCTCTGGACTCAGGGATTAAGAATTTCATTCTTCGAGATCTTGACAGATTCATCAAGAGGAGGGAGTACTATAGGAAAGTTGGGAAGGCATGGAAACGAGGGTACTTGTTGTATGGACCCCCGGGAACCGGAAAATCGAGCTTGATTGCTGCAATGGCGAATTACTTGAACTTTGACATCTATGACTTGGAGCTCACGGAACTCAGGTGCAACTCTGAGCTTCGGAGGCTGCTCATTTCAATGGCGAATAGGTCAATACTGGTTGTAGAAGATATTGACTGCACCATTGAATTTCAAGATCGAATGGCCGAGTCAAATGCTACAAATGGGTCCCGAGATAATAAGCAGGTGACACTATCAGGATTGCTCAATTTCATTGATGGGCTGTGGTCGAGTTGTGGTGATGAGAGGATCATAATCTTCACAACTAATCACAAAGAAAAGCTCGACCCTGCACTCTTGCGCCCTGGTCGCATGGACGTTCATGTTAACATGTCCTACTGCACTCCAACTGGATTTAGGCTTCTTGCAGCTAATTACCTCGGAATCAAAGACCACACACTGTTTGCGGCAATTGAGAAACAAATCGAAATCACTGAAGTCACGCCTGCAGAAGTAGCTGAGCAACTGATACAGAGTGATGAACCGGACATTGCATTGCAAGGCCTGATTGAATTTCTCAAAGTGAAGAAGGAAAATGAGGAAGCCGAGGTGAAGAGGAAGCAAGAAGAGCTAGAAGCCAAGGAAAAGGAAAAGGAAACCGCTGCTAAAGAAGCCGAGACTAAGAAGGATGAGAAACCAGATGGTGATGAGAAAGTAACAAGAAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002237 GO:0002376 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005741 GO:0005743 GO:0006950 GO:0006952 GO:0006955 GO:0006970 GO:0006996 GO:0007005 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009314 GO:0009411 GO:0009416 GO:0009605 GO:0009607 GO:0009617 GO:0009626 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009751 GO:0009863 GO:0009987 GO:0010033 GO:0012501 GO:0014070 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017004 GO:0017062 GO:0017111 GO:0019866 GO:0019867 GO:0022607 GO:0023052 GO:0031090 GO:0031966 GO:0031967 GO:0031968 GO:0031975 GO:0032870 GO:0033108 GO:0033554 GO:0034050 GO:0034551 GO:0034622 GO:0035690 GO:0042221 GO:0042493 GO:0042623 GO:0042802 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046677 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065003 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071840 GO:0098588 GO:0098805 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA AAA_assoc

Protein Analysis

503

Amino Acids

57.14

Weight (kDa)

5.75

Isoelectric Point (pI)

42.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_assoc	PF14363	43 - 136	5.6e-29	Domain associated at C-terminal with AAA
AAA	PF00004	262 - 393	3.1e-20	ATPase family associated with various cellular activities (AAA)
AAA_lid_At3g28540	PF25568	395 - 464	3.5e-23	At3g28540-like, AAA+ ATPase lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009134)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G50940
fragaria_vesca	FvH4_1g12742
malus_domestica	MD02G1142300.v1.1
prunus_persica	Prupe.7G158900_v2.0.a1 Prupe.7G158900_v2.0.a1
pyrus_communis	pycom02g11210
rosa_chinensis	RchiOBHm_Chr2g0100831 RchiOBHm_Chr2g0100841
rosa_laevigata	RLG00000017015 RLG00000017017
rosa_multiflora	Rmu_sc0001659.1_g000022 Rmu_sc0001659.1_g000024
rosa_roxburghii	Rroxscaffold_2G00141810 Rroxscaffold_2G00141820
rosa_rugosa	Rorug02G0093200 Rorug02G0093300
rosa_samantha	Rh2BG143600 Rh2BG145700 Rh2CG146900 Rh2DG146200 Rh2DG146300
rosa_wichuraiana	Rw2G011020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1018
AasI	GACNNNNNNGTC	1 cut(s)	463
Acc36I	ACCTGC	2 cut(s)	403, 1018
AccB1I	GGYRCC	1 cut(s)	477
AccB7I	CCANNNNNTGG	1 cut(s)	544
AccI	GTMKAC	1 cut(s)	261
AciI	CCGC	4 cut(s)	69, 86, 1250, 1443
AclWI	GGATC	1 cut(s)	1100
AcoI	YGGCCR	3 cut(s)	51, 87, 987
AcsI	RAATTY	5 cut(s)	451, 523, 703, 971, 1355
AcuI	CTGAAG	3 cut(s)	12, 54, 1299
AdeI	CACNNNGTG	1 cut(s)	544
AfaI	GTAC	2 cut(s)	749, 785
AfiI	CCNNNNNNNGG	3 cut(s)	136, 544, 809
AflIII	ACRYGT	1 cut(s)	1173
AgsI	TTSAA	7 cut(s)	376, 391, 850, 921, 971, 977, 1355
AhdI	GACNNNNNGTC	1 cut(s)	302
AjnI	CCWGG	1 cut(s)	1147
Alw21I	GWGCWC	2 cut(s)	489, 876
Alw26I	GTCTC	3 cut(s)	283, 668, 1454
AlwI	GGATC	1 cut(s)	1100
Ama87I	CYCGRG	3 cut(s)	314, 802, 1014
AoxI	GGCC	6 cut(s)	3, 51, 87, 223, 987, 1345
ApeKI	GCWGC	4 cut(s)	830, 910, 1211, 1445
ApoI	RAATTY	5 cut(s)	451, 523, 703, 971, 1355
Asp700I	GAANNNNTTC	1 cut(s)	329
AspLEI	GCGC	1 cut(s)	1146
AspS9I	GGNCC	5 cut(s)	61, 108, 139, 797, 1011
AsuC2I	CCSGG	3 cut(s)	662, 803, 804
AsuHPI	GGTGA	8 cut(s)	190, 331, 586, 650, 1042, 1094, 1405, 1499
AsuNHI	GCTAGC	1 cut(s)	100
AvaI	CYCGRG	3 cut(s)	314, 802, 1014
AvaII	GGWCC	5 cut(s)	61, 108, 139, 797, 1011
BanI	GGYRCC	1 cut(s)	477
BanII	GRGCYC	3 cut(s)	272, 489, 876
BauI	CACGAG	1 cut(s)	441
BbsI	GAAGAC	2 cut(s)	555, 584
Bbv12I	GWGCWC	2 cut(s)	489, 876
BbvI	GCAGC	4 cut(s)	817, 897, 1223, 1432
BccI	CCATC	4 cut(s)	215, 292, 1055, 1478
BceAI	ACGGC	3 cut(s)	56, 66, 108
BcgI	CGANNNNNNTGC	2 cut(s)	980, 1014
BciT130I	CCWGG	1 cut(s)	1149
BcnI	CCSGG	3 cut(s)	662, 803, 804
BcoDI	GTCTC	3 cut(s)	283, 668, 1454
BfaI	CTAG	2 cut(s)	101, 1415
BfmI	CTRYAG	3 cut(s)	406, 751, 1290
BfuAI	ACCTGC	2 cut(s)	403, 1018
BglI	GCCNNNNNGGC	1 cut(s)	231
BglII	AGATCT	1 cut(s)	718
BisI	GCNGC	6 cut(s)	87, 831, 911, 1212, 1251, 1446
BlpI	GCTNAGC	2 cut(s)	488, 1302
BlsI	GCNGC	6 cut(s)	88, 832, 912, 1213, 1252, 1447
BmcAI	AGTACT	1 cut(s)	749
Bme1390I	CCNGG	4 cut(s)	662, 803, 804, 1149
Bme18I	GGWCC	5 cut(s)	61, 108, 139, 797, 1011
BmeRI	GACNNNNNGTC	1 cut(s)	302
BmeT110I	CYCGRG	3 cut(s)	314, 802, 1014
BmgT120I	GGNCC	5 cut(s)	61, 108, 139, 797, 1011
BmiI	GGNNCC	6 cut(s)	271, 479, 799, 808, 1012, 1013
BmrFI	CCNGG	4 cut(s)	662, 803, 804, 1149
BmrI	ACTGGG	1 cut(s)	403
BmsI	GCATC	2 cut(s)	171, 622
BmtI	GCTAGC	1 cut(s)	104
BmuI	ACTGGG	1 cut(s)	403
BpiI	GAAGAC	2 cut(s)	555, 584
BpmI	CTGGAG	1 cut(s)	256
Bpu1102I	GCTNAGC	2 cut(s)	488, 1302
BpuEI	CTTGAG	1 cut(s)	503
BpuMI	CCSGG	3 cut(s)	662, 803, 804
BsaBI	GATNNNNATC	1 cut(s)	1097
BsaI	GGTCTC	1 cut(s)	668
BsaWI	WCCGGW	2 cut(s)	809, 1327
BsaXI	ACNNNNNCTCC	4 cut(s)	140, 170, 254, 284
Bsc4I	CCNNNNNNNGG	3 cut(s)	136, 544, 809
Bse1I	ACTGG	3 cut(s)	398, 945, 1198
Bse3DI	GCAATG	5 cut(s)	102, 358, 840, 1332, 1337
Bse8I	GATNNNNATC	1 cut(s)	1097
BseBI	CCWGG	1 cut(s)	1149
BseGI	GGATG	1 cut(s)	1477
BseJI	GATNNNNATC	1 cut(s)	1097
BseLI	CCNNNNNNNGG	3 cut(s)	136, 544, 809
BseMI	GCAATG	5 cut(s)	102, 358, 840, 1332, 1337
BseMII	CTCAG	6 cut(s)	452, 502, 705, 888, 898, 1293
BseNI	ACTGG	3 cut(s)	398, 945, 1198
BseRI	GAGGAG	3 cut(s)	4, 7, 754
BseXI	GCAGC	4 cut(s)	817, 897, 1223, 1432
BsgI	GTGCAG	3 cut(s)	946, 1119, 1168
BshFI	GGCC	6 cut(s)	5, 53, 89, 225, 989, 1347
BshNI	GGYRCC	1 cut(s)	477
BsiHKAI	GWGCWC	2 cut(s)	489, 876
BsiHKCI	CYCGRG	3 cut(s)	314, 802, 1014
BsiSI	CCGG	5 cut(s)	159, 662, 803, 810, 1328
BslFI	GGGAC	1 cut(s)	997
BslI	CCNNNNNNNGG	3 cut(s)	136, 544, 809
BsmAI	GTCTC	3 cut(s)	283, 668, 1454
BsmFI	GGGAC	1 cut(s)	997
BsnI	GGCC	6 cut(s)	5, 53, 89, 225, 989, 1347
Bso31I	GGTCTC	1 cut(s)	668
BsoBI	CYCGRG	3 cut(s)	314, 802, 1014
Bsp1286I	GDGCHC	3 cut(s)	272, 489, 876
Bsp143I	GATC	4 cut(s)	655, 718, 979, 1092
Bsp1720I	GCTNAGC	2 cut(s)	488, 1302
Bsp19I	CCATGG	3 cut(s)	201, 342, 597
BspACI	CCGC	4 cut(s)	69, 86, 1250, 1443
BspANI	GGCC	6 cut(s)	5, 53, 89, 225, 989, 1347
BspCNI	CTCAG	6 cut(s)	453, 501, 704, 889, 897, 1294
BspLI	GGNNCC	6 cut(s)	271, 479, 799, 808, 1012, 1013
BspMAI	CTGCAG	2 cut(s)	410, 1294
BspMI	ACCTGC	2 cut(s)	403, 1018
BspOI	GCTAGC	1 cut(s)	104
BspPI	GGATC	1 cut(s)	1100
BspQI	GCTCTTC	2 cut(s)	320, 1404
BspT107I	GGYRCC	1 cut(s)	477
BspTNI	GGTCTC	1 cut(s)	668
BsrDI	GCAATG	5 cut(s)	102, 358, 840, 1332, 1337
BsrI	ACTGG	3 cut(s)	398, 945, 1198
BssMI	GATC	4 cut(s)	655, 718, 979, 1092
BssSI	CACGAG	1 cut(s)	441
BssT1I	CCWWGG	5 cut(s)	201, 342, 597, 678, 1422
Bst2BI	CACGAG	1 cut(s)	441
Bst2UI	CCWGG	1 cut(s)	1149
Bst4CI	ACNGT	2 cut(s)	61, 1245
Bst6I	CTCTTC	5 cut(s)	25, 320, 351, 1391, 1404
BstC8I	GCNNGC	4 cut(s)	102, 311, 410, 1290
BstDEI	CTNAG	8 cut(s)	43, 461, 488, 691, 884, 897, 1302, 1464
BstDSI	CCRYGG	7 cut(s)	48, 72, 81, 90, 201, 342, 597
BstF5I	GGATG	1 cut(s)	1477
BstHHI	GCGC	1 cut(s)	1146
BstKTI	GATC	4 cut(s)	658, 721, 982, 1095
BstMAI	GTCTC	3 cut(s)	283, 668, 1454
BstMBI	GATC	4 cut(s)	655, 718, 979, 1092
BstNI	CCWGG	1 cut(s)	1149
BstNSI	RCATGY	1 cut(s)	1177
BstSCI	CCNGG	4 cut(s)	660, 801, 802, 1147
BstSFI	CTRYAG	3 cut(s)	406, 751, 1290
BstV1I	GCAGC	4 cut(s)	817, 897, 1223, 1432
BstV2I	GAAGAC	2 cut(s)	555, 584
BstX2I	RGATCY	1 cut(s)	718
BstYI	RGATCY	1 cut(s)	718
BsuRI	GGCC	6 cut(s)	5, 53, 89, 225, 989, 1347
BtgI	CCRYGG	7 cut(s)	48, 72, 81, 90, 201, 342, 597
BtsCI	GGATG	1 cut(s)	1477
BtsIMutI	CAGTG	2 cut(s)	1241, 1275
BveI	ACCTGC	2 cut(s)	403, 1018
Cac8I	GCNNGC	4 cut(s)	102, 311, 410, 1290
CfoI	GCGC	1 cut(s)	1146
Cfr13I	GGNCC	5 cut(s)	61, 108, 139, 797, 1011
Cfr9I	CCCGGG	1 cut(s)	802
CseI	GACGC	2 cut(s)	298, 560
Csp6I	GTAC	2 cut(s)	748, 784
CviAII	CATG	9 cut(s)	134, 202, 343, 562, 598, 771, 1156, 1166, 1174
CviQI	GTAC	2 cut(s)	748, 784
DdeI	CTNAG	8 cut(s)	43, 461, 488, 691, 884, 897, 1302, 1464
DpnI	GATC	4 cut(s)	657, 720, 981, 1094
DpnII	GATC	4 cut(s)	655, 718, 979, 1092
DraIII	CACNNNGTG	1 cut(s)	544
DrdI	GACNNNNNNGTC	1 cut(s)	463
DriI	GACNNNNNGTC	1 cut(s)	302
DseDI	GACNNNNNNGTC	1 cut(s)	463
EaeI	YGGCCR	3 cut(s)	51, 87, 987
Eam1104I	CTCTTC	5 cut(s)	25, 320, 351, 1391, 1404
Eam1105I	GACNNNNNGTC	1 cut(s)	302
EarI	CTCTTC	5 cut(s)	25, 320, 351, 1391, 1404
EciI	GGCGGA	1 cut(s)	58
Ecl136II	GAGCTC	2 cut(s)	487, 874
Eco130I	CCWWGG	5 cut(s)	201, 342, 597, 678, 1422
Eco147I	AGGCCT	1 cut(s)	1347
Eco24I	GRGCYC	3 cut(s)	272, 489, 876
Eco31I	GGTCTC	1 cut(s)	668
Eco47I	GGWCC	5 cut(s)	61, 108, 139, 797, 1011
Eco53kI	GAGCTC	2 cut(s)	487, 874
Eco57I	CTGAAG	3 cut(s)	12, 54, 1299
Eco88I	CYCGRG	3 cut(s)	314, 802, 1014
EcoICRI	GAGCTC	2 cut(s)	487, 874
EcoO109I	RGGNCCY	1 cut(s)	1011
EcoRI	GAATTC	2 cut(s)	451, 523
EcoRII	CCWGG	1 cut(s)	1147
EcoT14I	CCWWGG	5 cut(s)	201, 342, 597, 678, 1422
EcoT38I	GRGCYC	3 cut(s)	272, 489, 876
ErhI	CCWWGG	5 cut(s)	201, 342, 597, 678, 1422
FaeI	CATG	9 cut(s)	137, 205, 346, 565, 601, 774, 1159, 1169, 1177
FalI	AAGNNNNNCTT	2 cut(s)	491, 523
FaqI	GGGAC	1 cut(s)	997
FatI	CATG	9 cut(s)	133, 201, 342, 561, 597, 770, 1155, 1165, 1173
FblI	GTMKAC	1 cut(s)	261
Fnu4HI	GCNGC	6 cut(s)	87, 831, 911, 1212, 1251, 1446
FokI	GGATG	1 cut(s)	1484
FriOI	GRGCYC	3 cut(s)	272, 489, 876
Fsp4HI	GCNGC	6 cut(s)	87, 831, 911, 1212, 1251, 1446
FspBI	CTAG	2 cut(s)	101, 1415
GlaI	GCGC	1 cut(s)	1145
GluI	GCNGC	6 cut(s)	87, 831, 911, 1212, 1251, 1446
GsuI	CTGGAG	1 cut(s)	256
HaeIII	GGCC	6 cut(s)	5, 53, 89, 225, 989, 1347
HapII	CCGG	5 cut(s)	159, 662, 803, 810, 1328
HgaI	GACGC	2 cut(s)	298, 560
HhaI	GCGC	1 cut(s)	1146
Hin1II	CATG	9 cut(s)	137, 205, 346, 565, 601, 774, 1159, 1169, 1177
Hin6I	GCGC	1 cut(s)	1144
HinP1I	GCGC	1 cut(s)	1144
HincII	GTYRAC	1 cut(s)	1171
HindII	GTYRAC	1 cut(s)	1171
HindIII	AAGCTT	1 cut(s)	169
HpaI	GTTAAC	1 cut(s)	1171
HpaII	CCGG	5 cut(s)	159, 662, 803, 810, 1328
HphI	GGTGA	8 cut(s)	190, 331, 586, 650, 1042, 1094, 1405, 1499
Hpy166II	GTNNAC	3 cut(s)	262, 367, 1171
Hpy188I	TCNGA	6 cut(s)	167, 462, 522, 898, 906, 1226
Hpy8I	GTNNAC	3 cut(s)	262, 367, 1171
Hpy99I	CGWCG	3 cut(s)	215, 233, 292
HpyAV	CCTTC	4 cut(s)	313, 760, 1366, 1462
HpyCH4III	ACNGT	2 cut(s)	61, 1245
HpyCH4IV	ACGT	1 cut(s)	1161
HpyF3I	CTNAG	8 cut(s)	43, 461, 488, 691, 884, 897, 1302, 1464
HpySE526I	ACGT	1 cut(s)	1161
Hsp92II	CATG	9 cut(s)	137, 205, 346, 565, 601, 774, 1159, 1169, 1177
HspAI	GCGC	1 cut(s)	1144
KflI	GGGWCCC	1 cut(s)	1011
KspAI	GTTAAC	1 cut(s)	1171
Kzo9I	GATC	4 cut(s)	655, 718, 979, 1092
LguI	GCTCTTC	2 cut(s)	320, 1404
LmnI	GCTCC	2 cut(s)	275, 871
Lsp1109I	GCAGC	4 cut(s)	817, 897, 1223, 1432
LweI	GCATC	2 cut(s)	171, 622
MaeI	CTAG	2 cut(s)	101, 1415
MaeII	ACGT	1 cut(s)	1161
MaeIII	GTNAC	5 cut(s)	443, 465, 1030, 1282, 1498
MalI	GATC	4 cut(s)	657, 720, 981, 1094
MboI	GATC	4 cut(s)	655, 718, 979, 1092
MfeI	CAATTG	1 cut(s)	1254
MflI	RGATCY	1 cut(s)	718
MhlI	GDGCHC	3 cut(s)	272, 489, 876
MlyI	GAGTC	7 cut(s)	257, 285, 291, 451, 634, 683, 1001
MmeI	TCCRAC	2 cut(s)	668, 1214
MroXI	GAANNNNTTC	1 cut(s)	329
MseI	TTAA	2 cut(s)	699, 1170
MslI	CAYNNNNRTG	2 cut(s)	95, 920
MspA1I	CMGCKG	2 cut(s)	32, 1445
MspI	CCGG	5 cut(s)	159, 662, 803, 810, 1328
MspR9I	CCNGG	4 cut(s)	662, 803, 804, 1149
MunI	CAATTG	1 cut(s)	1254
MvaI	CCWGG	1 cut(s)	1149
NciI	CCSGG	3 cut(s)	662, 803, 804
NcoI	CCATGG	3 cut(s)	201, 342, 597
NdeII	GATC	4 cut(s)	655, 718, 979, 1092
NheI	GCTAGC	1 cut(s)	100
NlaIII	CATG	9 cut(s)	137, 205, 346, 565, 601, 774, 1159, 1169, 1177
NlaIV	GGNNCC	6 cut(s)	271, 479, 799, 808, 1012, 1013
NmeAIII	GCCGAG	4 cut(s)	280, 1015, 1414, 1483
NmuCI	GTSAC	4 cut(s)	443, 465, 1030, 1282
NspI	RCATGY	1 cut(s)	1177
PaqCI	CACCTGC	1 cut(s)	1018
PceI	AGGCCT	1 cut(s)	1347
PciI	ACATGT	1 cut(s)	1173
PciSI	GCTCTTC	2 cut(s)	320, 1404
PcsI	WCGNNNNNNNCGW	3 cut(s)	216, 225, 252
PdmI	GAANNNNTTC	1 cut(s)	329
PfeI	GAWTC	3 cut(s)	649, 729, 1227
PflMI	CCANNNNNTGG	1 cut(s)	544
PkrI	GCNGC	6 cut(s)	88, 832, 912, 1213, 1252, 1447
PleI	GAGTC	7 cut(s)	256, 284, 291, 451, 634, 683, 1000
PpsI	GAGTC	7 cut(s)	256, 284, 291, 451, 634, 683, 1000
PpuMI	RGGWCCY	1 cut(s)	1011
PscI	ACATGT	1 cut(s)	1173
Psp124BI	GAGCTC	2 cut(s)	489, 876
Psp5II	RGGWCCY	1 cut(s)	1011
Psp6I	CCWGG	1 cut(s)	1147
PspGI	CCWGG	1 cut(s)	1147
PspN4I	GGNNCC	6 cut(s)	271, 479, 799, 808, 1012, 1013
PspPI	GGNCC	5 cut(s)	61, 108, 139, 797, 1011
PspPPI	RGGWCCY	1 cut(s)	1011
PstI	CTGCAG	2 cut(s)	410, 1294
PsuI	RGATCY	1 cut(s)	718
PvuII	CAGCTG	1 cut(s)	32
RsaI	GTAC	2 cut(s)	749, 785
RsaNI	GTAC	2 cut(s)	748, 784
RseI	CAYNNNNRTG	2 cut(s)	95, 920
SacI	GAGCTC	2 cut(s)	489, 876
SapI	GCTCTTC	2 cut(s)	320, 1404
SaqAI	TTAA	2 cut(s)	699, 1170
SatI	GCNGC	6 cut(s)	87, 831, 911, 1212, 1251, 1446
Sau3AI	GATC	4 cut(s)	655, 718, 979, 1092
Sau96I	GGNCC	5 cut(s)	61, 108, 139, 797, 1011
ScaI	AGTACT	1 cut(s)	749
SchI	GAGTC	7 cut(s)	257, 285, 291, 451, 634, 683, 1001
ScrFI	CCNGG	4 cut(s)	662, 803, 804, 1149
SduI	GDGCHC	3 cut(s)	272, 489, 876
SfaNI	GCATC	2 cut(s)	171, 622
SfcI	CTRYAG	3 cut(s)	406, 751, 1290
SinI	GGWCC	5 cut(s)	61, 108, 139, 797, 1011
SmaI	CCCGGG	1 cut(s)	804
SmiMI	CAYNNNNRTG	2 cut(s)	95, 920
SmlI	CTYRAG	1 cut(s)	482
SmoI	CTYRAG	1 cut(s)	482
SseBI	AGGCCT	1 cut(s)	1347
SsiI	CCGC	4 cut(s)	69, 86, 1250, 1443
SspMI	CTAG	2 cut(s)	101, 1415
SstI	GAGCTC	2 cut(s)	489, 876
StuI	AGGCCT	1 cut(s)	1347
StyD4I	CCNGG	4 cut(s)	660, 801, 802, 1147
StyI	CCWWGG	5 cut(s)	201, 342, 597, 678, 1422
TaaI	ACNGT	2 cut(s)	61, 1245
TaiI	ACGT	1 cut(s)	1164
TatI	WGTACW	1 cut(s)	747
TauI	GCSGC	2 cut(s)	89, 1253
TfiI	GAWTC	3 cut(s)	649, 729, 1227
Tru1I	TTAA	2 cut(s)	699, 1170
Tru9I	TTAA	2 cut(s)	699, 1170
TscAI	CASTG	2 cut(s)	1248, 1282
TseFI	GTSAC	4 cut(s)	443, 465, 1030, 1282
TseI	GCWGC	4 cut(s)	830, 910, 1211, 1445
Tsp45I	GTSAC	4 cut(s)	443, 465, 1030, 1282
TspDTI	ATGAA	7 cut(s)	369, 578, 697, 721, 1045, 1154, 1338
TspGWI	ACGGA	2 cut(s)	70, 893
TspMI	CCCGGG	1 cut(s)	802
TspRI	CASTG	2 cut(s)	1248, 1282
Van91I	CCANNNNNTGG	1 cut(s)	544
VpaK11BI	GGWCC	5 cut(s)	61, 108, 139, 797, 1011
XapI	RAATTY	5 cut(s)	451, 523, 703, 971, 1355
XceI	RCATGY	1 cut(s)	1177
XmaI	CCCGGG	1 cut(s)	802
XmiI	GTMKAC	1 cut(s)	261
XmnI	GAANNNNTTC	1 cut(s)	329
XspI	CTAG	2 cut(s)	101, 1415
ZrmI	AGTACT	1 cut(s)	749

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.