Prupe.7G191700_v2.0.a1

Belongs to the 'GDSL' lipolytic enzyme family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0017214
Physical Location & Seq
Forward (+)
18312483 .. 18314531
2049 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G191700.1

Sequence Viewer

Length: 1200 bp
ATGGCAAGCCTGCAGAATTCTCCCTTGGATCACTCAATCCTCATCTGTGTGAGCACTCTGCTGTTGTCAACTGTGTTTGGATCATGTGCTAGTGATCACACATTGAGCAGCAGGACTGTTGCCTTGTTCACTTTTGGTGACTCAACTGTAGATCCTGGAAACAACAATTACATCAAAACCATTCCTGAGAACCAAGCACATTACAAGCCGTACGGGCAGAACGGCTTCTTCCAACACCCCACGGGACGCTTTTCTGATGGTCGTATCATCGTAGATTACATAGCGGACTATGCAAAGCTGCCACTGATCCCTCCATTTTTACAACCTTCTGCTGATTACACAAATGGTGTCAACTTTGCATCTGCTGGGGCTGGCGTCCTTTCTGAAACCAATCAAGGATTGGTGATTGATCTTCAGACACAATTGAAAAACTTTGAAGAGGTGCAGAAATCACTAACAGAAAAGTTTGGAGAAGTGAAAGCAAAGGAAGTGATATCAGAAGCAGTTTATTTCATTAGTATTGGGAGCAATGATTACATGGGTGGTTATTTGGCCAACCCAAAAATGCAAGAACAATATAACCCTGAACAATATGTGGGGATGGTAATTGGAAACTTGACACAGGCAATCCAAGTGTTGTATGGGAAAGGGGCTAGAAAATTTGCTTTCCTAAGGTTGTGTCCACTTGGATGCTTGCCTGCCTTTAGAGCTCTGAACCACAAAGCCAGTGGAGGGGATTGCTTTGAAGCAGCTTCTGCCCTTGCTCTAGCACATAACAATGCTTTAAAAACTGTGCTCACAAGCCTTGAATATATGCTCAAACAGTTTAAGTACAGCACCTCCAATTTTTATGATTGGCTCCAGGACAGAATAGATAATCCCTACAAACATGGTTACAAGGATGGAGTGAATGCTTGCTGTGGGACTGGACCCTATGGGGGCATCTTCACCTGTGGAGGCACAAAGGAAGTTAAAGATTACCAATTATGTGAAAATGCTGATGATTATGTATGGTGGGATTCTTTTCACCCCACTGAGAGGATCCATGAGCAGCTTGCAAAGGCTCTCTGGAATGGGGCCCCTTCCTCTGTAGGGCCATACAACCTAGAAGAGCTCTTCTCAGTTGATGAGGAGAAGCTCACCATTGGCTATATGGTTGATGACCCAGAAGCACAAGATCACTTTTCACTTCTAAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Lipase_GDSL

Protein Analysis

400

Amino Acids

44.14

Weight (kDa)

5.14

Isoelectric Point (pI)

29.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017214)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g09430
malus_domestica MD02G1102600.v1.1
prunus_persica Prupe.7G191700_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0095981
rosa_laevigata RLG00000016614
rosa_multiflora Rmu_sc0002497.1_g000009
rosa_roxburghii Rroxscaffold_2G00145890
rosa_rugosa Rorug02G0055600
rosa_samantha Rh2AG103500 Rh2BG105000 Rh2CG107500 Rh2DG105400
rosa_wichuraiana Rw2G007890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 284
AclWI GGATC 6 cut(s) 36, 88, 146, 301, 1036, 1049
AcoI YGGCCR 1 cut(s) 552
AcsI RAATTY 2 cut(s) 16, 659
AcuI CTGAAG 1 cut(s) 398
AcyI GRCGYC 1 cut(s) 375
AfaI GTAC 2 cut(s) 212, 833
AfiI CCNNNNNNNGG 4 cut(s) 732, 938, 1038, 1092
AgsI TTSAA 4 cut(s) 427, 437, 746, 809
AjnI CCWGG 2 cut(s) 154, 861
AjuI GAANNNNNNNTTGG 2 cut(s) 8, 40
AluBI AGCT 6 cut(s) 298, 710, 752, 1054, 1114, 1138
AluI AGCT 6 cut(s) 298, 710, 752, 1054, 1114, 1138
Alw21I GWGCWC 4 cut(s) 56, 712, 798, 1116
AlwI GGATC 6 cut(s) 36, 88, 146, 301, 1036, 1049
AlwNI CAGNNNCTG 1 cut(s) 755
AoxI GGCC 3 cut(s) 552, 1077, 1094
ApaI GGGCCC 1 cut(s) 1081
ApeKI GCWGC 4 cut(s) 108, 298, 749, 1051
ApoI RAATTY 2 cut(s) 16, 659
Asp700I GAANNNNTTC 1 cut(s) 224
AspS9I GGNCC 4 cut(s) 929, 1077, 1078, 1094
AsuHPI GGTGA 5 cut(s) 149, 415, 940, 1019, 1132
AvaII GGWCC 1 cut(s) 929
AxyI CCTNAGG 1 cut(s) 671
BaeGI GKGCMC 1 cut(s) 1081
BalI TGGCCA 1 cut(s) 554
BamHI GGATCC 1 cut(s) 1041
BanII GRGCYC 3 cut(s) 712, 1081, 1116
Bbv12I GWGCWC 4 cut(s) 56, 712, 798, 1116
BbvI GCAGC 4 cut(s) 120, 285, 761, 1063
BccI CCATC 3 cut(s) 251, 595, 896
BceAI ACGGC 2 cut(s) 193, 238
BciT130I CCWGG 2 cut(s) 156, 863
BclI TGATCA 1 cut(s) 94
BfaI CTAG 4 cut(s) 90, 654, 767, 1106
BfmI CTRYAG 3 cut(s) 11, 147, 1089
BglI GCCNNNNNGGC 1 cut(s) 214
BisI GCNGC 4 cut(s) 109, 299, 750, 1052
BlsI GCNGC 4 cut(s) 110, 300, 751, 1053
Bme1390I CCNGG 2 cut(s) 156, 863
Bme18I GGWCC 1 cut(s) 929
BmgT120I GGNCC 4 cut(s) 929, 1077, 1078, 1094
BmiI GGNNCC 6 cut(s) 860, 931, 1043, 1078, 1079, 1080
BmrFI CCNGG 2 cut(s) 156, 863
BmsI GCATC 3 cut(s) 368, 680, 951
BplI GAGNNNNNCTC 2 cut(s) 1103, 1135
BpmI CTGGAG 1 cut(s) 845
BsaHI GRCGYC 1 cut(s) 375
BsaJI CCNNGG 2 cut(s) 24, 240
BsaXI ACNNNNNCTCC 2 cut(s) 824, 854
Bsc4I CCNNNNNNNGG 4 cut(s) 732, 938, 1038, 1092
Bse1I ACTGG 2 cut(s) 726, 931
Bse21I CCTNAGG 1 cut(s) 671
Bse3DI GCAATG 1 cut(s) 535
BseBI CCWGG 2 cut(s) 156, 863
BseDI CCNNGG 2 cut(s) 24, 240
BseGI GGATG 3 cut(s) 606, 695, 907
BseLI CCNNNNNNNGG 4 cut(s) 732, 938, 1038, 1092
BseMI GCAATG 1 cut(s) 535
BseMII CTCAG 3 cut(s) 177, 1026, 1134
BseNI ACTGG 2 cut(s) 726, 931
BseRI GAGGAG 1 cut(s) 1145
BseSI GKGCMC 1 cut(s) 1081
BseXI GCAGC 4 cut(s) 120, 285, 761, 1063
BseYI CCCAGC 1 cut(s) 365
BsgI GTGCAG 1 cut(s) 464
BshFI GGCC 3 cut(s) 554, 1079, 1096
BsiHKAI GWGCWC 4 cut(s) 56, 712, 798, 1116
BsiWI CGTACG 1 cut(s) 210
BslFI GGGAC 2 cut(s) 258, 937
BslI CCNNNNNNNGG 4 cut(s) 732, 938, 1038, 1092
BsmFI GGGAC 2 cut(s) 258, 937
BsmI GAATGC 1 cut(s) 916
BsnI GGCC 3 cut(s) 554, 1079, 1096
Bsp120I GGGCCC 1 cut(s) 1077
Bsp1286I GDGCHC 5 cut(s) 56, 712, 798, 1081, 1116
Bsp143I GATC 8 cut(s) 28, 80, 94, 151, 306, 409, 1041, 1177
BspACI CCGC 1 cut(s) 284
BspANI GGCC 3 cut(s) 554, 1079, 1096
BspCNI CTCAG 3 cut(s) 178, 1027, 1133
BspLI GGNNCC 6 cut(s) 860, 931, 1043, 1078, 1079, 1080
BspMAI CTGCAG 1 cut(s) 15
BspPI GGATC 6 cut(s) 36, 88, 146, 301, 1036, 1049
BspQI GCTCTTC 2 cut(s) 1104, 1121
BsrDI GCAATG 1 cut(s) 535
BsrI ACTGG 2 cut(s) 726, 931
BssECI CCNNGG 2 cut(s) 24, 240
BssMI GATC 8 cut(s) 28, 80, 94, 151, 306, 409, 1041, 1177
BssNI GRCGYC 1 cut(s) 375
BssT1I CCWWGG 1 cut(s) 24
Bst2UI CCWGG 2 cut(s) 156, 863
Bst4CI ACNGT 5 cut(s) 73, 118, 148, 793, 825
Bst6I CTCTTC 3 cut(s) 432, 1104, 1121
BstACI GRCGYC 1 cut(s) 375
BstAPI GCANNNNNTGC 1 cut(s) 755
BstC8I GCNNGC 7 cut(s) 7, 11, 373, 695, 699, 916, 1056
BstDEI CTNAG 4 cut(s) 186, 671, 1035, 1120
BstDSI CCRYGG 1 cut(s) 240
BstF5I GGATG 3 cut(s) 606, 695, 907
BstKTI GATC 8 cut(s) 31, 83, 97, 154, 309, 412, 1044, 1180
BstMBI GATC 8 cut(s) 28, 80, 94, 151, 306, 409, 1041, 1177
BstMWI GCNNNNNNNGC 4 cut(s) 214, 290, 707, 755
BstNI CCWGG 2 cut(s) 156, 863
BstSCI CCNGG 2 cut(s) 154, 861
BstSFI CTRYAG 3 cut(s) 11, 147, 1089
BstSLI GKGCMC 1 cut(s) 1081
BstV1I GCAGC 4 cut(s) 120, 285, 761, 1063
BstX2I RGATCY 2 cut(s) 151, 1041
BstYI RGATCY 2 cut(s) 151, 1041
Bsu36I CCTNAGG 1 cut(s) 671
BsuRI GGCC 3 cut(s) 554, 1079, 1096
BtgI CCRYGG 1 cut(s) 240
BtsCI GGATG 3 cut(s) 606, 695, 907
BtsIMutI CAGTG 3 cut(s) 302, 733, 1032
Cac8I GCNNGC 7 cut(s) 7, 11, 373, 695, 699, 916, 1056
CaiI CAGNNNCTG 1 cut(s) 755
Cfr13I GGNCC 4 cut(s) 929, 1077, 1078, 1094
CseI GACGC 2 cut(s) 255, 364
Csp6I GTAC 2 cut(s) 211, 832
CspCI CAANNNNNGTGG 2 cut(s) 709, 744
CviAII CATG 4 cut(s) 84, 538, 890, 1046
CviQI GTAC 2 cut(s) 211, 832
DdeI CTNAG 4 cut(s) 186, 671, 1035, 1120
DpnI GATC 8 cut(s) 30, 82, 96, 153, 308, 411, 1043, 1179
DpnII GATC 8 cut(s) 28, 80, 94, 151, 306, 409, 1041, 1177
DraI TTTAAA 1 cut(s) 786
EaeI YGGCCR 1 cut(s) 552
Eam1104I CTCTTC 3 cut(s) 432, 1104, 1121
EarI CTCTTC 3 cut(s) 432, 1104, 1121
Ecl136II GAGCTC 2 cut(s) 710, 1114
Eco130I CCWWGG 1 cut(s) 24
Eco24I GRGCYC 3 cut(s) 712, 1081, 1116
Eco32I GATATC 1 cut(s) 495
Eco47I GGWCC 1 cut(s) 929
Eco53kI GAGCTC 2 cut(s) 710, 1114
Eco57I CTGAAG 1 cut(s) 398
Eco81I CCTNAGG 1 cut(s) 671
EcoICRI GAGCTC 2 cut(s) 710, 1114
EcoO109I RGGNCCY 2 cut(s) 1077, 1078
EcoRI GAATTC 1 cut(s) 16
EcoRII CCWGG 2 cut(s) 154, 861
EcoRV GATATC 1 cut(s) 495
EcoT14I CCWWGG 1 cut(s) 24
EcoT38I GRGCYC 3 cut(s) 712, 1081, 1116
ErhI CCWWGG 1 cut(s) 24
FaeI CATG 4 cut(s) 87, 541, 893, 1049
FaqI GGGAC 2 cut(s) 258, 937
FatI CATG 4 cut(s) 83, 537, 889, 1045
FbaI TGATCA 1 cut(s) 94
Fnu4HI GCNGC 4 cut(s) 109, 299, 750, 1052
FokI GGATG 3 cut(s) 613, 702, 914
FriOI GRGCYC 3 cut(s) 712, 1081, 1116
Fsp4HI GCNGC 4 cut(s) 109, 299, 750, 1052
FspBI CTAG 4 cut(s) 90, 654, 767, 1106
GluI GCNGC 4 cut(s) 109, 299, 750, 1052
GsaI CCCAGC 1 cut(s) 369
GsuI CTGGAG 1 cut(s) 845
HaeIII GGCC 3 cut(s) 554, 1079, 1096
HgaI GACGC 2 cut(s) 255, 364
Hin1I GRCGYC 1 cut(s) 375
Hin1II CATG 4 cut(s) 87, 541, 893, 1049
HincII GTYRAC 2 cut(s) 69, 352
HindII GTYRAC 2 cut(s) 69, 352
HinfI GANTC 2 cut(s) 140, 1019
HphI GGTGA 5 cut(s) 149, 415, 940, 1019, 1132
Hpy166II GTNNAC 4 cut(s) 69, 129, 352, 683
Hpy188I TCNGA 5 cut(s) 256, 385, 417, 499, 714
Hpy188III TCNNGA 2 cut(s) 185, 1069
Hpy8I GTNNAC 4 cut(s) 69, 129, 352, 683
HpyAV CCTTC 2 cut(s) 336, 1092
HpyCH4III ACNGT 5 cut(s) 73, 118, 148, 793, 825
HpyCH4V TGCA 6 cut(s) 13, 293, 359, 445, 568, 1058
HpyF10VI GCNNNNNNNGC 4 cut(s) 214, 290, 707, 755
HpyF3I CTNAG 4 cut(s) 186, 671, 1035, 1120
Hsp92I GRCGYC 1 cut(s) 375
Hsp92II CATG 4 cut(s) 87, 541, 893, 1049
Ksp22I TGATCA 1 cut(s) 94
Kzo9I GATC 8 cut(s) 28, 80, 94, 151, 306, 409, 1041, 1177
LguI GCTCTTC 2 cut(s) 1104, 1121
LmnI GCTCC 2 cut(s) 525, 864
Lsp1109I GCAGC 4 cut(s) 120, 285, 761, 1063
LweI GCATC 3 cut(s) 368, 680, 951
MaeI CTAG 4 cut(s) 90, 654, 767, 1106
MaeIII GTNAC 2 cut(s) 137, 893
MalI GATC 8 cut(s) 30, 82, 96, 153, 308, 411, 1043, 1179
MboI GATC 8 cut(s) 28, 80, 94, 151, 306, 409, 1041, 1177
MboII GAAGA 6 cut(s) 220, 404, 449, 937, 1108, 1121
MfeI CAATTG 1 cut(s) 422
MflI RGATCY 2 cut(s) 151, 1041
MhlI GDGCHC 5 cut(s) 56, 712, 798, 1081, 1116
MlsI TGGCCA 1 cut(s) 554
MluCI AATT 7 cut(s) 16, 166, 422, 606, 659, 844, 983
MluNI TGGCCA 1 cut(s) 554
MlyI GAGTC 1 cut(s) 134
MmeI TCCRAC 1 cut(s) 256
MnlI CCTC 9 cut(s) 50, 321, 433, 725, 850, 950, 1032, 1096, 1123
Mox20I TGGCCA 1 cut(s) 554
MroXI GAANNNNTTC 1 cut(s) 224
MscI TGGCCA 1 cut(s) 554
MseI TTAA 3 cut(s) 785, 828, 972
MslI CAYNNNNRTG 3 cut(s) 47, 688, 777
Msp20I TGGCCA 1 cut(s) 554
MspR9I CCNGG 2 cut(s) 156, 863
MunI CAATTG 1 cut(s) 422
Mva1269I GAATGC 1 cut(s) 916
MvaI CCWGG 2 cut(s) 156, 863
MwoI GCNNNNNNNGC 4 cut(s) 214, 290, 707, 755
NdeII GATC 8 cut(s) 28, 80, 94, 151, 306, 409, 1041, 1177
NlaIII CATG 4 cut(s) 87, 541, 893, 1049
NlaIV GGNNCC 6 cut(s) 860, 931, 1043, 1078, 1079, 1080
NmuCI GTSAC 1 cut(s) 137
PciSI GCTCTTC 2 cut(s) 1104, 1121
PctI GAATGC 1 cut(s) 916
PdmI GAANNNNTTC 1 cut(s) 224
PfeI GAWTC 1 cut(s) 1019
Pfl23II CGTACG 1 cut(s) 210
PfoI TCCNGGA 2 cut(s) 154, 861
PkrI GCNGC 4 cut(s) 110, 300, 751, 1053
PleI GAGTC 1 cut(s) 134
PpsI GAGTC 1 cut(s) 134
Psp124BI GAGCTC 2 cut(s) 712, 1116
Psp6I CCWGG 2 cut(s) 154, 861
PspFI CCCAGC 1 cut(s) 365
PspGI CCWGG 2 cut(s) 154, 861
PspLI CGTACG 1 cut(s) 210
PspN4I GGNNCC 6 cut(s) 860, 931, 1043, 1078, 1079, 1080
PspOMI GGGCCC 1 cut(s) 1077
PspPI GGNCC 4 cut(s) 929, 1077, 1078, 1094
PstI CTGCAG 1 cut(s) 15
PstNI CAGNNNCTG 1 cut(s) 755
PsuI RGATCY 2 cut(s) 151, 1041
RsaI GTAC 2 cut(s) 212, 833
RsaNI GTAC 2 cut(s) 211, 832
RseI CAYNNNNRTG 3 cut(s) 47, 688, 777
SacI GAGCTC 2 cut(s) 712, 1116
SapI GCTCTTC 2 cut(s) 1104, 1121
SaqAI TTAA 3 cut(s) 785, 828, 972
SatI GCNGC 4 cut(s) 109, 299, 750, 1052
Sau3AI GATC 8 cut(s) 28, 80, 94, 151, 306, 409, 1041, 1177
Sau96I GGNCC 4 cut(s) 929, 1077, 1078, 1094
SchI GAGTC 1 cut(s) 134
ScrFI CCNGG 2 cut(s) 156, 863
SduI GDGCHC 5 cut(s) 56, 712, 798, 1081, 1116
SfaNI GCATC 3 cut(s) 368, 680, 951
SfcI CTRYAG 3 cut(s) 11, 147, 1089
SinI GGWCC 1 cut(s) 929
SmiMI CAYNNNNRTG 3 cut(s) 47, 688, 777
Sse9I AATT 7 cut(s) 16, 166, 422, 606, 659, 844, 983
SsiI CCGC 1 cut(s) 284
SspMI CTAG 4 cut(s) 90, 654, 767, 1106
SstI GAGCTC 2 cut(s) 712, 1116
StyD4I CCNGG 2 cut(s) 154, 861
StyI CCWWGG 1 cut(s) 24
TaaI ACNGT 5 cut(s) 73, 118, 148, 793, 825
TasI AATT 7 cut(s) 16, 166, 422, 606, 659, 844, 983
TatI WGTACW 1 cut(s) 831
TfiI GAWTC 1 cut(s) 1019
Tru1I TTAA 3 cut(s) 785, 828, 972
Tru9I TTAA 3 cut(s) 785, 828, 972
TscAI CASTG 3 cut(s) 309, 733, 1039
TseFI GTSAC 1 cut(s) 137
TseI GCWGC 4 cut(s) 108, 298, 749, 1051
Tsp45I GTSAC 1 cut(s) 137
TspDTI ATGAA 1 cut(s) 502
TspRI CASTG 3 cut(s) 309, 733, 1039
VpaK11BI GGWCC 1 cut(s) 929
XapI RAATTY 2 cut(s) 16, 659
XcmI CCANNNNNNNNNTGG 4 cut(s) 397, 638, 725, 1150
XmnI GAANNNNTTC 1 cut(s) 224
XspI CTAG 4 cut(s) 90, 654, 767, 1106
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.