Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0017128

Physical Location & Seq

Genomic Coordinates Forward (+)

18520951 .. 18522728

Gene Structure 1778 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G195500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 804 bp

ATGGCCCTGGCTATTACTTCTGCACTCTCAACCATCCCAAGCAGGTTTCGGATTGAGTACAGAGAAGTGCCTCGGAAATTTTGCCCAGGAAAATTAAAACCATGCATGCTGGGAAGAAGAACAACCAGTTTAAATGCAACAAAAGGAGTGTCAAGTGTGTGTGAACCACTCCCTCCTGATAGGCCATTGTGGTTTCCTGGTAGCTCACCTCCAGAGTGGCTTGATGGCAGCCTTCCTGGTGATTTTGGCTTTGACCCCCTTGGATTAGGGTCTGATCCTGAGTTACTAAAATGGTTTGCACAAGCTGAGCTGATGCATGGCAGATGGGCAATGCTGGCAGTGTCTGGAATTCTAATTCCAGAGTGGCTTGAAAGATTAGGGTTTATTGAGAACTTCTCATGGTTTGAGGCTGGTGAGAGAGAATACTTTGCAGACCCCACAACCCTGTTTGTGGTGCAGTTAGCATTAATGGGGTGGGTTGAGGGAAGGAGATGGGCTGACATAATTAACCCTGGGAGTGTTGATATTGAGCCTAAGCTGCCTCACAAAAAGAACCCAAAACCAGATGTTGGGTACCCTGGTGGGCTATGGTTTGATCCCATGATGTGGGGAAGAGGATCTCCTGAGCCTGTTATGGTGTTGAGAACAAAGGAGATAAAAAATGGGCGCCTTGCAATGCTGGCTTTTGTAGGGTTCTTGTTCCAAGCCATTTATACAGGGAAAGATCCCATTGAGAATTTGATGGCTCATATTGCAGATCCTGGTCACTGCAACATATTTTCGGCTTTCACTTCACAATATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009637 GO:0009639 GO:0009765 GO:0009768 GO:0009941 GO:0009987 GO:0010114 GO:0010218 GO:0010287 GO:0015979 GO:0016020 GO:0016168 GO:0019684 GO:0031409 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0034357 GO:0042651 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0046906 GO:0048037 GO:0050896 GO:0055035 GO:0097159 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00196 map00196

Pfam Domains

Protein Families

Chloroa_b-bind

Protein Analysis

268

Amino Acids

29.91

Weight (kDa)

6.12

Isoelectric Point (pI)

44.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0017128)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19150
fragaria_vesca	FvH4_1g09040 FvH4_1g09040
malus_domestica	MD02G1095600.v1.1
prunus_persica	Prupe.7G195500_v2.0.a1
pyrus_communis	pycom02g07570
rosa_chinensis	RchiOBHm_Chr2g0095461
rosa_laevigata	RLG00000016569
rosa_multiflora	Rmu_sc0006076.1_g000012
rosa_roxburghii	Rroxscaffold_2G00146320
rosa_rugosa	Rorug02G0051300
rosa_samantha	Rh2DG100200
rosa_wichuraiana	Rw2G007520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	33
Acc65I	GGTACC	1 cut(s)	573
AccB1I	GGYRCC	2 cut(s)	573, 666
AccB7I	CCANNNNNTGG	2 cut(s)	569, 606
AclWI	GGATC	5 cut(s)	269, 590, 625, 719, 752
AcsI	RAATTY	3 cut(s)	77, 348, 736
AcyI	GRCGYC	1 cut(s)	667
AfaI	GTAC	2 cut(s)	59, 575
AfiI	CCNNNNNNNGG	3 cut(s)	451, 569, 606
AgsI	TTSAA	1 cut(s)	371
AjnI	CCWGG	7 cut(s)	6, 85, 196, 235, 511, 577, 760
AluBI	AGCT	4 cut(s)	204, 305, 310, 538
AluI	AGCT	4 cut(s)	204, 305, 310, 538
AlwI	GGATC	5 cut(s)	269, 590, 625, 719, 752
AlwNI	CAGNNNCTG	2 cut(s)	344, 761
AoxI	GGCC	2 cut(s)	3, 182
ApeKI	GCWGC	2 cut(s)	228, 538
ApoI	RAATTY	3 cut(s)	77, 348, 736
ArsI	GACNNNNNNTTYG	2 cut(s)	134, 166
AseI	ATTAAT	1 cut(s)	467
Asp718I	GGTACC	1 cut(s)	573
AspLEI	GCGC	1 cut(s)	669
AspS9I	GGNCC	1 cut(s)	4
AsuHPI	GGTGA	3 cut(s)	198, 251, 425
BaeI	ACNNNNGTAYC	2 cut(s)	565, 598
BanI	GGYRCC	2 cut(s)	573, 666
BbvI	GCAGC	2 cut(s)	240, 525
BccI	CCATC	5 cut(s)	41, 218, 318, 486, 736
BciT130I	CCWGG	7 cut(s)	8, 87, 198, 237, 513, 579, 762
BfoI	RGCGCY	1 cut(s)	670
BfuAI	ACCTGC	1 cut(s)	33
BisI	GCNGC	2 cut(s)	229, 539
BlpI	GCTNAGC	1 cut(s)	306
BlsI	GCNGC	2 cut(s)	230, 540
Bme1390I	CCNGG	7 cut(s)	8, 87, 198, 237, 513, 579, 762
BmgT120I	GGNCC	1 cut(s)	4
BmiI	GGNNCC	2 cut(s)	575, 668
BmrFI	CCNGG	7 cut(s)	8, 87, 198, 237, 513, 579, 762
BmsI	GCATC	1 cut(s)	303
BplI	GAGNNNNNCTC	2 cut(s)	380, 412
BpmI	CTGGAG	1 cut(s)	195
Bpu10I	CCTNAGC	2 cut(s)	534, 624
Bpu1102I	GCTNAGC	1 cut(s)	306
BsaHI	GRCGYC	1 cut(s)	667
BsaJI	CCNNGG	7 cut(s)	6, 71, 85, 259, 511, 512, 577
Bsc4I	CCNNNNNNNGG	3 cut(s)	451, 569, 606
Bse1I	ACTGG	1 cut(s)	126
Bse3DI	GCAATG	2 cut(s)	336, 681
BseBI	CCWGG	7 cut(s)	8, 87, 198, 237, 513, 579, 762
BseDI	CCNNGG	7 cut(s)	6, 71, 85, 259, 511, 512, 577
BseGI	GGATG	1 cut(s)	33
BseLI	CCNNNNNNNGG	3 cut(s)	451, 569, 606
BseMI	GCAATG	2 cut(s)	336, 681
BseMII	CTCAG	3 cut(s)	270, 297, 615
BseNI	ACTGG	1 cut(s)	126
BseXI	GCAGC	2 cut(s)	240, 525
BseYI	CCCAGC	1 cut(s)	109
BsgI	GTGCAG	2 cut(s)	6, 476
BshFI	GGCC	2 cut(s)	5, 184
BshNI	GGYRCC	2 cut(s)	573, 666
BslI	CCNNNNNNNGG	3 cut(s)	451, 569, 606
BsnI	GGCC	2 cut(s)	5, 184
Bsp143I	GATC	5 cut(s)	274, 595, 617, 724, 757
Bsp1720I	GCTNAGC	1 cut(s)	306
BspANI	GGCC	2 cut(s)	5, 184
BspCNI	CTCAG	3 cut(s)	271, 298, 616
BspLI	GGNNCC	2 cut(s)	575, 668
BspMI	ACCTGC	1 cut(s)	33
BspPI	GGATC	5 cut(s)	269, 590, 625, 719, 752
BspT107I	GGYRCC	2 cut(s)	573, 666
BsrDI	GCAATG	2 cut(s)	336, 681
BsrI	ACTGG	1 cut(s)	126
BssECI	CCNNGG	7 cut(s)	6, 71, 85, 259, 511, 512, 577
BssMI	GATC	5 cut(s)	274, 595, 617, 724, 757
BssNI	GRCGYC	1 cut(s)	667
BssT1I	CCWWGG	1 cut(s)	259
Bst2UI	CCWGG	7 cut(s)	8, 87, 198, 237, 513, 579, 762
Bst6I	CTCTTC	1 cut(s)	607
BstACI	GRCGYC	1 cut(s)	667
BstC8I	GCNNGC	3 cut(s)	107, 336, 681
BstDEI	CTNAG	4 cut(s)	279, 306, 534, 624
BstF5I	GGATG	1 cut(s)	33
BstH2I	RGCGCY	1 cut(s)	670
BstHHI	GCGC	1 cut(s)	669
BstKTI	GATC	5 cut(s)	277, 598, 620, 727, 760
BstMBI	GATC	5 cut(s)	274, 595, 617, 724, 757
BstMWI	GCNNNNNNNGC	4 cut(s)	335, 538, 680, 752
BstNI	CCWGG	7 cut(s)	8, 87, 198, 237, 513, 579, 762
BstNSI	RCATGY	1 cut(s)	109
BstSCI	CCNGG	7 cut(s)	6, 85, 196, 235, 511, 577, 760
BstV1I	GCAGC	2 cut(s)	240, 525
BstX2I	RGATCY	3 cut(s)	617, 724, 757
BstYI	RGATCY	3 cut(s)	617, 724, 757
BsuRI	GGCC	2 cut(s)	5, 184
BtsCI	GGATG	1 cut(s)	33
BtsI	GCAGTG	2 cut(s)	345, 766
BtsIMutI	CAGTG	2 cut(s)	345, 766
BveI	ACCTGC	1 cut(s)	33
Cac8I	GCNNGC	3 cut(s)	107, 336, 681
CaiI	CAGNNNCTG	2 cut(s)	344, 761
CfoI	GCGC	1 cut(s)	669
Cfr13I	GGNCC	1 cut(s)	4
Csp6I	GTAC	2 cut(s)	58, 574
CviAII	CATG	5 cut(s)	102, 106, 317, 399, 601
CviQI	GTAC	2 cut(s)	58, 574
DdeI	CTNAG	4 cut(s)	279, 306, 534, 624
DinI	GGCGCC	1 cut(s)	668
DpnI	GATC	5 cut(s)	276, 597, 619, 726, 759
DpnII	GATC	5 cut(s)	274, 595, 617, 724, 757
DraI	TTTAAA	1 cut(s)	132
Eam1104I	CTCTTC	1 cut(s)	607
EarI	CTCTTC	1 cut(s)	607
Eco130I	CCWWGG	1 cut(s)	259
EcoRI	GAATTC	1 cut(s)	348
EcoRII	CCWGG	7 cut(s)	6, 85, 196, 235, 511, 577, 760
EcoT14I	CCWWGG	1 cut(s)	259
EcoT22I	ATGCAT	2 cut(s)	107, 318
EgeI	GGCGCC	1 cut(s)	668
EheI	GGCGCC	1 cut(s)	668
ErhI	CCWWGG	1 cut(s)	259
FaeI	CATG	5 cut(s)	105, 109, 320, 402, 604
FatI	CATG	5 cut(s)	101, 105, 316, 398, 600
Fnu4HI	GCNGC	2 cut(s)	229, 539
FokI	GGATG	1 cut(s)	20
Fsp4HI	GCNGC	2 cut(s)	229, 539
GlaI	GCGC	1 cut(s)	668
GluI	GCNGC	2 cut(s)	229, 539
GsaI	CCCAGC	1 cut(s)	113
GsuI	CTGGAG	1 cut(s)	195
HaeII	RGCGCY	1 cut(s)	670
HaeIII	GGCC	2 cut(s)	5, 184
HhaI	GCGC	1 cut(s)	669
Hin1I	GRCGYC	1 cut(s)	667
Hin1II	CATG	5 cut(s)	105, 109, 320, 402, 604
Hin6I	GCGC	1 cut(s)	667
HinP1I	GCGC	1 cut(s)	667
HphI	GGTGA	3 cut(s)	198, 251, 425
Hpy166II	GTNNAC	1 cut(s)	164
Hpy188I	TCNGA	3 cut(s)	51, 75, 274
Hpy188III	TCNNGA	6 cut(s)	176, 212, 278, 345, 359, 623
Hpy8I	GTNNAC	1 cut(s)	164
HpyAV	CCTTC	2 cut(s)	242, 480
HpyF10VI	GCNNNNNNNGC	4 cut(s)	335, 538, 680, 752
HpyF3I	CTNAG	4 cut(s)	279, 306, 534, 624
Hsp92I	GRCGYC	1 cut(s)	667
Hsp92II	CATG	5 cut(s)	105, 109, 320, 402, 604
HspAI	GCGC	1 cut(s)	667
KasI	GGCGCC	1 cut(s)	666
KpnI	GGTACC	1 cut(s)	577
Kzo9I	GATC	5 cut(s)	274, 595, 617, 724, 757
Lsp1109I	GCAGC	2 cut(s)	240, 525
LweI	GCATC	1 cut(s)	303
MaeIII	GTNAC	2 cut(s)	282, 764
MalI	GATC	5 cut(s)	276, 597, 619, 726, 759
MboI	GATC	5 cut(s)	274, 595, 617, 724, 757
MboII	GAAGA	3 cut(s)	126, 129, 624
MflI	RGATCY	3 cut(s)	617, 724, 757
MluCI	AATT	6 cut(s)	77, 92, 348, 354, 504, 736
Mly113I	GGCGCC	1 cut(s)	667
MnlI	CCTC	7 cut(s)	81, 183, 219, 400, 475, 552, 608
Mph1103I	ATGCAT	2 cut(s)	107, 318
MseI	TTAA	4 cut(s)	95, 131, 467, 507
MspR9I	CCNGG	7 cut(s)	8, 87, 198, 237, 513, 579, 762
MvaI	CCWGG	7 cut(s)	8, 87, 198, 237, 513, 579, 762
MwoI	GCNNNNNNNGC	4 cut(s)	335, 538, 680, 752
NarI	GGCGCC	1 cut(s)	667
NdeII	GATC	5 cut(s)	274, 595, 617, 724, 757
NlaIII	CATG	5 cut(s)	105, 109, 320, 402, 604
NlaIV	GGNNCC	2 cut(s)	575, 668
NmuCI	GTSAC	1 cut(s)	764
NsiI	ATGCAT	2 cut(s)	107, 318
NspI	RCATGY	1 cut(s)	109
PaeI	GCATGC	1 cut(s)	109
PasI	CCCWGGG	1 cut(s)	512
PflMI	CCANNNNNTGG	2 cut(s)	569, 606
PkrI	GCNGC	2 cut(s)	230, 540
PluTI	GGCGCC	1 cut(s)	670
PshBI	ATTAAT	1 cut(s)	467
Psp6I	CCWGG	7 cut(s)	6, 85, 196, 235, 511, 577, 760
PspFI	CCCAGC	1 cut(s)	109
PspGI	CCWGG	7 cut(s)	6, 85, 196, 235, 511, 577, 760
PspN4I	GGNNCC	2 cut(s)	575, 668
PspPI	GGNCC	1 cut(s)	4
PstNI	CAGNNNCTG	2 cut(s)	344, 761
PsuI	RGATCY	3 cut(s)	617, 724, 757
RsaI	GTAC	2 cut(s)	59, 575
RsaNI	GTAC	2 cut(s)	58, 574
SaqAI	TTAA	4 cut(s)	95, 131, 467, 507
SatI	GCNGC	2 cut(s)	229, 539
Sau3AI	GATC	5 cut(s)	274, 595, 617, 724, 757
Sau96I	GGNCC	1 cut(s)	4
ScrFI	CCNGG	7 cut(s)	8, 87, 198, 237, 513, 579, 762
SetI	ASST	6 cut(s)	47, 206, 211, 307, 312, 540
SfaNI	GCATC	1 cut(s)	303
SfoI	GGCGCC	1 cut(s)	668
SphI	GCATGC	1 cut(s)	109
Sse9I	AATT	6 cut(s)	77, 92, 348, 354, 504, 736
SspDI	GGCGCC	1 cut(s)	666
SspI	AATATT	1 cut(s)	800
StyD4I	CCNGG	7 cut(s)	6, 85, 196, 235, 511, 577, 760
StyI	CCWWGG	1 cut(s)	259
TasI	AATT	6 cut(s)	77, 92, 348, 354, 504, 736
TatI	WGTACW	1 cut(s)	57
Tru1I	TTAA	4 cut(s)	95, 131, 467, 507
Tru9I	TTAA	4 cut(s)	95, 131, 467, 507
TscAI	CASTG	2 cut(s)	345, 773
TseFI	GTSAC	1 cut(s)	764
TseI	GCWGC	2 cut(s)	228, 538
Tsp45I	GTSAC	1 cut(s)	764
TspRI	CASTG	2 cut(s)	345, 773
Van91I	CCANNNNNTGG	2 cut(s)	569, 606
VspI	ATTAAT	1 cut(s)	467
XapI	RAATTY	3 cut(s)	77, 348, 736
XceI	RCATGY	1 cut(s)	109
Zsp2I	ATGCAT	2 cut(s)	107, 318

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.