Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0017128

Physical Location & Seq

Genomic Coordinates Reverse (-)

3938479 .. 3939972

Gene Structure 1494 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0051300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1494 bp

ATGCTAGCAAAACAAGCGTGGAGGATACTGAATCATCCGGGTTCGCTTGTTGCTAGGATCTACAAAGCAAAATATTTTCCGGACACCTCTTTTTGGGAGGCTTTACCTCATGCATCGCCTTCATATTCTTGGAGGAGCATATTCTCTACACGGGAAATTCTTAAAGAAAATTGTTATTGGCAGGTTGGTACAGGTGAGAACATTGATATTTATTCTGATAATTGGGTGGTGGCATTACCTAATGGACGACCCATTTATGTGGGGTTGGCGTCGGGTGGTCGTCGAACGGTGGATGAGTTGATGTGCGAACCTGGTAGGTGGAACATACCCTTGTTAGAGGAGGTGTTCACGGCAGAAGAAGCAGTTGGGATTGCGGAAATTCCGTTGAGTAGAAGAGTAGTGCATGACCGGCTTTGTTGGAAGCTTTCGAAAGATGGAAATTTTTCAGTGAAGACAGCCTATCGATATGCTTTCCTGAAGTCCTCCAGTTACCATCCAATGCATCTCCCTGTTGGCCCGAGTTTCTGGAAAAAGCTTTGGAAAGTGGTCATTCCTAACAAAGCTAAGATTCATGTCTGGCGAGCGTGTCTGGATATACTGCCGTCTTTAGGCAGTTTGGCTTCGAAGCGAGTGGTGGTGGATTCGCCGGCATGCGTGTTATGTGAGGCTCAGTATGAAACTACTATTCATATATGCAGGGACTGTCCCTATACAAGGTTGGTGCTGCAGAAGAATGCCCTGATTTTTCAGGTATGTTACAGTCCTAGTAATATGCATGGGGATGTTATTAGCTGGCTGAATCAGTGTGCTACAGATTTGTCATTAGCTCACTTTGGTGAGTTGTTGTTCTCTATATGGGGAGTTTGGAAGGAAAGAAATGATCGCGTTTGGAATCAAAAGAAATGTGAAGCCCGGGATGTTAGCTTGGGGATTGTCTCTCGGTTGCAGGAATTTAGGTTCCATACCATGCAGCTGTCGCACCCTAAACTTGCAGGTAGAGCAGTGTGGAGGGCGCCTCCAGTGGGGTTGATTAAGATCAATGTGGATGGTGCATTTCATCATGTCACTAGGAAAGGTGGTGTGGGTTTTGTGATTAGAAACGAGGTTGGGATGATGTTAGGCGGTGGGGCTGGGCCGTTGAGTGGGTTGCTGTCACCGGAACATGCGGAAATTTTAGCATGCAAAGCAGCGTTAGAGTTCGCAGGGGAGCATGGCTTTGGTCCGGCTATGTTGGAAACTGATGCATTGGAGGTTCAGCGTCAACTTTCCATGAGTGACTCTGCCAACTTGTCGTTACTGGGCAGAATATATGAGGATGTGGTGGCTCTTTTGGAAGCTCAGAGGGTGGTACAGGTGATACATGTTGGTCGGCGGGGCAATGGGGTCGCGCATTTGTTGGCTACACATGGCCACTCTCTTAGGCAGAATGCCTTTTACTTTTCAATTCCAGATTTCTTACAAGTTGCAATTGCAGCTGAAATTTGTCCAGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009637 GO:0009639 GO:0009765 GO:0009768 GO:0009941 GO:0009987 GO:0010114 GO:0010218 GO:0010287 GO:0015979 GO:0016020 GO:0016168 GO:0019684 GO:0031409 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0034357 GO:0042651 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0046906 GO:0048037 GO:0050896 GO:0055035 GO:0097159 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00196 map00196

Pfam Domains

Protein Families

Chloroa_b-bind

Protein Analysis

497

Amino Acids

55.62

Weight (kDa)

8.79

Isoelectric Point (pI)

39.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RVT	PF13966	148 - 239	2.4e-11	zinc-binding in reverse transcriptase
RVT_3	PF13456	347 - 469	5.5e-22	Reverse transcriptase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017128)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19150
fragaria_vesca	FvH4_1g09040 FvH4_1g09040
malus_domestica	MD02G1095600.v1.1
prunus_persica	Prupe.7G195500_v2.0.a1
pyrus_communis	pycom02g07570
rosa_chinensis	RchiOBHm_Chr2g0095461
rosa_laevigata	RLG00000016569
rosa_multiflora	Rmu_sc0006076.1_g000012
rosa_roxburghii	Rroxscaffold_2G00146320
rosa_rugosa	Rorug02G0051300
rosa_samantha	Rh2DG100200
rosa_wichuraiana	Rw2G007520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	172, 983
AccB1I	GGYRCC	1 cut(s)	1012
AccII	CGCG	2 cut(s)	885, 1388
AccIII	TCCGGA	1 cut(s)	79
AciI	CCGC	4 cut(s)	374, 1122, 1166, 1372
AclWI	GGATC	1 cut(s)	65
AcoI	YGGCCR	1 cut(s)	1408
AcsI	RAATTY	6 cut(s)	156, 378, 439, 950, 1170, 1479
AcuI	CTGAAG	1 cut(s)	497
AcyI	GRCGYC	2 cut(s)	269, 1013
AfaI	GTAC	2 cut(s)	190, 1350
AfiI	CCNNNNNNNGG	5 cut(s)	93, 608, 714, 1022, 1142
AflIII	ACRYGT	1 cut(s)	1360
AgsI	TTSAA	1 cut(s)	1443
AjnI	CCWGG	1 cut(s)	310
AjuI	GAANNNNNNNTTGG	2 cut(s)	348, 380
AleI	CACNNNNGTG	1 cut(s)	834
AloI	GAACNNNNNNTCC	2 cut(s)	941, 973
AluBI	AGCT	9 cut(s)	424, 535, 563, 792, 827, 924, 973, 1337, 1475
AluI	AGCT	9 cut(s)	424, 535, 563, 792, 827, 924, 973, 1337, 1475
Alw26I	GTCTC	1 cut(s)	940
AlwI	GGATC	1 cut(s)	65
AlwNI	CAGNNNCTG	1 cut(s)	702
Ama87I	CYCGRG	2 cut(s)	517, 912
Aor13HI	TCCGGA	1 cut(s)	79
AoxI	GGCC	3 cut(s)	514, 1133, 1408
ApeKI	GCWGC	4 cut(s)	724, 970, 1187, 1472
ApoI	RAATTY	6 cut(s)	156, 378, 439, 950, 1170, 1479
Asp700I	GAANNNNTTC	1 cut(s)	442
AspLEI	GCGC	2 cut(s)	1015, 1390
AspS9I	GGNCC	3 cut(s)	515, 1133, 1220
AsuC2I	CCSGG	3 cut(s)	39, 913, 914
AsuHPI	GGTGA	4 cut(s)	206, 848, 1146, 1366
AsuII	TTCGAA	2 cut(s)	428, 623
AsuNHI	GCTAGC	1 cut(s)	4
AvaI	CYCGRG	2 cut(s)	517, 912
AvaII	GGWCC	1 cut(s)	1220
BalI	TGGCCA	1 cut(s)	1410
BanI	GGYRCC	1 cut(s)	1012
BbsI	GAAGAC	1 cut(s)	458
BbvI	GCAGC	4 cut(s)	711, 982, 1199, 1484
BccI	CCATC	3 cut(s)	428, 501, 1040
BceAI	ACGGC	3 cut(s)	366, 586, 1120
BcgI	CGANNNNNNTGC	2 cut(s)	1366, 1400
BciT130I	CCWGG	1 cut(s)	312
BciVI	GTATCC	1 cut(s)	18
BcnI	CCSGG	3 cut(s)	39, 913, 914
BcoDI	GTCTC	1 cut(s)	940
BfaI	CTAG	4 cut(s)	5, 54, 765, 1068
BfmI	CTRYAG	2 cut(s)	725, 810
BfoI	RGCGCY	1 cut(s)	1016
BfuAI	ACCTGC	2 cut(s)	172, 983
BfuI	GTATCC	1 cut(s)	18
BisI	GCNGC	4 cut(s)	725, 971, 1188, 1473
BlsI	GCNGC	4 cut(s)	726, 972, 1189, 1474
Bme1390I	CCNGG	4 cut(s)	39, 312, 913, 914
Bme18I	GGWCC	1 cut(s)	1220
BmeT110I	CYCGRG	2 cut(s)	517, 912
BmgT120I	GGNCC	3 cut(s)	515, 1133, 1220
BmiI	GGNNCC	2 cut(s)	959, 1014
BmrFI	CCNGG	4 cut(s)	39, 312, 913, 914
BmrI	ACTGGG	1 cut(s)	1307
BmsI	GCATC	3 cut(s)	122, 511, 1231
BmtI	GCTAGC	1 cut(s)	8
BmuI	ACTGGG	1 cut(s)	1307
BpiI	GAAGAC	1 cut(s)	458
BplI	GAGNNNNNCTC	2 cut(s)	1000, 1032
BpmI	CTGGAG	2 cut(s)	469, 1002
Bpu14I	TTCGAA	2 cut(s)	428, 623
BpuMI	CCSGG	3 cut(s)	39, 913, 914
Bsa29I	ATCGAT	1 cut(s)	463
BsaBI	GATNNNNATC	1 cut(s)	1034
BsaHI	GRCGYC	2 cut(s)	269, 1013
BsaJI	CCNNGG	1 cut(s)	912
BsaWI	WCCGGW	2 cut(s)	79, 1156
Bsc4I	CCNNNNNNNGG	5 cut(s)	93, 608, 714, 1022, 1142
Bse118I	RCCGGY	2 cut(s)	408, 646
Bse1I	ACTGG	4 cut(s)	486, 1019, 1302, 1487
Bse3DI	GCAATG	1 cut(s)	1384
Bse8I	GATNNNNATC	1 cut(s)	1034
BseAI	TCCGGA	1 cut(s)	79
BseBI	CCWGG	1 cut(s)	312
BseCI	ATCGAT	1 cut(s)	463
BseDI	CCNNGG	1 cut(s)	912
BseGI	GGATG	8 cut(s)	34, 298, 493, 787, 922, 1051, 1116, 1321
BseJI	GATNNNNATC	1 cut(s)	1034
BseLI	CCNNNNNNNGG	5 cut(s)	93, 608, 714, 1022, 1142
BseMI	GCAATG	1 cut(s)	1384
BseMII	CTCAG	2 cut(s)	683, 1352
BseNI	ACTGG	4 cut(s)	486, 1019, 1302, 1487
BseRI	GAGGAG	2 cut(s)	148, 353
BseXI	GCAGC	4 cut(s)	711, 982, 1199, 1484
BseYI	CCCAGC	1 cut(s)	1130
Bsh1236I	CGCG	2 cut(s)	885, 1388
BshFI	GGCC	3 cut(s)	516, 1135, 1410
BshNI	GGYRCC	1 cut(s)	1012
BshVI	ATCGAT	1 cut(s)	463
BsiHKCI	CYCGRG	2 cut(s)	517, 912
BsiSI	CCGG	7 cut(s)	38, 80, 409, 647, 913, 1157, 1223
BslFI	GGGAC	2 cut(s)	690, 713
BslI	CCNNNNNNNGG	5 cut(s)	93, 608, 714, 1022, 1142
BsmAI	GTCTC	1 cut(s)	940
BsmFI	GGGAC	2 cut(s)	690, 713
BsmI	GAATGC	2 cut(s)	739, 1432
BsnI	GGCC	3 cut(s)	516, 1135, 1410
BsoBI	CYCGRG	2 cut(s)	517, 912
Bsp119I	TTCGAA	2 cut(s)	428, 623
Bsp13I	TCCGGA	1 cut(s)	79
Bsp143I	GATC	3 cut(s)	57, 880, 1035
BspACI	CCGC	4 cut(s)	374, 1122, 1166, 1372
BspANI	GGCC	3 cut(s)	516, 1135, 1410
BspCNI	CTCAG	2 cut(s)	682, 1351
BspDI	ATCGAT	1 cut(s)	463
BspEI	TCCGGA	1 cut(s)	79
BspFNI	CGCG	2 cut(s)	885, 1388
BspLI	GGNNCC	2 cut(s)	959, 1014
BspMAI	CTGCAG	1 cut(s)	729
BspMI	ACCTGC	2 cut(s)	172, 983
BspOI	GCTAGC	1 cut(s)	8
BspPI	GGATC	1 cut(s)	65
BspT104I	TTCGAA	2 cut(s)	428, 623
BspT107I	GGYRCC	1 cut(s)	1012
BsrDI	GCAATG	1 cut(s)	1384
BsrFI	RCCGGY	2 cut(s)	408, 646
BsrI	ACTGG	4 cut(s)	486, 1019, 1302, 1487
BssAI	RCCGGY	2 cut(s)	408, 646
BssECI	CCNNGG	1 cut(s)	912
BssMI	GATC	3 cut(s)	57, 880, 1035
BssNI	GRCGYC	2 cut(s)	269, 1013
Bst2UI	CCWGG	1 cut(s)	312
Bst4CI	ACNGT	3 cut(s)	289, 704, 761
Bst6I	CTCTTC	1 cut(s)	388
BstACI	GRCGYC	2 cut(s)	269, 1013
BstBI	TTCGAA	2 cut(s)	428, 623
BstC8I	GCNNGC	6 cut(s)	6, 582, 648, 652, 794, 1180
BstDEI	CTNAG	4 cut(s)	564, 669, 1338, 1418
BstENI	CCTNNNNNAGG	1 cut(s)	712
BstF5I	GGATG	8 cut(s)	34, 298, 493, 787, 922, 1051, 1116, 1321
BstFNI	CGCG	2 cut(s)	885, 1388
BstH2I	RGCGCY	1 cut(s)	1016
BstHHI	GCGC	2 cut(s)	1015, 1390
BstKTI	GATC	3 cut(s)	60, 883, 1038
BstMAI	GTCTC	1 cut(s)	940
BstMBI	GATC	3 cut(s)	57, 880, 1035
BstMWI	GCNNNNNNNGC	7 cut(s)	14, 359, 409, 976, 998, 1184, 1472
BstNI	CCWGG	1 cut(s)	312
BstNSI	RCATGY	4 cut(s)	654, 1166, 1182, 1364
BstSCI	CCNGG	4 cut(s)	37, 310, 911, 912
BstSFI	CTRYAG	2 cut(s)	725, 810
BstUI	CGCG	2 cut(s)	885, 1388
BstV1I	GCAGC	4 cut(s)	711, 982, 1199, 1484
BstV2I	GAAGAC	1 cut(s)	458
BstX2I	RGATCY	1 cut(s)	57
BstXI	CCANNNNNNTGG	1 cut(s)	259
BstYI	RGATCY	1 cut(s)	57
Bsu15I	ATCGAT	1 cut(s)	463
BsuI	GTATCC	1 cut(s)	18
BsuRI	GGCC	3 cut(s)	516, 1135, 1410
BsuTUI	ATCGAT	1 cut(s)	463
BtgZI	GCGATG	1 cut(s)	99
BtsCI	GGATG	8 cut(s)	34, 298, 493, 787, 922, 1051, 1116, 1321
BtsI	GCAGTG	1 cut(s)	1008
BtsIMutI	CAGTG	5 cut(s)	453, 809, 1008, 1026, 1494
BveI	ACCTGC	2 cut(s)	172, 983
Cac8I	GCNNGC	6 cut(s)	6, 582, 648, 652, 794, 1180
CaiI	CAGNNNCTG	1 cut(s)	702
CfoI	GCGC	2 cut(s)	1015, 1390
Cfr10I	RCCGGY	2 cut(s)	408, 646
Cfr13I	GGNCC	3 cut(s)	515, 1133, 1220
Cfr9I	CCCGGG	1 cut(s)	912
ClaI	ATCGAT	1 cut(s)	463
CseI	GACGC	2 cut(s)	258, 1247
CsiI	ACCWGGT	1 cut(s)	310
Csp6I	GTAC	2 cut(s)	189, 1349
CviQI	GTAC	2 cut(s)	189, 1349
DdeI	CTNAG	4 cut(s)	564, 669, 1338, 1418
DinI	GGCGCC	1 cut(s)	1014
DpnI	GATC	3 cut(s)	59, 882, 1037
DpnII	GATC	3 cut(s)	57, 880, 1035
EaeI	YGGCCR	1 cut(s)	1408
Eam1104I	CTCTTC	1 cut(s)	388
EarI	CTCTTC	1 cut(s)	388
Eco47I	GGWCC	1 cut(s)	1220
Eco57I	CTGAAG	1 cut(s)	497
Eco88I	CYCGRG	2 cut(s)	517, 912
EcoNI	CCTNNNNNAGG	1 cut(s)	712
EcoRII	CCWGG	1 cut(s)	310
EcoT22I	ATGCAT	4 cut(s)	115, 504, 777, 1246
EgeI	GGCGCC	1 cut(s)	1014
EheI	GGCGCC	1 cut(s)	1014
FaqI	GGGAC	2 cut(s)	690, 713
FauI	CCCGC	1 cut(s)	1365
Fnu4HI	GCNGC	4 cut(s)	725, 971, 1188, 1473
FokI	GGATG	8 cut(s)	21, 305, 480, 794, 929, 1058, 1123, 1328
Fsp4HI	GCNGC	4 cut(s)	725, 971, 1188, 1473
FspBI	CTAG	4 cut(s)	5, 54, 765, 1068
GlaI	GCGC	2 cut(s)	1014, 1389
GluI	GCNGC	4 cut(s)	725, 971, 1188, 1473
GsaI	CCCAGC	1 cut(s)	1134
GsuI	CTGGAG	2 cut(s)	469, 1002
HaeII	RGCGCY	1 cut(s)	1016
HaeIII	GGCC	3 cut(s)	516, 1135, 1410
HapII	CCGG	7 cut(s)	38, 80, 409, 647, 913, 1157, 1223
HgaI	GACGC	2 cut(s)	258, 1247
HhaI	GCGC	2 cut(s)	1015, 1390
Hin1I	GRCGYC	2 cut(s)	269, 1013
Hin6I	GCGC	2 cut(s)	1013, 1388
HinP1I	GCGC	2 cut(s)	1013, 1388
HincII	GTYRAC	1 cut(s)	1262
HindII	GTYRAC	1 cut(s)	1262
HindIII	AAGCTT	2 cut(s)	422, 533
HinfI	GANTC	6 cut(s)	31, 568, 641, 799, 892, 1277
HpaII	CCGG	7 cut(s)	38, 80, 409, 647, 913, 1157, 1223
HphI	GGTGA	4 cut(s)	206, 848, 1146, 1366
Hpy166II	GTNNAC	2 cut(s)	348, 1262
Hpy188I	TCNGA	2 cut(s)	217, 1341
Hpy188III	TCNNGA	5 cut(s)	80, 475, 526, 590, 1448
Hpy8I	GTNNAC	2 cut(s)	348, 1262
Hpy99I	CGWCG	2 cut(s)	274, 285
HpyAV	CCTTC	2 cut(s)	129, 862
HpyCH4III	ACNGT	3 cut(s)	289, 704, 761
HpyF10VI	GCNNNNNNNGC	7 cut(s)	14, 359, 409, 976, 998, 1184, 1472
HpyF3I	CTNAG	4 cut(s)	564, 669, 1338, 1418
Hsp92I	GRCGYC	2 cut(s)	269, 1013
HspAI	GCGC	2 cut(s)	1013, 1388
KasI	GGCGCC	1 cut(s)	1012
Kpn2I	TCCGGA	1 cut(s)	79
KroI	GCCGGC	1 cut(s)	646
KroNI	GCCGGC	1 cut(s)	648
Kzo9I	GATC	3 cut(s)	57, 880, 1035
LmnI	GCTCC	2 cut(s)	135, 1207
Lsp1109I	GCAGC	4 cut(s)	711, 982, 1199, 1484
LweI	GCATC	3 cut(s)	122, 511, 1231
MabI	ACCWGGT	1 cut(s)	310
MaeI	CTAG	4 cut(s)	5, 54, 765, 1068
MaeIII	GTNAC	6 cut(s)	488, 755, 1063, 1152, 1274, 1293
MalI	GATC	3 cut(s)	59, 882, 1037
MboI	GATC	3 cut(s)	57, 880, 1035
MboII	GAAGA	4 cut(s)	368, 405, 463, 742
MfeI	CAATTG	1 cut(s)	1467
MflI	RGATCY	1 cut(s)	57
MlsI	TGGCCA	1 cut(s)	1410
MluNI	TGGCCA	1 cut(s)	1410
Mly113I	GGCGCC	1 cut(s)	1013
MlyI	GAGTC	1 cut(s)	1271
MmeI	TCCRAC	2 cut(s)	398, 1212
Mox20I	TGGCCA	1 cut(s)	1410
Mph1103I	ATGCAT	4 cut(s)	115, 504, 777, 1246
MroI	TCCGGA	1 cut(s)	79
MroNI	GCCGGC	1 cut(s)	646
MroXI	GAANNNNTTC	1 cut(s)	442
MscI	TGGCCA	1 cut(s)	1410
MseI	TTAA	2 cut(s)	162, 1032
MslI	CAYNNNNRTG	3 cut(s)	257, 780, 834
Msp20I	TGGCCA	1 cut(s)	1410
MspA1I	CMGCKG	2 cut(s)	973, 1475
MspI	CCGG	7 cut(s)	38, 80, 409, 647, 913, 1157, 1223
MspR9I	CCNGG	4 cut(s)	39, 312, 913, 914
MunI	CAATTG	1 cut(s)	1467
Mva1269I	GAATGC	2 cut(s)	739, 1432
MvaI	CCWGG	1 cut(s)	312
MvnI	CGCG	2 cut(s)	885, 1388
MwoI	GCNNNNNNNGC	7 cut(s)	14, 359, 409, 976, 998, 1184, 1472
NaeI	GCCGGC	1 cut(s)	648
NarI	GGCGCC	1 cut(s)	1013
NciI	CCSGG	3 cut(s)	39, 913, 914
NdeII	GATC	3 cut(s)	57, 880, 1035
NgoMIV	GCCGGC	1 cut(s)	646
NheI	GCTAGC	1 cut(s)	4
NlaIV	GGNNCC	2 cut(s)	959, 1014
NmuCI	GTSAC	3 cut(s)	1063, 1152, 1274
NsiI	ATGCAT	4 cut(s)	115, 504, 777, 1246
NspI	RCATGY	4 cut(s)	654, 1166, 1182, 1364
NspV	TTCGAA	2 cut(s)	428, 623
OliI	CACNNNNGTG	1 cut(s)	834
PaeI	GCATGC	2 cut(s)	654, 1182
PciI	ACATGT	1 cut(s)	1360
PctI	GAATGC	2 cut(s)	739, 1432
PdiI	GCCGGC	1 cut(s)	648
PdmI	GAANNNNTTC	1 cut(s)	442
PfeI	GAWTC	5 cut(s)	31, 568, 641, 799, 892
PkrI	GCNGC	4 cut(s)	726, 972, 1189, 1474
PleI	GAGTC	1 cut(s)	1271
PluTI	GGCGCC	1 cut(s)	1016
PpsI	GAGTC	1 cut(s)	1271
PscI	ACATGT	1 cut(s)	1360
Psp6I	CCWGG	1 cut(s)	310
PspFI	CCCAGC	1 cut(s)	1130
PspGI	CCWGG	1 cut(s)	310
PspN4I	GGNNCC	2 cut(s)	959, 1014
PspPI	GGNCC	3 cut(s)	515, 1133, 1220
PstI	CTGCAG	1 cut(s)	729
PstNI	CAGNNNCTG	1 cut(s)	702
PsuI	RGATCY	1 cut(s)	57
PvuII	CAGCTG	2 cut(s)	973, 1475
RsaI	GTAC	2 cut(s)	190, 1350
RsaNI	GTAC	2 cut(s)	189, 1349
RseI	CAYNNNNRTG	3 cut(s)	257, 780, 834
SaqAI	TTAA	2 cut(s)	162, 1032
SatI	GCNGC	4 cut(s)	725, 971, 1188, 1473
Sau3AI	GATC	3 cut(s)	57, 880, 1035
Sau96I	GGNCC	3 cut(s)	515, 1133, 1220
SchI	GAGTC	1 cut(s)	1271
ScrFI	CCNGG	4 cut(s)	39, 312, 913, 914
SexAI	ACCWGGT	1 cut(s)	310
SfaNI	GCATC	3 cut(s)	122, 511, 1231
SfcI	CTRYAG	2 cut(s)	725, 810
SfoI	GGCGCC	1 cut(s)	1014
SfuI	TTCGAA	2 cut(s)	428, 623
SinI	GGWCC	1 cut(s)	1220
SmaI	CCCGGG	1 cut(s)	914
SmiMI	CAYNNNNRTG	3 cut(s)	257, 780, 834
SphI	GCATGC	2 cut(s)	654, 1182
SsiI	CCGC	4 cut(s)	374, 1122, 1166, 1372
SspDI	GGCGCC	1 cut(s)	1012
SspI	AATATT	1 cut(s)	74
SspMI	CTAG	4 cut(s)	5, 54, 765, 1068
StyD4I	CCNGG	4 cut(s)	37, 310, 911, 912
TaaI	ACNGT	3 cut(s)	289, 704, 761
TaqI	TCGA	4 cut(s)	283, 428, 463, 623
TfiI	GAWTC	5 cut(s)	31, 568, 641, 799, 892
Tru1I	TTAA	2 cut(s)	162, 1032
Tru9I	TTAA	2 cut(s)	162, 1032
TscAI	CASTG	5 cut(s)	453, 809, 1008, 1026, 1494
TseFI	GTSAC	3 cut(s)	1063, 1152, 1274
TseI	GCWGC	4 cut(s)	724, 970, 1187, 1472
Tsp45I	GTSAC	3 cut(s)	1063, 1152, 1274
TspDTI	ATGAA	5 cut(s)	111, 560, 677, 690, 1046
TspGWI	ACGGA	1 cut(s)	372
TspMI	CCCGGG	1 cut(s)	912
TspRI	CASTG	5 cut(s)	453, 809, 1008, 1026, 1494
VpaK11BI	GGWCC	1 cut(s)	1220
XagI	CCTNNNNNAGG	1 cut(s)	712
XapI	RAATTY	6 cut(s)	156, 378, 439, 950, 1170, 1479
XceI	RCATGY	4 cut(s)	654, 1166, 1182, 1364
XmaI	CCCGGG	1 cut(s)	912
XmnI	GAANNNNTTC	1 cut(s)	442
XspI	CTAG	4 cut(s)	5, 54, 765, 1068
Zsp2I	ATGCAT	4 cut(s)	115, 504, 777, 1246

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.