Prupe.7G196600_v2.0.a1

Protein of unknown function (DUF1677)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
18565590 .. 18567201
1612 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G196600.1

Sequence Viewer

Length: 462 bp
ATGGCTCTTACAACAAGTTCAGAGTCTCATTCAACCTCTACAAAACCAACCCCAACTCCTCCACCAATCGAAGTCGAGTGTGTGAAATGCGACTCTTGTGGGTTCACGGAGGATTGCACCCCTGCATACATCTCACGAGTCCGGGATCGTTACCAGGGCCGTTGGATATGTGGGCTCTGCGTTGAGGCAGTGAAAGATGAAGTCTTGAGATCAGATAGGCTCATCTCCACCGAAGAAGCCCTGAACCGCCACATAAATTTTTGCAGGAAGTTCAGATCATCAAGTCCTCTGCATAAAGAAACAGAGCACCCCATCCTTGCCATGGGTCGGGTTTTCAGGCGGAGCTTGGACAGTCCGAGAGCTCTCAGGTCAAATTCTAGCTCTTCTCTTGATGGTGTCGAAAGTGTTCGCGGCCCAGCGCTTGTTCGTTCAGGAAGTTGCTTCTCTTCTCTGTCTAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

154

Amino Acids

16.98

Weight (kDa)

8.7

Isoelectric Point (pI)

84.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013373)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 411
AciI CCGC 3 cut(s) 247, 340, 411
AclWI GGATC 1 cut(s) 153
AcsI RAATTY 2 cut(s) 256, 373
AfeI AGCGCT 1 cut(s) 420
AfiI CCNNNNNNNGG 2 cut(s) 322, 327
AgsI TTSAA 1 cut(s) 33
AjnI CCWGG 1 cut(s) 153
AluBI AGCT 3 cut(s) 345, 362, 381
AluI AGCT 3 cut(s) 345, 362, 381
Alw21I GWGCWC 2 cut(s) 309, 364
Alw26I GTCTC 1 cut(s) 30
AlwI GGATC 1 cut(s) 153
Aor51HI AGCGCT 1 cut(s) 420
AoxI GGCC 2 cut(s) 157, 412
ApoI RAATTY 2 cut(s) 256, 373
Asp700I GAANNNNTTC 1 cut(s) 405
AspLEI GCGC 1 cut(s) 421
AspS9I GGNCC 2 cut(s) 157, 413
AsuC2I CCSGG 1 cut(s) 143
BanII GRGCYC 2 cut(s) 177, 364
BauI CACGAG 1 cut(s) 135
Bbv12I GWGCWC 2 cut(s) 309, 364
BccI CCATC 2 cut(s) 320, 386
BceAI ACGGC 1 cut(s) 144
BciT130I CCWGG 1 cut(s) 155
BcnI CCSGG 1 cut(s) 143
BcoDI GTCTC 1 cut(s) 30
BfaI CTAG 2 cut(s) 378, 456
BfoI RGCGCY 1 cut(s) 422
BisI GCNGC 1 cut(s) 412
BlsI GCNGC 1 cut(s) 413
Bme1390I CCNGG 2 cut(s) 143, 155
BmgT120I GGNCC 2 cut(s) 157, 413
BmrFI CCNGG 2 cut(s) 143, 155
BpuEI CTTGAG 1 cut(s) 226
BpuMI CCSGG 1 cut(s) 143
BsaJI CCNNGG 2 cut(s) 154, 321
BsaXI ACNNNNNCTCC 2 cut(s) 40, 70
Bsc4I CCNNNNNNNGG 2 cut(s) 322, 327
BseBI CCWGG 1 cut(s) 155
BseDI CCNNGG 2 cut(s) 154, 321
BseGI GGATG 1 cut(s) 312
BseLI CCNNNNNNNGG 2 cut(s) 322, 327
BseMII CTCAG 1 cut(s) 379
BseRI GAGGAG 1 cut(s) 48
BseYI CCCAGC 1 cut(s) 415
Bsh1236I CGCG 1 cut(s) 411
BshFI GGCC 2 cut(s) 159, 414
BsiHKAI GWGCWC 2 cut(s) 309, 364
BsiSI CCGG 1 cut(s) 142
BslI CCNNNNNNNGG 2 cut(s) 322, 327
BsmAI GTCTC 1 cut(s) 30
BsnI GGCC 2 cut(s) 159, 414
Bsp1286I GDGCHC 3 cut(s) 177, 309, 364
Bsp143I GATC 3 cut(s) 145, 209, 275
Bsp19I CCATGG 1 cut(s) 321
BspACI CCGC 3 cut(s) 247, 340, 411
BspANI GGCC 2 cut(s) 159, 414
BspCNI CTCAG 1 cut(s) 378
BspFNI CGCG 1 cut(s) 411
BspPI GGATC 1 cut(s) 153
BspQI GCTCTTC 1 cut(s) 388
BssECI CCNNGG 2 cut(s) 154, 321
BssMI GATC 3 cut(s) 145, 209, 275
BssSI CACGAG 1 cut(s) 135
BssT1I CCWWGG 1 cut(s) 321
Bst2BI CACGAG 1 cut(s) 135
Bst2UI CCWGG 1 cut(s) 155
Bst4CI ACNGT 1 cut(s) 353
Bst6I CTCTTC 2 cut(s) 388, 451
BstDEI CTNAG 1 cut(s) 365
BstDSI CCRYGG 1 cut(s) 321
BstF5I GGATG 1 cut(s) 312
BstFNI CGCG 1 cut(s) 411
BstH2I RGCGCY 1 cut(s) 422
BstHHI GCGC 1 cut(s) 421
BstKTI GATC 3 cut(s) 148, 212, 278
BstMAI GTCTC 1 cut(s) 30
BstMBI GATC 3 cut(s) 145, 209, 275
BstNI CCWGG 1 cut(s) 155
BstSCI CCNGG 2 cut(s) 141, 153
BstUI CGCG 1 cut(s) 411
BsuRI GGCC 2 cut(s) 159, 414
BtgI CCRYGG 1 cut(s) 321
BtsCI GGATG 1 cut(s) 312
BtsI GCAGTG 1 cut(s) 195
BtsIMutI CAGTG 1 cut(s) 195
CfoI GCGC 1 cut(s) 421
Cfr13I GGNCC 2 cut(s) 157, 413
CviAII CATG 1 cut(s) 322
CviJI RGCY 9 cut(s) 5, 159, 175, 220, 239, 345, 362, 381, 414
CviKI_1 RGCY 9 cut(s) 5, 159, 175, 220, 239, 345, 362, 381, 414
DdeI CTNAG 1 cut(s) 365
DpnI GATC 3 cut(s) 147, 211, 277
DpnII GATC 3 cut(s) 145, 209, 275
Eam1104I CTCTTC 2 cut(s) 388, 451
EarI CTCTTC 2 cut(s) 388, 451
EciI GGCGGA 1 cut(s) 355
Ecl136II GAGCTC 1 cut(s) 362
Eco130I CCWWGG 1 cut(s) 321
Eco24I GRGCYC 2 cut(s) 177, 364
Eco47III AGCGCT 1 cut(s) 420
Eco53kI GAGCTC 1 cut(s) 362
EcoICRI GAGCTC 1 cut(s) 362
EcoRII CCWGG 1 cut(s) 153
EcoT14I CCWWGG 1 cut(s) 321
EcoT38I GRGCYC 2 cut(s) 177, 364
ErhI CCWWGG 1 cut(s) 321
FaeI CATG 1 cut(s) 325
FaiI YATR 5 cut(s) 127, 169, 254, 294, 323
FatI CATG 1 cut(s) 321
Fnu4HI GCNGC 1 cut(s) 412
FokI GGATG 1 cut(s) 299
FriOI GRGCYC 2 cut(s) 177, 364
Fsp4HI GCNGC 1 cut(s) 412
FspBI CTAG 2 cut(s) 378, 456
GlaI GCGC 1 cut(s) 420
GluI GCNGC 1 cut(s) 412
GsaI CCCAGC 1 cut(s) 419
HaeII RGCGCY 1 cut(s) 422
HaeIII GGCC 2 cut(s) 159, 414
HapII CCGG 1 cut(s) 142
HhaI GCGC 1 cut(s) 421
Hin1II CATG 1 cut(s) 325
Hin6I GCGC 1 cut(s) 419
HinP1I GCGC 1 cut(s) 419
HinfI GANTC 3 cut(s) 23, 92, 138
HpaII CCGG 1 cut(s) 142
Hpy166II GTNNAC 1 cut(s) 105
Hpy188I TCNGA 4 cut(s) 22, 214, 275, 357
Hpy188III TCNNGA 4 cut(s) 135, 205, 389, 432
Hpy8I GTNNAC 1 cut(s) 105
HpyCH4III ACNGT 1 cut(s) 353
HpyCH4V TGCA 4 cut(s) 117, 125, 264, 292
HpyF3I CTNAG 1 cut(s) 365
Hsp92II CATG 1 cut(s) 325
HspAI GCGC 1 cut(s) 419
Kzo9I GATC 3 cut(s) 145, 209, 275
LguI GCTCTTC 1 cut(s) 388
LmnI GCTCC 1 cut(s) 342
MaeI CTAG 2 cut(s) 378, 456
MaeIII GTNAC 1 cut(s) 149
MalI GATC 3 cut(s) 147, 211, 277
MboI GATC 3 cut(s) 145, 209, 275
MboII GAAGA 3 cut(s) 245, 375, 438
MhlI GDGCHC 3 cut(s) 177, 309, 364
MluCI AATT 2 cut(s) 256, 373
MlyI GAGTC 3 cut(s) 32, 86, 147
MmeI TCCRAC 1 cut(s) 143
MnlI CCTC 5 cut(s) 46, 69, 103, 178, 297
MroXI GAANNNNTTC 1 cut(s) 405
MspI CCGG 1 cut(s) 142
MspR9I CCNGG 2 cut(s) 143, 155
MvaI CCWGG 1 cut(s) 155
MvnI CGCG 1 cut(s) 411
NciI CCSGG 1 cut(s) 143
NcoI CCATGG 1 cut(s) 321
NdeII GATC 3 cut(s) 145, 209, 275
NlaIII CATG 1 cut(s) 325
PciSI GCTCTTC 1 cut(s) 388
PdmI GAANNNNTTC 1 cut(s) 405
PfoI TCCNGGA 1 cut(s) 141
PkrI GCNGC 1 cut(s) 413
PleI GAGTC 3 cut(s) 31, 86, 146
PpsI GAGTC 3 cut(s) 31, 86, 146
Psp124BI GAGCTC 1 cut(s) 364
Psp6I CCWGG 1 cut(s) 153
PspFI CCCAGC 1 cut(s) 415
PspGI CCWGG 1 cut(s) 153
PspPI GGNCC 2 cut(s) 157, 413
SacI GAGCTC 1 cut(s) 364
SapI GCTCTTC 1 cut(s) 388
SatI GCNGC 1 cut(s) 412
Sau3AI GATC 3 cut(s) 145, 209, 275
Sau96I GGNCC 2 cut(s) 157, 413
SchI GAGTC 3 cut(s) 32, 86, 147
ScrFI CCNGG 2 cut(s) 143, 155
SduI GDGCHC 3 cut(s) 177, 309, 364
SetI ASST 6 cut(s) 38, 347, 364, 371, 383, 461
SmlI CTYRAG 1 cut(s) 205
SmoI CTYRAG 1 cut(s) 205
Sse9I AATT 2 cut(s) 256, 373
SsiI CCGC 3 cut(s) 247, 340, 411
SspMI CTAG 2 cut(s) 378, 456
SstI GAGCTC 1 cut(s) 364
StyD4I CCNGG 2 cut(s) 141, 153
StyI CCWWGG 1 cut(s) 321
TaaI ACNGT 1 cut(s) 353
TaqI TCGA 3 cut(s) 69, 75, 399
TasI AATT 2 cut(s) 256, 373
TauI GCSGC 1 cut(s) 414
TscAI CASTG 1 cut(s) 195
TspDTI ATGAA 1 cut(s) 213
TspGWI ACGGA 1 cut(s) 122
TspRI CASTG 1 cut(s) 195
XapI RAATTY 2 cut(s) 256, 373
XcmI CCANNNNNNNNNTGG 1 cut(s) 319
XmnI GAANNNNTTC 1 cut(s) 405
XspI CTAG 2 cut(s) 378, 456
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.