Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0010195

Physical Location & Seq

Genomic Coordinates Reverse (-)

18576858 .. 18579387

Gene Structure 2530 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G196900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 621 bp

ATGGCAGCAAAACCGAGTGTGATTAAGCCTATCATTAGCAAGATGTATTGTTCTTCTTCTCAGGCTGTGCTTGCGGTAAGGAGGAGGCCACACGTAATAAATGGAGGTGGTTTTGTGGTCACAGATTGTAGTCAGAATCAGAAGGTTGCTTTCAGGGTTGATGGATGTGGAATTCTGGGCACGAAAGATGAGATGATTCTGAGGGATGGTCATGGAGACGCTTTGCTTCTCATTCGTCGAAAGGGAGCAATGGTTGAGGCACTAAGCATTTACAGGAAATGGAAGGGCTACACTTTAGACTATGAAGGATCACAAGATCAGTTGGTTTTCTGTTTGAAAGAGCCAAACTCCTGTTTGGCAAGAACTCATGCAATCAGAATCTCCACCAAGGCTAGGCAAAACAAAGACTGGGACTTTGAGATCAAGGGATATTTTCCTGATAAAGATTGTAGCATTGTTGACTCAAGAGGCAACACAATGGCACAGATAGGGGTGAAGAAGGAGTTGATGGCAAGCAAGGATCTCTACCATGTTGTGGTGACACCAGGCATGGATCACGCTTTTGTTATCGGGGTCATTACCATTCTTGATTACATATATGGTGAATCCACTAGGTGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LOR

Protein Analysis

207

Amino Acids

22.95

Weight (kDa)

9.04

Isoelectric Point (pI)

32.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010195)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G05910
fragaria_vesca	FvH4_1g08870 FvH4_1g08870
malus_domestica	MD02G1093800.v1.1 MD02G1094100.v1.1 MD15G1219000.v1.1
prunus_persica	Prupe.7G196900_v2.0.a1
pyrus_communis	pycom02g07410
rosa_chinensis	RchiOBHm_Chr2g0095331
rosa_laevigata	RLG00000016555
rosa_multiflora	Rmu_ssc0000183.1_g000033
rosa_roxburghii	Rroxscaffold_2G00146470
rosa_rugosa	Rorug02G0049500 Rorug02G0049500 Rorug02G0049600 Rorug02G0049700
rosa_samantha	Rh2AG097800 Rh2BG099000 Rh2CG101100 Rh2DG098700
rosa_wichuraiana	Rw2G007380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	535
AciI	CCGC	1 cut(s)	74
AclWI	GGATC	3 cut(s)	316, 528, 561
AcsI	RAATTY	1 cut(s)	171
AdeI	CACNNNGTG	1 cut(s)	615
AfiI	CCNNNNNNNGG	2 cut(s)	393, 535
AflIII	ACRYGT	1 cut(s)	91
AgsI	TTSAA	1 cut(s)	337
AjnI	CCWGG	1 cut(s)	544
Alw26I	GTCTC	1 cut(s)	210
AlwI	GGATC	3 cut(s)	316, 528, 561
AoxI	GGCC	1 cut(s)	86
ApeKI	GCWGC	1 cut(s)	5
ApoI	RAATTY	1 cut(s)	171
ArsI	GACNNNNNNTTYG	2 cut(s)	398, 430
AsuHPI	GGTGA	3 cut(s)	505, 550, 614
BaeGI	GKGCMC	1 cut(s)	182
BbvI	GCAGC	1 cut(s)	17
BccI	CCATC	3 cut(s)	155, 200, 502
BciT130I	CCWGG	1 cut(s)	546
BcoDI	GTCTC	1 cut(s)	210
BfaI	CTAG	3 cut(s)	393, 612, 619
BisI	GCNGC	1 cut(s)	6
BlsI	GCNGC	1 cut(s)	7
Bme1390I	CCNGG	1 cut(s)	546
BmrFI	CCNGG	1 cut(s)	546
BmrI	ACTGGG	1 cut(s)	418
BmuI	ACTGGG	1 cut(s)	418
BplI	GAGNNNNNCTC	2 cut(s)	332, 364
BpuEI	CTTGAG	1 cut(s)	448
BsaAI	YACGTR	1 cut(s)	94
BsaJI	CCNNGG	1 cut(s)	387
BsaXI	ACNNNNNCTCC	2 cut(s)	237, 267
Bsc4I	CCNNNNNNNGG	2 cut(s)	393, 535
Bse1I	ACTGG	1 cut(s)	413
Bse3DI	GCAATG	1 cut(s)	255
BseBI	CCWGG	1 cut(s)	546
BseDI	CCNNGG	1 cut(s)	387
BseGI	GGATG	2 cut(s)	170, 211
BseLI	CCNNNNNNNGG	2 cut(s)	393, 535
BseMI	GCAATG	1 cut(s)	255
BseMII	CTCAG	2 cut(s)	74, 191
BseNI	ACTGG	1 cut(s)	413
BseRI	GAGGAG	1 cut(s)	97
BseSI	GKGCMC	1 cut(s)	182
BseXI	GCAGC	1 cut(s)	17
BshFI	GGCC	1 cut(s)	88
BslFI	GGGAC	1 cut(s)	425
BslI	CCNNNNNNNGG	2 cut(s)	393, 535
BsmAI	GTCTC	1 cut(s)	210
BsmBI	CGTCTC	1 cut(s)	210
BsmFI	GGGAC	1 cut(s)	425
BsnI	GGCC	1 cut(s)	88
Bsp1286I	GDGCHC	1 cut(s)	182
Bsp143I	GATC	5 cut(s)	308, 316, 420, 520, 553
BspACI	CCGC	1 cut(s)	74
BspANI	GGCC	1 cut(s)	88
BspCNI	CTCAG	2 cut(s)	73, 192
BspPI	GGATC	3 cut(s)	316, 528, 561
BsrDI	GCAATG	1 cut(s)	255
BsrI	ACTGG	1 cut(s)	413
BssECI	CCNNGG	1 cut(s)	387
BssMI	GATC	5 cut(s)	308, 316, 420, 520, 553
BssT1I	CCWWGG	1 cut(s)	387
Bst2UI	CCWGG	1 cut(s)	546
BstBAI	YACGTR	1 cut(s)	94
BstC8I	GCNNGC	2 cut(s)	72, 514
BstDEI	CTNAG	3 cut(s)	60, 200, 263
BstF5I	GGATG	2 cut(s)	170, 211
BstKTI	GATC	5 cut(s)	311, 319, 423, 523, 556
BstMAI	GTCTC	1 cut(s)	210
BstMBI	GATC	5 cut(s)	308, 316, 420, 520, 553
BstMWI	GCNNNNNNNGC	1 cut(s)	71
BstNI	CCWGG	1 cut(s)	546
BstSCI	CCNGG	1 cut(s)	544
BstSLI	GKGCMC	1 cut(s)	182
BstV1I	GCAGC	1 cut(s)	17
BstX2I	RGATCY	1 cut(s)	520
BstYI	RGATCY	1 cut(s)	520
BsuRI	GGCC	1 cut(s)	88
BtsCI	GGATG	2 cut(s)	170, 211
Cac8I	GCNNGC	2 cut(s)	72, 514
CseI	GACGC	1 cut(s)	227
CviAII	CATG	4 cut(s)	212, 368, 530, 550
CviJI	RGCY	6 cut(s)	28, 65, 88, 288, 343, 392
CviKI_1	RGCY	6 cut(s)	28, 65, 88, 288, 343, 392
DdeI	CTNAG	3 cut(s)	60, 200, 263
DpnI	GATC	5 cut(s)	310, 318, 422, 522, 555
DpnII	GATC	5 cut(s)	308, 316, 420, 520, 553
DraIII	CACNNNGTG	1 cut(s)	615
Eco130I	CCWWGG	1 cut(s)	387
EcoRI	GAATTC	1 cut(s)	171
EcoRII	CCWGG	1 cut(s)	544
EcoT14I	CCWWGG	1 cut(s)	387
ErhI	CCWWGG	1 cut(s)	387
Esp3I	CGTCTC	1 cut(s)	210
FaeI	CATG	4 cut(s)	215, 371, 533, 553
FaiI	YATR	8 cut(s)	213, 303, 369, 531, 551, 596, 598, 600
FaqI	GGGAC	1 cut(s)	425
FatI	CATG	4 cut(s)	211, 367, 529, 549
Fnu4HI	GCNGC	1 cut(s)	6
FokI	GGATG	2 cut(s)	177, 218
Fsp4HI	GCNGC	1 cut(s)	6
FspBI	CTAG	3 cut(s)	393, 612, 619
GluI	GCNGC	1 cut(s)	6
HaeIII	GGCC	1 cut(s)	88
HgaI	GACGC	1 cut(s)	227
Hin1II	CATG	4 cut(s)	215, 371, 533, 553
HincII	GTYRAC	1 cut(s)	460
HindII	GTYRAC	1 cut(s)	460
HinfI	GANTC	5 cut(s)	136, 196, 378, 461, 605
HphI	GGTGA	3 cut(s)	505, 550, 614
Hpy166II	GTNNAC	1 cut(s)	460
Hpy188I	TCNGA	4 cut(s)	135, 141, 201, 377
Hpy188III	TCNNGA	3 cut(s)	437, 465, 587
Hpy8I	GTNNAC	1 cut(s)	460
Hpy99I	CGWCG	1 cut(s)	240
HpyAV	CCTTC	4 cut(s)	136, 277, 299, 493
HpyCH4IV	ACGT	1 cut(s)	93
HpyCH4V	TGCA	1 cut(s)	371
HpyF10VI	GCNNNNNNNGC	1 cut(s)	71
HpyF3I	CTNAG	3 cut(s)	60, 200, 263
HpySE526I	ACGT	1 cut(s)	93
Hsp92II	CATG	4 cut(s)	215, 371, 533, 553
Kzo9I	GATC	5 cut(s)	308, 316, 420, 520, 553
LmnI	GCTCC	1 cut(s)	245
LpnPI	CCDG	9 cut(s)	47, 139, 161, 259, 364, 394, 450, 531, 558
Lsp1109I	GCAGC	1 cut(s)	17
MaeI	CTAG	3 cut(s)	393, 612, 619
MaeII	ACGT	1 cut(s)	93
MaeIII	GTNAC	2 cut(s)	118, 538
MalI	GATC	5 cut(s)	310, 318, 422, 522, 555
MboI	GATC	5 cut(s)	308, 316, 420, 520, 553
MboII	GAAGA	3 cut(s)	45, 48, 508
MflI	RGATCY	1 cut(s)	520
MhlI	GDGCHC	1 cut(s)	182
MluCI	AATT	1 cut(s)	171
MlyI	GAGTC	1 cut(s)	455
MnlI	CCTC	6 cut(s)	75, 78, 98, 195, 250, 461
MseI	TTAA	1 cut(s)	24
MspR9I	CCNGG	1 cut(s)	546
MvaI	CCWGG	1 cut(s)	546
MwoI	GCNNNNNNNGC	1 cut(s)	71
NdeII	GATC	5 cut(s)	308, 316, 420, 520, 553
NlaIII	CATG	4 cut(s)	215, 371, 533, 553
NmuCI	GTSAC	2 cut(s)	118, 538
PfeI	GAWTC	4 cut(s)	136, 196, 378, 605
PflMI	CCANNNNNTGG	1 cut(s)	535
PkrI	GCNGC	1 cut(s)	7
PleI	GAGTC	1 cut(s)	455
PpsI	GAGTC	1 cut(s)	455
Ppu21I	YACGTR	1 cut(s)	94
Psp6I	CCWGG	1 cut(s)	544
PspGI	CCWGG	1 cut(s)	544
PsuI	RGATCY	1 cut(s)	520
SaqAI	TTAA	1 cut(s)	24
SatI	GCNGC	1 cut(s)	6
Sau3AI	GATC	5 cut(s)	308, 316, 420, 520, 553
SchI	GAGTC	1 cut(s)	455
ScrFI	CCNGG	1 cut(s)	546
SduI	GDGCHC	1 cut(s)	182
SetI	ASST	4 cut(s)	96, 109, 147, 617
SmlI	CTYRAG	1 cut(s)	463
SmoI	CTYRAG	1 cut(s)	463
Sse9I	AATT	1 cut(s)	171
SsiI	CCGC	1 cut(s)	74
SspMI	CTAG	3 cut(s)	393, 612, 619
StyD4I	CCNGG	1 cut(s)	544
StyI	CCWWGG	1 cut(s)	387
TaiI	ACGT	1 cut(s)	96
TaqI	TCGA	1 cut(s)	238
TasI	AATT	1 cut(s)	171
TfiI	GAWTC	4 cut(s)	136, 196, 378, 605
Tru1I	TTAA	1 cut(s)	24
Tru9I	TTAA	1 cut(s)	24
TseFI	GTSAC	2 cut(s)	118, 538
TseI	GCWGC	1 cut(s)	5
Tsp45I	GTSAC	2 cut(s)	118, 538
TspDTI	ATGAA	1 cut(s)	318
Van91I	CCANNNNNTGG	1 cut(s)	535
XapI	RAATTY	1 cut(s)	171
XspI	CTAG	3 cut(s)	393, 612, 619

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.