Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0015445

Physical Location & Seq

Genomic Coordinates Forward (+)

19202409 .. 19204035

Gene Structure 1627 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G209400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 447 bp

ATGCTGATGATATATTTGCTGAAACCAAAACCACTAAACGACATGTCGTTTTTACAGATCAACGGTCCTGATTGCGCCAAAGCCACAAGATTGACTGAGAGAGAAGGCCCTCTCTCTTTCTCGCCTAACTCTGCTCTCTGCTTCGATCTGAACAGATCAAAGCCCAAGCTTTCAACAACAGCTTCCAATTCTCTCTCTACTTCACCTCCAACTGCCATGGCTCCGAAGCCAATTGCCAGTCCCGTGGCGGTCACGTGGTATCCGACCCTCGCCGTCGTGATGCTTGCCATCGGCCTCATCTTCACCGCTTCCTTCTTCATCTATGAAGCGACCATATCTAGGAAAAGCCGCAGTCTTGCTAAGGAGCTTATAACAGGAACAGTGGCCTCTGTCTTCTTGGGTTTCGGATCCTTGTTCTTACTGCTCGCATCGGGTGTTTATGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ost5

Protein Analysis

149

Amino Acids

15.9

Weight (kDa)

9.59

Isoelectric Point (pI)

31.79

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0015445)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G29735 AT4G29735
fragaria_vesca	FvH4_1g07510
malus_domestica	MD02G1079700.v1.1 MD15G1207400.v1.1
prunus_persica	Prupe.7G209400_v2.0.a1
pyrus_communis	pycom02g06350
rosa_chinensis	RchiOBHm_Chr2g0093401
rosa_multiflora	Rmu_sc0005227.1_g000016 Rmu_sc0032382.1_g000002
rosa_rugosa	Rorug02G0035100
rosa_samantha	Rh2AG081500 Rh2BG082800 Rh2CG084800 Rh2DG080500
rosa_wichuraiana	Rw2G006510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	371
AciI	CCGC	3 cut(s)	248, 306, 349
AclWI	GGATC	2 cut(s)	402, 415
AcvI	CACGTG	1 cut(s)	255
AfiI	CCNNNNNNNGG	1 cut(s)	339
AflIII	ACRYGT	1 cut(s)	42
AgsI	TTSAA	1 cut(s)	174
AluBI	AGCT	3 cut(s)	169, 182, 367
AluI	AGCT	3 cut(s)	169, 182, 367
AlwI	GGATC	2 cut(s)	402, 415
AoxI	GGCC	3 cut(s)	106, 292, 384
AspLEI	GCGC	1 cut(s)	77
AspS9I	GGNCC	2 cut(s)	65, 107
AsuHPI	GGTGA	2 cut(s)	195, 295
AvaII	GGWCC	1 cut(s)	65
BamHI	GGATCC	1 cut(s)	407
BbrPI	CACGTG	1 cut(s)	255
BbsI	GAAGAC	1 cut(s)	385
BccI	CCATC	1 cut(s)	296
BceAI	ACGGC	1 cut(s)	257
BciVI	GTATCC	1 cut(s)	270
BfaI	CTAG	1 cut(s)	339
BfuI	GTATCC	1 cut(s)	270
BisI	GCNGC	1 cut(s)	349
BlsI	GCNGC	1 cut(s)	350
Bme18I	GGWCC	1 cut(s)	65
BmgT120I	GGNCC	2 cut(s)	65, 107
BmiI	GGNNCC	2 cut(s)	222, 409
BmsI	GCATC	2 cut(s)	270, 437
BpiI	GAAGAC	1 cut(s)	385
Bpu10I	CCTNAGC	1 cut(s)	360
BsaAI	YACGTR	1 cut(s)	255
BsaJI	CCNNGG	2 cut(s)	216, 243
BsaXI	ACNNNNNCTCC	2 cut(s)	190, 220
Bsc4I	CCNNNNNNNGG	1 cut(s)	339
Bse1I	ACTGG	1 cut(s)	237
BseDI	CCNNGG	2 cut(s)	216, 243
BseLI	CCNNNNNNNGG	1 cut(s)	339
BseMII	CTCAG	1 cut(s)	87
BseNI	ACTGG	1 cut(s)	237
BshFI	GGCC	3 cut(s)	108, 294, 386
BslFI	GGGAC	1 cut(s)	225
BslI	CCNNNNNNNGG	1 cut(s)	339
BsmFI	GGGAC	1 cut(s)	225
BsnI	GGCC	3 cut(s)	108, 294, 386
Bsp143I	GATC	4 cut(s)	57, 145, 155, 407
Bsp19I	CCATGG	1 cut(s)	216
BspACI	CCGC	3 cut(s)	248, 306, 349
BspANI	GGCC	3 cut(s)	108, 294, 386
BspCNI	CTCAG	1 cut(s)	88
BspLI	GGNNCC	2 cut(s)	222, 409
BspPI	GGATC	2 cut(s)	402, 415
BsrI	ACTGG	1 cut(s)	237
BssECI	CCNNGG	2 cut(s)	216, 243
BssMI	GATC	4 cut(s)	57, 145, 155, 407
BssT1I	CCWWGG	1 cut(s)	216
Bst4CI	ACNGT	2 cut(s)	65, 382
BstBAI	YACGTR	1 cut(s)	255
BstC8I	GCNNGC	2 cut(s)	285, 426
BstDEI	CTNAG	2 cut(s)	96, 360
BstDSI	CCRYGG	2 cut(s)	216, 243
BstHHI	GCGC	1 cut(s)	77
BstKTI	GATC	4 cut(s)	60, 148, 158, 410
BstMBI	GATC	4 cut(s)	57, 145, 155, 407
BstNSI	RCATGY	1 cut(s)	46
BstV2I	GAAGAC	1 cut(s)	385
BstX2I	RGATCY	1 cut(s)	407
BstXI	CCANNNNNNTGG	1 cut(s)	244
BstYI	RGATCY	1 cut(s)	407
BsuI	GTATCC	1 cut(s)	270
BsuRI	GGCC	3 cut(s)	108, 294, 386
BtgI	CCRYGG	2 cut(s)	216, 243
BtsIMutI	CAGTG	1 cut(s)	387
Cac8I	GCNNGC	2 cut(s)	285, 426
CfoI	GCGC	1 cut(s)	77
Cfr13I	GGNCC	2 cut(s)	65, 107
CviAII	CATG	2 cut(s)	43, 217
DdeI	CTNAG	2 cut(s)	96, 360
DpnI	GATC	4 cut(s)	59, 147, 157, 409
DpnII	GATC	4 cut(s)	57, 145, 155, 407
Eco130I	CCWWGG	1 cut(s)	216
Eco47I	GGWCC	1 cut(s)	65
Eco72I	CACGTG	1 cut(s)	255
EcoO109I	RGGNCCY	1 cut(s)	107
EcoT14I	CCWWGG	1 cut(s)	216
ErhI	CCWWGG	1 cut(s)	216
FaeI	CATG	2 cut(s)	46, 220
FaiI	YATR	7 cut(s)	13, 44, 218, 324, 335, 371, 441
FaqI	GGGAC	1 cut(s)	225
FatI	CATG	2 cut(s)	42, 216
Fnu4HI	GCNGC	1 cut(s)	349
Fsp4HI	GCNGC	1 cut(s)	349
FspBI	CTAG	1 cut(s)	339
GlaI	GCGC	1 cut(s)	76
GluI	GCNGC	1 cut(s)	349
HaeIII	GGCC	3 cut(s)	108, 294, 386
HhaI	GCGC	1 cut(s)	77
Hin1II	CATG	2 cut(s)	46, 220
Hin6I	GCGC	1 cut(s)	75
HinP1I	GCGC	1 cut(s)	75
HindIII	AAGCTT	1 cut(s)	167
HphI	GGTGA	2 cut(s)	195, 295
Hpy188I	TCNGA	4 cut(s)	150, 225, 264, 407
Hpy188III	TCNNGA	2 cut(s)	68, 277
Hpy99I	CGWCG	1 cut(s)	278
HpyAV	CCTTC	2 cut(s)	98, 322
HpyCH4III	ACNGT	2 cut(s)	65, 382
HpyCH4IV	ACGT	1 cut(s)	254
HpyF3I	CTNAG	2 cut(s)	96, 360
HpySE526I	ACGT	1 cut(s)	254
Hsp92II	CATG	2 cut(s)	46, 220
HspAI	GCGC	1 cut(s)	75
Kzo9I	GATC	4 cut(s)	57, 145, 155, 407
LmnI	GCTCC	2 cut(s)	226, 364
LpnPI	CCDG	3 cut(s)	81, 250, 360
LweI	GCATC	2 cut(s)	270, 437
MaeI	CTAG	1 cut(s)	339
MaeII	ACGT	1 cut(s)	254
MaeIII	GTNAC	1 cut(s)	250
MalI	GATC	4 cut(s)	59, 147, 157, 409
MboI	GATC	4 cut(s)	57, 145, 155, 407
MboII	GAAGA	3 cut(s)	292, 307, 385
MfeI	CAATTG	1 cut(s)	231
MflI	RGATCY	1 cut(s)	407
MluCI	AATT	2 cut(s)	187, 231
MmeI	TCCRAC	2 cut(s)	233, 287
MnlI	CCTC	5 cut(s)	120, 216, 278, 305, 397
MunI	CAATTG	1 cut(s)	231
NcoI	CCATGG	1 cut(s)	216
NdeII	GATC	4 cut(s)	57, 145, 155, 407
NlaIII	CATG	2 cut(s)	46, 220
NlaIV	GGNNCC	2 cut(s)	222, 409
NmuCI	GTSAC	1 cut(s)	250
NspI	RCATGY	1 cut(s)	46
PciI	ACATGT	1 cut(s)	42
PcsI	WCGNNNNNNNCGW	1 cut(s)	260
PkrI	GCNGC	1 cut(s)	350
PmaCI	CACGTG	1 cut(s)	255
PmlI	CACGTG	1 cut(s)	255
Ppu21I	YACGTR	1 cut(s)	255
PscI	ACATGT	1 cut(s)	42
PsiI	TTATAA	1 cut(s)	371
PspCI	CACGTG	1 cut(s)	255
PspN4I	GGNNCC	2 cut(s)	222, 409
PspPI	GGNCC	2 cut(s)	65, 107
PsuI	RGATCY	1 cut(s)	407
SatI	GCNGC	1 cut(s)	349
Sau3AI	GATC	4 cut(s)	57, 145, 155, 407
Sau96I	GGNCC	2 cut(s)	65, 107
SetI	ASST	5 cut(s)	171, 184, 208, 257, 369
SfaNI	GCATC	2 cut(s)	270, 437
SinI	GGWCC	1 cut(s)	65
Sse9I	AATT	2 cut(s)	187, 231
SsiI	CCGC	3 cut(s)	248, 306, 349
SspMI	CTAG	1 cut(s)	339
StyI	CCWWGG	1 cut(s)	216
TaaI	ACNGT	2 cut(s)	65, 382
TaiI	ACGT	1 cut(s)	257
TaqI	TCGA	1 cut(s)	144
TasI	AATT	2 cut(s)	187, 231
TauI	GCSGC	1 cut(s)	351
TscAI	CASTG	1 cut(s)	387
TseFI	GTSAC	1 cut(s)	250
Tsp45I	GTSAC	1 cut(s)	250
TspDTI	ATGAA	2 cut(s)	307, 339
TspRI	CASTG	1 cut(s)	387
VpaK11BI	GGWCC	1 cut(s)	65
XceI	RCATGY	1 cut(s)	46
XspI	CTAG	1 cut(s)	339

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.