Prupe.7G209800_v2.0.a1

Polyamine oxidase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
19217602 .. 19220353
2752 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G209800.1

Sequence Viewer

Length: 1563 bp
ATGGTGGCCAAGAAATCAAGGATTGTGATAATAGGAGCAGGAATGGCTGGTGTGACAGCAGCTAACAAGCTCTTCACTGCCACTGGGTCCAAGGACTTGTTTGAGCTGTGTGTTGTGGAAGGTGGGTCAAGAATTGGTGGCAGAATCAACACATCAGAGTTTGGTGGTGACCGAATTGAGATGGGCGCCACTTGGATCCATGGCATTGGAGGCAGCCCAGTTCACAAAATTGCTCAAGAAATCCATGCACTTGAGTCTGAGCAGCCATGGGAGTGCATGGATGGGTCCTCTGATGAGCCCAAGACCATTGCTGAATGTGGGTTTGAGCTAACCCCCACTCTGGTAGACCCCATTTCATCTCTGTTCAAGAACTTGATGGATTATGCTCAGGGGAAGAAGGTGTTTGATGAAAGTACTGAAACAGAGAGCAATGGTGATGTTGAATACAGTAAGCTTGGAGATAAAGCTTCCGAGGTTTGTACAAGCAATGGTGGTCTTGGGAAGCTCAGTGTTGGTTCTTTCCTAAGGCAGGGCCTTGATGCTTATTGGGTTTCAAAGAAAAACCAAGATGAGGAGCTGAAGCTCAATGGTTATGGAAATTGGAGCAGAAGGTTGCTGGAAGAAGCCATCTTTGCAATGCATGAGAACACCCAAAGGACTTATACATCAGCTGGTGACTTGTTTACTCTGGATTATAGTGCAGAAAGCGAGTACCGTATGTTCCCAGGCGAAGAAATTACCATTGCTAAAGGCTACTTGAGCATAGTTCAATCACTAGCCTCTGTTCTGCCACCTGGGTTGATCCAGTTAGGCAGAAAGGTCACAAAAATTGAATGGCAGCAGCCAGAGACTCATATCAACAATGGTTATGATGACACAAGGCCTGTGAAGCTACACTTTTCTGATGGGTCAGTTATGTTGGCCGATCATGTTATTGTTACAGTTTCTTTGGGGGTCCTTAAAGCTTCAATTCAACAAGATTCAGGTATGTTCAATCCTCCCTTGCCTTCTTTCAAGACTGAGGCAATATCAAGGCTTGGTTTTGGTGTTGTTAACAAGCTGTTTCTGCAACTGAGCTCTACCCATGCTACAAAAGGCCAAGACTTCAGGAAAGAAGCACTTGAGCTTGAATCACTCAAAGATGAAGAGATCATTAATGGGGTTTCAGCAACAGTCTCTAGCTTTCTGTCAAAACCCCAAAAGAAAGAGAGAGAAAATTGTCATTCCCATGAACTATGCAATGGGAATGTGAATTCACAAGAGAACTCTGAAGTAAAAATTGCAAAGGTTTTGAAGAGTCAATGGGGTAATGATCCTCTGTTTCTAGGATCCTACTCTTATGTTGCTGTTGGATCAAGTGGTGAGGATTTGGACACCATGGCAGAGCCATTGCCAAAGTTGAACAGTTGTGGTGATGAGCCTGCTACTTCCCCCCCACTTCAAATTCTGTTTGCAGGGGAAGCTACACACAGAACCCACTATTCTACCACCCATGGAGCTTACTTTAGTGGTCTTAGAGAAGCCAATAGGCTTCTCCAACATTATCACCATGTTGGGGTTTAG

Protein Analysis

521

Amino Acids

56.82

Weight (kDa)

5.4

Isoelectric Point (pI)

39.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0012410)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 185
AccI GTMKAC 1 cut(s) 345
AclWI GGATC 7 cut(s) 190, 203, 796, 1307, 1323, 1336, 1360
AcoI YGGCCR 2 cut(s) 6, 921
AcsI RAATTY 2 cut(s) 1252, 1443
AcuI CTGAAG 3 cut(s) 599, 1090, 1290
AcyI GRCGYC 1 cut(s) 186
AfaI GTAC 3 cut(s) 415, 481, 713
AfiI CCNNNNNNNGG 4 cut(s) 340, 529, 571, 1555
AjnI CCWGG 2 cut(s) 724, 793
Alw21I GWGCWC 1 cut(s) 1079
Alw26I GTCTC 2 cut(s) 842, 1180
AlwI GGATC 7 cut(s) 190, 203, 796, 1307, 1323, 1336, 1360
AoxI GGCC 5 cut(s) 6, 532, 881, 921, 1096
ApeKI GCWGC 5 cut(s) 59, 213, 262, 838, 841
ApoI RAATTY 2 cut(s) 1252, 1443
AseI ATTAAT 1 cut(s) 1155
AspLEI GCGC 1 cut(s) 188
AspS9I GGNCC 4 cut(s) 87, 285, 532, 955
AsuHPI GGTGA 6 cut(s) 179, 446, 686, 1373, 1424, 1538
AvaII GGWCC 3 cut(s) 87, 285, 955
AxyI CCTNAGG 1 cut(s) 524
BalI TGGCCA 1 cut(s) 8
BamHI GGATCC 2 cut(s) 195, 1328
BanI GGYRCC 1 cut(s) 185
BanII GRGCYC 2 cut(s) 300, 1079
Bbv12I GWGCWC 1 cut(s) 1079
BbvI GCAGC 5 cut(s) 71, 225, 274, 850, 853
BccI CCATC 5 cut(s) 175, 275, 370, 635, 899
BciT130I CCWGG 2 cut(s) 726, 795
BcoDI GTCTC 2 cut(s) 842, 1180
BfaI CTAG 3 cut(s) 776, 1179, 1325
BfoI RGCGCY 1 cut(s) 189
BisI GCNGC 5 cut(s) 60, 214, 263, 839, 842
BlsI GCNGC 5 cut(s) 61, 215, 264, 840, 843
BmcAI AGTACT 1 cut(s) 415
Bme1390I CCNGG 2 cut(s) 726, 795
Bme18I GGWCC 3 cut(s) 87, 285, 955
BmgT120I GGNCC 4 cut(s) 87, 285, 532, 955
BmiI GGNNCC 6 cut(s) 88, 187, 197, 286, 956, 1330
BmrFI CCNGG 2 cut(s) 726, 795
BmrI ACTGGG 2 cut(s) 93, 212
BmsI GCATC 1 cut(s) 529
BmuI ACTGGG 2 cut(s) 93, 212
Bpu10I CCTNAGC 1 cut(s) 387
BpuEI CTTGAG 4 cut(s) 219, 272, 778, 1142
BsaHI GRCGYC 1 cut(s) 186
BsaJI CCNNGG 8 cut(s) 90, 199, 266, 471, 724, 794, 1377, 1492
Bsc4I CCNNNNNNNGG 4 cut(s) 340, 529, 571, 1555
Bse1I ACTGG 3 cut(s) 88, 218, 805
Bse21I CCTNAGG 1 cut(s) 524
Bse3DI GCAATG 7 cut(s) 306, 436, 493, 642, 741, 1246, 1388
BseBI CCWGG 2 cut(s) 726, 795
BseDI CCNNGG 8 cut(s) 90, 199, 266, 471, 724, 794, 1377, 1492
BseGI GGATG 1 cut(s) 286
BseLI CCNNNNNNNGG 4 cut(s) 340, 529, 571, 1555
BseMI GCAATG 7 cut(s) 306, 436, 493, 642, 741, 1246, 1388
BseMII CTCAG 5 cut(s) 249, 401, 520, 1011, 1064
BseNI ACTGG 3 cut(s) 88, 218, 805
BseRI GAGGAG 1 cut(s) 587
BseXI GCAGC 5 cut(s) 71, 225, 274, 850, 853
BsgI GTGCAG 1 cut(s) 720
BshFI GGCC 5 cut(s) 8, 534, 883, 923, 1098
BshNI GGYRCC 1 cut(s) 185
BsiHKAI GWGCWC 1 cut(s) 1079
BslI CCNNNNNNNGG 4 cut(s) 340, 529, 571, 1555
BsmAI GTCTC 2 cut(s) 842, 1180
BsnI GGCC 5 cut(s) 8, 534, 883, 923, 1098
Bsp1286I GDGCHC 2 cut(s) 300, 1079
Bsp1407I TGTACA 1 cut(s) 479
Bsp143I GATC 7 cut(s) 195, 801, 925, 1149, 1312, 1328, 1352
Bsp19I CCATGG 4 cut(s) 199, 266, 1377, 1492
BspANI GGCC 5 cut(s) 8, 534, 883, 923, 1098
BspCNI CTCAG 5 cut(s) 250, 400, 519, 1012, 1065
BspLI GGNNCC 6 cut(s) 88, 187, 197, 286, 956, 1330
BspPI GGATC 7 cut(s) 190, 203, 796, 1307, 1323, 1336, 1360
BspQI GCTCTTC 1 cut(s) 77
BspT107I GGYRCC 1 cut(s) 185
BsrDI GCAATG 7 cut(s) 306, 436, 493, 642, 741, 1246, 1388
BsrGI TGTACA 1 cut(s) 479
BsrI ACTGG 3 cut(s) 88, 218, 805
BssECI CCNNGG 8 cut(s) 90, 199, 266, 471, 724, 794, 1377, 1492
BssMI GATC 7 cut(s) 195, 801, 925, 1149, 1312, 1328, 1352
BssNI GRCGYC 1 cut(s) 186
BssT1I CCWWGG 5 cut(s) 90, 199, 266, 1377, 1492
Bst2UI CCWGG 2 cut(s) 726, 795
Bst4CI ACNGT 5 cut(s) 449, 716, 943, 1174, 1406
Bst6I CTCTTC 3 cut(s) 77, 1140, 1289
BstACI GRCGYC 1 cut(s) 186
BstAUI TGTACA 1 cut(s) 479
BstC8I GCNNGC 1 cut(s) 1422
BstDEI CTNAG 7 cut(s) 258, 387, 506, 524, 1020, 1073, 1514
BstDSI CCRYGG 4 cut(s) 199, 266, 1377, 1492
BstEII GGTNACC 1 cut(s) 167
BstENI CCTNNNNNAGG 1 cut(s) 527
BstF5I GGATG 1 cut(s) 286
BstH2I RGCGCY 1 cut(s) 189
BstHHI GCGC 1 cut(s) 188
BstKTI GATC 7 cut(s) 198, 804, 928, 1152, 1315, 1331, 1355
BstMAI GTCTC 2 cut(s) 842, 1180
BstMBI GATC 7 cut(s) 195, 801, 925, 1149, 1312, 1328, 1352
BstMWI GCNNNNNNNGC 7 cut(s) 44, 210, 632, 759, 889, 1066, 1460
BstNI CCWGG 2 cut(s) 726, 795
BstPI GGTNACC 1 cut(s) 167
BstSCI CCNGG 2 cut(s) 724, 793
BstV1I GCAGC 5 cut(s) 71, 225, 274, 850, 853
BstX2I RGATCY 2 cut(s) 195, 1328
BstXI CCANNNNNNTGG 1 cut(s) 206
BstYI RGATCY 2 cut(s) 195, 1328
Bsu36I CCTNAGG 1 cut(s) 524
BsuRI GGCC 5 cut(s) 8, 534, 883, 923, 1098
BtgI CCRYGG 4 cut(s) 199, 266, 1377, 1492
BtsCI GGATG 1 cut(s) 286
BtsI GCAGTG 1 cut(s) 75
BtsIMutI CAGTG 3 cut(s) 75, 81, 514
Cac8I GCNNGC 1 cut(s) 1422
CfoI GCGC 1 cut(s) 188
Cfr13I GGNCC 4 cut(s) 87, 285, 532, 955
Csp6I GTAC 3 cut(s) 414, 480, 712
CspCI CAANNNNNGTGG 2 cut(s) 780, 815
CviQI GTAC 3 cut(s) 414, 480, 712
DdeI CTNAG 7 cut(s) 258, 387, 506, 524, 1020, 1073, 1514
DinI GGCGCC 1 cut(s) 187
DpnI GATC 7 cut(s) 197, 803, 927, 1151, 1314, 1330, 1354
DpnII GATC 7 cut(s) 195, 801, 925, 1149, 1312, 1328, 1352
EaeI YGGCCR 2 cut(s) 6, 921
Eam1104I CTCTTC 3 cut(s) 77, 1140, 1289
EarI CTCTTC 3 cut(s) 77, 1140, 1289
Ecl136II GAGCTC 1 cut(s) 1077
Eco130I CCWWGG 5 cut(s) 90, 199, 266, 1377, 1492
Eco147I AGGCCT 1 cut(s) 883
Eco24I GRGCYC 2 cut(s) 300, 1079
Eco47I GGWCC 3 cut(s) 87, 285, 955
Eco53kI GAGCTC 1 cut(s) 1077
Eco57I CTGAAG 3 cut(s) 599, 1090, 1290
Eco81I CCTNAGG 1 cut(s) 524
Eco91I GGTNACC 1 cut(s) 167
EcoICRI GAGCTC 1 cut(s) 1077
EcoNI CCTNNNNNAGG 1 cut(s) 527
EcoO109I RGGNCCY 3 cut(s) 285, 532, 955
EcoO65I GGTNACC 1 cut(s) 167
EcoRI GAATTC 1 cut(s) 1252
EcoRII CCWGG 2 cut(s) 724, 793
EcoT14I CCWWGG 5 cut(s) 90, 199, 266, 1377, 1492
EcoT22I ATGCAT 1 cut(s) 642
EcoT38I GRGCYC 2 cut(s) 300, 1079
EgeI GGCGCC 1 cut(s) 187
EheI GGCGCC 1 cut(s) 187
ErhI CCWWGG 5 cut(s) 90, 199, 266, 1377, 1492
FalI AAGNNNNNCTT 4 cut(s) 881, 913, 1104, 1136
FblI GTMKAC 1 cut(s) 345
Fnu4HI GCNGC 5 cut(s) 60, 214, 263, 839, 842
FokI GGATG 1 cut(s) 293
FriOI GRGCYC 2 cut(s) 300, 1079
Fsp4HI GCNGC 5 cut(s) 60, 214, 263, 839, 842
FspBI CTAG 3 cut(s) 776, 1179, 1325
GlaI GCGC 1 cut(s) 187
GluI GCNGC 5 cut(s) 60, 214, 263, 839, 842
HaeII RGCGCY 1 cut(s) 189
HaeIII GGCC 5 cut(s) 8, 534, 883, 923, 1098
HhaI GCGC 1 cut(s) 188
Hin1I GRCGYC 1 cut(s) 186
Hin6I GCGC 1 cut(s) 186
HinP1I GCGC 1 cut(s) 186
HincII GTYRAC 1 cut(s) 1054
HindII GTYRAC 1 cut(s) 1054
HindIII AAGCTT 3 cut(s) 452, 465, 963
HinfI GANTC 6 cut(s) 144, 254, 850, 980, 1130, 1297
HpaI GTTAAC 1 cut(s) 1054
HphI GGTGA 6 cut(s) 179, 446, 686, 1373, 1424, 1538
Hpy166II GTNNAC 4 cut(s) 223, 346, 684, 1054
Hpy188I TCNGA 6 cut(s) 157, 259, 292, 472, 904, 1270
Hpy188III TCNNGA 6 cut(s) 129, 236, 367, 689, 1015, 1108
Hpy8I GTNNAC 4 cut(s) 223, 346, 684, 1054
HpyAV CCTTC 4 cut(s) 113, 391, 603, 1017
HpyCH4III ACNGT 5 cut(s) 449, 716, 943, 1174, 1406
HpyCH4V TGCA 9 cut(s) 248, 276, 635, 640, 701, 1069, 1239, 1283, 1454
HpyF10VI GCNNNNNNNGC 7 cut(s) 44, 210, 632, 759, 889, 1066, 1460
HpyF3I CTNAG 7 cut(s) 258, 387, 506, 524, 1020, 1073, 1514
Hsp92I GRCGYC 1 cut(s) 186
HspAI GCGC 1 cut(s) 186
KasI GGCGCC 1 cut(s) 185
KspAI GTTAAC 1 cut(s) 1054
Kzo9I GATC 7 cut(s) 195, 801, 925, 1149, 1312, 1328, 1352
LguI GCTCTTC 1 cut(s) 77
LmnI GCTCC 4 cut(s) 35, 574, 603, 1496
Lsp1109I GCAGC 5 cut(s) 71, 225, 274, 850, 853
LweI GCATC 1 cut(s) 529
MaeI CTAG 3 cut(s) 776, 1179, 1325
MaeIII GTNAC 5 cut(s) 52, 167, 674, 820, 937
MalI GATC 7 cut(s) 197, 803, 927, 1151, 1314, 1330, 1354
MboI GATC 7 cut(s) 195, 801, 925, 1149, 1312, 1328, 1352
MboII GAAGA 6 cut(s) 64, 406, 632, 743, 1157, 1306
MflI RGATCY 2 cut(s) 195, 1328
MhlI GDGCHC 2 cut(s) 300, 1079
MlsI TGGCCA 1 cut(s) 8
MluNI TGGCCA 1 cut(s) 8
Mly113I GGCGCC 1 cut(s) 186
MlyI GAGTC 3 cut(s) 263, 844, 1306
MmeI TCCRAC 2 cut(s) 1330, 1561
MnlI CCTC 9 cut(s) 203, 298, 466, 565, 790, 1008, 1015, 1326, 1357
Mox20I TGGCCA 1 cut(s) 8
Mph1103I ATGCAT 1 cut(s) 642
MscI TGGCCA 1 cut(s) 8
MseI TTAA 3 cut(s) 960, 1053, 1155
MslI CAYNNNNRTG 2 cut(s) 271, 1227
Msp20I TGGCCA 1 cut(s) 8
MspA1I CMGCKG 1 cut(s) 671
MspR9I CCNGG 2 cut(s) 726, 795
MvaI CCWGG 2 cut(s) 726, 795
MwoI GCNNNNNNNGC 7 cut(s) 44, 210, 632, 759, 889, 1066, 1460
NarI GGCGCC 1 cut(s) 186
NcoI CCATGG 4 cut(s) 199, 266, 1377, 1492
NdeII GATC 7 cut(s) 195, 801, 925, 1149, 1312, 1328, 1352
NlaIV GGNNCC 6 cut(s) 88, 187, 197, 286, 956, 1330
NmuCI GTSAC 4 cut(s) 52, 167, 674, 820
NsiI ATGCAT 1 cut(s) 642
PceI AGGCCT 1 cut(s) 883
PciSI GCTCTTC 1 cut(s) 77
PfeI GAWTC 3 cut(s) 144, 980, 1130
PkrI GCNGC 5 cut(s) 61, 215, 264, 840, 843
PleI GAGTC 3 cut(s) 262, 844, 1305
PluTI GGCGCC 1 cut(s) 189
PpsI GAGTC 3 cut(s) 262, 844, 1305
PpuMI RGGWCCY 2 cut(s) 285, 955
PshBI ATTAAT 1 cut(s) 1155
Psp124BI GAGCTC 1 cut(s) 1079
Psp5II RGGWCCY 2 cut(s) 285, 955
Psp6I CCWGG 2 cut(s) 724, 793
PspEI GGTNACC 1 cut(s) 167
PspGI CCWGG 2 cut(s) 724, 793
PspN4I GGNNCC 6 cut(s) 88, 187, 197, 286, 956, 1330
PspPI GGNCC 4 cut(s) 87, 285, 532, 955
PspPPI RGGWCCY 2 cut(s) 285, 955
PsrI GAACNNNNNNTAC 2 cut(s) 704, 736
PsuI RGATCY 2 cut(s) 195, 1328
PvuII CAGCTG 1 cut(s) 671
RsaI GTAC 3 cut(s) 415, 481, 713
RsaNI GTAC 3 cut(s) 414, 480, 712
RseI CAYNNNNRTG 2 cut(s) 271, 1227
SacI GAGCTC 1 cut(s) 1079
SapI GCTCTTC 1 cut(s) 77
SaqAI TTAA 3 cut(s) 960, 1053, 1155
SatI GCNGC 5 cut(s) 60, 214, 263, 839, 842
Sau3AI GATC 7 cut(s) 195, 801, 925, 1149, 1312, 1328, 1352
Sau96I GGNCC 4 cut(s) 87, 285, 532, 955
ScaI AGTACT 1 cut(s) 415
SchI GAGTC 3 cut(s) 263, 844, 1306
ScrFI CCNGG 2 cut(s) 726, 795
SduI GDGCHC 2 cut(s) 300, 1079
SfaNI GCATC 1 cut(s) 529
SfoI GGCGCC 1 cut(s) 187
SinI GGWCC 3 cut(s) 87, 285, 955
SmiMI CAYNNNNRTG 2 cut(s) 271, 1227
SmlI CTYRAG 4 cut(s) 234, 251, 757, 1121
SmoI CTYRAG 4 cut(s) 234, 251, 757, 1121
SseBI AGGCCT 1 cut(s) 883
SspDI GGCGCC 1 cut(s) 185
SspMI CTAG 3 cut(s) 776, 1179, 1325
SstI GAGCTC 1 cut(s) 1079
StuI AGGCCT 1 cut(s) 883
StyD4I CCNGG 2 cut(s) 724, 793
StyI CCWWGG 5 cut(s) 90, 199, 266, 1377, 1492
TaaI ACNGT 5 cut(s) 449, 716, 943, 1174, 1406
TaqII GACCGA 1 cut(s) 186
TatI WGTACW 2 cut(s) 413, 479
TfiI GAWTC 3 cut(s) 144, 980, 1130
Tru1I TTAA 3 cut(s) 960, 1053, 1155
Tru9I TTAA 3 cut(s) 960, 1053, 1155
TscAI CASTG 3 cut(s) 82, 88, 514
TseFI GTSAC 4 cut(s) 52, 167, 674, 820
TseI GCWGC 5 cut(s) 59, 213, 262, 838, 841
Tsp45I GTSAC 4 cut(s) 52, 167, 674, 820
TspDTI ATGAA 4 cut(s) 345, 423, 1158, 1245
TspRI CASTG 3 cut(s) 82, 88, 514
VpaK11BI GGWCC 3 cut(s) 87, 285, 955
VspI ATTAAT 1 cut(s) 1155
XagI CCTNNNNNAGG 1 cut(s) 527
XapI RAATTY 2 cut(s) 1252, 1443
XmiI GTMKAC 1 cut(s) 345
XspI CTAG 3 cut(s) 776, 1179, 1325
ZrmI AGTACT 1 cut(s) 415
Zsp2I ATGCAT 1 cut(s) 642
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.