Prupe.7G225000_v2.0.a1

Catalyzes xyloglucan endohydrolysis (XEH) and or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
19971735 .. 19973627
1893 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G225000.1

Sequence Viewer

Length: 873 bp
ATGGCAGTTTTGCAAGCTTTTCTGATTGCTCTATGCATCATTGTGTCTCATCAAAATTTGGTTGATGCAAAATTTTCCAAGAGTATGTATATCACCTGGGGTACCCAGCATGCTACAATTCAAGGCAATGGTGGCGAGGATCTTAACCTCGTGCTGGATCCATTTTCAGGTTCTGCTGTTCAATCAAAGAGAGGCTTCTTATTCGGAAGCATTGAGATGCTCATTAAGTTGGTACCTGGGAATTCCGCAGGGACGGTAACAGCCTACTATCTATCCTCGACAGGAACCAAACATGATGAGATAGATTTTGAATTCTTAGGGAACATTTCTGGACAACCTTACATTGTCCACACAAACGTCTATACACAAGGAAATGGAAGCAAAGAGCAGCAATTTTATCTCTGGTTTGACCCTACTGCTGATTTCCACAACTACACCATACATTGGAACCCCACTGAAATTGTGTGGTATGTTGATAGTCTACCAATTCGTGTTTTCCGAAACTATGAAAACCAGGGGATTGCTTACCCCAACAAGCAAGGGATGAGGGTTTACTCAAGCTTATGGAATGCTGATAACTGGGCAACTAGAGGCGGGCTAGTCAAGATAGATTGGACCAGTGCACCCTTCACGGCTAGATTTCGAAACTTCAGGGCAAGAGCCTGCAAGTGGAACGGAGACATCAGCATTAGTCAATGTGGCACCACTTCCCCGGCAAACTGGTGGACCTCCCCTATATACAGCCAGCTGAGCAGTGCTAAGCGGGGCCAGCTGCAGTGGGTCAGAGATAGCTTCATGATCTATGACTACTGCAAAGATACTAAAAGGTTCAATGGACAGATACCTGCTGAATGTTTTATACAACAATTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

291

Amino Acids

33.0

Weight (kDa)

8.2

Isoelectric Point (pI)

33.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016167)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G28850
fragaria_vesca FvH4_7g07550
malus_domestica MD02G1057800.v1.1 MD15G1192200.v1.1
prunus_persica Prupe.7G225000_v2.0.a1
pyrus_communis pycom02g04690 pycom15g17210
rosa_chinensis RchiOBHm_Chr2g0091321
rosa_laevigata RLG00000016211
rosa_multiflora Rmu_sc0002270.1_g000048
rosa_roxburghii Rroxscaffold_2G00150210
rosa_rugosa Rorug02G0016300
rosa_samantha Rh2CG062600 Rh2DG061200
rosa_wichuraiana Rw2G004840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 853
Acc65I GGTACC 2 cut(s) 101, 232
AccB1I GGYRCC 3 cut(s) 101, 232, 701
AccB7I CCANNNNNTGG 1 cut(s) 444
AccI GTMKAC 1 cut(s) 481
AciI CCGC 3 cut(s) 246, 594, 763
AclWI GGATC 3 cut(s) 147, 152, 165
AcsI RAATTY 4 cut(s) 55, 71, 241, 311
AcuI CTGAAG 1 cut(s) 634
AfaI GTAC 2 cut(s) 103, 234
AfiI CCNNNNNNNGG 4 cut(s) 154, 167, 444, 669
AgsI TTSAA 4 cut(s) 122, 182, 311, 832
AjnI CCWGG 3 cut(s) 95, 235, 513
AluBI AGCT 5 cut(s) 17, 561, 748, 772, 792
AluI AGCT 5 cut(s) 17, 561, 748, 772, 792
Alw21I GWGCWC 1 cut(s) 625
Alw26I GTCTC 2 cut(s) 51, 672
Alw44I GTGCAC 1 cut(s) 621
AlwI GGATC 3 cut(s) 147, 152, 165
AlwNI CAGNNNCTG 1 cut(s) 173
AoxI GGCC 1 cut(s) 766
ApaLI GTGCAC 1 cut(s) 621
ApeKI GCWGC 2 cut(s) 388, 772
ApoI RAATTY 4 cut(s) 55, 71, 241, 311
Asp718I GGTACC 2 cut(s) 101, 232
AspS9I GGNCC 3 cut(s) 615, 726, 766
AsuC2I CCSGG 1 cut(s) 713
AsuHPI GGTGA 1 cut(s) 85
AsuII TTCGAA 1 cut(s) 643
AvaII GGWCC 2 cut(s) 615, 726
BaeGI GKGCMC 1 cut(s) 625
BamHI GGATCC 1 cut(s) 157
BanI GGYRCC 3 cut(s) 101, 232, 701
BauI CACGAG 1 cut(s) 149
Bbv12I GWGCWC 1 cut(s) 625
BbvI GCAGC 2 cut(s) 400, 759
BceAI ACGGC 1 cut(s) 648
BciT130I CCWGG 3 cut(s) 97, 237, 515
BcnI CCSGG 1 cut(s) 713
BcoDI GTCTC 2 cut(s) 51, 672
BfaI CTAG 3 cut(s) 588, 599, 636
BfmI CTRYAG 1 cut(s) 773
BfuAI ACCTGC 1 cut(s) 853
BisI GCNGC 2 cut(s) 389, 773
BlpI GCTNAGC 2 cut(s) 749, 759
BlsI GCNGC 2 cut(s) 390, 774
Bme1390I CCNGG 4 cut(s) 97, 237, 515, 713
Bme18I GGWCC 2 cut(s) 615, 726
BmgT120I GGNCC 3 cut(s) 615, 726, 766
BmiI GGNNCC 7 cut(s) 103, 159, 234, 286, 449, 703, 767
BmrFI CCNGG 4 cut(s) 97, 237, 515, 713
BmrI ACTGGG 1 cut(s) 589
BmsI GCATC 3 cut(s) 45, 55, 207
BmuI ACTGGG 1 cut(s) 589
Bpu1102I GCTNAGC 2 cut(s) 749, 759
Bpu14I TTCGAA 1 cut(s) 643
BpuEI CTTGAG 1 cut(s) 541
BpuMI CCSGG 1 cut(s) 713
BsaJI CCNNGG 4 cut(s) 96, 236, 514, 711
Bsc4I CCNNNNNNNGG 4 cut(s) 154, 167, 444, 669
Bse1I ACTGG 3 cut(s) 584, 618, 725
Bse3DI GCAATG 1 cut(s) 133
BseBI CCWGG 3 cut(s) 97, 237, 515
BseDI CCNNGG 4 cut(s) 96, 236, 514, 711
BseGI GGATG 1 cut(s) 549
BseLI CCNNNNNNNGG 4 cut(s) 154, 167, 444, 669
BseMI GCAATG 1 cut(s) 133
BseMII CTCAG 1 cut(s) 740
BseNI ACTGG 3 cut(s) 584, 618, 725
BseSI GKGCMC 1 cut(s) 625
BseXI GCAGC 2 cut(s) 400, 759
BseYI CCCAGC 1 cut(s) 105
BshFI GGCC 1 cut(s) 768
BshNI GGYRCC 3 cut(s) 101, 232, 701
BsiHKAI GWGCWC 1 cut(s) 625
BsiSI CCGG 1 cut(s) 713
BslFI GGGAC 1 cut(s) 265
BslI CCNNNNNNNGG 4 cut(s) 154, 167, 444, 669
BsmAI GTCTC 2 cut(s) 51, 672
BsmFI GGGAC 1 cut(s) 265
BsmI GAATGC 1 cut(s) 574
BsnI GGCC 1 cut(s) 768
Bsp119I TTCGAA 1 cut(s) 643
Bsp1286I GDGCHC 1 cut(s) 625
Bsp143I GATC 3 cut(s) 139, 157, 798
Bsp1720I GCTNAGC 2 cut(s) 749, 759
BspACI CCGC 3 cut(s) 246, 594, 763
BspANI GGCC 1 cut(s) 768
BspCNI CTCAG 1 cut(s) 741
BspHI TCATGA 1 cut(s) 795
BspLI GGNNCC 7 cut(s) 103, 159, 234, 286, 449, 703, 767
BspMAI CTGCAG 1 cut(s) 777
BspMI ACCTGC 1 cut(s) 853
BspPI GGATC 3 cut(s) 147, 152, 165
BspT104I TTCGAA 1 cut(s) 643
BspT107I GGYRCC 3 cut(s) 101, 232, 701
BsrDI GCAATG 1 cut(s) 133
BsrI ACTGG 3 cut(s) 584, 618, 725
BssECI CCNNGG 4 cut(s) 96, 236, 514, 711
BssMI GATC 3 cut(s) 139, 157, 798
BssSI CACGAG 1 cut(s) 149
Bst2BI CACGAG 1 cut(s) 149
Bst2UI CCWGG 3 cut(s) 97, 237, 515
Bst4CI ACNGT 1 cut(s) 256
BstBI TTCGAA 1 cut(s) 643
BstC8I GCNNGC 6 cut(s) 15, 111, 596, 664, 746, 770
BstDEI CTNAG 3 cut(s) 316, 749, 759
BstF5I GGATG 1 cut(s) 549
BstKTI GATC 3 cut(s) 142, 160, 801
BstMAI GTCTC 2 cut(s) 51, 672
BstMBI GATC 3 cut(s) 139, 157, 798
BstMWI GCNNNNNNNGC 3 cut(s) 132, 750, 769
BstNI CCWGG 3 cut(s) 97, 237, 515
BstNSI RCATGY 1 cut(s) 113
BstSCI CCNGG 4 cut(s) 95, 235, 513, 711
BstSFI CTRYAG 1 cut(s) 773
BstSLI GKGCMC 1 cut(s) 625
BstV1I GCAGC 2 cut(s) 400, 759
BstX2I RGATCY 2 cut(s) 139, 157
BstYI RGATCY 2 cut(s) 139, 157
BsuRI GGCC 1 cut(s) 768
BtsCI GGATG 1 cut(s) 549
BtsI GCAGTG 2 cut(s) 760, 782
BtsIMutI CAGTG 4 cut(s) 453, 625, 760, 782
BveI ACCTGC 1 cut(s) 853
Cac8I GCNNGC 6 cut(s) 15, 111, 596, 664, 746, 770
CaiI CAGNNNCTG 1 cut(s) 173
CciI TCATGA 1 cut(s) 795
Cfr13I GGNCC 3 cut(s) 615, 726, 766
Csp6I GTAC 2 cut(s) 102, 233
CspCI CAANNNNNGTGG 2 cut(s) 442, 477
CviAII CATG 3 cut(s) 110, 293, 796
CviQI GTAC 2 cut(s) 102, 233
DdeI CTNAG 3 cut(s) 316, 749, 759
DpnI GATC 3 cut(s) 141, 159, 800
DpnII GATC 3 cut(s) 139, 157, 798
Eco47I GGWCC 2 cut(s) 615, 726
Eco57I CTGAAG 1 cut(s) 634
EcoRI GAATTC 2 cut(s) 241, 311
EcoRII CCWGG 3 cut(s) 95, 235, 513
EcoT22I ATGCAT 1 cut(s) 38
FaeI CATG 3 cut(s) 113, 296, 799
FalI AAGNNNNNCTT 2 cut(s) 179, 211
FaqI GGGAC 1 cut(s) 265
FatI CATG 3 cut(s) 109, 292, 795
FauI CCCGC 2 cut(s) 587, 756
FblI GTMKAC 1 cut(s) 481
Fnu4HI GCNGC 2 cut(s) 389, 773
FokI GGATG 1 cut(s) 556
Fsp4HI GCNGC 2 cut(s) 389, 773
FspBI CTAG 3 cut(s) 588, 599, 636
GluI GCNGC 2 cut(s) 389, 773
GsaI CCCAGC 1 cut(s) 109
HaeIII GGCC 1 cut(s) 768
HapII CCGG 1 cut(s) 713
Hin1II CATG 3 cut(s) 113, 296, 799
HindIII AAGCTT 2 cut(s) 15, 559
HpaII CCGG 1 cut(s) 713
HphI GGTGA 1 cut(s) 85
Hpy166II GTNNAC 5 cut(s) 349, 482, 553, 623, 726
Hpy188I TCNGA 5 cut(s) 24, 206, 500, 785, 872
Hpy188III TCNNGA 3 cut(s) 330, 604, 796
Hpy8I GTNNAC 5 cut(s) 349, 482, 553, 623, 726
HpyAV CCTTC 1 cut(s) 637
HpyCH4III ACNGT 1 cut(s) 256
HpyCH4IV ACGT 1 cut(s) 357
HpyCH4V TGCA 7 cut(s) 13, 36, 68, 623, 666, 775, 813
HpyF10VI GCNNNNNNNGC 3 cut(s) 132, 750, 769
HpyF3I CTNAG 3 cut(s) 316, 749, 759
HpySE526I ACGT 1 cut(s) 357
Hsp92II CATG 3 cut(s) 113, 296, 799
KpnI GGTACC 2 cut(s) 105, 236
Kzo9I GATC 3 cut(s) 139, 157, 798
Lsp1109I GCAGC 2 cut(s) 400, 759
LweI GCATC 3 cut(s) 45, 55, 207
MaeI CTAG 3 cut(s) 588, 599, 636
MaeII ACGT 1 cut(s) 357
MaeIII GTNAC 1 cut(s) 256
MalI GATC 3 cut(s) 141, 159, 800
MboI GATC 3 cut(s) 139, 157, 798
MflI RGATCY 2 cut(s) 139, 157
MhlI GDGCHC 1 cut(s) 625
MluCI AATT 9 cut(s) 55, 71, 117, 241, 311, 392, 459, 486, 866
MnlI CCTC 7 cut(s) 130, 158, 185, 286, 540, 584, 739
Mph1103I ATGCAT 1 cut(s) 38
MseI TTAA 2 cut(s) 144, 225
MslI CAYNNNNRTG 2 cut(s) 41, 215
MspA1I CMGCKG 2 cut(s) 748, 772
MspI CCGG 1 cut(s) 713
MspR9I CCNGG 4 cut(s) 97, 237, 515, 713
Mva1269I GAATGC 1 cut(s) 574
MvaI CCWGG 3 cut(s) 97, 237, 515
MwoI GCNNNNNNNGC 3 cut(s) 132, 750, 769
NciI CCSGG 1 cut(s) 713
NdeII GATC 3 cut(s) 139, 157, 798
NlaIII CATG 3 cut(s) 113, 296, 799
NlaIV GGNNCC 7 cut(s) 103, 159, 234, 286, 449, 703, 767
NsiI ATGCAT 1 cut(s) 38
NspI RCATGY 1 cut(s) 113
NspV TTCGAA 1 cut(s) 643
PaeI GCATGC 1 cut(s) 113
PagI TCATGA 1 cut(s) 795
PcsI WCGNNNNNNNCGW 1 cut(s) 496
PctI GAATGC 1 cut(s) 574
PflMI CCANNNNNTGG 1 cut(s) 444
PkrI GCNGC 2 cut(s) 390, 774
Psp6I CCWGG 3 cut(s) 95, 235, 513
PspFI CCCAGC 1 cut(s) 105
PspGI CCWGG 3 cut(s) 95, 235, 513
PspN4I GGNNCC 7 cut(s) 103, 159, 234, 286, 449, 703, 767
PspPI GGNCC 3 cut(s) 615, 726, 766
PstI CTGCAG 1 cut(s) 777
PstNI CAGNNNCTG 1 cut(s) 173
PsuI RGATCY 2 cut(s) 139, 157
PvuII CAGCTG 2 cut(s) 748, 772
RsaI GTAC 2 cut(s) 103, 234
RsaNI GTAC 2 cut(s) 102, 233
RseI CAYNNNNRTG 2 cut(s) 41, 215
SaqAI TTAA 2 cut(s) 144, 225
SatI GCNGC 2 cut(s) 389, 773
Sau3AI GATC 3 cut(s) 139, 157, 798
Sau96I GGNCC 3 cut(s) 615, 726, 766
ScrFI CCNGG 4 cut(s) 97, 237, 515, 713
SduI GDGCHC 1 cut(s) 625
SfaNI GCATC 3 cut(s) 45, 55, 207
SfcI CTRYAG 1 cut(s) 773
SfuI TTCGAA 1 cut(s) 643
SinI GGWCC 2 cut(s) 615, 726
SmiMI CAYNNNNRTG 2 cut(s) 41, 215
SmlI CTYRAG 1 cut(s) 556
SmoI CTYRAG 1 cut(s) 556
SphI GCATGC 1 cut(s) 113
Sse9I AATT 9 cut(s) 55, 71, 117, 241, 311, 392, 459, 486, 866
SsiI CCGC 3 cut(s) 246, 594, 763
SspMI CTAG 3 cut(s) 588, 599, 636
StyD4I CCNGG 4 cut(s) 95, 235, 513, 711
TaaI ACNGT 1 cut(s) 256
TaiI ACGT 1 cut(s) 360
TaqI TCGA 2 cut(s) 278, 643
TasI AATT 9 cut(s) 55, 71, 117, 241, 311, 392, 459, 486, 866
Tru1I TTAA 2 cut(s) 144, 225
Tru9I TTAA 2 cut(s) 144, 225
TscAI CASTG 4 cut(s) 460, 625, 760, 782
TseI GCWGC 2 cut(s) 388, 772
TspDTI ATGAA 2 cut(s) 522, 784
TspGWI ACGGA 1 cut(s) 690
TspRI CASTG 4 cut(s) 460, 625, 760, 782
Van91I CCANNNNNTGG 1 cut(s) 444
VneI GTGCAC 1 cut(s) 621
VpaK11BI GGWCC 2 cut(s) 615, 726
XapI RAATTY 4 cut(s) 55, 71, 241, 311
XceI RCATGY 1 cut(s) 113
XmiI GTMKAC 1 cut(s) 481
XspI CTAG 3 cut(s) 588, 599, 636
Zsp2I ATGCAT 1 cut(s) 38
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.