Prupe.7G233200_v2.0.a1

guanine nucleotide exchange factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
20354906 .. 20357898
2993 bp
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UTR
Exon/CDS
Intron
Prupe.7G233200.1

Sequence Viewer

Length: 1662 bp
ATGGTCCGAGCTTTTACAACCCAAGCCACAATGCAGAAGGCTAAATCTTTCCAGTTGAAACGTATGTTTGAGATTCCGAGACATCTTCAGAATTTGATCTTTGAGAATGGGCAGGACGGCGAAGGAGACGGCGAAAATGTTCAATTACTGAGTCCATGCTCCAGGACTGCTGCAGAAGACGGTCCGATCGAGGCACAAGGAATGTGGGGAGCTAATCATGATAAGGGTACAGCTTCAGATGGGGACCAAGGAGAAAGGATAAAAAGTCCTATAGACAAGAAACCTTCAGATATGGAAATGATGAAGGAAAGGTTTTCTAAGCTGCTTTTGGGTGAAGATATGTCAGGTGGTGGAAAGGGTGTCTCTTCGGCTTTGGCTTTATCCAATTCCATAACCAACCTAGCAGCATCTGTTTTTGGAGAACAAAGGAAACTAGAGCCTATGTCTCCTGATAGGAAAGCGAGGTGGGTGAAAGAAATCGGCTGGCTTTTGTCTGTGACAGATCACATCGTTGAATTCGTCCCTTCACAACAGAACGGAACAAACATGGAGATTATGGTGACTCGGCAAAGAAATGATCTGCACATGAACATTCCTGCCCTACGCAAGCTCGATGGAATGCTCATTGGCCACCTGGATAGCTTTGGAACCCCAAGTGAGTTCTGGTATGTGAAAAGAGATGCTCAAGACTCTGAAAAGGGTGATGATGCCCCAAGAAATGAAGAGAAATGGTGGAAACCCACTGTTAAAGTCCCGCCCGAAGGGCTATCAGATGAATGTCGAAGATGGCTGCAATCTCAGAAGGAATCTGTGAACCAAGTACTAAAAGCAGCAATGGCGATTAACGCTCAAGTACTTTCAGAAATGGAGATACCTGATAACTACATTGAATCCCTCCCTAAGAATGGTAGAGCCAGCCTGGGTGATTCAATCTATAAGTGCATAACAGTGGACTACTTTGATCCTGTCGAATTTTTTGACACCATGGACTTGTCCACAGAGCACAAAGTGCTTGACCTCAAAGACAGGATTGAGGCCTCTATTGTCATTTGGAAGAGGAAGATGAACCACAAGGATGGAAAGTCTTCATGGAGTTCAGTTGTGAGCTTGGAGAAGAGAGAACTCTTTGAAGAGAGAGTGGAGACCATATTACTCCTATTAAAGCAGAAGTTCCCAGGAATTCCACAATCTGCTCTTGACATAAGCAAAATTCAATACAATAAGGATGTGGGGTATGCTATTCTAGAGAGCTATTCAAGGGTAATAGAAAGCTTGGCCTTCAACGTCATGTCTATGGTTGAAGATGTTCTTTATGCTGATAATCAAGCTCGAAAGGCGTCATCAAACAGGAGGCTTTCAGTGGACTCATCATCACCATTTACAGATAATGGGAGGTCCCCTTATGCTAGGGAAGACGCGGACAGGTTGAGTTCTTCAGAGACACCAACAAAGACACTCTTTGAGTTCATGGGCTGGAATGCAGAAACAGACGAGCCTGATATGGAGAAGGATAGCTCCACAGGCAATAAGGAGAGCTACTTTAAAGAAGACACTGAAAAGAGTATGAGCAAACCTCCTGCTAACATAAACACCAAGAGATTTTCCTACTTAGAGAAGCTTGAGAAGTTGAGTGGTCTAAGAAGTCCAACAGCTCGGCATTGA

Protein Analysis

554

Amino Acids

62.5

Weight (kDa)

5.45

Isoelectric Point (pI)

54.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010910)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 1418
AciI CCGC 2 cut(s) 755, 1418
AclWI GGATC 1 cut(s) 956
AcoI YGGCCR 1 cut(s) 628
AcsI RAATTY 5 cut(s) 91, 515, 971, 1179, 1209
AcuI CTGAAG 4 cut(s) 71, 219, 270, 1419
AcyI GRCGYC 1 cut(s) 1337
AdeI CACNNNGTG 1 cut(s) 1009
AfaI GTAC 3 cut(s) 229, 822, 855
AfiI CCNNNNNNNGG 2 cut(s) 761, 905
AjnI CCWGG 4 cut(s) 161, 633, 918, 1174
Alw21I GWGCWC 1 cut(s) 1005
Alw26I GTCTC 6 cut(s) 73, 120, 367, 450, 1136, 1433
AlwI GGATC 1 cut(s) 956
AlwNI CAGNNNCTG 1 cut(s) 410
AoxI GGCC 3 cut(s) 628, 1035, 1275
ApeKI GCWGC 5 cut(s) 170, 322, 404, 790, 830
ApoI RAATTY 5 cut(s) 91, 515, 971, 1179, 1209
Asp700I GAANNNNTTC 3 cut(s) 138, 1084, 1305
AspS9I GGNCC 4 cut(s) 4, 182, 244, 1395
AsuHPI GGTGA 6 cut(s) 344, 481, 571, 713, 935, 1365
AvaII GGWCC 4 cut(s) 4, 182, 244, 1395
BalI TGGCCA 1 cut(s) 630
BbsI GAAGAC 4 cut(s) 183, 1077, 1419, 1554
Bbv12I GWGCWC 1 cut(s) 1005
BbvI GCAGC 5 cut(s) 157, 309, 416, 777, 842
BccI CCATC 4 cut(s) 233, 608, 780, 1070
BceAI ACGGC 2 cut(s) 133, 145
BciT130I CCWGG 4 cut(s) 163, 635, 920, 1176
BcoDI GTCTC 6 cut(s) 73, 120, 367, 450, 1136, 1433
BfaI CTAG 4 cut(s) 401, 434, 1244, 1407
BfmI CTRYAG 2 cut(s) 171, 270
BglI GCCNNNNNGGC 1 cut(s) 763
BisI GCNGC 5 cut(s) 171, 323, 405, 791, 831
BlsI GCNGC 5 cut(s) 172, 324, 406, 792, 832
BmcAI AGTACT 2 cut(s) 822, 855
Bme1390I CCNGG 4 cut(s) 163, 635, 920, 1176
Bme18I GGWCC 4 cut(s) 4, 182, 244, 1395
BmgT120I GGNCC 4 cut(s) 4, 182, 244, 1395
BmiI GGNNCC 3 cut(s) 245, 649, 1397
BmrFI CCNGG 4 cut(s) 163, 635, 920, 1176
BmsI GCATC 3 cut(s) 416, 670, 697
BpiI GAAGAC 4 cut(s) 183, 1077, 1419, 1554
BplI GAGNNNNNCTC 2 cut(s) 1558, 1590
BpmI CTGGAG 1 cut(s) 145
BpuEI CTTGAG 3 cut(s) 669, 834, 1640
BsaHI GRCGYC 1 cut(s) 1337
BsaI GGTCTC 1 cut(s) 1136
BsaJI CCNNGG 4 cut(s) 247, 919, 984, 1174
Bsc4I CCNNNNNNNGG 2 cut(s) 761, 905
Bse1I ACTGG 1 cut(s) 52
Bse3DI GCAATG 1 cut(s) 840
BseBI CCWGG 4 cut(s) 163, 635, 920, 1176
BseDI CCNNGG 4 cut(s) 247, 919, 984, 1174
BseGI GGATG 2 cut(s) 1081, 1231
BseLI CCNNNNNNNGG 2 cut(s) 761, 905
BseMI GCAATG 1 cut(s) 840
BseMII CTCAG 2 cut(s) 140, 812
BseNI ACTGG 1 cut(s) 52
BseXI GCAGC 5 cut(s) 157, 309, 416, 777, 842
BsgI GTGCAG 1 cut(s) 566
Bsh1236I CGCG 1 cut(s) 1418
Bsh1285I CGRYCG 1 cut(s) 189
BshFI GGCC 3 cut(s) 630, 1037, 1277
BsiEI CGRYCG 1 cut(s) 189
BsiHKAI GWGCWC 1 cut(s) 1005
BslFI GGGAC 4 cut(s) 257, 506, 737, 1381
BslI CCNNNNNNNGG 2 cut(s) 761, 905
BsmAI GTCTC 6 cut(s) 73, 120, 367, 450, 1136, 1433
BsmBI CGTCTC 1 cut(s) 120
BsmFI GGGAC 4 cut(s) 257, 506, 737, 1381
BsmI GAATGC 2 cut(s) 624, 1483
BsnI GGCC 3 cut(s) 630, 1037, 1277
Bso31I GGTCTC 1 cut(s) 1136
Bsp1286I GDGCHC 1 cut(s) 1005
Bsp143I GATC 5 cut(s) 96, 186, 502, 577, 961
Bsp19I CCATGG 1 cut(s) 984
BspACI CCGC 2 cut(s) 755, 1418
BspANI GGCC 3 cut(s) 630, 1037, 1277
BspCNI CTCAG 2 cut(s) 141, 811
BspFNI CGCG 1 cut(s) 1418
BspHI TCATGA 1 cut(s) 217
BspLI GGNNCC 3 cut(s) 245, 649, 1397
BspMAI CTGCAG 1 cut(s) 175
BspPI GGATC 1 cut(s) 956
BspTNI GGTCTC 1 cut(s) 1136
BsrDI GCAATG 1 cut(s) 840
BsrI ACTGG 1 cut(s) 52
BssECI CCNNGG 4 cut(s) 247, 919, 984, 1174
BssMI GATC 5 cut(s) 96, 186, 502, 577, 961
BssNI GRCGYC 1 cut(s) 1337
BssT1I CCWWGG 2 cut(s) 247, 984
Bst2UI CCWGG 4 cut(s) 163, 635, 920, 1176
Bst4CI ACNGT 3 cut(s) 182, 745, 949
Bst6I CTCTTC 5 cut(s) 370, 717, 1049, 1109, 1125
BstACI GRCGYC 1 cut(s) 1337
BstAPI GCANNNNNTGC 1 cut(s) 1009
BstC8I GCNNGC 3 cut(s) 485, 608, 916
BstDEI CTNAG 6 cut(s) 149, 318, 798, 900, 1609, 1637
BstDSI CCRYGG 1 cut(s) 984
BstF5I GGATG 2 cut(s) 1081, 1231
BstFNI CGCG 1 cut(s) 1418
BstKTI GATC 5 cut(s) 99, 189, 505, 580, 964
BstMAI GTCTC 6 cut(s) 73, 120, 367, 450, 1136, 1433
BstMBI GATC 5 cut(s) 96, 186, 502, 577, 961
BstMCI CGRYCG 1 cut(s) 189
BstMWI GCNNNNNNNGC 6 cut(s) 763, 836, 845, 1009, 1334, 1521
BstNI CCWGG 4 cut(s) 163, 635, 920, 1176
BstSCI CCNGG 4 cut(s) 161, 633, 918, 1174
BstSFI CTRYAG 2 cut(s) 171, 270
BstUI CGCG 1 cut(s) 1418
BstV1I GCAGC 5 cut(s) 157, 309, 416, 777, 842
BstV2I GAAGAC 4 cut(s) 183, 1077, 1419, 1554
BstXI CCANNNNNNTGG 1 cut(s) 1076
BsuRI GGCC 3 cut(s) 630, 1037, 1277
BtgI CCRYGG 1 cut(s) 984
BtsCI GGATG 2 cut(s) 1081, 1231
BtsIMutI CAGTG 4 cut(s) 741, 954, 1365, 1551
Cac8I GCNNGC 3 cut(s) 485, 608, 916
CaiI CAGNNNCTG 1 cut(s) 410
CciI TCATGA 1 cut(s) 217
Cfr13I GGNCC 4 cut(s) 4, 182, 244, 1395
CpoI CGGWCCG 1 cut(s) 182
CseI GACGC 2 cut(s) 1326, 1424
Csp6I GTAC 3 cut(s) 228, 821, 854
CspCI CAANNNNNGTGG 2 cut(s) 185, 220
CspI CGGWCCG 1 cut(s) 182
CviAII CATG 8 cut(s) 156, 218, 547, 586, 985, 1089, 1288, 1468
CviQI GTAC 3 cut(s) 228, 821, 854
DdeI CTNAG 6 cut(s) 149, 318, 798, 900, 1609, 1637
DpnI GATC 5 cut(s) 98, 188, 504, 579, 963
DpnII GATC 5 cut(s) 96, 186, 502, 577, 961
DraI TTTAAA 1 cut(s) 1543
DraIII CACNNNGTG 1 cut(s) 1009
EaeI YGGCCR 1 cut(s) 628
Eam1104I CTCTTC 5 cut(s) 370, 717, 1049, 1109, 1125
EarI CTCTTC 5 cut(s) 370, 717, 1049, 1109, 1125
Eco130I CCWWGG 2 cut(s) 247, 984
Eco147I AGGCCT 1 cut(s) 1037
Eco31I GGTCTC 1 cut(s) 1136
Eco47I GGWCC 4 cut(s) 4, 182, 244, 1395
Eco57I CTGAAG 4 cut(s) 71, 219, 270, 1419
EcoO109I RGGNCCY 1 cut(s) 1395
EcoRI GAATTC 2 cut(s) 515, 1179
EcoRII CCWGG 4 cut(s) 161, 633, 918, 1174
EcoT14I CCWWGG 2 cut(s) 247, 984
ErhI CCWWGG 2 cut(s) 247, 984
Esp3I CGTCTC 1 cut(s) 120
FaeI CATG 8 cut(s) 159, 221, 550, 589, 988, 1092, 1291, 1471
FalI AAGNNNNNCTT 4 cut(s) 1293, 1325, 1442, 1474
FaqI GGGAC 4 cut(s) 257, 506, 737, 1381
FatI CATG 8 cut(s) 155, 217, 546, 585, 984, 1088, 1287, 1467
FauI CCCGC 1 cut(s) 762
Fnu4HI GCNGC 5 cut(s) 171, 323, 405, 791, 831
FokI GGATG 2 cut(s) 1088, 1238
Fsp4HI GCNGC 5 cut(s) 171, 323, 405, 791, 831
FspBI CTAG 4 cut(s) 401, 434, 1244, 1407
GluI GCNGC 5 cut(s) 171, 323, 405, 791, 831
GsuI CTGGAG 1 cut(s) 145
HaeIII GGCC 3 cut(s) 630, 1037, 1277
HgaI GACGC 2 cut(s) 1326, 1424
Hin1I GRCGYC 1 cut(s) 1337
Hin1II CATG 8 cut(s) 159, 221, 550, 589, 988, 1092, 1291, 1471
HindIII AAGCTT 2 cut(s) 1270, 1616
HinfI GANTC 8 cut(s) 73, 151, 562, 689, 806, 890, 926, 1364
HphI GGTGA 6 cut(s) 344, 481, 571, 713, 935, 1365
Hpy166II GTNNAC 4 cut(s) 814, 952, 996, 1363
Hpy188III TCNNGA 5 cut(s) 218, 449, 686, 1196, 1244
Hpy8I GTNNAC 4 cut(s) 814, 952, 996, 1363
HpyAV CCTTC 9 cut(s) 31, 116, 294, 298, 534, 755, 796, 1288, 1501
HpyCH4III ACNGT 3 cut(s) 182, 745, 949
HpyCH4IV ACGT 2 cut(s) 61, 1284
HpyCH4V TGCA 6 cut(s) 34, 173, 583, 793, 942, 1481
HpyF10VI GCNNNNNNNGC 6 cut(s) 763, 836, 845, 1009, 1334, 1521
HpyF3I CTNAG 6 cut(s) 149, 318, 798, 900, 1609, 1637
HpySE526I ACGT 2 cut(s) 61, 1284
Hsp92I GRCGYC 1 cut(s) 1337
Hsp92II CATG 8 cut(s) 159, 221, 550, 589, 988, 1092, 1291, 1471
Kzo9I GATC 5 cut(s) 96, 186, 502, 577, 961
LmnI GCTCC 3 cut(s) 164, 209, 1520
Lsp1109I GCAGC 5 cut(s) 157, 309, 416, 777, 842
LweI GCATC 3 cut(s) 416, 670, 697
MaeI CTAG 4 cut(s) 401, 434, 1244, 1407
MaeII ACGT 2 cut(s) 61, 1284
MaeIII GTNAC 2 cut(s) 496, 559
MalI GATC 5 cut(s) 98, 188, 504, 579, 963
MboI GATC 5 cut(s) 96, 186, 502, 577, 961
MhlI GDGCHC 1 cut(s) 1005
MlsI TGGCCA 1 cut(s) 630
MluCI AATT 7 cut(s) 91, 143, 385, 515, 971, 1179, 1209
MluNI TGGCCA 1 cut(s) 630
MlyI GAGTC 4 cut(s) 160, 556, 683, 1358
Mox20I TGGCCA 1 cut(s) 630
MroXI GAANNNNTTC 3 cut(s) 138, 1084, 1305
MscI TGGCCA 1 cut(s) 630
MseI TTAA 4 cut(s) 747, 843, 1160, 1542
MslI CAYNNNNRTG 3 cut(s) 947, 1074, 1292
Msp20I TGGCCA 1 cut(s) 630
MspR9I CCNGG 4 cut(s) 163, 635, 920, 1176
Mva1269I GAATGC 2 cut(s) 624, 1483
MvaI CCWGG 4 cut(s) 163, 635, 920, 1176
MvnI CGCG 1 cut(s) 1418
MwoI GCNNNNNNNGC 6 cut(s) 763, 836, 845, 1009, 1334, 1521
NcoI CCATGG 1 cut(s) 984
NdeII GATC 5 cut(s) 96, 186, 502, 577, 961
NlaIII CATG 8 cut(s) 159, 221, 550, 589, 988, 1092, 1291, 1471
NlaIV GGNNCC 3 cut(s) 245, 649, 1397
NmeAIII GCCGAG 2 cut(s) 544, 1633
NmuCI GTSAC 2 cut(s) 496, 559
PagI TCATGA 1 cut(s) 217
PceI AGGCCT 1 cut(s) 1037
PcsI WCGNNNNNNNCGW 2 cut(s) 186, 516
PctI GAATGC 2 cut(s) 624, 1483
PdmI GAANNNNTTC 3 cut(s) 138, 1084, 1305
PfeI GAWTC 4 cut(s) 73, 806, 890, 926
PfoI TCCNGGA 1 cut(s) 161
PkrI GCNGC 5 cut(s) 172, 324, 406, 792, 832
Ple19I CGATCG 1 cut(s) 189
PleI GAGTC 4 cut(s) 159, 556, 683, 1358
PpsI GAGTC 4 cut(s) 159, 556, 683, 1358
PpuMI RGGWCCY 1 cut(s) 1395
Psp5II RGGWCCY 1 cut(s) 1395
Psp6I CCWGG 4 cut(s) 161, 633, 918, 1174
PspGI CCWGG 4 cut(s) 161, 633, 918, 1174
PspN4I GGNNCC 3 cut(s) 245, 649, 1397
PspPI GGNCC 4 cut(s) 4, 182, 244, 1395
PspPPI RGGWCCY 1 cut(s) 1395
PstI CTGCAG 1 cut(s) 175
PstNI CAGNNNCTG 1 cut(s) 410
PvuI CGATCG 1 cut(s) 189
RsaI GTAC 3 cut(s) 229, 822, 855
RsaNI GTAC 3 cut(s) 228, 821, 854
RseI CAYNNNNRTG 3 cut(s) 947, 1074, 1292
Rsr2I CGGWCCG 1 cut(s) 182
RsrII CGGWCCG 1 cut(s) 182
SaqAI TTAA 4 cut(s) 747, 843, 1160, 1542
SatI GCNGC 5 cut(s) 171, 323, 405, 791, 831
Sau3AI GATC 5 cut(s) 96, 186, 502, 577, 961
Sau96I GGNCC 4 cut(s) 4, 182, 244, 1395
ScaI AGTACT 2 cut(s) 822, 855
SchI GAGTC 4 cut(s) 160, 556, 683, 1358
ScrFI CCNGG 4 cut(s) 163, 635, 920, 1176
SduI GDGCHC 1 cut(s) 1005
SfaNI GCATC 3 cut(s) 416, 670, 697
SfcI CTRYAG 2 cut(s) 171, 270
SinI GGWCC 4 cut(s) 4, 182, 244, 1395
SmiMI CAYNNNNRTG 3 cut(s) 947, 1074, 1292
SmlI CTYRAG 3 cut(s) 684, 849, 1619
SmoI CTYRAG 3 cut(s) 684, 849, 1619
Sse9I AATT 7 cut(s) 91, 143, 385, 515, 971, 1179, 1209
SseBI AGGCCT 1 cut(s) 1037
SsiI CCGC 2 cut(s) 755, 1418
SspMI CTAG 4 cut(s) 401, 434, 1244, 1407
StuI AGGCCT 1 cut(s) 1037
StyD4I CCNGG 4 cut(s) 161, 633, 918, 1174
StyI CCWWGG 2 cut(s) 247, 984
TaaI ACNGT 3 cut(s) 182, 745, 949
TaiI ACGT 2 cut(s) 64, 1287
TaqI TCGA 5 cut(s) 189, 612, 781, 969, 1330
TasI AATT 7 cut(s) 91, 143, 385, 515, 971, 1179, 1209
TatI WGTACW 2 cut(s) 820, 853
TfiI GAWTC 4 cut(s) 73, 806, 890, 926
Tru1I TTAA 4 cut(s) 747, 843, 1160, 1542
Tru9I TTAA 4 cut(s) 747, 843, 1160, 1542
TscAI CASTG 4 cut(s) 748, 954, 1365, 1558
TseFI GTSAC 2 cut(s) 496, 559
TseI GCWGC 5 cut(s) 170, 322, 404, 790, 830
Tsp45I GTSAC 2 cut(s) 496, 559
TspDTI ATGAA 7 cut(s) 317, 602, 735, 789, 1077, 1079, 1456
TspGWI ACGGA 1 cut(s) 552
TspRI CASTG 4 cut(s) 748, 954, 1365, 1558
VpaK11BI GGWCC 4 cut(s) 4, 182, 244, 1395
XapI RAATTY 5 cut(s) 91, 515, 971, 1179, 1209
XbaI TCTAGA 1 cut(s) 1243
XcmI CCANNNNNNNNNTGG 1 cut(s) 660
XmnI GAANNNNTTC 3 cut(s) 138, 1084, 1305
XspI CTAG 4 cut(s) 401, 434, 1244, 1407
ZrmI AGTACT 2 cut(s) 822, 855
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.