Prupe.7G246800_v2.0.a1

Belongs to the actin family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
20986055 .. 20988167
2113 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G246800.1

Sequence Viewer

Length: 1278 bp
ATGCATCAAAACGTCGTCGTGTTGGACAACGGCGGCGGCCTAATCAAAGCCGGACTCGGCGGCGAGCGCGACCCCTCAGCCATAATCCCCAACTGCGTCTACCGCCCACTCGCCTCCAAGAAATGGGTGCATCCTTCACCCAACGAGCCCATGGACCTCACCTCCGCCGCGGTCCGGCGGCCCATCGACCGCGGCTACCTAATCAACCCGGATCTCCAGCGCGAGATCTGGGCCAACCTCTTCTCCTCCCTTCTCCGGGTCAACCCGGCCCAATCGTCCCTTCTCCTGACGGAGCCCCTCTTCACCCTCCCTTCCATCCAACGCGCCACCGACGAGCTCGTCTTCGAGGACTTCAACTTCTCGTCGTTCTACGTGGCCCACTCTCCCTCCCTGGCCCACCTCTACGAGGCCAGCCAGCGGACCTTTAAGGCCCAATGCAGCCTCGTCGTTGACTGCGGCTTCTCTTTCACTCACGCCGTCCCTGTTTTCCAAAACTTCCCCATCAACTACGCCGCTAAGCGAATCGACTTGGGCGGCAAGGCCTTGACCAATTACCTCAAAGAGCTTGTATCTTACCGCTCTGTCAATGTCATGGACGAGACCTTCCTCATCGACGACGTTAAGGAGAAGCTCTGCTTTGTTTCCTTAGACGTTGCTCGTGACCTCCAGATCGCAAAGAAACAAGGGAATGCTTTCAGGTGCACGTATGTGTTGCCTGATGGTGTTACGCATACAAAAGGGTTCGTTAAGAACCCAGAAGAGGCGCAGAGATACTTGGCTTTGGGAGACGGTGACACACTTGAAGAAGTGCAGCAAAAGATGGATGTGGATCAGATGGAAGTTACAAACAAGCTGGAGGATCGAAAGAAGATTGATTTAACCAAGAATGAATTTGACTTGACAAATGAAAGGTTCCTTGTGCCGGAGATGATCTTCCATCCTGCTGATTTGGGAATGAATCAGGCTGGGCTAGCAGAGTGCATAGTTCGAGCTGTCAGTTCCTGCCATCCTCATCTTCAGCCTGTACTCTATGAAAACATTATTTTAACCGGCGGAAGCACACTATTTCCTCGACTTTCTGATAGACTAGAGAAGGAGCTGCGGCCTCTTGTTCCTGATGACTATCAAGTGAACATAACTCCTCAACAAGACCCCATACTAGGTGTTTGGCGAGGAGGATCTCTTTTAGCATCAAGTCCTGATTTTGAAGCAATGCGTGTCACCAAGGCTGAATATGAGGAGCTTGGATCTGCTCGATGTCGCAGGAGATTCTGTTAA

Protein Analysis

426

Amino Acids

47.78

Weight (kDa)

5.59

Isoelectric Point (pI)

42.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 338
AccB7I CCANNNNNTGG 1 cut(s) 123
AccBSI CCGCTC 1 cut(s) 579
AccI GTMKAC 1 cut(s) 99
AccII CGCG 5 cut(s) 69, 170, 192, 222, 324
AclWI GGATC 5 cut(s) 219, 837, 867, 1186, 1255
AcsI RAATTY 1 cut(s) 890
AcuI CTGAAG 1 cut(s) 1001
AfaI GTAC 1 cut(s) 1026
AfiI CCNNNNNNNGG 9 cut(s) 123, 174, 255, 256, 406, 417, 760, 922, 1160
AgsI TTSAA 3 cut(s) 355, 803, 1208
AjnI CCWGG 1 cut(s) 390
AjuI GAANNNNNNNTTGG 2 cut(s) 264, 296
AleI CACNNNNGTG 1 cut(s) 707
AluBI AGCT 7 cut(s) 337, 565, 631, 853, 992, 1099, 1243
AluI AGCT 7 cut(s) 337, 565, 631, 853, 992, 1099, 1243
Alw21I GWGCWC 2 cut(s) 339, 704
Alw26I GTCTC 2 cut(s) 593, 780
Alw44I GTGCAC 1 cut(s) 700
AlwI GGATC 5 cut(s) 219, 837, 867, 1186, 1255
AlwNI CAGNNNCTG 1 cut(s) 1002
ApaLI GTGCAC 1 cut(s) 700
ApeKI GCWGC 3 cut(s) 438, 811, 1099
ApoI RAATTY 1 cut(s) 890
Asp700I GAANNNNTTC 1 cut(s) 692
AspLEI GCGC 4 cut(s) 69, 222, 326, 766
AspS9I GGNCC 9 cut(s) 154, 172, 180, 231, 268, 376, 394, 420, 430
AsuC2I CCSGG 3 cut(s) 209, 257, 266
AsuHPI GGTGA 5 cut(s) 129, 151, 295, 803, 1213
AsuNHI GCTAGC 1 cut(s) 970
AvaII GGWCC 3 cut(s) 154, 172, 420
BaeGI GKGCMC 1 cut(s) 704
BanII GRGCYC 3 cut(s) 150, 297, 339
BauI CACGAG 1 cut(s) 657
BbsI GAAGAC 1 cut(s) 334
Bbv12I GWGCWC 2 cut(s) 339, 704
BbvCI CCTCAGC 1 cut(s) 76
BbvI GCAGC 3 cut(s) 450, 823, 1086
BccI CCATC 8 cut(s) 191, 323, 509, 713, 814, 829, 945, 1014
BceAI ACGGC 2 cut(s) 46, 461
BcgI CGANNNNNNTGC 2 cut(s) 427, 461
BciT130I CCWGG 1 cut(s) 392
BcnI CCSGG 3 cut(s) 209, 257, 266
BcoDI GTCTC 2 cut(s) 593, 780
BfaI CTAG 3 cut(s) 971, 1088, 1160
BglII AGATCT 1 cut(s) 225
BlpI GCTNAGC 1 cut(s) 516
Bme1390I CCNGG 4 cut(s) 209, 257, 266, 392
Bme18I GGWCC 3 cut(s) 154, 172, 420
BmgT120I GGNCC 9 cut(s) 154, 172, 180, 231, 268, 376, 394, 420, 430
BmiI GGNNCC 2 cut(s) 294, 914
BmrFI CCNGG 4 cut(s) 209, 257, 266, 392
BmsI GCATC 3 cut(s) 13, 139, 1199
BmtI GCTAGC 1 cut(s) 974
BpiI GAAGAC 1 cut(s) 334
BpmI CTGGAG 3 cut(s) 200, 650, 875
Bpu10I CCTNAGC 1 cut(s) 76
Bpu1102I GCTNAGC 1 cut(s) 516
BpuMI CCSGG 3 cut(s) 209, 257, 266
BsaAI YACGTR 2 cut(s) 373, 705
BsaBI GATNNNNATC 2 cut(s) 828, 1122
BsaI GGTCTC 1 cut(s) 593
BsaJI CCNNGG 5 cut(s) 150, 168, 190, 390, 1224
BsaXI ACNNNNNCTCC 7 cut(s) 146, 176, 227, 257, 371, 401, 1258
Bsc4I CCNNNNNNNGG 9 cut(s) 123, 174, 255, 256, 406, 417, 760, 922, 1160
Bse118I RCCGGY 1 cut(s) 1049
Bse3DI GCAATG 1 cut(s) 1218
Bse8I GATNNNNATC 2 cut(s) 828, 1122
BseBI CCWGG 1 cut(s) 392
BseDI CCNNGG 5 cut(s) 150, 168, 190, 390, 1224
BseGI GGATG 5 cut(s) 130, 315, 829, 937, 1006
BseJI GATNNNNATC 2 cut(s) 828, 1122
BseLI CCNNNNNNNGG 9 cut(s) 123, 174, 255, 256, 406, 417, 760, 922, 1160
BseMI GCAATG 1 cut(s) 1218
BseMII CTCAG 1 cut(s) 90
BseRI GAGGAG 4 cut(s) 235, 1131, 1188, 1253
BseSI GKGCMC 1 cut(s) 704
BseXI GCAGC 3 cut(s) 450, 823, 1086
BseYI CCCAGC 1 cut(s) 965
BsgI GTGCAG 1 cut(s) 830
Bsh1236I CGCG 5 cut(s) 69, 170, 192, 222, 324
Bsh1285I CGRYCG 1 cut(s) 190
BsiEI CGRYCG 1 cut(s) 190
BsiHKAI GWGCWC 2 cut(s) 339, 704
BsiSI CCGG 7 cut(s) 51, 175, 209, 256, 266, 923, 1050
BslFI GGGAC 2 cut(s) 262, 464
BslI CCNNNNNNNGG 9 cut(s) 123, 174, 255, 256, 406, 417, 760, 922, 1160
BsmAI GTCTC 2 cut(s) 593, 780
BsmBI CGTCTC 1 cut(s) 780
BsmFI GGGAC 2 cut(s) 262, 464
BsmI GAATGC 1 cut(s) 694
Bso31I GGTCTC 1 cut(s) 593
Bsp1286I GDGCHC 4 cut(s) 150, 297, 339, 704
Bsp143I GATC 8 cut(s) 211, 225, 669, 829, 859, 930, 1178, 1247
Bsp1720I GCTNAGC 1 cut(s) 516
Bsp19I CCATGG 1 cut(s) 150
BspCNI CTCAG 1 cut(s) 89
BspFNI CGCG 5 cut(s) 69, 170, 192, 222, 324
BspLI GGNNCC 2 cut(s) 294, 914
BspOI GCTAGC 1 cut(s) 974
BspPI GGATC 5 cut(s) 219, 837, 867, 1186, 1255
BspTNI GGTCTC 1 cut(s) 593
BsrBI CCGCTC 1 cut(s) 579
BsrDI GCAATG 1 cut(s) 1218
BsrFI RCCGGY 1 cut(s) 1049
BssAI RCCGGY 1 cut(s) 1049
BssECI CCNNGG 5 cut(s) 150, 168, 190, 390, 1224
BssMI GATC 8 cut(s) 211, 225, 669, 829, 859, 930, 1178, 1247
BssSI CACGAG 1 cut(s) 657
BssT1I CCWWGG 2 cut(s) 150, 1224
Bst2BI CACGAG 1 cut(s) 657
Bst2UI CCWGG 1 cut(s) 392
Bst4CI ACNGT 1 cut(s) 791
Bst6I CTCTTC 3 cut(s) 245, 305, 753
BstBAI YACGTR 2 cut(s) 373, 705
BstC8I GCNNGC 4 cut(s) 65, 412, 416, 972
BstDEI CTNAG 3 cut(s) 76, 516, 646
BstDSI CCRYGG 3 cut(s) 150, 168, 190
BstENI CCTNNNNNAGG 1 cut(s) 404
BstF5I GGATG 5 cut(s) 130, 315, 829, 937, 1006
BstFNI CGCG 5 cut(s) 69, 170, 192, 222, 324
BstHHI GCGC 4 cut(s) 69, 222, 326, 766
BstKTI GATC 8 cut(s) 214, 228, 672, 832, 862, 933, 1181, 1250
BstMAI GTCTC 2 cut(s) 593, 780
BstMBI GATC 8 cut(s) 211, 225, 669, 829, 859, 930, 1178, 1247
BstMCI CGRYCG 1 cut(s) 190
BstMWI GCNNNNNNNGC 3 cut(s) 66, 102, 971
BstNI CCWGG 1 cut(s) 392
BstSCI CCNGG 4 cut(s) 207, 255, 264, 390
BstSLI GKGCMC 1 cut(s) 704
BstUI CGCG 5 cut(s) 69, 170, 192, 222, 324
BstV1I GCAGC 3 cut(s) 450, 823, 1086
BstV2I GAAGAC 1 cut(s) 334
BstX2I RGATCY 4 cut(s) 211, 225, 1178, 1247
BstYI RGATCY 4 cut(s) 211, 225, 1178, 1247
BtgI CCRYGG 3 cut(s) 150, 168, 190
BtsCI GGATG 5 cut(s) 130, 315, 829, 937, 1006
Cac8I GCNNGC 4 cut(s) 65, 412, 416, 972
CaiI CAGNNNCTG 1 cut(s) 1002
CfoI GCGC 4 cut(s) 69, 222, 326, 766
Cfr10I RCCGGY 1 cut(s) 1049
Cfr13I GGNCC 9 cut(s) 154, 172, 180, 231, 268, 376, 394, 420, 430
Cfr42I CCGCGG 2 cut(s) 171, 193
CpoI CGGWCCG 1 cut(s) 172
CseI GACGC 1 cut(s) 85
Csp6I GTAC 1 cut(s) 1025
CspI CGGWCCG 1 cut(s) 172
CviAII CATG 2 cut(s) 151, 592
CviQI GTAC 1 cut(s) 1025
DdeI CTNAG 3 cut(s) 76, 516, 646
DpnI GATC 8 cut(s) 213, 227, 671, 831, 861, 932, 1180, 1249
DpnII GATC 8 cut(s) 211, 225, 669, 829, 859, 930, 1178, 1247
DrdI GACNNNNNNGTC 1 cut(s) 338
DseDI GACNNNNNNGTC 1 cut(s) 338
Eam1104I CTCTTC 3 cut(s) 245, 305, 753
EarI CTCTTC 3 cut(s) 245, 305, 753
EciI GGCGGA 2 cut(s) 154, 1068
Ecl136II GAGCTC 1 cut(s) 337
Eco130I CCWWGG 2 cut(s) 150, 1224
Eco147I AGGCCT 1 cut(s) 542
Eco24I GRGCYC 3 cut(s) 150, 297, 339
Eco31I GGTCTC 1 cut(s) 593
Eco47I GGWCC 3 cut(s) 154, 172, 420
Eco53kI GAGCTC 1 cut(s) 337
Eco57I CTGAAG 1 cut(s) 1001
EcoICRI GAGCTC 1 cut(s) 337
EcoNI CCTNNNNNAGG 1 cut(s) 404
EcoRII CCWGG 1 cut(s) 390
EcoT14I CCWWGG 2 cut(s) 150, 1224
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 3 cut(s) 150, 297, 339
ErhI CCWWGG 2 cut(s) 150, 1224
Esp3I CGTCTC 1 cut(s) 780
FaeI CATG 2 cut(s) 154, 595
FalI AAGNNNNNCTT 2 cut(s) 620, 652
FaqI GGGAC 2 cut(s) 262, 464
FatI CATG 2 cut(s) 150, 591
FblI GTMKAC 1 cut(s) 99
FokI GGATG 5 cut(s) 117, 302, 836, 924, 993
FriOI GRGCYC 3 cut(s) 150, 297, 339
FspBI CTAG 3 cut(s) 971, 1088, 1160
GlaI GCGC 4 cut(s) 68, 221, 325, 765
GsaI CCCAGC 1 cut(s) 969
GsuI CTGGAG 3 cut(s) 200, 650, 875
HapII CCGG 7 cut(s) 51, 175, 209, 256, 266, 923, 1050
HgaI GACGC 1 cut(s) 85
HhaI GCGC 4 cut(s) 69, 222, 326, 766
Hin1II CATG 2 cut(s) 154, 595
Hin6I GCGC 4 cut(s) 67, 220, 324, 764
HinP1I GCGC 4 cut(s) 67, 220, 324, 764
HincII GTYRAC 2 cut(s) 262, 451
HindII GTYRAC 2 cut(s) 262, 451
HinfI GANTC 4 cut(s) 54, 522, 958, 1269
HpaII CCGG 7 cut(s) 51, 175, 209, 256, 266, 923, 1050
HphI GGTGA 5 cut(s) 129, 151, 295, 803, 1213
Hpy166II GTNNAC 5 cut(s) 100, 262, 451, 702, 1132
Hpy188I TCNGA 2 cut(s) 834, 1081
Hpy188III TCNNGA 5 cut(s) 286, 659, 667, 1115, 1199
Hpy8I GTNNAC 5 cut(s) 100, 262, 451, 702, 1132
Hpy99I CGWCG 7 cut(s) 17, 20, 335, 367, 449, 617, 620
HpyAV CCTTC 6 cut(s) 144, 260, 290, 321, 613, 1087
HpyCH4III ACNGT 1 cut(s) 791
HpyCH4IV ACGT 5 cut(s) 12, 372, 618, 651, 704
HpyCH4V TGCA 6 cut(s) 4, 130, 438, 702, 811, 981
HpyF10VI GCNNNNNNNGC 3 cut(s) 66, 102, 971
HpyF3I CTNAG 3 cut(s) 76, 516, 646
HpySE526I ACGT 5 cut(s) 12, 372, 618, 651, 704
Hsp92II CATG 2 cut(s) 154, 595
HspAI GCGC 4 cut(s) 67, 220, 324, 764
KspI CCGCGG 2 cut(s) 171, 193
Kzo9I GATC 8 cut(s) 211, 225, 669, 829, 859, 930, 1178, 1247
LmnI GCTCC 3 cut(s) 292, 1096, 1240
Lsp1109I GCAGC 3 cut(s) 450, 823, 1086
LweI GCATC 3 cut(s) 13, 139, 1199
MaeI CTAG 3 cut(s) 971, 1088, 1160
MaeII ACGT 5 cut(s) 12, 372, 618, 651, 704
MaeIII GTNAC 5 cut(s) 659, 724, 791, 841, 1219
MalI GATC 8 cut(s) 213, 227, 671, 831, 861, 932, 1180, 1249
MbiI CCGCTC 1 cut(s) 579
MboI GATC 8 cut(s) 211, 225, 669, 829, 859, 930, 1178, 1247
MboII GAAGA 8 cut(s) 232, 292, 334, 770, 815, 880, 925, 1007
MflI RGATCY 4 cut(s) 211, 225, 1178, 1247
MhlI GDGCHC 4 cut(s) 150, 297, 339, 704
MluCI AATT 2 cut(s) 550, 890
MlyI GAGTC 1 cut(s) 48
MmeI TCCRAC 1 cut(s) 343
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 1 cut(s) 692
MseI TTAA 6 cut(s) 426, 621, 747, 878, 1046, 1276
MslI CAYNNNNRTG 1 cut(s) 707
MspA1I CMGCKG 3 cut(s) 170, 192, 418
MspI CCGG 7 cut(s) 51, 175, 209, 256, 266, 923, 1050
MspR9I CCNGG 4 cut(s) 209, 257, 266, 392
Mva1269I GAATGC 1 cut(s) 694
MvaI CCWGG 1 cut(s) 392
MvnI CGCG 5 cut(s) 69, 170, 192, 222, 324
MwoI GCNNNNNNNGC 3 cut(s) 66, 102, 971
NciI CCSGG 3 cut(s) 209, 257, 266
NcoI CCATGG 1 cut(s) 150
NdeII GATC 8 cut(s) 211, 225, 669, 829, 859, 930, 1178, 1247
NheI GCTAGC 1 cut(s) 970
NlaIII CATG 2 cut(s) 154, 595
NlaIV GGNNCC 2 cut(s) 294, 914
NmeAIII GCCGAG 1 cut(s) 36
NmuCI GTSAC 3 cut(s) 659, 791, 1219
NsiI ATGCAT 1 cut(s) 6
OliI CACNNNNGTG 1 cut(s) 707
PceI AGGCCT 1 cut(s) 542
PctI GAATGC 1 cut(s) 694
PdmI GAANNNNTTC 1 cut(s) 692
PfeI GAWTC 3 cut(s) 522, 958, 1269
PflMI CCANNNNNTGG 1 cut(s) 123
PleI GAGTC 1 cut(s) 48
PpsI GAGTC 1 cut(s) 48
Ppu21I YACGTR 2 cut(s) 373, 705
Psp124BI GAGCTC 1 cut(s) 339
Psp6I CCWGG 1 cut(s) 390
PspFI CCCAGC 1 cut(s) 965
PspGI CCWGG 1 cut(s) 390
PspN4I GGNNCC 2 cut(s) 294, 914
PspPI GGNCC 9 cut(s) 154, 172, 180, 231, 268, 376, 394, 420, 430
PstNI CAGNNNCTG 1 cut(s) 1002
PsuI RGATCY 4 cut(s) 211, 225, 1178, 1247
RsaI GTAC 1 cut(s) 1026
RsaNI GTAC 1 cut(s) 1025
RseI CAYNNNNRTG 1 cut(s) 707
Rsr2I CGGWCCG 1 cut(s) 172
RsrII CGGWCCG 1 cut(s) 172
SacI GAGCTC 1 cut(s) 339
SacII CCGCGG 2 cut(s) 171, 193
SaqAI TTAA 6 cut(s) 426, 621, 747, 878, 1046, 1276
Sau3AI GATC 8 cut(s) 211, 225, 669, 829, 859, 930, 1178, 1247
Sau96I GGNCC 9 cut(s) 154, 172, 180, 231, 268, 376, 394, 420, 430
SchI GAGTC 1 cut(s) 48
ScrFI CCNGG 4 cut(s) 209, 257, 266, 392
SduI GDGCHC 4 cut(s) 150, 297, 339, 704
SfaNI GCATC 3 cut(s) 13, 139, 1199
Sfr303I CCGCGG 2 cut(s) 171, 193
SgrBI CCGCGG 2 cut(s) 171, 193
SinI GGWCC 3 cut(s) 154, 172, 420
SmiMI CAYNNNNRTG 1 cut(s) 707
Sse9I AATT 2 cut(s) 550, 890
SseBI AGGCCT 1 cut(s) 542
SspMI CTAG 3 cut(s) 971, 1088, 1160
SstI GAGCTC 1 cut(s) 339
StuI AGGCCT 1 cut(s) 542
StyD4I CCNGG 4 cut(s) 207, 255, 264, 390
StyI CCWWGG 2 cut(s) 150, 1224
TaaI ACNGT 1 cut(s) 791
TaiI ACGT 5 cut(s) 15, 375, 621, 654, 707
TaqI TCGA 8 cut(s) 186, 345, 525, 612, 862, 988, 1072, 1255
TasI AATT 2 cut(s) 550, 890
TatI WGTACW 1 cut(s) 1024
TfiI GAWTC 3 cut(s) 522, 958, 1269
Tru1I TTAA 6 cut(s) 426, 621, 747, 878, 1046, 1276
Tru9I TTAA 6 cut(s) 426, 621, 747, 878, 1046, 1276
TseFI GTSAC 3 cut(s) 659, 791, 1219
TseI GCWGC 3 cut(s) 438, 811, 1099
Tsp45I GTSAC 3 cut(s) 659, 791, 1219
TspDTI ATGAA 4 cut(s) 903, 921, 971, 1047
TspGWI ACGGA 1 cut(s) 305
Van91I CCANNNNNTGG 1 cut(s) 123
VneI GTGCAC 1 cut(s) 700
VpaK11BI GGWCC 3 cut(s) 154, 172, 420
XagI CCTNNNNNAGG 1 cut(s) 404
XapI RAATTY 1 cut(s) 890
XcmI CCANNNNNNNNNTGG 1 cut(s) 148
XmiI GTMKAC 1 cut(s) 99
XmnI GAANNNNTTC 1 cut(s) 692
XspI CTAG 3 cut(s) 971, 1088, 1160
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.