Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0016050

Physical Location & Seq

Genomic Coordinates Forward (+)

21754131 .. 21757783

Gene Structure 3653 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G261900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1326 bp

ATGGCTTGCAGACTTGCAGATTCTATGTTCCTCTCCTTGGGCCCCCATCAAAATCCAATTCGAAGCCAAAGAATTGGAACCCATTATTCTTCAGGAATCTGCTATTTGAAATGGGACAGCCTTCCCCAAAAGGGCATCAAACGTCAACGGTTTTTAACTCGTAGAAATTGGACGACGGTTGCAAAAGCGGTTGCCATTCCAGTTGCACCATCTTCACCAGACAATGCTGAGTATAGAAAACAATTATCTGAAAGTTATGGTTTCAAACAAATTGGAGAACCACTCCCAGATAATGTTACGCTGAAGCATGTCATTGATACCCTTCCGAAAAAGGTTTTTGAGATTGATGATGTGAAAGCATGGAAGTCAGTTCTAATATCTGCCACTTCCTATGCATTCGGGCTCTACATGATTTCAAAAGCCCCATGGTATCTACTTCCTCTGGCTTGGGCATGGACAGGGACTGCAGTTACTGGGTTTTTTGTTATAGGTCATGATTGTGCGCACAAATCATTCTCAAGAAACAAATTAGTAGAAGACATTGTTGGAACACTGGCCTTTTTGCCGTTGATATACCCATACGAACCATGGCGGTTTAAGCATGATCGACATCATGCAAAAACAAACATGTTGATTGAGGATACAGCTTGGCAGCCTATTGCTAAAGAAGAGTTTGATTCATCTCCTCTTTTTCGCCAGGCAATCATGTATGGATATGGCCCATTTCGGCCCTGGATGTCAATAGCTCATTGGTTGCTAGTCCACTTCGATTTGAAGACGTTCAGACCAAGTGAAGTGAAAAGGGTGAAGATAAGTTTGGCTTGTGTTTTTGCGTTTATGGGGATTGGATGGCCATTGATTGTGTTCAAGACTGGGATATTGGGATGGGTAAAGTTTTGGTTGATGCCATTTTTGGGCTATCACTTTTGGATGAGTACATTCACGATGGTGCACCATACGGCACCTCATATACCATTCAAATCTGCAGATGAGTGGAATGCTGCTCAGGCTCAACTTAATGGAACAGTTCATTGTGATTACCCTCAATGGATTGAGACCCTCTGCCATGATATCAATGTCCATATACCCCACCATATATCTCCCAGGATTCCAAGTTATAACCTACGAGCGGCTCACAAGTCGCTTCAAGAAAACTGGGGAAAGTATCTGAACGAGGCTACATGGAATTGGCGTTTGATGAAGACGATACTGACAGTGTGCCACGTTTACGACAAGGAGCAGAATTACGTTGCCTTTGACCAACTTGCCCCTGGAGAGTCTCATCCAATCAAGTTCCTTAAAAAAGTGATGCCTGATTATGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006631 GO:0006633 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009314 GO:0009416 GO:0009507 GO:0009526 GO:0009536 GO:0009628 GO:0009642 GO:0009644 GO:0009892 GO:0009941 GO:0009987 GO:0010109 GO:0010205 GO:0016053 GO:0019222 GO:0019752 GO:0019904 GO:0031323 GO:0031324 GO:0031967 GO:0031975 GO:0032787 GO:0042548 GO:0043155 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043467 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0065007 GO:0071704 GO:0072330 GO:1901576 GO:1905156

KEGG Pathways

Metabolic & Signaling

ko02020 map02020

Pfam Domains

Protein Families

FA_desaturase

Protein Analysis

442

Amino Acids

51.05

Weight (kDa)

9.26

Isoelectric Point (pI)

47.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016050)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30950
fragaria_vesca	FvH4_1g01030
malus_domestica	MD15G1152700.v1.1
prunus_persica	Prupe.7G261900_v2.0.a1
pyrus_communis	pycom15g13730
rosa_chinensis	RchiOBHm_Chr2g0085771
rosa_laevigata	RLG00000015718
rosa_multiflora	Rmu_sc0009759.1_g000002
rosa_roxburghii	Rroxscaffold_2G00155050
rosa_rugosa	Rorug01G0463000
rosa_samantha	Rh2AG012300 Rh2BG012900 Rh2CG013600 Rh2DG014600
rosa_wichuraiana	Rw2G001090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1119
Acc16I	TGCGCA	1 cut(s)	504
AccB1I	GGYRCC	1 cut(s)	961
AccBSI	CCGCTC	1 cut(s)	1130
AciI	CCGC	3 cut(s)	188, 592, 1130
AcoI	YGGCCR	1 cut(s)	851
AcuI	CTGAAG	2 cut(s)	75, 323
AfaI	GTAC	1 cut(s)	937
AfiI	CCNNNNNNNGG	4 cut(s)	37, 131, 914, 1129
AflIII	ACRYGT	1 cut(s)	627
AgsI	TTSAA	7 cut(s)	109, 265, 417, 775, 868, 979, 1148
AjnI	CCWGG	4 cut(s)	696, 731, 1103, 1270
AjuI	GAANNNNNNNTTGG	4 cut(s)	528, 560, 800, 832
AleI	CACNNNNGTG	1 cut(s)	947
AluBI	AGCT	2 cut(s)	647, 746
AluI	AGCT	2 cut(s)	647, 746
Alw21I	GWGCWC	1 cut(s)	954
Alw26I	GTCTC	2 cut(s)	1049, 1284
Alw44I	GTGCAC	1 cut(s)	950
AlwNI	CAGNNNCTG	2 cut(s)	464, 473
AoxI	GGCC	5 cut(s)	40, 555, 718, 728, 851
ApaI	GGGCCC	1 cut(s)	44
ApaLI	GTGCAC	1 cut(s)	950
ApeKI	GCWGC	2 cut(s)	652, 1001
Asp700I	GAANNNNTTC	1 cut(s)	779
AspLEI	GCGC	1 cut(s)	505
AspS9I	GGNCC	4 cut(s)	40, 41, 719, 729
AsuHPI	GGTGA	2 cut(s)	207, 817
AsuII	TTCGAA	1 cut(s)	61
BaeGI	GKGCMC	2 cut(s)	44, 954
BalI	TGGCCA	1 cut(s)	853
BanI	GGYRCC	1 cut(s)	961
BanII	GRGCYC	2 cut(s)	44, 405
BbsI	GAAGAC	3 cut(s)	543, 782, 1208
Bbv12I	GWGCWC	1 cut(s)	954
BbvI	GCAGC	2 cut(s)	664, 988
BccI	CCATC	5 cut(s)	54, 217, 843, 879, 940
BceAI	ACGGC	2 cut(s)	550, 975
BciT130I	CCWGG	4 cut(s)	698, 733, 1105, 1272
BciVI	GTATCC	1 cut(s)	634
BcoDI	GTCTC	2 cut(s)	1049, 1284
BfaI	CTAG	1 cut(s)	758
BfmI	CTRYAG	2 cut(s)	465, 984
BfuI	GTATCC	1 cut(s)	634
BisI	GCNGC	3 cut(s)	653, 1002, 1131
BlsI	GCNGC	3 cut(s)	654, 1003, 1132
Bme1390I	CCNGG	4 cut(s)	698, 733, 1105, 1272
BmgT120I	GGNCC	4 cut(s)	40, 41, 719, 729
BmiI	GGNNCC	4 cut(s)	42, 43, 79, 963
BmrFI	CCNGG	4 cut(s)	698, 733, 1105, 1272
BmrI	ACTGGG	3 cut(s)	483, 882, 1165
BmsI	GCATC	3 cut(s)	144, 894, 1299
BmuI	ACTGGG	3 cut(s)	483, 882, 1165
BpiI	GAAGAC	3 cut(s)	543, 782, 1208
BplI	GAGNNNNNCTC	2 cut(s)	267, 299
BpmI	CTGGAG	1 cut(s)	1293
Bpu10I	CCTNAGC	1 cut(s)	1005
Bpu14I	TTCGAA	1 cut(s)	61
BpuEI	CTTGAG	1 cut(s)	502
BsaBI	GATNNNNATC	1 cut(s)	609
BsaI	GGTCTC	1 cut(s)	1049
BsaJI	CCNNGG	6 cut(s)	36, 425, 587, 731, 1103, 1270
Bsc4I	CCNNNNNNNGG	4 cut(s)	37, 131, 914, 1129
Bse1I	ACTGG	5 cut(s)	200, 478, 558, 877, 1160
Bse8I	GATNNNNATC	1 cut(s)	609
BseBI	CCWGG	4 cut(s)	698, 733, 1105, 1272
BseDI	CCNNGG	6 cut(s)	36, 425, 587, 731, 1103, 1270
BseGI	GGATG	5 cut(s)	741, 854, 890, 936, 1282
BseJI	GATNNNNATC	1 cut(s)	609
BseLI	CCNNNNNNNGG	4 cut(s)	37, 131, 914, 1129
BseMII	CTCAG	2 cut(s)	219, 1019
BseNI	ACTGG	5 cut(s)	200, 478, 558, 877, 1160
BseRI	GAGGAG	1 cut(s)	675
BseSI	GKGCMC	2 cut(s)	44, 954
BseXI	GCAGC	2 cut(s)	664, 988
BshFI	GGCC	5 cut(s)	42, 557, 720, 730, 853
BshNI	GGYRCC	1 cut(s)	961
BsiHKAI	GWGCWC	1 cut(s)	954
BslFI	GGGAC	2 cut(s)	128, 475
BslI	CCNNNNNNNGG	4 cut(s)	37, 131, 914, 1129
BsmAI	GTCTC	2 cut(s)	1049, 1284
BsmFI	GGGAC	2 cut(s)	128, 475
BsmI	GAATGC	2 cut(s)	395, 1003
BsnI	GGCC	5 cut(s)	42, 557, 720, 730, 853
Bso31I	GGTCTC	1 cut(s)	1049
Bsp119I	TTCGAA	1 cut(s)	61
Bsp120I	GGGCCC	1 cut(s)	40
Bsp1286I	GDGCHC	3 cut(s)	44, 405, 954
Bsp143I	GATC	1 cut(s)	604
Bsp19I	CCATGG	2 cut(s)	425, 587
BspACI	CCGC	3 cut(s)	188, 592, 1130
BspANI	GGCC	5 cut(s)	42, 557, 720, 730, 853
BspCNI	CTCAG	2 cut(s)	220, 1018
BspHI	TCATGA	1 cut(s)	493
BspLI	GGNNCC	4 cut(s)	42, 43, 79, 963
BspMAI	CTGCAG	2 cut(s)	469, 988
BspT104I	TTCGAA	1 cut(s)	61
BspT107I	GGYRCC	1 cut(s)	961
BspTNI	GGTCTC	1 cut(s)	1049
BsrBI	CCGCTC	1 cut(s)	1130
BsrI	ACTGG	5 cut(s)	200, 478, 558, 877, 1160
BssECI	CCNNGG	6 cut(s)	36, 425, 587, 731, 1103, 1270
BssMI	GATC	1 cut(s)	604
BssT1I	CCWWGG	3 cut(s)	36, 425, 587
Bst2UI	CCWGG	4 cut(s)	698, 733, 1105, 1272
Bst4CI	ACNGT	4 cut(s)	150, 178, 1027, 1216
Bst6I	CTCTTC	1 cut(s)	663
BstBI	TTCGAA	1 cut(s)	61
BstC8I	GCNNGC	1 cut(s)	7
BstDEI	CTNAG	2 cut(s)	228, 1005
BstDSI	CCRYGG	2 cut(s)	425, 587
BstF5I	GGATG	5 cut(s)	741, 854, 890, 936, 1282
BstHHI	GCGC	1 cut(s)	505
BstKTI	GATC	1 cut(s)	607
BstMAI	GTCTC	2 cut(s)	1049, 1284
BstMBI	GATC	1 cut(s)	604
BstMWI	GCNNNNNNNGC	2 cut(s)	598, 1007
BstNI	CCWGG	4 cut(s)	698, 733, 1105, 1272
BstNSI	RCATGY	2 cut(s)	311, 631
BstSCI	CCNGG	4 cut(s)	696, 731, 1103, 1270
BstSFI	CTRYAG	2 cut(s)	465, 984
BstSLI	GKGCMC	2 cut(s)	44, 954
BstV1I	GCAGC	2 cut(s)	664, 988
BstV2I	GAAGAC	3 cut(s)	543, 782, 1208
BstXI	CCANNNNNNTGG	1 cut(s)	74
BsuI	GTATCC	1 cut(s)	634
BsuRI	GGCC	5 cut(s)	42, 557, 720, 730, 853
BtgI	CCRYGG	2 cut(s)	425, 587
BtsCI	GGATG	5 cut(s)	741, 854, 890, 936, 1282
BtsIMutI	CAGTG	2 cut(s)	551, 1221
Cac8I	GCNNGC	1 cut(s)	7
CaiI	CAGNNNCTG	2 cut(s)	464, 473
CciI	TCATGA	1 cut(s)	493
CfoI	GCGC	1 cut(s)	505
Cfr13I	GGNCC	4 cut(s)	40, 41, 719, 729
Csp6I	GTAC	1 cut(s)	936
CviQI	GTAC	1 cut(s)	936
DdeI	CTNAG	2 cut(s)	228, 1005
DpnI	GATC	1 cut(s)	606
DpnII	GATC	1 cut(s)	604
EaeI	YGGCCR	1 cut(s)	851
Eam1104I	CTCTTC	1 cut(s)	663
EarI	CTCTTC	1 cut(s)	663
Eco130I	CCWWGG	3 cut(s)	36, 425, 587
Eco24I	GRGCYC	2 cut(s)	44, 405
Eco31I	GGTCTC	1 cut(s)	1049
Eco32I	GATATC	1 cut(s)	1072
Eco57I	CTGAAG	2 cut(s)	75, 323
EcoO109I	RGGNCCY	1 cut(s)	41
EcoRII	CCWGG	4 cut(s)	696, 731, 1103, 1270
EcoRV	GATATC	1 cut(s)	1072
EcoT14I	CCWWGG	3 cut(s)	36, 425, 587
EcoT22I	ATGCAT	1 cut(s)	397
EcoT38I	GRGCYC	2 cut(s)	44, 405
ErhI	CCWWGG	3 cut(s)	36, 425, 587
FalI	AAGNNNNNCTT	2 cut(s)	805, 837
FaqI	GGGAC	2 cut(s)	128, 475
Fnu4HI	GCNGC	3 cut(s)	653, 1002, 1131
FokI	GGATG	5 cut(s)	748, 861, 897, 943, 1269
FriOI	GRGCYC	2 cut(s)	44, 405
Fsp4HI	GCNGC	3 cut(s)	653, 1002, 1131
FspAI	RTGCGCAY	1 cut(s)	504
FspBI	CTAG	1 cut(s)	758
FspI	TGCGCA	1 cut(s)	504
GlaI	GCGC	1 cut(s)	504
GluI	GCNGC	3 cut(s)	653, 1002, 1131
GsuI	CTGGAG	1 cut(s)	1293
HaeIII	GGCC	5 cut(s)	42, 557, 720, 730, 853
HhaI	GCGC	1 cut(s)	505
Hin6I	GCGC	1 cut(s)	503
HinP1I	GCGC	1 cut(s)	503
HincII	GTYRAC	1 cut(s)	146
HindII	GTYRAC	1 cut(s)	146
HinfI	GANTC	5 cut(s)	20, 96, 677, 1108, 1277
HphI	GGTGA	2 cut(s)	207, 817
Hpy166II	GTNNAC	4 cut(s)	146, 763, 952, 1228
Hpy188I	TCNGA	4 cut(s)	250, 327, 785, 1170
Hpy188III	TCNNGA	6 cut(s)	93, 494, 519, 868, 943, 1148
Hpy8I	GTNNAC	4 cut(s)	146, 763, 952, 1228
Hpy99I	CGWCG	1 cut(s)	178
HpyAV	CCTTC	2 cut(s)	131, 332
HpyCH4III	ACNGT	4 cut(s)	150, 178, 1027, 1216
HpyCH4IV	ACGT	4 cut(s)	142, 779, 1224, 1248
HpyCH4V	TGCA	9 cut(s)	9, 17, 182, 206, 395, 467, 617, 952, 986
HpyF10VI	GCNNNNNNNGC	2 cut(s)	598, 1007
HpyF3I	CTNAG	2 cut(s)	228, 1005
HpySE526I	ACGT	4 cut(s)	142, 779, 1224, 1248
HspAI	GCGC	1 cut(s)	503
Kzo9I	GATC	1 cut(s)	604
LmnI	GCTCC	1 cut(s)	1237
Lsp1109I	GCAGC	2 cut(s)	664, 988
LweI	GCATC	3 cut(s)	144, 894, 1299
MaeI	CTAG	1 cut(s)	758
MaeII	ACGT	4 cut(s)	142, 779, 1224, 1248
MaeIII	GTNAC	2 cut(s)	295, 469
MalI	GATC	1 cut(s)	606
MbiI	CCGCTC	1 cut(s)	1130
MboI	GATC	1 cut(s)	604
MboII	GAAGA	7 cut(s)	81, 204, 548, 680, 787, 820, 1213
MhlI	GDGCHC	3 cut(s)	44, 405, 954
MlsI	TGGCCA	1 cut(s)	853
MluCI	AATT	8 cut(s)	57, 72, 166, 242, 270, 527, 1186, 1243
MluNI	TGGCCA	1 cut(s)	853
MlyI	GAGTC	1 cut(s)	1286
MmeI	TCCRAC	1 cut(s)	526
MnlI	CCTC	8 cut(s)	41, 450, 631, 696, 975, 1053, 1070, 1168
Mox20I	TGGCCA	1 cut(s)	853
Mph1103I	ATGCAT	1 cut(s)	397
MroXI	GAANNNNTTC	1 cut(s)	779
MscI	TGGCCA	1 cut(s)	853
MseI	TTAA	4 cut(s)	155, 597, 1017, 1299
MslI	CAYNNNNRTG	2 cut(s)	498, 947
Msp20I	TGGCCA	1 cut(s)	853
MspR9I	CCNGG	4 cut(s)	698, 733, 1105, 1272
Mva1269I	GAATGC	2 cut(s)	395, 1003
MvaI	CCWGG	4 cut(s)	698, 733, 1105, 1272
MwoI	GCNNNNNNNGC	2 cut(s)	598, 1007
NcoI	CCATGG	2 cut(s)	425, 587
NdeII	GATC	1 cut(s)	604
NlaIV	GGNNCC	4 cut(s)	42, 43, 79, 963
NsbI	TGCGCA	1 cut(s)	504
NsiI	ATGCAT	1 cut(s)	397
NspI	RCATGY	2 cut(s)	311, 631
NspV	TTCGAA	1 cut(s)	61
OliI	CACNNNNGTG	1 cut(s)	947
PagI	TCATGA	1 cut(s)	493
PciI	ACATGT	1 cut(s)	627
PctI	GAATGC	2 cut(s)	395, 1003
PdmI	GAANNNNTTC	1 cut(s)	779
PfeI	GAWTC	4 cut(s)	20, 96, 677, 1108
PkrI	GCNGC	3 cut(s)	654, 1003, 1132
PleI	GAGTC	1 cut(s)	1285
PpsI	GAGTC	1 cut(s)	1285
PscI	ACATGT	1 cut(s)	627
PsiI	TTATAA	1 cut(s)	1119
Psp6I	CCWGG	4 cut(s)	696, 731, 1103, 1270
PspGI	CCWGG	4 cut(s)	696, 731, 1103, 1270
PspN4I	GGNNCC	4 cut(s)	42, 43, 79, 963
PspOMI	GGGCCC	1 cut(s)	40
PspPI	GGNCC	4 cut(s)	40, 41, 719, 729
PstI	CTGCAG	2 cut(s)	469, 988
PstNI	CAGNNNCTG	2 cut(s)	464, 473
RsaI	GTAC	1 cut(s)	937
RsaNI	GTAC	1 cut(s)	936
RseI	CAYNNNNRTG	2 cut(s)	498, 947
SaqAI	TTAA	4 cut(s)	155, 597, 1017, 1299
SatI	GCNGC	3 cut(s)	653, 1002, 1131
Sau3AI	GATC	1 cut(s)	604
Sau96I	GGNCC	4 cut(s)	40, 41, 719, 729
SchI	GAGTC	1 cut(s)	1286
ScrFI	CCNGG	4 cut(s)	698, 733, 1105, 1272
SduI	GDGCHC	3 cut(s)	44, 405, 954
SfaNI	GCATC	3 cut(s)	144, 894, 1299
SfcI	CTRYAG	2 cut(s)	465, 984
SfuI	TTCGAA	1 cut(s)	61
SmiMI	CAYNNNNRTG	2 cut(s)	498, 947
SmlI	CTYRAG	1 cut(s)	517
SmoI	CTYRAG	1 cut(s)	517
Sse9I	AATT	8 cut(s)	57, 72, 166, 242, 270, 527, 1186, 1243
SsiI	CCGC	3 cut(s)	188, 592, 1130
SspMI	CTAG	1 cut(s)	758
StyD4I	CCNGG	4 cut(s)	696, 731, 1103, 1270
StyI	CCWWGG	3 cut(s)	36, 425, 587
TaaI	ACNGT	4 cut(s)	150, 178, 1027, 1216
TaiI	ACGT	4 cut(s)	145, 782, 1227, 1251
TaqI	TCGA	3 cut(s)	61, 607, 768
TasI	AATT	8 cut(s)	57, 72, 166, 242, 270, 527, 1186, 1243
TatI	WGTACW	1 cut(s)	935
TauI	GCSGC	1 cut(s)	1133
TfiI	GAWTC	4 cut(s)	20, 96, 677, 1108
Tru1I	TTAA	4 cut(s)	155, 597, 1017, 1299
Tru9I	TTAA	4 cut(s)	155, 597, 1017, 1299
TscAI	CASTG	2 cut(s)	558, 1221
TseI	GCWGC	2 cut(s)	652, 1001
TspDTI	ATGAA	3 cut(s)	669, 1019, 1214
TspRI	CASTG	2 cut(s)	558, 1221
VneI	GTGCAC	1 cut(s)	950
XceI	RCATGY	2 cut(s)	311, 631
XcmI	CCANNNNNNNNNTGG	3 cut(s)	585, 729, 1268
XmnI	GAANNNNTTC	1 cut(s)	779
XspI	CTAG	1 cut(s)	758
Zsp2I	ATGCAT	1 cut(s)	397

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.