Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0012527

Physical Location & Seq

Genomic Coordinates Reverse (-)

21791896 .. 21794747

Gene Structure 2852 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G262500.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1092 bp

ATGCAGCCGCTGCTGGAGTCAGGGAGGAGAATGGAGGAGGAACCATCAAATCTCCCAGTTTCGTTATGGGGCCGGGTTTCTGCCTTTGAGGCGAGGGCTAGGGAAGCATACAAAAGAAAGCCAATCTCACATTGGATTCTTCTTGTTCTAAGCAGTGCGGCAATGCTCGTAGCGTTCCCTGCATCAAGCCTTCTGTCTCGTGTCTATTATGCCAATGGTGGCACTAGCAAGTGGATCATTTCATGGGTGGCAGTTGCAGGGTGGCCTCTGACTGCTTTGATCTTGTTCCCTACATACTTGGTCTGCAAAACCTCTCCTACTCCCCTCACTTTAAAACTTACTTTTTCTTATATTGTGCTTGGTCTCTTAAGTGCTGCTGACAACCTCATGTATGCTTATGCATATGCTTACCTCCCAGCATCTACTGCTTCTCTTCTCGCATCATCATCTCTAGTATTTTCTGCATTGTTTGGATATCTACTTGTGAAGAACAAGCTAAACGCCGCAATAGTAAACGCTGTTGTTGTCATTACTGCTGCTATGACCATCATTGCTTTGGATTCAGATTCAGACAGATATGGAAATGTCACTGATAAGCAATACATTTGGGGTTTTATATGGGATATTTTAGGGTCTGCTCTCCACGGACTCATATTTGCTCTTTCGGAGCTAGTTTTCGTGAAGCTAGTTGGTAGAAGGTCCTTCCATGTTGTGTTGGAGCAGCAAGTGATGGTCTCTTTGTTTGCGTTTGTATTTACCACGATTGGAGTAATTGTGAACAACGATTTTCAGAGAATGAAATATGAGGCCAGAAGTTTCGAGGGTGGTAAATCTTCTTATTACCTTGTTCTCATTTGGAGCACCATCAGTTTCCAGTTGGGGGTATTAGGGAGTGTTGCTGTGCTTTTTTTGTCGTCCACTGTTCTTGCGGGTGTCCTGAATGCAATAAGGGTACCCCTCACAAGCATTGCGGCGGTCATTTTGTTAAAAGACCCAATGAGCGGCTTGAAGATCCTCTCTCTGGTCGTCACATTTTGGGGCTTTGGCTGCTACATCTATGGCAGTTCCTCGTCAAGTAAAGATTCCTCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005345 GO:0005575 GO:0006810 GO:0006863 GO:0008150 GO:0015205 GO:0015851 GO:0016020 GO:0022857 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0072530 GO:1904823

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PUNUT

Protein Analysis

364

Amino Acids

39.67

Weight (kDa)

9.34

Isoelectric Point (pI)

37.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012527)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G24220 AT2G24220
fragaria_vesca	FvH4_1g00971 FvH4_1g00971
malus_domestica	MD15G1152200.v1.1
prunus_persica	Prupe.7G262500_v2.0.a1 Prupe.7G262500_v2.0.a1 Prupe.7G262500_v2.0.a1 Prupe.7G262500_v2.0.a1
pyrus_communis	pycom15g13680
rosa_chinensis	RchiOBHm_Chr2g0085711
rosa_multiflora	Rmu_co8380643.1_g000001
rosa_roxburghii	Rroxscaffold_2G00155100
rosa_rugosa	Rorug01G0462800
rosa_samantha	Rh2AG011700 Rh2BG012300 Rh2CG013100 Rh2DG014200
rosa_wichuraiana	Rw2G001040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	952
AccB1I	GGYRCC	1 cut(s)	952
AccBSI	CCGCTC	1 cut(s)	1002
AciI	CCGC	7 cut(s)	8, 158, 504, 929, 971, 974, 1002
AclWI	GGATC	2 cut(s)	242, 1006
AfaI	GTAC	1 cut(s)	954
AfiI	CCNNNNNNNGG	3 cut(s)	880, 1001, 1021
AflII	CTTAAG	1 cut(s)	367
AgsI	TTSAA	1 cut(s)	1009
AluBI	AGCT	3 cut(s)	496, 670, 685
AluI	AGCT	3 cut(s)	496, 670, 685
Alw21I	GWGCWC	1 cut(s)	863
Alw26I	GTCTC	3 cut(s)	201, 368, 739
AlwI	GGATC	2 cut(s)	242, 1006
AlwNI	CAGNNNCTG	1 cut(s)	10
AoxI	GGCC	3 cut(s)	70, 263, 807
ApeKI	GCWGC	6 cut(s)	4, 10, 374, 536, 721, 1047
Asp718I	GGTACC	1 cut(s)	952
AspS9I	GGNCC	2 cut(s)	70, 699
AsuC2I	CCSGG	1 cut(s)	74
AvaII	GGWCC	1 cut(s)	699
BanI	GGYRCC	1 cut(s)	952
BauI	CACGAG	2 cut(s)	198, 1087
Bbv12I	GWGCWC	1 cut(s)	863
BbvI	GCAGC	5 cut(s)	16, 361, 523, 733, 1034
BccI	CCATC	4 cut(s)	52, 554, 724, 872
BcnI	CCSGG	1 cut(s)	74
BcoDI	GTCTC	3 cut(s)	201, 368, 739
BfaI	CTAG	5 cut(s)	99, 225, 452, 671, 686
BfrI	CTTAAG	1 cut(s)	367
BglI	GCCNNNNNGGC	1 cut(s)	89
Bme1390I	CCNGG	1 cut(s)	74
Bme18I	GGWCC	1 cut(s)	699
BmgT120I	GGNCC	2 cut(s)	70, 699
BmiI	GGNNCC	3 cut(s)	42, 71, 954
BmrFI	CCNGG	1 cut(s)	74
BmrI	ACTGGG	1 cut(s)	50
BmsI	GCATC	3 cut(s)	191, 428, 449
BmuI	ACTGGG	1 cut(s)	50
BpmI	CTGGAG	1 cut(s)	35
BpuMI	CCSGG	1 cut(s)	74
BsaI	GGTCTC	2 cut(s)	368, 739
BsaJI	CCNNGG	1 cut(s)	643
BsaXI	ACNNNNNCTCC	2 cut(s)	759, 789
Bsc4I	CCNNNNNNNGG	3 cut(s)	880, 1001, 1021
Bse1I	ACTGG	2 cut(s)	56, 874
Bse3DI	GCAATG	3 cut(s)	168, 549, 966
BseDI	CCNNGG	1 cut(s)	643
BseLI	CCNNNNNNNGG	3 cut(s)	880, 1001, 1021
BseMI	GCAATG	3 cut(s)	168, 549, 966
BseNI	ACTGG	2 cut(s)	56, 874
BseRI	GAGGAG	2 cut(s)	40, 50
BseXI	GCAGC	5 cut(s)	16, 361, 523, 733, 1034
BseYI	CCCAGC	1 cut(s)	415
BshFI	GGCC	3 cut(s)	72, 265, 809
BshNI	GGYRCC	1 cut(s)	952
BsiHKAI	GWGCWC	1 cut(s)	863
BsiSI	CCGG	1 cut(s)	73
BslI	CCNNNNNNNGG	3 cut(s)	880, 1001, 1021
BsmAI	GTCTC	3 cut(s)	201, 368, 739
BsmI	GAATGC	1 cut(s)	946
BsnI	GGCC	3 cut(s)	72, 265, 809
Bso31I	GGTCTC	2 cut(s)	368, 739
Bsp1286I	GDGCHC	1 cut(s)	863
Bsp143I	GATC	3 cut(s)	234, 279, 1011
BspACI	CCGC	7 cut(s)	8, 158, 504, 929, 971, 974, 1002
BspANI	GGCC	3 cut(s)	72, 265, 809
BspLI	GGNNCC	3 cut(s)	42, 71, 954
BspPI	GGATC	2 cut(s)	242, 1006
BspT107I	GGYRCC	1 cut(s)	952
BspTI	CTTAAG	1 cut(s)	367
BspTNI	GGTCTC	2 cut(s)	368, 739
BsrBI	CCGCTC	1 cut(s)	1002
BsrDI	GCAATG	3 cut(s)	168, 549, 966
BsrI	ACTGG	2 cut(s)	56, 874
BssECI	CCNNGG	1 cut(s)	643
BssMI	GATC	3 cut(s)	234, 279, 1011
BssSI	CACGAG	2 cut(s)	198, 1087
Bst2BI	CACGAG	2 cut(s)	198, 1087
Bst4CI	ACNGT	1 cut(s)	922
Bst6I	CTCTTC	1 cut(s)	438
BstAFI	CTTAAG	1 cut(s)	367
BstAPI	GCANNNNNTGC	2 cut(s)	10, 425
BstDEI	CTNAG	1 cut(s)	149
BstDSI	CCRYGG	1 cut(s)	643
BstKTI	GATC	3 cut(s)	237, 282, 1014
BstMAI	GTCTC	3 cut(s)	201, 368, 739
BstMBI	GATC	3 cut(s)	234, 279, 1011
BstMWI	GCNNNNNNNGC	6 cut(s)	10, 89, 104, 179, 425, 1047
BstSCI	CCNGG	1 cut(s)	72
BstV1I	GCAGC	5 cut(s)	16, 361, 523, 733, 1034
BstX2I	RGATCY	1 cut(s)	1011
BstYI	RGATCY	1 cut(s)	1011
BsuRI	GGCC	3 cut(s)	72, 265, 809
BtgI	CCRYGG	1 cut(s)	643
BtsI	GCAGTG	1 cut(s)	160
BtsIMutI	CAGTG	3 cut(s)	160, 588, 918
CaiI	CAGNNNCTG	1 cut(s)	10
Cfr13I	GGNCC	2 cut(s)	70, 699
Csp6I	GTAC	1 cut(s)	953
CspCI	CAANNNNNGTGG	2 cut(s)	907, 942
CviAII	CATG	3 cut(s)	243, 388, 707
CviQI	GTAC	1 cut(s)	953
DdeI	CTNAG	1 cut(s)	149
DpnI	GATC	3 cut(s)	236, 281, 1013
DpnII	GATC	3 cut(s)	234, 279, 1011
DraI	TTTAAA	1 cut(s)	333
Eam1104I	CTCTTC	1 cut(s)	438
EarI	CTCTTC	1 cut(s)	438
Eco31I	GGTCTC	2 cut(s)	368, 739
Eco32I	GATATC	1 cut(s)	476
Eco47I	GGWCC	1 cut(s)	699
EcoO109I	RGGNCCY	1 cut(s)	699
EcoRV	GATATC	1 cut(s)	476
EcoT22I	ATGCAT	1 cut(s)	403
FaeI	CATG	3 cut(s)	246, 391, 710
FatI	CATG	3 cut(s)	242, 387, 706
FauI	CCCGC	1 cut(s)	922
FauNDI	CATATG	1 cut(s)	403
FspBI	CTAG	5 cut(s)	99, 225, 452, 671, 686
GsaI	CCCAGC	1 cut(s)	419
GsuI	CTGGAG	1 cut(s)	35
HaeIII	GGCC	3 cut(s)	72, 265, 809
HapII	CCGG	1 cut(s)	73
Hin1II	CATG	3 cut(s)	246, 391, 710
HinfI	GANTC	6 cut(s)	17, 136, 560, 566, 648, 1082
HpaII	CCGG	1 cut(s)	73
Hpy166II	GTNNAC	3 cut(s)	514, 778, 918
Hpy188I	TCNGA	5 cut(s)	270, 565, 571, 667, 792
Hpy188III	TCNNGA	3 cut(s)	679, 937, 1089
Hpy8I	GTNNAC	3 cut(s)	514, 778, 918
HpyAV	CCTTC	3 cut(s)	200, 690, 712
HpyCH4III	ACNGT	1 cut(s)	922
HpyCH4V	TGCA	7 cut(s)	4, 182, 257, 306, 401, 464, 944
HpyF10VI	GCNNNNNNNGC	6 cut(s)	10, 89, 104, 179, 425, 1047
HpyF3I	CTNAG	1 cut(s)	149
Hsp92II	CATG	3 cut(s)	246, 391, 710
KpnI	GGTACC	1 cut(s)	956
Kzo9I	GATC	3 cut(s)	234, 279, 1011
LmnI	GCTCC	3 cut(s)	667, 718, 858
Lsp1109I	GCAGC	5 cut(s)	16, 361, 523, 733, 1034
LweI	GCATC	3 cut(s)	191, 428, 449
MaeI	CTAG	5 cut(s)	99, 225, 452, 671, 686
MaeIII	GTNAC	2 cut(s)	586, 1027
MalI	GATC	3 cut(s)	236, 281, 1013
MbiI	CCGCTC	1 cut(s)	1002
MboI	GATC	3 cut(s)	234, 279, 1011
MboII	GAAGA	5 cut(s)	131, 425, 499, 825, 1021
MflI	RGATCY	1 cut(s)	1011
MhlI	GDGCHC	1 cut(s)	863
MluCI	AATT	1 cut(s)	771
MlyI	GAGTC	2 cut(s)	26, 642
MmeI	TCCRAC	1 cut(s)	696
Mph1103I	ATGCAT	1 cut(s)	403
MseI	TTAA	3 cut(s)	332, 368, 986
MspA1I	CMGCKG	1 cut(s)	10
MspCI	CTTAAG	1 cut(s)	367
MspI	CCGG	1 cut(s)	73
MspR9I	CCNGG	1 cut(s)	74
Mva1269I	GAATGC	1 cut(s)	946
MwoI	GCNNNNNNNGC	6 cut(s)	10, 89, 104, 179, 425, 1047
NciI	CCSGG	1 cut(s)	74
NdeI	CATATG	1 cut(s)	403
NdeII	GATC	3 cut(s)	234, 279, 1011
NlaIII	CATG	3 cut(s)	246, 391, 710
NlaIV	GGNNCC	3 cut(s)	42, 71, 954
NmuCI	GTSAC	2 cut(s)	586, 1027
NsiI	ATGCAT	1 cut(s)	403
PctI	GAATGC	1 cut(s)	946
PfeI	GAWTC	4 cut(s)	136, 560, 566, 1082
PleI	GAGTC	2 cut(s)	25, 642
PpsI	GAGTC	2 cut(s)	25, 642
PpuMI	RGGWCCY	1 cut(s)	699
Psp5II	RGGWCCY	1 cut(s)	699
PspFI	CCCAGC	1 cut(s)	415
PspN4I	GGNNCC	3 cut(s)	42, 71, 954
PspPI	GGNCC	2 cut(s)	70, 699
PspPPI	RGGWCCY	1 cut(s)	699
PstNI	CAGNNNCTG	1 cut(s)	10
PsuI	RGATCY	1 cut(s)	1011
RsaI	GTAC	1 cut(s)	954
RsaNI	GTAC	1 cut(s)	953
SaqAI	TTAA	3 cut(s)	332, 368, 986
Sau3AI	GATC	3 cut(s)	234, 279, 1011
Sau96I	GGNCC	2 cut(s)	70, 699
SchI	GAGTC	2 cut(s)	26, 642
ScrFI	CCNGG	1 cut(s)	74
SduI	GDGCHC	1 cut(s)	863
SetI	ASST	8 cut(s)	314, 387, 414, 498, 672, 687, 701, 846
SfaNI	GCATC	3 cut(s)	191, 428, 449
SinI	GGWCC	1 cut(s)	699
SmlI	CTYRAG	1 cut(s)	367
SmoI	CTYRAG	1 cut(s)	367
Sse9I	AATT	1 cut(s)	771
SsiI	CCGC	7 cut(s)	8, 158, 504, 929, 971, 974, 1002
SspMI	CTAG	5 cut(s)	99, 225, 452, 671, 686
StyD4I	CCNGG	1 cut(s)	72
TaaI	ACNGT	1 cut(s)	922
TaqI	TCGA	1 cut(s)	819
TasI	AATT	1 cut(s)	771
TauI	GCSGC	5 cut(s)	10, 161, 506, 974, 1005
TfiI	GAWTC	4 cut(s)	136, 560, 566, 1082
Tru1I	TTAA	3 cut(s)	332, 368, 986
Tru9I	TTAA	3 cut(s)	332, 368, 986
TscAI	CASTG	3 cut(s)	160, 595, 925
TseFI	GTSAC	2 cut(s)	586, 1027
TseI	GCWGC	6 cut(s)	4, 10, 374, 536, 721, 1047
Tsp45I	GTSAC	2 cut(s)	586, 1027
TspDTI	ATGAA	2 cut(s)	231, 812
TspGWI	ACGGA	1 cut(s)	660
TspRI	CASTG	3 cut(s)	160, 595, 925
Vha464I	CTTAAG	1 cut(s)	367
VpaK11BI	GGWCC	1 cut(s)	699
XcmI	CCANNNNNNNNNTGG	3 cut(s)	63, 129, 553
XspI	CTAG	5 cut(s)	99, 225, 452, 671, 686
Zsp2I	ATGCAT	1 cut(s)	403

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.