26S proteasome non-ATPase regulatory subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G57950 AT5G57950 |
| fragaria_vesca | FvH4_1g00940 FvH4_1g00940 FvH4_1g00940 |
| malus_domestica | MD02G1007700.v1.1 MD09G1175000.v1.1 |
| prunus_persica | Prupe.7G262800_v2.0.a1 |
| pyrus_communis | pycom02g00660 pycom15g13650 |
| rosa_chinensis | RchiOBHm_Chr2g0085671 |
| rosa_laevigata | RLG00000015710 |
| rosa_multiflora | Rmu_co8318769.1_g000001 Rmu_sc0007631.1_g000007 |
| rosa_roxburghii | Rroxscaffold_2G00155140 |
| rosa_rugosa | Rorug01G0462100 |
| rosa_samantha | Rh2AG011300 Rh2BG011800 Rh2CG012600 |
| rosa_wichuraiana | Rw2G001000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 182 |
| AccI | GTMKAC | 1 cut(s) | 330 |
| AccIII | TCCGGA | 1 cut(s) | 660 |
| AciI | CCGC | 3 cut(s) | 23, 65, 182 |
| AclWI | GGATC | 2 cut(s) | 658, 671 |
| AcsI | RAATTY | 1 cut(s) | 491 |
| AcyI | GRCGYC | 1 cut(s) | 190 |
| AfaI | GTAC | 1 cut(s) | 411 |
| AjiI | CACGTC | 1 cut(s) | 397 |
| AjnI | CCWGG | 1 cut(s) | 109 |
| AluBI | AGCT | 2 cut(s) | 437, 472 |
| AluI | AGCT | 2 cut(s) | 437, 472 |
| Alw21I | GWGCWC | 2 cut(s) | 58, 598 |
| Alw26I | GTCTC | 1 cut(s) | 523 |
| AlwI | GGATC | 2 cut(s) | 658, 671 |
| Aor13HI | TCCGGA | 1 cut(s) | 660 |
| AoxI | GGCC | 2 cut(s) | 106, 559 |
| ApeKI | GCWGC | 1 cut(s) | 523 |
| ApoI | RAATTY | 1 cut(s) | 491 |
| AspLEI | GCGC | 2 cut(s) | 320, 547 |
| AspS9I | GGNCC | 2 cut(s) | 107, 559 |
| AsuC2I | CCSGG | 1 cut(s) | 102 |
| AsuHPI | GGTGA | 2 cut(s) | 524, 625 |
| BamHI | GGATCC | 1 cut(s) | 663 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 450, 482 |
| Bbv12I | GWGCWC | 2 cut(s) | 58, 598 |
| BbvI | GCAGC | 1 cut(s) | 510 |
| BccI | CCATC | 3 cut(s) | 25, 34, 455 |
| BceAI | ACGGC | 1 cut(s) | 62 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 320, 354 |
| BciT130I | CCWGG | 1 cut(s) | 111 |
| BciVI | GTATCC | 1 cut(s) | 561 |
| BclI | TGATCA | 1 cut(s) | 214 |
| BcnI | CCSGG | 1 cut(s) | 102 |
| BcoDI | GTCTC | 1 cut(s) | 523 |
| BfaI | CTAG | 2 cut(s) | 59, 621 |
| BfmI | CTRYAG | 1 cut(s) | 524 |
| BfuI | GTATCC | 1 cut(s) | 561 |
| BisI | GCNGC | 1 cut(s) | 524 |
| BlsI | GCNGC | 1 cut(s) | 525 |
| Bme1390I | CCNGG | 2 cut(s) | 102, 111 |
| BmgBI | CACGTC | 1 cut(s) | 397 |
| BmgT120I | GGNCC | 2 cut(s) | 107, 559 |
| BmiI | GGNNCC | 1 cut(s) | 665 |
| BmrFI | CCNGG | 2 cut(s) | 102, 111 |
| BmsI | GCATC | 5 cut(s) | 298, 329, 356, 430, 452 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 40, 72 |
| BpuEI | CTTGAG | 1 cut(s) | 582 |
| BpuMI | CCSGG | 1 cut(s) | 102 |
| BsaHI | GRCGYC | 1 cut(s) | 190 |
| BsaJI | CCNNGG | 4 cut(s) | 109, 138, 384, 562 |
| BsaWI | WCCGGW | 1 cut(s) | 660 |
| Bse3DI | GCAATG | 1 cut(s) | 505 |
| BseAI | TCCGGA | 1 cut(s) | 660 |
| BseBI | CCWGG | 1 cut(s) | 111 |
| BseDI | CCNNGG | 4 cut(s) | 109, 138, 384, 562 |
| BseGI | GGATG | 4 cut(s) | 165, 290, 347, 394 |
| BseMI | GCAATG | 1 cut(s) | 505 |
| BseMII | CTCAG | 3 cut(s) | 279, 310, 531 |
| BseRI | GAGGAG | 1 cut(s) | 64 |
| BseXI | GCAGC | 1 cut(s) | 510 |
| BseYI | CCCAGC | 1 cut(s) | 646 |
| BsgI | GTGCAG | 1 cut(s) | 245 |
| BshFI | GGCC | 2 cut(s) | 108, 561 |
| BsiHKAI | GWGCWC | 2 cut(s) | 58, 598 |
| BsiSI | CCGG | 3 cut(s) | 102, 120, 661 |
| BslFI | GGGAC | 1 cut(s) | 22 |
| BsmAI | GTCTC | 1 cut(s) | 523 |
| BsmFI | GGGAC | 1 cut(s) | 22 |
| BsmI | GAATGC | 1 cut(s) | 79 |
| BsnI | GGCC | 2 cut(s) | 108, 561 |
| Bsp1286I | GDGCHC | 2 cut(s) | 58, 598 |
| Bsp13I | TCCGGA | 1 cut(s) | 660 |
| Bsp143I | GATC | 3 cut(s) | 214, 478, 663 |
| Bsp19I | CCATGG | 2 cut(s) | 384, 562 |
| BspACI | CCGC | 3 cut(s) | 23, 65, 182 |
| BspANI | GGCC | 2 cut(s) | 108, 561 |
| BspCNI | CTCAG | 3 cut(s) | 278, 309, 532 |
| BspEI | TCCGGA | 1 cut(s) | 660 |
| BspLI | GGNNCC | 1 cut(s) | 665 |
| BspMAI | CTGCAG | 1 cut(s) | 528 |
| BspPI | GGATC | 2 cut(s) | 658, 671 |
| BsrBI | CCGCTC | 1 cut(s) | 182 |
| BsrDI | GCAATG | 1 cut(s) | 505 |
| BssECI | CCNNGG | 4 cut(s) | 109, 138, 384, 562 |
| BssMI | GATC | 3 cut(s) | 214, 478, 663 |
| BssNI | GRCGYC | 1 cut(s) | 190 |
| BssT1I | CCWWGG | 2 cut(s) | 384, 562 |
| Bst2UI | CCWGG | 1 cut(s) | 111 |
| Bst4CI | ACNGT | 2 cut(s) | 175, 613 |
| Bst6I | CTCTTC | 1 cut(s) | 41 |
| BstACI | GRCGYC | 1 cut(s) | 190 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 275 |
| BstC8I | GCNNGC | 3 cut(s) | 180, 276, 450 |
| BstDEI | CTNAG | 3 cut(s) | 265, 296, 540 |
| BstDSI | CCRYGG | 2 cut(s) | 384, 562 |
| BstF5I | GGATG | 4 cut(s) | 165, 290, 347, 394 |
| BstHHI | GCGC | 2 cut(s) | 320, 547 |
| BstKTI | GATC | 3 cut(s) | 217, 481, 666 |
| BstMAI | GTCTC | 1 cut(s) | 523 |
| BstMBI | GATC | 3 cut(s) | 214, 478, 663 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 62, 275, 317, 449, 542 |
| BstNI | CCWGG | 1 cut(s) | 111 |
| BstSCI | CCNGG | 2 cut(s) | 100, 109 |
| BstSFI | CTRYAG | 1 cut(s) | 524 |
| BstV1I | GCAGC | 1 cut(s) | 510 |
| BstX2I | RGATCY | 1 cut(s) | 663 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 385, 391 |
| BstYI | RGATCY | 1 cut(s) | 663 |
| BsuI | GTATCC | 1 cut(s) | 561 |
| BsuRI | GGCC | 2 cut(s) | 108, 561 |
| BtgI | CCRYGG | 2 cut(s) | 384, 562 |
| BtgZI | GCGATG | 1 cut(s) | 429 |
| BtrI | CACGTC | 1 cut(s) | 397 |
| BtsCI | GGATG | 4 cut(s) | 165, 290, 347, 394 |
| Cac8I | GCNNGC | 3 cut(s) | 180, 276, 450 |
| CfoI | GCGC | 2 cut(s) | 320, 547 |
| Cfr13I | GGNCC | 2 cut(s) | 107, 559 |
| CseI | GACGC | 1 cut(s) | 179 |
| Csp6I | GTAC | 1 cut(s) | 410 |
| CviAII | CATG | 3 cut(s) | 385, 563, 627 |
| CviJI | RGCY | 5 cut(s) | 108, 274, 437, 472, 561 |
| CviKI_1 | RGCY | 5 cut(s) | 108, 274, 437, 472, 561 |
| CviQI | GTAC | 1 cut(s) | 410 |
| DdeI | CTNAG | 3 cut(s) | 265, 296, 540 |
| DpnI | GATC | 3 cut(s) | 216, 480, 665 |
| DpnII | GATC | 3 cut(s) | 214, 478, 663 |
| Eam1104I | CTCTTC | 1 cut(s) | 41 |
| EarI | CTCTTC | 1 cut(s) | 41 |
| EciI | GGCGGA | 1 cut(s) | 80 |
| Eco130I | CCWWGG | 2 cut(s) | 384, 562 |
| EcoRII | CCWGG | 1 cut(s) | 109 |
| EcoT14I | CCWWGG | 2 cut(s) | 384, 562 |
| EcoT22I | ATGCAT | 1 cut(s) | 445 |
| ErhI | CCWWGG | 2 cut(s) | 384, 562 |
| FaeI | CATG | 3 cut(s) | 388, 566, 630 |
| FaiI | YATR | 5 cut(s) | 251, 366, 386, 564, 628 |
| FaqI | GGGAC | 1 cut(s) | 22 |
| FatI | CATG | 3 cut(s) | 384, 562, 626 |
| FbaI | TGATCA | 1 cut(s) | 214 |
| FblI | GTMKAC | 1 cut(s) | 330 |
| Fnu4HI | GCNGC | 1 cut(s) | 524 |
| FokI | GGATG | 4 cut(s) | 152, 277, 334, 401 |
| Fsp4HI | GCNGC | 1 cut(s) | 524 |
| FspBI | CTAG | 2 cut(s) | 59, 621 |
| GlaI | GCGC | 2 cut(s) | 319, 546 |
| GluI | GCNGC | 1 cut(s) | 524 |
| GsaI | CCCAGC | 1 cut(s) | 650 |
| HaeIII | GGCC | 2 cut(s) | 108, 561 |
| HapII | CCGG | 3 cut(s) | 102, 120, 661 |
| HgaI | GACGC | 1 cut(s) | 179 |
| HhaI | GCGC | 2 cut(s) | 320, 547 |
| Hin1I | GRCGYC | 1 cut(s) | 190 |
| Hin1II | CATG | 3 cut(s) | 388, 566, 630 |
| Hin6I | GCGC | 2 cut(s) | 318, 545 |
| HinP1I | GCGC | 2 cut(s) | 318, 545 |
| HincII | GTYRAC | 2 cut(s) | 331, 604 |
| HindII | GTYRAC | 2 cut(s) | 331, 604 |
| HinfI | GANTC | 7 cut(s) | 13, 26, 88, 114, 134, 302, 371 |
| HpaII | CCGG | 3 cut(s) | 102, 120, 661 |
| HphI | GGTGA | 2 cut(s) | 524, 625 |
| Hpy166II | GTNNAC | 4 cut(s) | 331, 394, 467, 604 |
| Hpy188I | TCNGA | 7 cut(s) | 18, 39, 139, 299, 307, 483, 541 |
| Hpy188III | TCNNGA | 4 cut(s) | 59, 85, 155, 661 |
| Hpy8I | GTNNAC | 4 cut(s) | 331, 394, 467, 604 |
| Hpy99I | CGWCG | 2 cut(s) | 195, 335 |
| HpyAV | CCTTC | 1 cut(s) | 626 |
| HpyCH4III | ACNGT | 2 cut(s) | 175, 613 |
| HpyCH4IV | ACGT | 2 cut(s) | 333, 396 |
| HpyCH4V | TGCA | 4 cut(s) | 262, 347, 443, 526 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 62, 275, 317, 449, 542 |
| HpyF3I | CTNAG | 3 cut(s) | 265, 296, 540 |
| HpySE526I | ACGT | 2 cut(s) | 333, 396 |
| Hsp92I | GRCGYC | 1 cut(s) | 190 |
| Hsp92II | CATG | 3 cut(s) | 388, 566, 630 |
| HspAI | GCGC | 2 cut(s) | 318, 545 |
| Kpn2I | TCCGGA | 1 cut(s) | 660 |
| Ksp22I | TGATCA | 1 cut(s) | 214 |
| Kzo9I | GATC | 3 cut(s) | 214, 478, 663 |
| LmnI | GCTCC | 1 cut(s) | 283 |
| Lsp1109I | GCAGC | 1 cut(s) | 510 |
| LweI | GCATC | 5 cut(s) | 298, 329, 356, 430, 452 |
| MaeI | CTAG | 2 cut(s) | 59, 621 |
| MaeII | ACGT | 2 cut(s) | 333, 396 |
| MaeIII | GTNAC | 2 cut(s) | 152, 613 |
| MalI | GATC | 3 cut(s) | 216, 480, 665 |
| MbiI | CCGCTC | 1 cut(s) | 182 |
| MboI | GATC | 3 cut(s) | 214, 478, 663 |
| MboII | GAAGA | 2 cut(s) | 58, 470 |
| MflI | RGATCY | 1 cut(s) | 663 |
| MhlI | GDGCHC | 2 cut(s) | 58, 598 |
| MluCI | AATT | 4 cut(s) | 203, 491, 507, 517 |
| MlyI | GAGTC | 3 cut(s) | 35, 97, 128 |
| MnlI | CCTC | 7 cut(s) | 42, 55, 133, 137, 305, 361, 535 |
| Mph1103I | ATGCAT | 1 cut(s) | 445 |
| MroI | TCCGGA | 1 cut(s) | 660 |
| MseI | TTAA | 2 cut(s) | 489, 608 |
| MslI | CAYNNNNRTG | 1 cut(s) | 389 |
| MspI | CCGG | 3 cut(s) | 102, 120, 661 |
| MspR9I | CCNGG | 2 cut(s) | 102, 111 |
| Mva1269I | GAATGC | 1 cut(s) | 79 |
| MvaI | CCWGG | 1 cut(s) | 111 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 62, 275, 317, 449, 542 |
| NciI | CCSGG | 1 cut(s) | 102 |
| NcoI | CCATGG | 2 cut(s) | 384, 562 |
| NdeII | GATC | 3 cut(s) | 214, 478, 663 |
| NlaIII | CATG | 3 cut(s) | 388, 566, 630 |
| NlaIV | GGNNCC | 1 cut(s) | 665 |
| NmuCI | GTSAC | 2 cut(s) | 152, 613 |
| NsiI | ATGCAT | 1 cut(s) | 445 |
| PctI | GAATGC | 1 cut(s) | 79 |
| PfeI | GAWTC | 4 cut(s) | 13, 114, 302, 371 |
| PkrI | GCNGC | 1 cut(s) | 525 |
| PleI | GAGTC | 3 cut(s) | 34, 96, 128 |
| PpsI | GAGTC | 3 cut(s) | 34, 96, 128 |
| Psp6I | CCWGG | 1 cut(s) | 109 |
| PspFI | CCCAGC | 1 cut(s) | 646 |
| PspGI | CCWGG | 1 cut(s) | 109 |
| PspN4I | GGNNCC | 1 cut(s) | 665 |
| PspPI | GGNCC | 2 cut(s) | 107, 559 |
| PstI | CTGCAG | 1 cut(s) | 528 |
| PsuI | RGATCY | 1 cut(s) | 663 |
| RsaI | GTAC | 1 cut(s) | 411 |
| RsaNI | GTAC | 1 cut(s) | 410 |
| RseI | CAYNNNNRTG | 1 cut(s) | 389 |
| SalI | GTCGAC | 1 cut(s) | 329 |
| SaqAI | TTAA | 2 cut(s) | 489, 608 |
| SatI | GCNGC | 1 cut(s) | 524 |
| Sau3AI | GATC | 3 cut(s) | 214, 478, 663 |
| Sau96I | GGNCC | 2 cut(s) | 107, 559 |
| SchI | GAGTC | 3 cut(s) | 35, 97, 128 |
| ScrFI | CCNGG | 2 cut(s) | 102, 111 |
| SduI | GDGCHC | 2 cut(s) | 58, 598 |
| SetI | ASST | 8 cut(s) | 129, 336, 399, 439, 474, 574, 595, 622 |
| SfaNI | GCATC | 5 cut(s) | 298, 329, 356, 430, 452 |
| SfcI | CTRYAG | 1 cut(s) | 524 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 389 |
| SmlI | CTYRAG | 1 cut(s) | 597 |
| SmoI | CTYRAG | 1 cut(s) | 597 |
| Sse9I | AATT | 4 cut(s) | 203, 491, 507, 517 |
| SsiI | CCGC | 3 cut(s) | 23, 65, 182 |
| SspMI | CTAG | 2 cut(s) | 59, 621 |
| StyD4I | CCNGG | 2 cut(s) | 100, 109 |
| StyI | CCWWGG | 2 cut(s) | 384, 562 |
| TaaI | ACNGT | 2 cut(s) | 175, 613 |
| TaiI | ACGT | 2 cut(s) | 336, 399 |
| TaqI | TCGA | 3 cut(s) | 29, 84, 330 |
| TasI | AATT | 4 cut(s) | 203, 491, 507, 517 |
| TfiI | GAWTC | 4 cut(s) | 13, 114, 302, 371 |
| Tru1I | TTAA | 2 cut(s) | 489, 608 |
| Tru9I | TTAA | 2 cut(s) | 489, 608 |
| TseFI | GTSAC | 2 cut(s) | 152, 613 |
| TseI | GCWGC | 1 cut(s) | 523 |
| Tsp45I | GTSAC | 2 cut(s) | 152, 613 |
| TspDTI | ATGAA | 2 cut(s) | 86, 353 |
| XapI | RAATTY | 1 cut(s) | 491 |
| XbaI | TCTAGA | 1 cut(s) | 58 |
| XmiI | GTMKAC | 1 cut(s) | 330 |
| XspI | CTAG | 2 cut(s) | 59, 621 |
| Zsp2I | ATGCAT | 1 cut(s) | 445 |