Prupe.8G013200_v2.0.a1

Chaperone protein DNAj

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0015483
Physical Location & Seq
Reverse (-)
1098549 .. 1104366
5818 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G013200.1

Sequence Viewer

Length: 1155 bp
ATGGTGAAGGAAACTGAGTTCTATGATGTCCTCAGCGTCAGTCCCTCAGCTTCTGAGGAAGAAATTCGCAAGGCTTATTATATTAAGGCAAGGCAAGTTCATCCGGACAAAAATCCAAATGATCCTCAGGCTGCTGAAAGATTTCAGGTACTAGGTGAAGCTTATCAAGTTTTGAGTGATCCAGTGCAAAGAGATGCATATGATCGAAATGGAAAGTATTGCATATCTAGGGAAACCATGCTTGACCCCACAGCTGTCTTTGCTTTTCTTTTCGGAAGTGAATTATTTGAGGACTACATAGGACATCTAGCTGTAGCATCAATGGCCTCTTCTCAATTAGCTGGTGAAGGTGACAGCCCTGAAAAAGTGCATGATAAATTGAAGGCTGTCCAGAAAGAAAGAGAAGAAAAGCTAGCAAAATCACTCAAGGATTTTCTTAAACAATATGTTCAAGGTGACAAAGAGGGATTCTTACAGCATGCTGAATCTGAAGCTGGACGACTTTCTGATGCAGCCTTTGGAATTGAAATGCTACACACTATTGGCTACGTATATTCGAGACAAGCAGCACAAGAGCTTGGAAAGAAAACCATATTCCTAGGAGTACCATTTTTGGCTGAGTGGGTACGGAATAAGGGACATTTCTGGAAGTCACAGATGACTGCTGCAAAAGGTGCTTTTCAGTTGCTCCAACTTCAAGAAGAAATCCGTCGGCAATTTAAAATGGATGGAAGCGGCCCTGAAAATGATGTTGAATCACATATACGCTTAAACAAAGACACACTTTTGAACTCATTGTGGAAATTGAATGTGGTGGACATTGAAGTAACTCTCATGCATGTTTGTCAAATGGTTCTACGGGAAAATAACGTTAGAAAAGATGAACTTAAAGCTCGTGCTCTGGCGCTCAAACACCTTGGAAGGATATTTCAGGAGGAAAAGCAGACACGAAATGGTGGAACTTCAAGAAGGAAAAGTTCAGCTGACACAGACGACGACGGGAGCAGTTCCGATAGCAGTTCTGAAGAGGATTCGCCACGACCACTTTCATATAGAACTCCTTTTCTCACTCAGGGTATTGGCAGGCTCTTCAGGTGCCTTTGCAATCCAGCATTTGATGTTGATGACGAAGAGATTGTTTACAAAAGCAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ DnaJ-X

Protein Analysis

385

Amino Acids

43.55

Weight (kDa)

5.73

Isoelectric Point (pI)

46.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015483)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G77020
fragaria_vesca FvH4_2g15170 FvH4_2g15170
malus_domestica MD05G1010600.v1.1 MD10G1009300.v1.1
prunus_persica Prupe.8G013200_v2.0.a1 Prupe.8G013200_v2.0.a1
pyrus_communis pycom05g00560
rosa_chinensis RchiOBHm_Chr6g0277831
rosa_laevigata RLG00000013265
rosa_rugosa Rorug06G0111800 Rorug06G0111900
rosa_samantha Rh6AG222600 Rh6CG228600 Rh6DG219700
rosa_wichuraiana Rw6G019440

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1095
AccIII TCCGGA 1 cut(s) 103
AciI CCGC 1 cut(s) 735
AclI AACGTT 1 cut(s) 870
AclWI GGATC 2 cut(s) 116, 173
AcsI RAATTY 1 cut(s) 63
AcuI CTGAAG 3 cut(s) 510, 1044, 1075
AfaI GTAC 3 cut(s) 150, 606, 627
AgsI TTSAA 9 cut(s) 382, 452, 527, 698, 755, 790, 808, 824, 966
AloI GAACNNNNNNTCC 1 cut(s) 34
Alw21I GWGCWC 1 cut(s) 901
Alw26I GTCTC 1 cut(s) 553
AlwI GGATC 2 cut(s) 116, 173
AlwNI CAGNNNCTG 1 cut(s) 53
Aor13HI TCCGGA 1 cut(s) 103
AoxI GGCC 2 cut(s) 324, 736
ApeKI GCWGC 4 cut(s) 131, 512, 566, 665
ApoI RAATTY 1 cut(s) 63
Asp700I GAANNNNTTC 2 cut(s) 63, 141
AspA2I CCTAGG 1 cut(s) 598
AspLEI GCGC 1 cut(s) 907
AspS9I GGNCC 1 cut(s) 737
AsuHPI GGTGA 5 cut(s) 16, 167, 356, 362, 467
AsuNHI GCTAGC 1 cut(s) 412
AvrII CCTAGG 1 cut(s) 598
AxyI CCTNAGG 1 cut(s) 126
BanI GGYRCC 1 cut(s) 1095
BauI CACGAG 1 cut(s) 894
Bbv12I GWGCWC 1 cut(s) 901
BbvCI CCTCAGC 2 cut(s) 32, 46
BbvI GCAGC 4 cut(s) 118, 524, 578, 652
BccI CCATC 1 cut(s) 722
BcoDI GTCTC 1 cut(s) 553
BfaI CTAG 5 cut(s) 152, 228, 308, 413, 599
BfmI CTRYAG 1 cut(s) 312
BfoI RGCGCY 1 cut(s) 908
BisI GCNGC 5 cut(s) 132, 513, 567, 666, 736
BlnI CCTAGG 1 cut(s) 598
BlsI GCNGC 5 cut(s) 133, 514, 568, 667, 737
BmgT120I GGNCC 1 cut(s) 737
BmiI GGNNCC 1 cut(s) 1097
BmsI GCATC 3 cut(s) 184, 326, 499
BmtI GCTAGC 1 cut(s) 416
Bpu10I CCTNAGC 2 cut(s) 32, 46
BpuEI CTTGAG 1 cut(s) 410
BsaAI YACGTR 1 cut(s) 550
BsaJI CCNNGG 2 cut(s) 598, 916
BsaWI WCCGGW 1 cut(s) 103
Bse1I ACTGG 1 cut(s) 182
Bse21I CCTNAGG 1 cut(s) 126
BseAI TCCGGA 1 cut(s) 103
BseDI CCNNGG 2 cut(s) 598, 916
BseGI GGATG 2 cut(s) 100, 733
BseMII CTCAG 7 cut(s) 6, 45, 46, 60, 140, 609, 1085
BseNI ACTGG 1 cut(s) 182
BseXI GCAGC 4 cut(s) 118, 524, 578, 652
BshFI GGCC 2 cut(s) 326, 738
BshNI GGYRCC 1 cut(s) 1095
BsiHKAI GWGCWC 1 cut(s) 901
BsiSI CCGG 1 cut(s) 104
BslFI GGGAC 2 cut(s) 27, 651
BsmAI GTCTC 1 cut(s) 553
BsmFI GGGAC 2 cut(s) 27, 651
BsnI GGCC 2 cut(s) 326, 738
Bsp1286I GDGCHC 1 cut(s) 901
Bsp13I TCCGGA 1 cut(s) 103
Bsp143I GATC 3 cut(s) 121, 178, 202
BspACI CCGC 1 cut(s) 735
BspANI GGCC 2 cut(s) 326, 738
BspCNI CTCAG 7 cut(s) 7, 45, 46, 59, 139, 610, 1084
BspEI TCCGGA 1 cut(s) 103
BspLI GGNNCC 1 cut(s) 1097
BspOI GCTAGC 1 cut(s) 416
BspPI GGATC 2 cut(s) 116, 173
BspQI GCTCTTC 1 cut(s) 1094
BspT107I GGYRCC 1 cut(s) 1095
BsrI ACTGG 1 cut(s) 182
BssECI CCNNGG 2 cut(s) 598, 916
BssMI GATC 3 cut(s) 121, 178, 202
BssSI CACGAG 1 cut(s) 894
BssT1I CCWWGG 2 cut(s) 598, 916
Bst2BI CACGAG 1 cut(s) 894
Bst6I CTCTTC 4 cut(s) 334, 1020, 1094, 1125
BstAPI GCANNNNNTGC 1 cut(s) 674
BstBAI YACGTR 1 cut(s) 550
BstC8I GCNNGC 3 cut(s) 414, 480, 1085
BstDEI CTNAG 7 cut(s) 15, 32, 46, 54, 126, 618, 1071
BstF5I GGATG 2 cut(s) 100, 733
BstH2I RGCGCY 1 cut(s) 908
BstHHI GCGC 1 cut(s) 907
BstKTI GATC 3 cut(s) 124, 181, 205
BstMAI GTCTC 1 cut(s) 553
BstMBI GATC 3 cut(s) 121, 178, 202
BstMWI GCNNNNNNNGC 3 cut(s) 260, 323, 674
BstNSI RCATGY 2 cut(s) 482, 842
BstSFI CTRYAG 1 cut(s) 312
BstSNI TACGTA 1 cut(s) 550
BstV1I GCAGC 4 cut(s) 118, 524, 578, 652
Bsu36I CCTNAGG 1 cut(s) 126
BsuRI GGCC 2 cut(s) 326, 738
BtsCI GGATG 2 cut(s) 100, 733
BtsIMutI CAGTG 1 cut(s) 189
Cac8I GCNNGC 3 cut(s) 414, 480, 1085
CaiI CAGNNNCTG 1 cut(s) 53
CfoI GCGC 1 cut(s) 907
Cfr13I GGNCC 1 cut(s) 737
CseI GACGC 1 cut(s) 25
Csp6I GTAC 3 cut(s) 149, 605, 626
CviAII CATG 5 cut(s) 238, 371, 479, 835, 839
CviQI GTAC 3 cut(s) 149, 605, 626
DdeI CTNAG 7 cut(s) 15, 32, 46, 54, 126, 618, 1071
DpnI GATC 3 cut(s) 123, 180, 204
DpnII GATC 3 cut(s) 121, 178, 202
DraI TTTAAA 1 cut(s) 721
Eam1104I CTCTTC 4 cut(s) 334, 1020, 1094, 1125
EarI CTCTTC 4 cut(s) 334, 1020, 1094, 1125
Eco105I TACGTA 1 cut(s) 550
Eco130I CCWWGG 2 cut(s) 598, 916
Eco57I CTGAAG 3 cut(s) 510, 1044, 1075
Eco81I CCTNAGG 1 cut(s) 126
EcoT14I CCWWGG 2 cut(s) 598, 916
EcoT22I ATGCAT 2 cut(s) 199, 840
ErhI CCWWGG 2 cut(s) 598, 916
FaeI CATG 5 cut(s) 241, 374, 482, 838, 842
FalI AAGNNNNNCTT 4 cut(s) 768, 800, 870, 902
FaqI GGGAC 2 cut(s) 27, 651
FatI CATG 5 cut(s) 237, 370, 478, 834, 838
FauNDI CATATG 1 cut(s) 199
Fnu4HI GCNGC 5 cut(s) 132, 513, 567, 666, 736
FokI GGATG 2 cut(s) 87, 740
Fsp4HI GCNGC 5 cut(s) 132, 513, 567, 666, 736
FspBI CTAG 5 cut(s) 152, 228, 308, 413, 599
GlaI GCGC 1 cut(s) 906
GluI GCNGC 5 cut(s) 132, 513, 567, 666, 736
HaeII RGCGCY 1 cut(s) 908
HaeIII GGCC 2 cut(s) 326, 738
HapII CCGG 1 cut(s) 104
HgaI GACGC 1 cut(s) 25
HhaI GCGC 1 cut(s) 907
Hin1II CATG 5 cut(s) 241, 374, 482, 838, 842
Hin6I GCGC 1 cut(s) 905
HinP1I GCGC 1 cut(s) 905
HindIII AAGCTT 1 cut(s) 159
HinfI GANTC 4 cut(s) 468, 485, 755, 1031
HpaII CCGG 1 cut(s) 104
HphI GGTGA 5 cut(s) 16, 167, 356, 362, 467
Hpy166II GTNNAC 2 cut(s) 817, 1141
Hpy188I TCNGA 6 cut(s) 55, 275, 490, 508, 1012, 1024
Hpy188III TCNNGA 7 cut(s) 104, 391, 558, 646, 698, 932, 966
Hpy8I GTNNAC 2 cut(s) 817, 1141
Hpy99I CGWCG 3 cut(s) 714, 998, 1001
HpyAV CCTTC 4 cut(s) 341, 376, 915, 963
HpyCH4IV ACGT 2 cut(s) 549, 870
HpyCH4V TGCA 8 cut(s) 187, 197, 222, 370, 512, 668, 838, 1104
HpyF10VI GCNNNNNNNGC 3 cut(s) 260, 323, 674
HpyF3I CTNAG 7 cut(s) 15, 32, 46, 54, 126, 618, 1071
HpySE526I ACGT 2 cut(s) 549, 870
Hsp92II CATG 5 cut(s) 241, 374, 482, 838, 842
HspAI GCGC 1 cut(s) 905
Kpn2I TCCGGA 1 cut(s) 103
Kzo9I GATC 3 cut(s) 121, 178, 202
LguI GCTCTTC 1 cut(s) 1094
LmnI GCTCC 2 cut(s) 693, 1002
Lsp1109I GCAGC 4 cut(s) 118, 524, 578, 652
LweI GCATC 3 cut(s) 184, 326, 499
MaeI CTAG 5 cut(s) 152, 228, 308, 413, 599
MaeII ACGT 2 cut(s) 549, 870
MaeIII GTNAC 4 cut(s) 350, 455, 651, 826
MalI GATC 3 cut(s) 123, 180, 204
MboI GATC 3 cut(s) 121, 178, 202
MboII GAAGA 7 cut(s) 71, 321, 416, 713, 1037, 1081, 1142
MhlI GDGCHC 1 cut(s) 901
MluCI AATT 7 cut(s) 63, 281, 335, 377, 522, 716, 803
MmeI TCCRAC 1 cut(s) 715
MnlI CCTC 9 cut(s) 41, 49, 55, 135, 283, 337, 457, 928, 1021
Mph1103I ATGCAT 2 cut(s) 199, 840
MroI TCCGGA 1 cut(s) 103
MroXI GAANNNNTTC 2 cut(s) 63, 141
MseI TTAA 5 cut(s) 84, 438, 720, 770, 888
MspA1I CMGCKG 2 cut(s) 254, 983
MspI CCGG 1 cut(s) 104
MwoI GCNNNNNNNGC 3 cut(s) 260, 323, 674
NdeI CATATG 1 cut(s) 199
NdeII GATC 3 cut(s) 121, 178, 202
NheI GCTAGC 1 cut(s) 412
NlaIII CATG 5 cut(s) 241, 374, 482, 838, 842
NlaIV GGNNCC 1 cut(s) 1097
NmuCI GTSAC 3 cut(s) 350, 455, 651
NsiI ATGCAT 2 cut(s) 199, 840
NspI RCATGY 2 cut(s) 482, 842
PaeI GCATGC 1 cut(s) 482
PciSI GCTCTTC 1 cut(s) 1094
PdmI GAANNNNTTC 2 cut(s) 63, 141
PfeI GAWTC 4 cut(s) 468, 485, 755, 1031
PkrI GCNGC 5 cut(s) 133, 514, 568, 667, 737
Ppu21I YACGTR 1 cut(s) 550
Psp1406I AACGTT 1 cut(s) 870
PspN4I GGNNCC 1 cut(s) 1097
PspPI GGNCC 1 cut(s) 737
PstNI CAGNNNCTG 1 cut(s) 53
PvuII CAGCTG 2 cut(s) 254, 983
RsaI GTAC 3 cut(s) 150, 606, 627
RsaNI GTAC 3 cut(s) 149, 605, 626
SapI GCTCTTC 1 cut(s) 1094
SaqAI TTAA 5 cut(s) 84, 438, 720, 770, 888
SatI GCNGC 5 cut(s) 132, 513, 567, 666, 736
Sau3AI GATC 3 cut(s) 121, 178, 202
Sau96I GGNCC 1 cut(s) 737
SduI GDGCHC 1 cut(s) 901
SfaNI GCATC 3 cut(s) 184, 326, 499
SfcI CTRYAG 1 cut(s) 312
SmlI CTYRAG 1 cut(s) 425
SmoI CTYRAG 1 cut(s) 425
SnaBI TACGTA 1 cut(s) 550
SphI GCATGC 1 cut(s) 482
Sse9I AATT 7 cut(s) 63, 281, 335, 377, 522, 716, 803
SsiI CCGC 1 cut(s) 735
SspMI CTAG 5 cut(s) 152, 228, 308, 413, 599
StyI CCWWGG 2 cut(s) 598, 916
TaiI ACGT 2 cut(s) 552, 873
TaqI TCGA 2 cut(s) 205, 557
TasI AATT 7 cut(s) 63, 281, 335, 377, 522, 716, 803
TauI GCSGC 1 cut(s) 738
TfiI GAWTC 4 cut(s) 468, 485, 755, 1031
Tru1I TTAA 5 cut(s) 84, 438, 720, 770, 888
Tru9I TTAA 5 cut(s) 84, 438, 720, 770, 888
TscAI CASTG 1 cut(s) 189
TseFI GTSAC 3 cut(s) 350, 455, 651
TseI GCWGC 4 cut(s) 131, 512, 566, 665
Tsp45I GTSAC 3 cut(s) 350, 455, 651
TspDTI ATGAA 3 cut(s) 89, 897, 1038
TspGWI ACGGA 2 cut(s) 643, 698
TspRI CASTG 1 cut(s) 189
XapI RAATTY 1 cut(s) 63
XceI RCATGY 2 cut(s) 482, 842
XmaJI CCTAGG 1 cut(s) 598
XmnI GAANNNNTTC 2 cut(s) 63, 141
XspI CTAG 5 cut(s) 152, 228, 308, 413, 599
Zsp2I ATGCAT 2 cut(s) 199, 840
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.