Prupe.8G037300_v2.0.a1

Protein FAR1-RELATED SEQUENCE 5-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
3468591 .. 3468899
309 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G037300.1

Sequence Viewer

Length: 309 bp
ATGGACGTGAATACAGAAGTAGAAAACCAAGTTGATGGGATAGAGGAAGATAATAATAAAATGAATGATGAAGTGGGAGTGATACTGATAGTAAGTATGAATTTGGAACCACAAGTGGGGAAAGAATTTAACTCACTTGATGATGTGTATGAGTTCTACAAGACTTATGCAAGAAACTCCGAGTTTGGTATTCGAAAACATTCAAGTAAAAGGATAAGATTTACAAATGAGATAATAAGAAAAGAGTTCGTATGTTGTAGACAAGGGTGTTATGAGCCACCCAAGGATCCCAAACACAAAAGAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

103

Amino Acids

12.04

Weight (kDa)

5.42

Isoelectric Point (pI)

45.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018518)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 259
AclWI GGATC 2 cut(s) 281, 294
AcsI RAATTY 2 cut(s) 100, 125
AfiI CCNNNNNNNGG 1 cut(s) 116
AgsI TTSAA 1 cut(s) 204
AjiI CACGTC 1 cut(s) 7
AlwI GGATC 2 cut(s) 281, 294
ApoI RAATTY 2 cut(s) 100, 125
Asp700I GAANNNNTTC 1 cut(s) 199
AsuII TTCGAA 1 cut(s) 193
BamHI GGATCC 1 cut(s) 286
BccI CCATC 1 cut(s) 29
BmgBI CACGTC 1 cut(s) 7
BmiI GGNNCC 2 cut(s) 108, 288
Bpu14I TTCGAA 1 cut(s) 193
BsaJI CCNNGG 1 cut(s) 282
Bsc4I CCNNNNNNNGG 1 cut(s) 116
BseDI CCNNGG 1 cut(s) 282
BseLI CCNNNNNNNGG 1 cut(s) 116
BslI CCNNNNNNNGG 1 cut(s) 116
Bsp119I TTCGAA 1 cut(s) 193
Bsp143I GATC 1 cut(s) 286
BspLI GGNNCC 2 cut(s) 108, 288
BspPI GGATC 2 cut(s) 281, 294
BspT104I TTCGAA 1 cut(s) 193
BssECI CCNNGG 1 cut(s) 282
BssMI GATC 1 cut(s) 286
BssT1I CCWWGG 1 cut(s) 282
BstBI TTCGAA 1 cut(s) 193
BstKTI GATC 1 cut(s) 289
BstMBI GATC 1 cut(s) 286
BstX2I RGATCY 1 cut(s) 286
BstXI CCANNNNNNTGG 1 cut(s) 35
BstYI RGATCY 1 cut(s) 286
BtrI CACGTC 1 cut(s) 7
CviJI RGCY 1 cut(s) 277
CviKI_1 RGCY 1 cut(s) 277
DpnI GATC 1 cut(s) 288
DpnII GATC 1 cut(s) 286
Eco130I CCWWGG 1 cut(s) 282
EcoT14I CCWWGG 1 cut(s) 282
ErhI CCWWGG 1 cut(s) 282
FaiI YATR 5 cut(s) 98, 150, 168, 253, 273
FblI GTMKAC 1 cut(s) 259
Hpy166II GTNNAC 1 cut(s) 260
Hpy188I TCNGA 1 cut(s) 181
Hpy8I GTNNAC 1 cut(s) 260
HpyCH4IV ACGT 1 cut(s) 6
HpyCH4V TGCA 1 cut(s) 170
HpySE526I ACGT 1 cut(s) 6
Kzo9I GATC 1 cut(s) 286
MaeII ACGT 1 cut(s) 6
MalI GATC 1 cut(s) 288
MboI GATC 1 cut(s) 286
MboII GAAGA 1 cut(s) 59
MflI RGATCY 1 cut(s) 286
MluCI AATT 2 cut(s) 100, 125
MnlI CCTC 1 cut(s) 37
MroXI GAANNNNTTC 1 cut(s) 199
MseI TTAA 1 cut(s) 129
NdeII GATC 1 cut(s) 286
NlaIV GGNNCC 2 cut(s) 108, 288
NspV TTCGAA 1 cut(s) 193
PdmI GAANNNNTTC 1 cut(s) 199
PspN4I GGNNCC 2 cut(s) 108, 288
PsuI RGATCY 1 cut(s) 286
SaqAI TTAA 1 cut(s) 129
Sau3AI GATC 1 cut(s) 286
SetI ASST 1 cut(s) 9
SfuI TTCGAA 1 cut(s) 193
Sse9I AATT 2 cut(s) 100, 125
StyI CCWWGG 1 cut(s) 282
TaiI ACGT 1 cut(s) 9
TaqI TCGA 1 cut(s) 193
TasI AATT 2 cut(s) 100, 125
Tru1I TTAA 1 cut(s) 129
Tru9I TTAA 1 cut(s) 129
TspDTI ATGAA 3 cut(s) 77, 84, 113
XapI RAATTY 2 cut(s) 100, 125
XmiI GTMKAC 1 cut(s) 259
XmnI GAANNNNTTC 1 cut(s) 199
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.