Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0015974

Physical Location & Seq

Genomic Coordinates Forward (+)

14315298 .. 14318093

Gene Structure 2796 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G116000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2292 bp

ATGCGCTCTTCTCTTTCCCTCCTCCGCTCCCTCACACTTTCTCTCTCACACCACCACTACCACCCTACCCACCGATTCCCGAGACCCATCTCTGGTTTCCCGCTCGCCGTCGCCGCCAAATCCCGCCGAGTACTCGCCCTTCCCTCTTCCAGTACTTTCGTCGAACACCTTTCGGGCGAGGCCTCGCAGCCAGGGGAGAATTGGGATTTGAGCAATGTTGCGCAGGGCGAGGCTTTCAATTTAGATAAGTGCTTTTCTTCAGCCGACTTGAAGCACCTGGCAGTTCCGGAGCTTGAGGTTCCGGAGCTCGAGGACCTCCCGGAGCAGTGGCGAAGGTCGAAGCTGGCTTGGCTTTGTAAGGAACTGCCGGCGCATAAGGCCGGCACGTTGAGTCGGATACTCAATGCGCAGAAAAAGTGGATGAGGCAAGAAGATGCCACTTATGTTGCAGTGCATTGTATGCGAATTCGCGAAAATGATGTCGGGTTTAGGGTGTACAAATGGATGATGCAACAACATTGGTATCGTTTTGATTTTGCTCTTGCTACCAAGTTAGCAGATTACATGGGTAAAGAGCGAAAATTCTCAAAGTGTAGGGATATATTTGATGATATAATTAATCAGGGGCGTGTGCCTAGTGAATCTACATTTCATATATTGGTTGTTGCATATCTTAGTGCATCGGTTCAAGGTTGCTTGGAGGAAGCATGTGGCATTTACAATCGTATGATTCAGTTGGGAGGCTACCAGCCCCGGCTTAGCTTGCACAATTCTCTCTTCAAAGCCCTTGTCAGCAAACCTGGAACCTCTTCGAAACATTACCTAAAGCAGGCTGAGTTTATTTTTCATAATTTGGTAACAACTGGACTCGAGATTCACAAGGATATTTATAGTGGCTTAATCTGGCTACATAGCTGTCAGGATACTATAGATAAAGAGAGGATGACATCATTAAGGAAAGAAATGCAACAAGCTGGAATTGAGGTGGGCAGAGATGTGCTTGTGTCTATCTTGAGAGCTTGCTCAAAGGAGGGGGATGTGGAGGAAGCAGAAAGTACTTGGCTCAAACTTCTCCAGCTTGACGTTGGTCTCCCATATCAGGCATATGTTTATAAAATGGAAGCCTATTCAAAGGTTGGAGAACCTAGGAGATCCCTGGAGATATTCAGGGAGATGAAAGAACAGTTGGGTTCAGCCAATGCTGTGGCATATCATAAAGTCATAGAGGTCTATGTAAAGCTCAAGAAGTTGAACTTGCAGAGCTCACATGACAAATTGGAATCAGCTTTCTTCCAGTGCCTTGAGAGATGTCGACCCAGCCGTACGATTTATTCTATATACTTGGATTCTTTGGTGAAAGTTGGTAATCTTGATAAAGCTGAGGAGATCTTTGACCAAATGCAGAGTAATGGGCCAACTGGTATTAACTCTCGGTCCTGCAACACCATATTAAGCGGATACCTATCATCTGGAGATTATGTCAAGGCAGAAAAAATATTTGATCTGATGTGCCAGAAGAAATATGATGTTGACTCCCCATTGATGGAAAAGATTGACTATGTCTTGAGCTTGAGCAGAAAAGTAGTTAAGAGACCTGTAAGCCTGAAGCTGAGCAAAGAACAACGAGAAGTTTTAGTAGGTATGCTGTTGGGTGGTTTGCAGATTGAGTCAGATGAAGACAGGAAGAATCACATGATCCGGTTTGAGTTCAGTGAGAATTCTAGCACACATTCTCTGTTAAGGAGACATATGTATGATCAATACCACGAGTGGCTACATCCTTCTTGTAAAACCAGTGAGAGTACTGATGACATACCATATAACTTTTCAACCATCTCGCATTCTTATTTAGGTTTCTACGCGGACCAGTTTTGGCCAAAAGGTAGACAGGTGATTCCAAAGCTAATCCATAGATGGTTGACACCCTGTGCTCTTGCCTACTGGTATATGTATGGGGGCCACAGGACTTCATCAGGTGACATATTGTTGAAGATAAAGGGAAATGAAGAGGGTGTTGAGAAGATTGTCAGAGCCTTGAAGGCAAAGTCCCTGGATTGCAAGGTGAAGAGGAAGGGGAGATATTTTTGGATTGGTTTTCTGGGAAGTAATTCTACGTGGTTCTGGAAATTAGTAGAACCTTATATTCTAGATGACTTGAAGCATCTTTTAAAAGGTGGCCAAATCTCAGATAACAGCGCGGTTGAAACTGAAAACATCAACTTTGGTAGTGGGTCTGATACTGATGAGAATGCTTCTGAATCTGATCACACTGATAATGATAATAATTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000373 GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0015979 GO:0016043 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0019684 GO:0022607 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0045292 GO:0046483 GO:0048564 GO:0065003 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LAGLIDADG_2 PPR

Protein Analysis

764

Amino Acids

87.49

Weight (kDa)

8.17

Isoelectric Point (pI)

45.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015974)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G15820
fragaria_vesca	FvH4_2g06900
malus_domestica	MD10G1089000.v1.1
prunus_persica	Prupe.8G116000_v2.0.a1
pyrus_communis	pycom10g07190
rosa_chinensis	RchiOBHm_Chr6g0259211
rosa_laevigata	RLG00000014548
rosa_multiflora	Rmu_ssc0000050.1_g000094
rosa_roxburghii	Rroxscaffold_7G00206520
rosa_rugosa	Rorug05G0586000
rosa_samantha	Rh6AG102900 Rh6BG095200 Rh6CG092100 Rh6DG086100
rosa_wichuraiana	Rw6G008880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1113
Acc16I	TGCGCA	2 cut(s)	222, 408
AccBSI	CCGCTC	2 cut(s)	27, 103
AccI	GTMKAC	2 cut(s)	1312, 1885
AccII	CGCG	3 cut(s)	471, 1862, 2198
AccIII	TCCGGA	2 cut(s)	286, 301
AciI	CCGC	7 cut(s)	25, 101, 114, 124, 1455, 1862, 2198
AclWI	GGATC	2 cut(s)	1146, 1690
AcoI	YGGCCR	2 cut(s)	1874, 2176
AcsI	RAATTY	3 cut(s)	465, 581, 1717
AcuI	CTGAAG	2 cut(s)	243, 1625
AdeI	CACNNNGTG	1 cut(s)	1928
AfaI	GTAC	6 cut(s)	132, 154, 497, 1057, 1324, 1804
AfiI	CCNNNNNNNGG	4 cut(s)	92, 829, 1099, 1543
AjnI	CCWGG	5 cut(s)	190, 276, 799, 1155, 2049
AjuI	GAANNNNNNNTTGG	2 cut(s)	1169, 1201
Alw21I	GWGCWC	3 cut(s)	309, 1265, 1933
Alw26I	GTCTC	4 cut(s)	76, 1094, 1585, 1738
AlwI	GGATC	2 cut(s)	1146, 1690
Ama87I	CYCGRG	3 cut(s)	79, 308, 869
Aor13HI	TCCGGA	2 cut(s)	286, 301
AoxI	GGCC	6 cut(s)	180, 378, 1412, 1874, 1957, 2176
ApeKI	GCWGC	1 cut(s)	187
ApoI	RAATTY	3 cut(s)	465, 581, 1717
ArsI	GACNNNNNNTTYG	4 cut(s)	465, 497, 774, 806
AseI	ATTAAT	1 cut(s)	618
Asp700I	GAANNNNTTC	2 cut(s)	808, 2107
AspA2I	CCTAGG	1 cut(s)	1145
AspLEI	GCGC	5 cut(s)	6, 223, 373, 409, 2198
AspS9I	GGNCC	5 cut(s)	313, 1412, 1434, 1864, 1957
AsuC2I	CCSGG	2 cut(s)	320, 754
AsuHPI	GGTGA	4 cut(s)	1366, 1903, 1988, 2074
AsuII	TTCGAA	1 cut(s)	812
AvaI	CYCGRG	3 cut(s)	79, 308, 869
AvaII	GGWCC	3 cut(s)	313, 1434, 1864
AvrII	CCTAGG	1 cut(s)	1145
BaeI	ACNNNNGTAYC	2 cut(s)	506, 539
BalI	TGGCCA	2 cut(s)	1876, 2178
BanII	GRGCYC	2 cut(s)	309, 1265
BarI	GAAGNNNNNNTAC	4 cut(s)	123, 155, 2095, 2127
BauI	CACGAG	1 cut(s)	1766
BbsI	GAAGAC	1 cut(s)	1683
Bbv12I	GWGCWC	3 cut(s)	309, 1265, 1933
BbvCI	CCTCAGC	1 cut(s)	1380
BbvI	GCAGC	1 cut(s)	199
BccI	CCATC	4 cut(s)	95, 1537, 1841, 1908
BceAI	ACGGC	2 cut(s)	92, 1305
BciT130I	CCWGG	5 cut(s)	192, 278, 801, 1157, 2051
BciVI	GTATCC	3 cut(s)	390, 916, 1451
BclI	TGATCA	2 cut(s)	1756, 2263
BcnI	CCSGG	2 cut(s)	320, 754
BcoDI	GTCTC	4 cut(s)	76, 1094, 1585, 1738
BfaI	CTAG	4 cut(s)	636, 1146, 1722, 2147
BfmI	CTRYAG	1 cut(s)	927
BfuI	GTATCC	3 cut(s)	390, 916, 1451
BglI	GCCNNNNNGGC	1 cut(s)	2039
BglII	AGATCT	1 cut(s)	1386
BisI	GCNGC	2 cut(s)	114, 188
BlnI	CCTAGG	1 cut(s)	1145
BlpI	GCTNAGC	2 cut(s)	758, 1610
BlsI	GCNGC	2 cut(s)	115, 189
BmcAI	AGTACT	4 cut(s)	132, 154, 1057, 1804
Bme1390I	CCNGG	7 cut(s)	192, 278, 320, 754, 801, 1157, 2051
Bme18I	GGWCC	3 cut(s)	313, 1434, 1864
BmeT110I	CYCGRG	3 cut(s)	79, 308, 869
BmgT120I	GGNCC	5 cut(s)	313, 1412, 1434, 1864, 1957
BmiI	GGNNCC	3 cut(s)	300, 805, 1958
BmrFI	CCNGG	7 cut(s)	192, 278, 320, 754, 801, 1157, 2051
BmsI	GCATC	4 cut(s)	424, 498, 689, 2170
BoxI	GACNNNNGTC	1 cut(s)	1086
BpiI	GAAGAC	1 cut(s)	1683
BpmI	CTGGAG	3 cut(s)	1058, 1178, 1491
Bpu10I	CCTNAGC	1 cut(s)	1380
Bpu1102I	GCTNAGC	2 cut(s)	758, 1610
Bpu14I	TTCGAA	1 cut(s)	812
BpuEI	CTTGAG	6 cut(s)	314, 1033, 1226, 1322, 1585, 1591
BpuMI	CCSGG	2 cut(s)	320, 754
BsaAI	YACGTR	1 cut(s)	2115
BsaBI	GATNNNNATC	1 cut(s)	1462
BsaI	GGTCTC	3 cut(s)	76, 1094, 1585
BsaJI	CCNNGG	5 cut(s)	191, 752, 1145, 1155, 2049
BsaWI	WCCGGW	3 cut(s)	286, 301, 1698
BsaXI	ACNNNNNCTCC	2 cut(s)	1464, 1494
Bsc4I	CCNNNNNNNGG	4 cut(s)	92, 829, 1099, 1543
Bse118I	RCCGGY	2 cut(s)	367, 380
Bse1I	ACTGG	7 cut(s)	150, 868, 1294, 1423, 1794, 1867, 1946
Bse3DI	GCAATG	1 cut(s)	220
Bse8I	GATNNNNATC	1 cut(s)	1462
BseAI	TCCGGA	2 cut(s)	286, 301
BseBI	CCWGG	5 cut(s)	192, 278, 801, 1157, 2051
BseDI	CCNNGG	5 cut(s)	191, 752, 1145, 1155, 2049
BseGI	GGATG	5 cut(s)	426, 510, 948, 1042, 1777
BseJI	GATNNNNATC	1 cut(s)	1462
BseLI	CCNNNNNNNGG	4 cut(s)	92, 829, 1099, 1543
BseMI	GCAATG	1 cut(s)	220
BseMII	CTCAG	4 cut(s)	825, 1371, 1601, 2199
BseNI	ACTGG	7 cut(s)	150, 868, 1294, 1423, 1794, 1867, 1946
BseRI	GAGGAG	2 cut(s)	11, 1397
BseXI	GCAGC	1 cut(s)	199
BseYI	CCCAGC	1 cut(s)	1316
Bsh1236I	CGCG	3 cut(s)	471, 1862, 2198
BshFI	GGCC	6 cut(s)	182, 380, 1414, 1876, 1959, 2178
BsiHKAI	GWGCWC	3 cut(s)	309, 1265, 1933
BsiHKCI	CYCGRG	3 cut(s)	79, 308, 869
BsiSI	CCGG	7 cut(s)	287, 302, 320, 368, 381, 754, 1699
BsiWI	CGTACG	1 cut(s)	1322
BslFI	GGGAC	1 cut(s)	2032
BslI	CCNNNNNNNGG	4 cut(s)	92, 829, 1099, 1543
BsmAI	GTCTC	4 cut(s)	76, 1094, 1585, 1738
BsmFI	GGGAC	1 cut(s)	2032
BsmI	GAATGC	2 cut(s)	1840, 2254
BsnI	GGCC	6 cut(s)	182, 380, 1414, 1876, 1959, 2178
Bso31I	GGTCTC	3 cut(s)	76, 1094, 1585
BsoBI	CYCGRG	3 cut(s)	79, 308, 869
Bsp119I	TTCGAA	1 cut(s)	812
Bsp1286I	GDGCHC	3 cut(s)	309, 1265, 1933
Bsp13I	TCCGGA	2 cut(s)	286, 301
Bsp1407I	TGTACA	1 cut(s)	495
Bsp143I	GATC	6 cut(s)	1151, 1386, 1501, 1695, 1756, 2263
Bsp1720I	GCTNAGC	2 cut(s)	758, 1610
Bsp68I	TCGCGA	1 cut(s)	471
BspACI	CCGC	7 cut(s)	25, 101, 114, 124, 1455, 1862, 2198
BspANI	GGCC	6 cut(s)	182, 380, 1414, 1876, 1959, 2178
BspCNI	CTCAG	4 cut(s)	826, 1372, 1602, 2198
BspEI	TCCGGA	2 cut(s)	286, 301
BspFNI	CGCG	3 cut(s)	471, 1862, 2198
BspLI	GGNNCC	3 cut(s)	300, 805, 1958
BspPI	GGATC	2 cut(s)	1146, 1690
BspQI	GCTCTTC	1 cut(s)	13
BspT104I	TTCGAA	1 cut(s)	812
BspTNI	GGTCTC	3 cut(s)	76, 1094, 1585
BsrBI	CCGCTC	2 cut(s)	27, 103
BsrDI	GCAATG	1 cut(s)	220
BsrFI	RCCGGY	2 cut(s)	367, 380
BsrGI	TGTACA	1 cut(s)	495
BsrI	ACTGG	7 cut(s)	150, 868, 1294, 1423, 1794, 1867, 1946
BssAI	RCCGGY	2 cut(s)	367, 380
BssECI	CCNNGG	5 cut(s)	191, 752, 1145, 1155, 2049
BssMI	GATC	6 cut(s)	1151, 1386, 1501, 1695, 1756, 2263
BssSI	CACGAG	1 cut(s)	1766
BssT1I	CCWWGG	1 cut(s)	1145
Bst2BI	CACGAG	1 cut(s)	1766
Bst2UI	CCWGG	5 cut(s)	192, 278, 801, 1157, 2051
Bst4CI	ACNGT	1 cut(s)	1185
Bst6I	CTCTTC	6 cut(s)	13, 151, 782, 814, 2001, 2060
BstAPI	GCANNNNNTGC	1 cut(s)	460
BstAUI	TGTACA	1 cut(s)	495
BstBAI	YACGTR	1 cut(s)	2115
BstBI	TTCGAA	1 cut(s)	812
BstC8I	GCNNGC	7 cut(s)	105, 345, 369, 382, 764, 831, 1021
BstDEI	CTNAG	6 cut(s)	674, 758, 834, 1380, 1610, 2185
BstENI	CCTNNNNNAGG	1 cut(s)	827
BstF5I	GGATG	5 cut(s)	426, 510, 948, 1042, 1777
BstFNI	CGCG	3 cut(s)	471, 1862, 2198
BstHHI	GCGC	5 cut(s)	6, 223, 373, 409, 2198
BstKTI	GATC	6 cut(s)	1154, 1389, 1504, 1698, 1759, 2266
BstMAI	GTCTC	4 cut(s)	76, 1094, 1585, 1738
BstMBI	GATC	6 cut(s)	1151, 1386, 1501, 1695, 1756, 2263
BstMWI	GCNNNNNNNGC	6 cut(s)	113, 349, 377, 460, 763, 2039
BstNI	CCWGG	5 cut(s)	192, 278, 801, 1157, 2051
BstNSI	RCATGY	1 cut(s)	711
BstPAI	GACNNNNGTC	1 cut(s)	1086
BstSCI	CCNGG	7 cut(s)	190, 276, 318, 752, 799, 1155, 2049
BstSFI	CTRYAG	1 cut(s)	927
BstUI	CGCG	3 cut(s)	471, 1862, 2198
BstV1I	GCAGC	1 cut(s)	199
BstV2I	GAAGAC	1 cut(s)	1683
BstX2I	RGATCY	2 cut(s)	1151, 1386
BstXI	CCANNNNNNTGG	1 cut(s)	1204
BstYI	RGATCY	2 cut(s)	1151, 1386
BsuI	GTATCC	3 cut(s)	390, 916, 1451
BsuRI	GGCC	6 cut(s)	182, 380, 1414, 1876, 1959, 2178
BtsCI	GGATG	5 cut(s)	426, 510, 948, 1042, 1777
BtsI	GCAGTG	2 cut(s)	332, 456
BtsIMutI	CAGTG	6 cut(s)	332, 456, 1301, 1717, 1801, 2268
BtuMI	TCGCGA	1 cut(s)	471
Cac8I	GCNNGC	7 cut(s)	105, 345, 369, 382, 764, 831, 1021
CfoI	GCGC	5 cut(s)	6, 223, 373, 409, 2198
Cfr10I	RCCGGY	2 cut(s)	367, 380
Cfr13I	GGNCC	5 cut(s)	313, 1412, 1434, 1864, 1957
Csp6I	GTAC	6 cut(s)	131, 153, 496, 1056, 1323, 1803
CspCI	CAANNNNNGTGG	2 cut(s)	427, 462
CviAII	CATG	4 cut(s)	565, 708, 1268, 1693
CviQI	GTAC	6 cut(s)	131, 153, 496, 1056, 1323, 1803
DdeI	CTNAG	6 cut(s)	674, 758, 834, 1380, 1610, 2185
DpnI	GATC	6 cut(s)	1153, 1388, 1503, 1697, 1758, 2265
DpnII	GATC	6 cut(s)	1151, 1386, 1501, 1695, 1756, 2263
DraI	TTTAAA	1 cut(s)	2169
DraIII	CACNNNGTG	1 cut(s)	1928
EaeI	YGGCCR	2 cut(s)	1874, 2176
Eam1104I	CTCTTC	6 cut(s)	13, 151, 782, 814, 2001, 2060
EarI	CTCTTC	6 cut(s)	13, 151, 782, 814, 2001, 2060
Ecl136II	GAGCTC	2 cut(s)	307, 1263
Eco130I	CCWWGG	1 cut(s)	1145
Eco147I	AGGCCT	1 cut(s)	182
Eco24I	GRGCYC	2 cut(s)	309, 1265
Eco31I	GGTCTC	3 cut(s)	76, 1094, 1585
Eco47I	GGWCC	3 cut(s)	313, 1434, 1864
Eco53kI	GAGCTC	2 cut(s)	307, 1263
Eco57I	CTGAAG	2 cut(s)	243, 1625
Eco88I	CYCGRG	3 cut(s)	79, 308, 869
EcoICRI	GAGCTC	2 cut(s)	307, 1263
EcoNI	CCTNNNNNAGG	1 cut(s)	827
EcoO109I	RGGNCCY	1 cut(s)	313
EcoRI	GAATTC	2 cut(s)	465, 1717
EcoRII	CCWGG	5 cut(s)	190, 276, 799, 1155, 2049
EcoT14I	CCWWGG	1 cut(s)	1145
EcoT38I	GRGCYC	2 cut(s)	309, 1265
ErhI	CCWWGG	1 cut(s)	1145
FaeI	CATG	4 cut(s)	568, 711, 1271, 1696
FalI	AAGNNNNNCTT	2 cut(s)	1238, 1270
FaqI	GGGAC	1 cut(s)	2032
FatI	CATG	4 cut(s)	564, 707, 1267, 1692
FauI	CCCGC	2 cut(s)	108, 131
FauNDI	CATATG	2 cut(s)	1105, 1749
FbaI	TGATCA	2 cut(s)	1756, 2263
FblI	GTMKAC	2 cut(s)	1312, 1885
Fnu4HI	GCNGC	2 cut(s)	114, 188
FokI	GGATG	5 cut(s)	433, 517, 955, 1049, 1764
FriOI	GRGCYC	2 cut(s)	309, 1265
Fsp4HI	GCNGC	2 cut(s)	114, 188
FspBI	CTAG	4 cut(s)	636, 1146, 1722, 2147
FspI	TGCGCA	2 cut(s)	222, 408
GlaI	GCGC	5 cut(s)	5, 222, 372, 408, 2197
GluI	GCNGC	2 cut(s)	114, 188
GsaI	CCCAGC	1 cut(s)	1320
GsuI	CTGGAG	3 cut(s)	1058, 1178, 1491
HaeIII	GGCC	6 cut(s)	182, 380, 1414, 1876, 1959, 2178
HapII	CCGG	7 cut(s)	287, 302, 320, 368, 381, 754, 1699
HhaI	GCGC	5 cut(s)	6, 223, 373, 409, 2198
Hin1II	CATG	4 cut(s)	568, 711, 1271, 1696
Hin6I	GCGC	5 cut(s)	4, 221, 371, 407, 2196
HinP1I	GCGC	5 cut(s)	4, 221, 371, 407, 2196
HincII	GTYRAC	3 cut(s)	1313, 1531, 1920
HindII	GTYRAC	3 cut(s)	1313, 1531, 1920
HpaII	CCGG	7 cut(s)	287, 302, 320, 368, 381, 754, 1699
HphI	GGTGA	4 cut(s)	1366, 1903, 1988, 2074
Hpy166II	GTNNAC	5 cut(s)	496, 1313, 1531, 1886, 1920
Hpy188I	TCNGA	8 cut(s)	396, 1506, 1672, 2030, 2188, 2236, 2257, 2263
Hpy8I	GTNNAC	5 cut(s)	496, 1313, 1531, 1886, 1920
Hpy99I	CGWCG	2 cut(s)	113, 164
HpyAV	CCTTC	5 cut(s)	149, 327, 1791, 2032, 2065
HpyCH4III	ACNGT	1 cut(s)	1185
HpyCH4IV	ACGT	3 cut(s)	386, 1083, 2114
HpyF10VI	GCNNNNNNNGC	6 cut(s)	113, 349, 377, 460, 763, 2039
HpyF3I	CTNAG	6 cut(s)	674, 758, 834, 1380, 1610, 2185
HpySE526I	ACGT	3 cut(s)	386, 1083, 2114
Hsp92II	CATG	4 cut(s)	568, 711, 1271, 1696
HspAI	GCGC	5 cut(s)	4, 221, 371, 407, 2196
Kpn2I	TCCGGA	2 cut(s)	286, 301
KroI	GCCGGC	2 cut(s)	367, 380
KroNI	GCCGGC	2 cut(s)	369, 382
Ksp22I	TGATCA	2 cut(s)	1756, 2263
Kzo9I	GATC	6 cut(s)	1151, 1386, 1501, 1695, 1756, 2263
LguI	GCTCTTC	1 cut(s)	13
LmnI	GCTCC	4 cut(s)	32, 289, 304, 322
Lsp1109I	GCAGC	1 cut(s)	199
LweI	GCATC	4 cut(s)	424, 498, 689, 2170
MaeI	CTAG	4 cut(s)	636, 1146, 1722, 2147
MaeII	ACGT	3 cut(s)	386, 1083, 2114
MaeIII	GTNAC	2 cut(s)	856, 1976
MalI	GATC	6 cut(s)	1153, 1388, 1503, 1697, 1758, 2265
MbiI	CCGCTC	2 cut(s)	27, 103
MboI	GATC	6 cut(s)	1151, 1386, 1501, 1695, 1756, 2263
MflI	RGATCY	2 cut(s)	1151, 1386
MhlI	GDGCHC	3 cut(s)	309, 1265, 1933
MlsI	TGGCCA	2 cut(s)	1876, 2178
MluNI	TGGCCA	2 cut(s)	1876, 2178
MlyI	GAGTC	4 cut(s)	400, 861, 1526, 1676
MmeI	TCCRAC	2 cut(s)	374, 1117
Mox20I	TGGCCA	2 cut(s)	1876, 2178
MroI	TCCGGA	2 cut(s)	286, 301
MroNI	GCCGGC	2 cut(s)	367, 380
MroXI	GAANNNNTTC	2 cut(s)	808, 2107
MscI	TGGCCA	2 cut(s)	1876, 2178
MseI	TTAA	8 cut(s)	618, 899, 953, 1425, 1451, 1587, 1739, 2168
MslI	CAYNNNNRTG	1 cut(s)	1752
Msp20I	TGGCCA	2 cut(s)	1876, 2178
MspI	CCGG	7 cut(s)	287, 302, 320, 368, 381, 754, 1699
MspR9I	CCNGG	7 cut(s)	192, 278, 320, 754, 801, 1157, 2051
Mva1269I	GAATGC	2 cut(s)	1840, 2254
MvaI	CCWGG	5 cut(s)	192, 278, 801, 1157, 2051
MvnI	CGCG	3 cut(s)	471, 1862, 2198
MwoI	GCNNNNNNNGC	6 cut(s)	113, 349, 377, 460, 763, 2039
NaeI	GCCGGC	2 cut(s)	369, 382
NciI	CCSGG	2 cut(s)	320, 754
NdeI	CATATG	2 cut(s)	1105, 1749
NdeII	GATC	6 cut(s)	1151, 1386, 1501, 1695, 1756, 2263
NgoMIV	GCCGGC	2 cut(s)	367, 380
NlaIII	CATG	4 cut(s)	568, 711, 1271, 1696
NlaIV	GGNNCC	3 cut(s)	300, 805, 1958
NmeAIII	GCCGAG	1 cut(s)	152
NmuCI	GTSAC	1 cut(s)	1976
NruI	TCGCGA	1 cut(s)	471
NsbI	TGCGCA	2 cut(s)	222, 408
NspI	RCATGY	1 cut(s)	711
NspV	TTCGAA	1 cut(s)	812
PaeR7I	CTCGAG	2 cut(s)	308, 869
PceI	AGGCCT	1 cut(s)	182
PciSI	GCTCTTC	1 cut(s)	13
PcsI	WCGNNNNNNNCGW	1 cut(s)	1318
PctI	GAATGC	2 cut(s)	1840, 2254
PdiI	GCCGGC	2 cut(s)	369, 382
PdmI	GAANNNNTTC	2 cut(s)	808, 2107
PfeI	GAWTC	9 cut(s)	75, 641, 730, 874, 1280, 1346, 1687, 1894, 2258
Pfl23II	CGTACG	1 cut(s)	1322
PflFI	GACNNNGTC	1 cut(s)	1559
PfoI	TCCNGGA	1 cut(s)	318
PkrI	GCNGC	2 cut(s)	115, 189
PleI	GAGTC	4 cut(s)	399, 861, 1526, 1675
PpsI	GAGTC	4 cut(s)	399, 861, 1526, 1675
Ppu21I	YACGTR	1 cut(s)	2115
PpuMI	RGGWCCY	1 cut(s)	313
PshAI	GACNNNNGTC	1 cut(s)	1086
PshBI	ATTAAT	1 cut(s)	618
PsiI	TTATAA	1 cut(s)	1113
Psp124BI	GAGCTC	2 cut(s)	309, 1265
Psp5II	RGGWCCY	1 cut(s)	313
Psp6I	CCWGG	5 cut(s)	190, 276, 799, 1155, 2049
PspFI	CCCAGC	1 cut(s)	1316
PspGI	CCWGG	5 cut(s)	190, 276, 799, 1155, 2049
PspLI	CGTACG	1 cut(s)	1322
PspN4I	GGNNCC	3 cut(s)	300, 805, 1958
PspPI	GGNCC	5 cut(s)	313, 1412, 1434, 1864, 1957
PspPPI	RGGWCCY	1 cut(s)	313
PspXI	VCTCGAGB	1 cut(s)	308
PsuI	RGATCY	2 cut(s)	1151, 1386
PsyI	GACNNNGTC	1 cut(s)	1559
RruI	TCGCGA	1 cut(s)	471
RsaI	GTAC	6 cut(s)	132, 154, 497, 1057, 1324, 1804
RsaNI	GTAC	6 cut(s)	131, 153, 496, 1056, 1323, 1803
RseI	CAYNNNNRTG	1 cut(s)	1752
SacI	GAGCTC	2 cut(s)	309, 1265
SalI	GTCGAC	1 cut(s)	1311
SapI	GCTCTTC	1 cut(s)	13
SaqAI	TTAA	8 cut(s)	618, 899, 953, 1425, 1451, 1587, 1739, 2168
SatI	GCNGC	2 cut(s)	114, 188
Sau3AI	GATC	6 cut(s)	1151, 1386, 1501, 1695, 1756, 2263
Sau96I	GGNCC	5 cut(s)	313, 1412, 1434, 1864, 1957
ScaI	AGTACT	4 cut(s)	132, 154, 1057, 1804
SchI	GAGTC	4 cut(s)	400, 861, 1526, 1676
ScrFI	CCNGG	7 cut(s)	192, 278, 320, 754, 801, 1157, 2051
SduI	GDGCHC	3 cut(s)	309, 1265, 1933
SfaNI	GCATC	4 cut(s)	424, 498, 689, 2170
SfcI	CTRYAG	1 cut(s)	927
Sfr274I	CTCGAG	2 cut(s)	308, 869
SfuI	TTCGAA	1 cut(s)	812
SinI	GGWCC	3 cut(s)	313, 1434, 1864
SlaI	CTCGAG	2 cut(s)	308, 869
SmiMI	CAYNNNNRTG	1 cut(s)	1752
SmlI	CTYRAG	8 cut(s)	293, 308, 869, 1012, 1241, 1301, 1564, 1570
SmoI	CTYRAG	8 cut(s)	293, 308, 869, 1012, 1241, 1301, 1564, 1570
SseBI	AGGCCT	1 cut(s)	182
SsiI	CCGC	7 cut(s)	25, 101, 114, 124, 1455, 1862, 2198
SspI	AATATT	1 cut(s)	1497
SspMI	CTAG	4 cut(s)	636, 1146, 1722, 2147
SstI	GAGCTC	2 cut(s)	309, 1265
StuI	AGGCCT	1 cut(s)	182
StyD4I	CCNGG	7 cut(s)	190, 276, 318, 752, 799, 1155, 2049
StyI	CCWWGG	1 cut(s)	1145
TaaI	ACNGT	1 cut(s)	1185
TaiI	ACGT	3 cut(s)	389, 1086, 2117
TaqI	TCGA	6 cut(s)	162, 309, 338, 812, 870, 1312
TaqII	GACCGA	1 cut(s)	1422
TatI	WGTACW	5 cut(s)	130, 152, 495, 1055, 1802
TauI	GCSGC	1 cut(s)	116
TfiI	GAWTC	9 cut(s)	75, 641, 730, 874, 1280, 1346, 1687, 1894, 2258
Tru1I	TTAA	8 cut(s)	618, 899, 953, 1425, 1451, 1587, 1739, 2168
Tru9I	TTAA	8 cut(s)	618, 899, 953, 1425, 1451, 1587, 1739, 2168
TscAI	CASTG	6 cut(s)	332, 456, 1301, 1717, 1801, 2275
TseFI	GTSAC	1 cut(s)	1976
TseI	GCWGC	1 cut(s)	187
Tsp45I	GTSAC	1 cut(s)	1976
TspDTI	ATGAA	6 cut(s)	641, 836, 1190, 1689, 1959, 2019
TspRI	CASTG	6 cut(s)	332, 456, 1301, 1717, 1801, 2275
Tth111I	GACNNNGTC	1 cut(s)	1559
VpaK11BI	GGWCC	3 cut(s)	313, 1434, 1864
VspI	ATTAAT	1 cut(s)	618
XagI	CCTNNNNNAGG	1 cut(s)	827
XapI	RAATTY	3 cut(s)	465, 581, 1717
XbaI	TCTAGA	1 cut(s)	2146
XceI	RCATGY	1 cut(s)	711
XcmI	CCANNNNNNNNNTGG	2 cut(s)	198, 1082
XhoI	CTCGAG	2 cut(s)	308, 869
XmaJI	CCTAGG	1 cut(s)	1145
XmiI	GTMKAC	2 cut(s)	1312, 1885
XmnI	GAANNNNTTC	2 cut(s)	808, 2107
XspI	CTAG	4 cut(s)	636, 1146, 1722, 2147
ZrmI	AGTACT	4 cut(s)	132, 154, 1057, 1804

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.