Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G15820 |
| fragaria_vesca | FvH4_2g06900 |
| malus_domestica | MD10G1089000.v1.1 |
| prunus_persica | Prupe.8G116000_v2.0.a1 |
| pyrus_communis | pycom10g07190 |
| rosa_chinensis | RchiOBHm_Chr6g0259211 |
| rosa_laevigata | RLG00000014548 |
| rosa_multiflora | Rmu_ssc0000050.1_g000094 |
| rosa_roxburghii | Rroxscaffold_7G00206520 |
| rosa_rugosa | Rorug05G0586000 |
| rosa_samantha | Rh6AG102900 Rh6BG095200 Rh6CG092100 Rh6DG086100 |
| rosa_wichuraiana | Rw6G008880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 236 |
| AciI | CCGC | 2 cut(s) | 207, 210 |
| AclWI | GGATC | 1 cut(s) | 260 |
| AcoI | YGGCCR | 1 cut(s) | 204 |
| AcsI | RAATTY | 1 cut(s) | 274 |
| AfaI | GTAC | 2 cut(s) | 181, 282 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 141, 169, 248, 249 |
| AluBI | AGCT | 2 cut(s) | 21, 98 |
| AluI | AGCT | 2 cut(s) | 21, 98 |
| Alw26I | GTCTC | 1 cut(s) | 32 |
| AlwI | GGATC | 1 cut(s) | 260 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 24 |
| AoxI | GGCC | 1 cut(s) | 204 |
| ApeKI | GCWGC | 1 cut(s) | 18 |
| ApoI | RAATTY | 1 cut(s) | 274 |
| AsuHPI | GGTGA | 1 cut(s) | 16 |
| BanI | GGYRCC | 1 cut(s) | 236 |
| BbvI | GCAGC | 1 cut(s) | 30 |
| BcoDI | GTCTC | 1 cut(s) | 32 |
| BisI | GCNGC | 3 cut(s) | 19, 207, 210 |
| BlsI | GCNGC | 3 cut(s) | 20, 208, 211 |
| BmcAI | AGTACT | 1 cut(s) | 181 |
| BmiI | GGNNCC | 1 cut(s) | 238 |
| BmsI | GCATC | 1 cut(s) | 95 |
| BsaWI | WCCGGW | 1 cut(s) | 141 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 141, 169, 248, 249 |
| BseGI | GGATG | 1 cut(s) | 86 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 141, 169, 248, 249 |
| BseRI | GAGGAG | 2 cut(s) | 117, 276 |
| BseXI | GCAGC | 1 cut(s) | 30 |
| BshFI | GGCC | 1 cut(s) | 206 |
| BshNI | GGYRCC | 1 cut(s) | 236 |
| BsiSI | CCGG | 1 cut(s) | 142 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 141, 169, 248, 249 |
| BsmAI | GTCTC | 1 cut(s) | 32 |
| BsnI | GGCC | 1 cut(s) | 206 |
| Bsp143I | GATC | 2 cut(s) | 36, 252 |
| BspACI | CCGC | 2 cut(s) | 207, 210 |
| BspANI | GGCC | 1 cut(s) | 206 |
| BspLI | GGNNCC | 1 cut(s) | 238 |
| BspPI | GGATC | 1 cut(s) | 260 |
| BspT107I | GGYRCC | 1 cut(s) | 236 |
| BssMI | GATC | 2 cut(s) | 36, 252 |
| Bst6I | CTCTTC | 2 cut(s) | 35, 52 |
| BstDEI | CTNAG | 1 cut(s) | 183 |
| BstF5I | GGATG | 1 cut(s) | 86 |
| BstKTI | GATC | 2 cut(s) | 39, 255 |
| BstMAI | GTCTC | 1 cut(s) | 32 |
| BstMBI | GATC | 2 cut(s) | 36, 252 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 234 |
| BstV1I | GCAGC | 1 cut(s) | 30 |
| BsuRI | GGCC | 1 cut(s) | 206 |
| BtsCI | GGATG | 1 cut(s) | 86 |
| BtsI | GCAGTG | 1 cut(s) | 235 |
| BtsIMutI | CAGTG | 1 cut(s) | 235 |
| CaiI | CAGNNNCTG | 1 cut(s) | 24 |
| Csp6I | GTAC | 2 cut(s) | 180, 281 |
| CviAII | CATG | 2 cut(s) | 14, 77 |
| CviJI | RGCY | 4 cut(s) | 11, 21, 98, 206 |
| CviKI_1 | RGCY | 4 cut(s) | 11, 21, 98, 206 |
| CviQI | GTAC | 2 cut(s) | 180, 281 |
| DdeI | CTNAG | 1 cut(s) | 183 |
| DpnI | GATC | 2 cut(s) | 38, 254 |
| DpnII | GATC | 2 cut(s) | 36, 252 |
| EaeI | YGGCCR | 1 cut(s) | 204 |
| Eam1104I | CTCTTC | 2 cut(s) | 35, 52 |
| EarI | CTCTTC | 2 cut(s) | 35, 52 |
| EcoT22I | ATGCAT | 1 cut(s) | 82 |
| FaeI | CATG | 2 cut(s) | 17, 80 |
| FaiI | YATR | 8 cut(s) | 15, 56, 78, 82, 150, 203, 225, 295 |
| FatI | CATG | 2 cut(s) | 13, 76 |
| Fnu4HI | GCNGC | 3 cut(s) | 19, 207, 210 |
| FokI | GGATG | 1 cut(s) | 73 |
| Fsp4HI | GCNGC | 3 cut(s) | 19, 207, 210 |
| GluI | GCNGC | 3 cut(s) | 19, 207, 210 |
| HaeIII | GGCC | 1 cut(s) | 206 |
| HapII | CCGG | 1 cut(s) | 142 |
| Hin1II | CATG | 2 cut(s) | 17, 80 |
| HpaII | CCGG | 1 cut(s) | 142 |
| HphI | GGTGA | 1 cut(s) | 16 |
| Hpy188III | TCNNGA | 2 cut(s) | 34, 170 |
| Hpy99I | CGWCG | 1 cut(s) | 171 |
| HpyAV | CCTTC | 2 cut(s) | 141, 227 |
| HpyCH4V | TGCA | 1 cut(s) | 80 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 234 |
| HpyF3I | CTNAG | 1 cut(s) | 183 |
| Hsp92II | CATG | 2 cut(s) | 17, 80 |
| Kzo9I | GATC | 2 cut(s) | 36, 252 |
| LpnPI | CCDG | 3 cut(s) | 47, 64, 155 |
| Lsp1109I | GCAGC | 1 cut(s) | 30 |
| LweI | GCATC | 1 cut(s) | 95 |
| MalI | GATC | 2 cut(s) | 38, 254 |
| MboI | GATC | 2 cut(s) | 36, 252 |
| MboII | GAAGA | 5 cut(s) | 22, 31, 34, 39, 65 |
| MluCI | AATT | 1 cut(s) | 274 |
| MmeI | TCCRAC | 1 cut(s) | 114 |
| MnlI | CCTC | 7 cut(s) | 138, 145, 166, 174, 242, 254, 257 |
| Mph1103I | ATGCAT | 1 cut(s) | 82 |
| MslI | CAYNNNNRTG | 1 cut(s) | 228 |
| MspI | CCGG | 1 cut(s) | 142 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 234 |
| NdeII | GATC | 2 cut(s) | 36, 252 |
| NlaIII | CATG | 2 cut(s) | 17, 80 |
| NlaIV | GGNNCC | 1 cut(s) | 238 |
| NsiI | ATGCAT | 1 cut(s) | 82 |
| PkrI | GCNGC | 3 cut(s) | 20, 208, 211 |
| PspN4I | GGNNCC | 1 cut(s) | 238 |
| PstNI | CAGNNNCTG | 1 cut(s) | 24 |
| RsaI | GTAC | 2 cut(s) | 181, 282 |
| RsaNI | GTAC | 2 cut(s) | 180, 281 |
| RseI | CAYNNNNRTG | 1 cut(s) | 228 |
| SatI | GCNGC | 3 cut(s) | 19, 207, 210 |
| Sau3AI | GATC | 2 cut(s) | 36, 252 |
| ScaI | AGTACT | 1 cut(s) | 181 |
| SetI | ASST | 2 cut(s) | 23, 100 |
| SfaNI | GCATC | 1 cut(s) | 95 |
| SgeI | CNNG | 9 cut(s) | 26, 46, 63, 89, 107, 125, 154, 177, 182 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 228 |
| Sse9I | AATT | 1 cut(s) | 274 |
| SsiI | CCGC | 2 cut(s) | 207, 210 |
| SspI | AATATT | 1 cut(s) | 70 |
| TasI | AATT | 1 cut(s) | 274 |
| TatI | WGTACW | 1 cut(s) | 179 |
| TauI | GCSGC | 2 cut(s) | 209, 212 |
| TscAI | CASTG | 1 cut(s) | 235 |
| TseI | GCWGC | 1 cut(s) | 18 |
| TspDTI | ATGAA | 2 cut(s) | 65, 143 |
| TspRI | CASTG | 1 cut(s) | 235 |
| XapI | RAATTY | 1 cut(s) | 274 |
| ZrmI | AGTACT | 1 cut(s) | 181 |
| Zsp2I | ATGCAT | 1 cut(s) | 82 |