Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0015974

Physical Location & Seq

Genomic Coordinates Reverse (-)

56333940 .. 56344657

Gene Structure 10718 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00206520.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2244 bp

ATGTTGAGACAGTATGGATTATACCAAGTACAGAAAGGGTCAGGCAATGATACAATTTCAGCAACAGTAGACTATTTCCCCGCTGCTGTCGATGTCGAGGTCGTCAGGATCTGTATCAAGATCCTCCTCCATGTTGTCGATGTCCAGGCTGCCAGCAAGATACTGGTTGAGATTGAATTGAGTACTGGACACTCGAATCACCAGAGATCTGTCCTAGCTTTGTTGACAAAAGAGCTGCCGTCGCATAAGTCCGGGACTTTGATTCGGATTCTCAATGCCCAGAAGAAGTGGATGAGGCAAGAGGACGCCACCTATGTCGCCGTGCATTGTATGCGAATTCGCGAGAACGAAGCCGGATTCCGGGTGTATAAATGGATGATGCCACACAAGTGGTACCGATTTGATTTTGCTCTTGCTACCAAGTTGGCGGATTATATGGGGAAAGAGAGGAAATTTGCGAAATGTAGGGAGATTTTTGATGATATAATTAAGCAGGGGCGTGTGCCTAGTGAGTCTACGTTTCATATATTGGTTGTTGCATACCTTAGTGCTCCGGGTGAAGGTTGCTTGGAAGAAGCGTGTAGTGTTTACAATCGAATGATTCAGCTTGGAGGTTACCAGCCGCGGCTTAGCTTGCACAATTCTCTGTTTAAGGCTATTGTCAGCAAACCAGGGAGCTCTGCGAAACCTTATCTCAAACAGGCCGAGTTTATATTTCATAATTTGTTAACAACTGGACTTGAGATTCACAAGGACATTTACAGTGGCTTGATTTGGTTACATAGTTATCAGGATACTGTTGATACAGAGAGGATGACATCGTTGAGGAAAGAGATGCAAGAAGCAGGGATTGAAGAGGGCAAAGAAGTGCTTGTGTCTATCTTGAGAGCGTGCTCAAAGAATGGGGATGTGGAGGAAGCAGAGAACACTTGGCTCAGACTTCTCAGTCTTAATGTAGGTCTTCCGTCACAGGCTTTTGTTTATAAGATGGAAGTGTATGCAAAGGTTGGAGAACCCAAGAAGTCTTTGGAGATATTCAGGGAGATGCAGGAGCACTTGGGTTCAGCCAATGTTGTGGCATATCATAAAGTCATAGAAATTGTCTGTAAAGCTAAAGAAATTGAACTTGCAGAATCCCTTATGGCAGATTTCATCAACACTGGTTTGAAGCCTTCCATGCCAGCTTATATAGATCTAATGAACATGTACTTCAACTTGAGCTTATATGACAAAGTGGAATCGGCCTTCTCCCAATGCCTTGAGATATGTCGACCTAGCAGAACGGTTTACTGTATATACTTGGATTCTTTGGTGAAAGTTCGTAATCTTGATAAAGCTGAGGAGATATTCGACTACATGCAGAGTAATGGGGCAATAGGTATTAATGCCCGTTCCTGCAATACCATATTAAGTGGATACTTGTCAGCTGGAGATGATTTCAAGGCAGAGAAAATATATAGTCTGATGTGTCAGAAGAAATATGATGTTGATCCTCCATTGATGGAAATAATCAACTCTTTCTTGAGTTTGAGAAAGAAACAGGTTAAGAGACATATAAGCATGACGCTGAGCAAAGAACAACGAGAGATACTAGTTGGTCTACTGCTGGGTGGTTTGCAGATCGAATCAGATGACGACAGAAAGAATCACATGATCCGTTTTGAGTTCAGTGAGAATTCTAGTGCACATTCTGTTTTGAGGAGACATATATATGATCAATACCATGAATGGCTCCATCCTTCGTGTAAGCCCAGTGAGAATACTGAGTACATACCATATAAATTTTCCAGCATCTCACATTCTTATTTTGGTTTCTATGCCAACCAGTTTTGGCCCAATGGCCGGCGGATGATTCCCAAACTAGTCCACAGATGGCTCTCACCATGTGTTCTTGCATACTGGTATATGTATGGGGGCTACAGGACTGCATCGGGAGACATATTGCTGAAAATAAAGGGAAGTGAGGAGGGTGTTCAGAAGATTGTCAGAACCTTGAAGGCAATGTCTCTGGAGTGCAAGGTGAAGAGGAAGGGGAGAGTGTTTTGGATAGGTTTCCTGGGAAGTAATTCTACACTGTTCGGGAAACTAACGGAGCCTTACATTCTAGATGACTTGAAACATCTTCTAAAATCGGATGGGGAAAGCTCAGAGAACAATACAGTTGAAAATGAAAACATCAACTTCACTAGTGGGTCTGACACCGATGAGAATGCCTCTGATAATAGTGATGATGATAGGAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000373 GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006091 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0015979 GO:0016043 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0019684 GO:0022607 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0045292 GO:0046483 GO:0048564 GO:0065003 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LAGLIDADG_2 PPR

Protein Analysis

747

Amino Acids

85.44

Weight (kDa)

7.29

Isoelectric Point (pI)

45.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LAGLIDADG_2	PF03161	528 - 693	1.8e-51	LAGLIDADG DNA endonuclease family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015974)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G15820
fragaria_vesca	FvH4_2g06900
malus_domestica	MD10G1089000.v1.1
prunus_persica	Prupe.8G116000_v2.0.a1
pyrus_communis	pycom10g07190
rosa_chinensis	RchiOBHm_Chr6g0259211
rosa_laevigata	RLG00000014548
rosa_multiflora	Rmu_ssc0000050.1_g000094
rosa_roxburghii	Rroxscaffold_7G00206520
rosa_rugosa	Rorug05G0586000
rosa_samantha	Rh6AG102900 Rh6BG095200 Rh6CG092100 Rh6DG086100
rosa_wichuraiana	Rw6G008880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	984
AasI	GACNNNNNNGTC	1 cut(s)	945
Acc65I	GGTACC	1 cut(s)	393
AccB1I	GGYRCC	1 cut(s)	393
AccI	GTMKAC	4 cut(s)	69, 515, 1270, 1600
AccII	CGCG	2 cut(s)	342, 625
AciI	CCGC	5 cut(s)	81, 428, 623, 625, 1846
AclWI	GGATC	4 cut(s)	115, 116, 1484, 1648
AcoI	YGGCCR	1 cut(s)	1840
AcsI	RAATTY	4 cut(s)	336, 452, 1675, 1781
AcyI	GRCGYC	1 cut(s)	306
AdeI	CACNNNGTG	1 cut(s)	1886
AfaI	GTAC	5 cut(s)	30, 184, 395, 1208, 1769
AfiI	CCNNNNNNNGG	3 cut(s)	360, 560, 1842
AflIII	ACRYGT	1 cut(s)	1203
AgsI	TTSAA	9 cut(s)	176, 854, 1124, 1168, 1213, 1441, 1996, 2116, 2165
AhlI	ACTAGT	3 cut(s)	1591, 1861, 2186
AjnI	CCWGG	3 cut(s)	144, 670, 2055
AleI	CACNNNNGTG	1 cut(s)	388
Alw21I	GWGCWC	5 cut(s)	553, 680, 896, 1056, 1687
Alw26I	GTCTC	4 cut(s)	1543, 1696, 1929, 2010
Alw44I	GTGCAC	1 cut(s)	1683
AlwI	GGATC	4 cut(s)	115, 116, 1484, 1648
AlwNI	CAGNNNCTG	1 cut(s)	111
AoxI	GGCC	4 cut(s)	702, 1242, 1832, 1840
ApaLI	GTGCAC	1 cut(s)	1683
ApeKI	GCWGC	3 cut(s)	83, 149, 235
ApoI	RAATTY	4 cut(s)	336, 452, 1675, 1781
AseI	ATTAAT	1 cut(s)	1383
Asp700I	GAANNNNTTC	1 cut(s)	2065
Asp718I	GGTACC	1 cut(s)	393
AspS9I	GGNCC	1 cut(s)	1833
AsuC2I	CCSGG	3 cut(s)	253, 362, 555
AsuHPI	GGTGA	5 cut(s)	191, 569, 1324, 1872, 2032
BaeGI	GKGCMC	1 cut(s)	1687
BanI	GGYRCC	1 cut(s)	393
BanII	GRGCYC	1 cut(s)	680
BarI	GAAGNNNNNNTAC	2 cut(s)	2053, 2085
BbsI	GAAGAC	1 cut(s)	953
Bbv12I	GWGCWC	5 cut(s)	553, 680, 896, 1056, 1687
BbvCI	CCTCAGC	1 cut(s)	1338
BbvI	GCAGC	3 cut(s)	70, 136, 222
BccI	CCATC	5 cut(s)	982, 1495, 1743, 1866, 2129
BceAI	ACGGC	2 cut(s)	223, 305
BcgI	CGANNNNNNTGC	2 cut(s)	2192, 2226
BciT130I	CCWGG	3 cut(s)	146, 672, 2057
BciVI	GTATCC	2 cut(s)	787, 1409
BclI	TGATCA	1 cut(s)	1714
BcnI	CCSGG	3 cut(s)	253, 362, 555
BcoDI	GTCTC	4 cut(s)	1543, 1696, 1929, 2010
BcuI	ACTAGT	3 cut(s)	1591, 1861, 2186
BfaI	CTAG	8 cut(s)	215, 507, 1275, 1592, 1680, 1862, 2105, 2187
BfmI	CTRYAG	1 cut(s)	1918
BfuI	GTATCC	2 cut(s)	787, 1409
BglII	AGATCT	2 cut(s)	206, 1192
BisI	GCNGC	5 cut(s)	84, 150, 236, 623, 626
BlpI	GCTNAGC	2 cut(s)	629, 1568
BlsI	GCNGC	5 cut(s)	85, 151, 237, 624, 627
BmcAI	AGTACT	1 cut(s)	184
Bme1390I	CCNGG	6 cut(s)	146, 253, 362, 555, 672, 2057
BmgT120I	GGNCC	1 cut(s)	1833
BmiI	GGNNCC	3 cut(s)	395, 1733, 2094
BmrFI	CCNGG	6 cut(s)	146, 253, 362, 555, 672, 2057
BmrI	ACTGGG	1 cut(s)	1746
BmsI	GCATC	5 cut(s)	369, 825, 1035, 1800, 1937
BmuI	ACTGGG	1 cut(s)	1746
BpiI	GAAGAC	1 cut(s)	953
BplI	GAGNNNNNCTC	2 cut(s)	2198, 2230
BpmI	CTGGAG	2 cut(s)	1449, 2030
Bpu10I	CCTNAGC	1 cut(s)	1338
Bpu1102I	GCTNAGC	2 cut(s)	629, 1568
BpuEI	CTTGAG	5 cut(s)	761, 904, 1237, 1280, 1543
BpuMI	CCSGG	3 cut(s)	253, 362, 555
BsaBI	GATNNNNATC	2 cut(s)	113, 1488
BsaHI	GRCGYC	1 cut(s)	306
BsaJI	CCNNGG	3 cut(s)	623, 671, 2056
Bsc4I	CCNNNNNNNGG	3 cut(s)	360, 560, 1842
Bse118I	RCCGGY	1 cut(s)	1842
Bse1I	ACTGG	7 cut(s)	168, 190, 739, 1165, 1752, 1825, 1904
Bse3DI	GCAATG	2 cut(s)	52, 2007
Bse8I	GATNNNNATC	2 cut(s)	113, 1488
BseBI	CCWGG	3 cut(s)	146, 672, 2057
BseDI	CCNNGG	3 cut(s)	623, 671, 2056
BseGI	GGATG	7 cut(s)	297, 381, 819, 913, 1735, 1854, 2140
BseJI	GATNNNNATC	2 cut(s)	113, 1488
BseLI	CCNNNNNNNGG	3 cut(s)	360, 560, 1842
BseMI	GCAATG	2 cut(s)	52, 2007
BseMII	CTCAG	6 cut(s)	949, 958, 1329, 1559, 1755, 2160
BseNI	ACTGG	7 cut(s)	168, 190, 739, 1165, 1752, 1825, 1904
BseRI	GAGGAG	4 cut(s)	116, 1355, 1714, 1979
BseSI	GKGCMC	1 cut(s)	1687
BseXI	GCAGC	3 cut(s)	70, 136, 222
BseYI	CCCAGC	1 cut(s)	1606
Bsh1236I	CGCG	2 cut(s)	342, 625
BshFI	GGCC	4 cut(s)	704, 1244, 1834, 1842
BshNI	GGYRCC	1 cut(s)	393
BsiHKAI	GWGCWC	5 cut(s)	553, 680, 896, 1056, 1687
BsiSI	CCGG	5 cut(s)	252, 354, 361, 554, 1843
BslFI	GGGAC	1 cut(s)	268
BslI	CCNNNNNNNGG	3 cut(s)	360, 560, 1842
BsmAI	GTCTC	4 cut(s)	1543, 1696, 1929, 2010
BsmFI	GGGAC	1 cut(s)	268
BsmI	GAATGC	1 cut(s)	2215
BsnI	GGCC	4 cut(s)	704, 1244, 1834, 1842
Bsp1286I	GDGCHC	5 cut(s)	553, 680, 896, 1056, 1687
Bsp143I	GATC	8 cut(s)	108, 120, 206, 1192, 1489, 1620, 1653, 1714
Bsp1720I	GCTNAGC	2 cut(s)	629, 1568
Bsp68I	TCGCGA	1 cut(s)	342
BspACI	CCGC	5 cut(s)	81, 428, 623, 625, 1846
BspANI	GGCC	4 cut(s)	704, 1244, 1834, 1842
BspCNI	CTCAG	6 cut(s)	948, 957, 1330, 1560, 1756, 2159
BspFNI	CGCG	2 cut(s)	342, 625
BspLI	GGNNCC	3 cut(s)	395, 1733, 2094
BspPI	GGATC	4 cut(s)	115, 116, 1484, 1648
BspT107I	GGYRCC	1 cut(s)	393
BsrDI	GCAATG	2 cut(s)	52, 2007
BsrFI	RCCGGY	1 cut(s)	1842
BsrI	ACTGG	7 cut(s)	168, 190, 739, 1165, 1752, 1825, 1904
BssAI	RCCGGY	1 cut(s)	1842
BssECI	CCNNGG	3 cut(s)	623, 671, 2056
BssMI	GATC	8 cut(s)	108, 120, 206, 1192, 1489, 1620, 1653, 1714
BssNI	GRCGYC	1 cut(s)	306
Bst2UI	CCWGG	3 cut(s)	146, 672, 2057
Bst4CI	ACNGT	8 cut(s)	12, 67, 764, 799, 1285, 1292, 2076, 2161
Bst6I	CTCTTC	2 cut(s)	849, 2018
BstACI	GRCGYC	1 cut(s)	306
BstAPI	GCANNNNNTGC	1 cut(s)	331
BstC8I	GCNNGC	5 cut(s)	154, 635, 892, 1182, 1844
BstDEI	CTNAG	8 cut(s)	545, 629, 935, 944, 1338, 1568, 1764, 2146
BstDSI	CCRYGG	1 cut(s)	623
BstEII	GGTNACC	1 cut(s)	614
BstF5I	GGATG	7 cut(s)	297, 381, 819, 913, 1735, 1854, 2140
BstFNI	CGCG	2 cut(s)	342, 625
BstKTI	GATC	8 cut(s)	111, 123, 209, 1195, 1492, 1623, 1656, 1717
BstMAI	GTCTC	4 cut(s)	1543, 1696, 1929, 2010
BstMBI	GATC	8 cut(s)	108, 120, 206, 1192, 1489, 1620, 1653, 1714
BstMWI	GCNNNNNNNGC	4 cut(s)	241, 331, 634, 1177
BstNI	CCWGG	3 cut(s)	146, 672, 2057
BstNSI	RCATGY	2 cut(s)	1207, 1360
BstPI	GGTNACC	1 cut(s)	614
BstSCI	CCNGG	6 cut(s)	144, 251, 360, 553, 670, 2055
BstSFI	CTRYAG	1 cut(s)	1918
BstSLI	GKGCMC	1 cut(s)	1687
BstUI	CGCG	2 cut(s)	342, 625
BstV1I	GCAGC	3 cut(s)	70, 136, 222
BstV2I	GAAGAC	1 cut(s)	953
BstX2I	RGATCY	4 cut(s)	108, 120, 206, 1192
BstXI	CCANNNNNNTGG	2 cut(s)	390, 1075
BstYI	RGATCY	4 cut(s)	108, 120, 206, 1192
BsuI	GTATCC	2 cut(s)	787, 1409
BsuRI	GGCC	4 cut(s)	704, 1244, 1834, 1842
BtgI	CCRYGG	1 cut(s)	623
BtsCI	GGATG	7 cut(s)	297, 381, 819, 913, 1735, 1854, 2140
BtsIMutI	CAGTG	5 cut(s)	769, 1158, 1675, 1759, 2072
BtuMI	TCGCGA	1 cut(s)	342
Cac8I	GCNNGC	5 cut(s)	154, 635, 892, 1182, 1844
CaiI	CAGNNNCTG	1 cut(s)	111
Cfr10I	RCCGGY	1 cut(s)	1842
Cfr13I	GGNCC	1 cut(s)	1833
Cfr42I	CCGCGG	1 cut(s)	626
CseI	GACGC	2 cut(s)	314, 1573
Csp6I	GTAC	5 cut(s)	29, 183, 394, 1207, 1768
CviAII	CATG	8 cut(s)	131, 1177, 1204, 1357, 1561, 1651, 1724, 1884
CviQI	GTAC	5 cut(s)	29, 183, 394, 1207, 1768
DdeI	CTNAG	8 cut(s)	545, 629, 935, 944, 1338, 1568, 1764, 2146
DpnI	GATC	8 cut(s)	110, 122, 208, 1194, 1491, 1622, 1655, 1716
DpnII	GATC	8 cut(s)	108, 120, 206, 1192, 1489, 1620, 1653, 1714
DraIII	CACNNNGTG	1 cut(s)	1886
DrdI	GACNNNNNNGTC	1 cut(s)	945
DseDI	GACNNNNNNGTC	1 cut(s)	945
EaeI	YGGCCR	1 cut(s)	1840
Eam1104I	CTCTTC	2 cut(s)	849, 2018
EarI	CTCTTC	2 cut(s)	849, 2018
EciI	GGCGGA	2 cut(s)	443, 1861
Ecl136II	GAGCTC	1 cut(s)	678
Eco24I	GRGCYC	1 cut(s)	680
Eco53kI	GAGCTC	1 cut(s)	678
Eco91I	GGTNACC	1 cut(s)	614
EcoICRI	GAGCTC	1 cut(s)	678
EcoO65I	GGTNACC	1 cut(s)	614
EcoRI	GAATTC	2 cut(s)	336, 1675
EcoRII	CCWGG	3 cut(s)	144, 670, 2055
EcoT38I	GRGCYC	1 cut(s)	680
FaeI	CATG	8 cut(s)	134, 1180, 1207, 1360, 1564, 1654, 1727, 1887
FalI	AAGNNNNNCTT	2 cut(s)	855, 887
FaqI	GGGAC	1 cut(s)	268
FatI	CATG	8 cut(s)	130, 1176, 1203, 1356, 1560, 1650, 1723, 1883
FauI	CCCGC	1 cut(s)	88
FbaI	TGATCA	1 cut(s)	1714
FblI	GTMKAC	4 cut(s)	69, 515, 1270, 1600
Fnu4HI	GCNGC	5 cut(s)	84, 150, 236, 623, 626
FokI	GGATG	7 cut(s)	304, 388, 826, 920, 1722, 1861, 2147
FriOI	GRGCYC	1 cut(s)	680
Fsp4HI	GCNGC	5 cut(s)	84, 150, 236, 623, 626
FspBI	CTAG	8 cut(s)	215, 507, 1275, 1592, 1680, 1862, 2105, 2187
GluI	GCNGC	5 cut(s)	84, 150, 236, 623, 626
GsaI	CCCAGC	1 cut(s)	1610
GsuI	CTGGAG	2 cut(s)	1449, 2030
HaeIII	GGCC	4 cut(s)	704, 1244, 1834, 1842
HapII	CCGG	5 cut(s)	252, 354, 361, 554, 1843
HgaI	GACGC	2 cut(s)	314, 1573
Hin1I	GRCGYC	1 cut(s)	306
Hin1II	CATG	8 cut(s)	134, 1180, 1207, 1360, 1564, 1654, 1727, 1887
HincII	GTYRAC	3 cut(s)	225, 729, 1271
HindII	GTYRAC	3 cut(s)	225, 729, 1271
HpaI	GTTAAC	1 cut(s)	729
HpaII	CCGG	5 cut(s)	252, 354, 361, 554, 1843
HphI	GGTGA	5 cut(s)	191, 569, 1324, 1872, 2032
Hpy99I	CGWCG	1 cut(s)	244
HpyAV	CCTTC	6 cut(s)	554, 1182, 1255, 1749, 1990, 2023
HpyCH4III	ACNGT	8 cut(s)	12, 67, 764, 799, 1285, 1292, 2076, 2161
HpyCH4IV	ACGT	1 cut(s)	518
HpyF10VI	GCNNNNNNNGC	4 cut(s)	241, 331, 634, 1177
HpyF3I	CTNAG	8 cut(s)	545, 629, 935, 944, 1338, 1568, 1764, 2146
HpySE526I	ACGT	1 cut(s)	518
Hsp92I	GRCGYC	1 cut(s)	306
Hsp92II	CATG	8 cut(s)	134, 1180, 1207, 1360, 1564, 1654, 1727, 1887
KpnI	GGTACC	1 cut(s)	397
KroI	GCCGGC	1 cut(s)	1842
KroNI	GCCGGC	1 cut(s)	1844
Ksp22I	TGATCA	1 cut(s)	1714
KspAI	GTTAAC	1 cut(s)	729
KspI	CCGCGG	1 cut(s)	626
Kzo9I	GATC	8 cut(s)	108, 120, 206, 1192, 1489, 1620, 1653, 1714
LmnI	GCTCC	5 cut(s)	556, 675, 1051, 1737, 2092
Lsp1109I	GCAGC	3 cut(s)	70, 136, 222
LweI	GCATC	5 cut(s)	369, 825, 1035, 1800, 1937
MaeI	CTAG	8 cut(s)	215, 507, 1275, 1592, 1680, 1862, 2105, 2187
MaeII	ACGT	1 cut(s)	518
MaeIII	GTNAC	3 cut(s)	614, 777, 966
MalI	GATC	8 cut(s)	110, 122, 208, 1194, 1491, 1622, 1655, 1716
MboI	GATC	8 cut(s)	108, 120, 206, 1192, 1489, 1620, 1653, 1714
MboII	GAAGA	8 cut(s)	295, 584, 866, 953, 1486, 1990, 2035, 2114
MflI	RGATCY	4 cut(s)	108, 120, 206, 1192
MhlI	GDGCHC	5 cut(s)	553, 680, 896, 1056, 1687
MlyI	GAGTC	1 cut(s)	521
MmeI	TCCRAC	1 cut(s)	988
MroNI	GCCGGC	1 cut(s)	1842
MroXI	GAANNNNTTC	1 cut(s)	2065
MseI	TTAA	8 cut(s)	489, 651, 728, 951, 1383, 1409, 1545, 2242
MslI	CAYNNNNRTG	2 cut(s)	388, 1710
MspA1I	CMGCKG	3 cut(s)	83, 625, 1427
MspI	CCGG	5 cut(s)	252, 354, 361, 554, 1843
MspR9I	CCNGG	6 cut(s)	146, 253, 362, 555, 672, 2057
Mva1269I	GAATGC	1 cut(s)	2215
MvaI	CCWGG	3 cut(s)	146, 672, 2057
MvnI	CGCG	2 cut(s)	342, 625
MwoI	GCNNNNNNNGC	4 cut(s)	241, 331, 634, 1177
NaeI	GCCGGC	1 cut(s)	1844
NciI	CCSGG	3 cut(s)	253, 362, 555
NdeII	GATC	8 cut(s)	108, 120, 206, 1192, 1489, 1620, 1653, 1714
NgoMIV	GCCGGC	1 cut(s)	1842
NlaIII	CATG	8 cut(s)	134, 1180, 1207, 1360, 1564, 1654, 1727, 1887
NlaIV	GGNNCC	3 cut(s)	395, 1733, 2094
NmeAIII	GCCGAG	1 cut(s)	730
NmuCI	GTSAC	1 cut(s)	966
NruI	TCGCGA	1 cut(s)	342
NspI	RCATGY	2 cut(s)	1207, 1360
OliI	CACNNNNGTG	1 cut(s)	388
PciI	ACATGT	1 cut(s)	1203
PctI	GAATGC	1 cut(s)	2215
PdiI	GCCGGC	1 cut(s)	1844
PdmI	GAANNNNTTC	1 cut(s)	2065
PfoI	TCCNGGA	1 cut(s)	251
PkrI	GCNGC	5 cut(s)	85, 151, 237, 624, 627
PleI	GAGTC	1 cut(s)	520
PpsI	GAGTC	1 cut(s)	520
PscI	ACATGT	1 cut(s)	1203
PshBI	ATTAAT	1 cut(s)	1383
PsiI	TTATAA	1 cut(s)	984
Psp124BI	GAGCTC	1 cut(s)	680
Psp6I	CCWGG	3 cut(s)	144, 670, 2055
PspEI	GGTNACC	1 cut(s)	614
PspFI	CCCAGC	1 cut(s)	1606
PspGI	CCWGG	3 cut(s)	144, 670, 2055
PspN4I	GGNNCC	3 cut(s)	395, 1733, 2094
PspPI	GGNCC	1 cut(s)	1833
PstNI	CAGNNNCTG	1 cut(s)	111
PsuI	RGATCY	4 cut(s)	108, 120, 206, 1192
PvuII	CAGCTG	1 cut(s)	1427
RruI	TCGCGA	1 cut(s)	342
RsaI	GTAC	5 cut(s)	30, 184, 395, 1208, 1769
RsaNI	GTAC	5 cut(s)	29, 183, 394, 1207, 1768
RseI	CAYNNNNRTG	2 cut(s)	388, 1710
SacI	GAGCTC	1 cut(s)	680
SacII	CCGCGG	1 cut(s)	626
SalI	GTCGAC	1 cut(s)	1269
SaqAI	TTAA	8 cut(s)	489, 651, 728, 951, 1383, 1409, 1545, 2242
SatI	GCNGC	5 cut(s)	84, 150, 236, 623, 626
Sau3AI	GATC	8 cut(s)	108, 120, 206, 1192, 1489, 1620, 1653, 1714
Sau96I	GGNCC	1 cut(s)	1833
ScaI	AGTACT	1 cut(s)	184
SchI	GAGTC	1 cut(s)	521
ScrFI	CCNGG	6 cut(s)	146, 253, 362, 555, 672, 2057
SduI	GDGCHC	5 cut(s)	553, 680, 896, 1056, 1687
SfaNI	GCATC	5 cut(s)	369, 825, 1035, 1800, 1937
SfcI	CTRYAG	1 cut(s)	1918
Sfr303I	CCGCGG	1 cut(s)	626
SgrBI	CCGCGG	1 cut(s)	626
SmiMI	CAYNNNNRTG	2 cut(s)	388, 1710
SmlI	CTYRAG	5 cut(s)	740, 883, 1216, 1259, 1522
SmoI	CTYRAG	5 cut(s)	740, 883, 1216, 1259, 1522
SpeI	ACTAGT	3 cut(s)	1591, 1861, 2186
SsiI	CCGC	5 cut(s)	81, 428, 623, 625, 1846
SspMI	CTAG	8 cut(s)	215, 507, 1275, 1592, 1680, 1862, 2105, 2187
SstI	GAGCTC	1 cut(s)	680
StyD4I	CCNGG	6 cut(s)	144, 251, 360, 553, 670, 2055
TaaI	ACNGT	8 cut(s)	12, 67, 764, 799, 1285, 1292, 2076, 2161
TaiI	ACGT	1 cut(s)	521
TaqI	TCGA	8 cut(s)	90, 96, 138, 194, 595, 1270, 1350, 1623
TatI	WGTACW	4 cut(s)	28, 182, 1206, 1767
TauI	GCSGC	2 cut(s)	625, 628
Tru1I	TTAA	8 cut(s)	489, 651, 728, 951, 1383, 1409, 1545, 2242
Tru9I	TTAA	8 cut(s)	489, 651, 728, 951, 1383, 1409, 1545, 2242
TscAI	CASTG	5 cut(s)	769, 1165, 1675, 1759, 2079
TseFI	GTSAC	1 cut(s)	966
TseI	GCWGC	3 cut(s)	83, 149, 235
Tsp45I	GTSAC	1 cut(s)	966
TspDTI	ATGAA	6 cut(s)	512, 707, 1141, 1214, 1740, 2184
TspGWI	ACGGA	3 cut(s)	954, 1646, 2105
TspRI	CASTG	5 cut(s)	769, 1165, 1675, 1759, 2079
VneI	GTGCAC	1 cut(s)	1683
VspI	ATTAAT	1 cut(s)	1383
XapI	RAATTY	4 cut(s)	336, 452, 1675, 1781
XbaI	TCTAGA	1 cut(s)	2104
XceI	RCATGY	2 cut(s)	1207, 1360
XcmI	CCANNNNNNNNNTGG	2 cut(s)	160, 1024
XmiI	GTMKAC	4 cut(s)	69, 515, 1270, 1600
XmnI	GAANNNNTTC	1 cut(s)	2065
XspI	CTAG	8 cut(s)	215, 507, 1275, 1592, 1680, 1862, 2105, 2187
ZrmI	AGTACT	1 cut(s)	184

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.