Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0014818

Physical Location & Seq

Genomic Coordinates Reverse (-)

16835261 .. 16837575

Gene Structure 2315 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G158900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 915 bp

ATGGAGGGTTTGGTCATGACCCCAAATGAAGCTGATGAAAAATTGCCCAAATCAGCTGGCAGAAGTTGTGAGGCGGTTGGTGTCGAAAACTCACTGAGGCTAAAATTTCTTGCTACAATTGGTGCCCATGAATATTTTTCACCAGAGATGTGGAGAGCAGCTTTTACAGAATTAGTAGCAACAGCTTCTCTTCTGTTCACGCTGACCTCTTCAATCATCTCATGCTTGGAATCAGGAGAGGTTGATCCAAAGCTGCTTGTCCCAATTGCAGTCTTCATCATAGCCTTCCTCTTCCTCCTAGTCACAGTCCCTTTATCTGGAGGGCACATGAGCCCTGTCTTCACATTCATAGCTGCCCTCAAGGGTGTTATAACTTTTGCTAGGGCCTCCATCTACATTTTGGCACAATGCATTGGCTCAATCTTGGGATTTCTTATAATCAAGACTGTGATGGATCAAAATGCAGCACAAAAATATTCCTTAGGTGGCTGCACAATCAAGGGAAGTGGGTCCACATCTGGGGTGGGGACACAAACAGCATTGATGGTAGAATTTGCCTGCACATTTGTGGTTCTCTTTGTCGGGGTCACAGTGGCATTTGACAAGAGAAGGTGCAAAGAGTTGGGTTTGGCCATGGTGTGTGCTGTGGTAGCTGGGGCTATGGCACTTGCAGTTTTTGTGTCAATTACTGTGACTGGGCGGGTCGGATATGCGGGCGTGGGTCTGAGCCCGGCAAGGTGCTTAGGCCCAGCATTGTTGCAAGGGGGGAGGTTGTGGGATGGCCATTGGGTTTTCTGGGTTGGACCAATCTTGGCTTGTAGTGTGTACTATTGTGTCTCTTTAAACTTGCCCAATGAGGGTTTAAAATCTGTGGAAGAAGAGTGTGACATTCTGAAGGGAGAGGGCAATGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0016020

KEGG Pathways

Metabolic & Signaling

ko04962 ko04976 map04962 map04976

Pfam Domains

Protein Families

MIP

Protein Analysis

305

Amino Acids

32.15

Weight (kDa)

5.97

Isoelectric Point (pI)

38.35

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014818)

Species	Orthologous Gene IDs
malus_domestica	MD05G1114500.v1.1
prunus_persica	Prupe.8G158900_v2.0.a1
pyrus_communis	pycom05g10930
rosa_chinensis	RchiOBHm_Chr6g0245851 RchiOBHm_Chr6g0245871
rosa_laevigata	RLG00000015293
rosa_multiflora	Rmu_sc0005570.1_g000016 Rmu_sc0008277.1_g000007
rosa_rugosa	Rorug05G0516300
rosa_samantha	Rh6AG030900 Rh6AG031200 Rh6BG027700 Rh6CG027200 Rh6CG027500 Rh6DG026400 Rh6DG026600
rosa_wichuraiana	Rw6G002610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	371, 437
AccB1I	GGYRCC	1 cut(s)	122
AciI	CCGC	3 cut(s)	74, 700, 713
AclWI	GGATC	2 cut(s)	239, 462
AcoI	YGGCCR	2 cut(s)	630, 781
AcsI	RAATTY	2 cut(s)	104, 551
AcuI	CTGAAG	1 cut(s)	914
AfaI	GTAC	1 cut(s)	827
AfiI	CCNNNNNNNGG	3 cut(s)	317, 519, 857
AgsI	TTSAA	1 cut(s)	213
AleI	CACNNNNGTG	1 cut(s)	566
AluBI	AGCT	7 cut(s)	32, 56, 161, 185, 253, 353, 653
AluI	AGCT	7 cut(s)	32, 56, 161, 185, 253, 353, 653
Alw26I	GTCTC	1 cut(s)	841
AlwI	GGATC	2 cut(s)	239, 462
AoxI	GGCC	4 cut(s)	384, 630, 745, 781
ApeKI	GCWGC	5 cut(s)	158, 253, 353, 464, 489
ApoI	RAATTY	2 cut(s)	104, 551
AspS9I	GGNCC	4 cut(s)	384, 510, 746, 803
AsuC2I	CCSGG	1 cut(s)	731
AsuHPI	GGTGA	1 cut(s)	132
AvaII	GGWCC	2 cut(s)	510, 803
AxyI	CCTNAGG	1 cut(s)	481
BaeGI	GKGCMC	2 cut(s)	127, 327
BalI	TGGCCA	2 cut(s)	632, 783
BanI	GGYRCC	1 cut(s)	122
BanII	GRGCYC	2 cut(s)	335, 731
BbsI	GAAGAC	2 cut(s)	265, 331
BbvI	GCAGC	5 cut(s)	170, 240, 340, 476, 476
BccI	CCATC	4 cut(s)	398, 445, 538, 773
BcnI	CCSGG	1 cut(s)	731
BcoDI	GTCTC	1 cut(s)	841
BfaI	CTAG	2 cut(s)	299, 381
BisI	GCNGC	5 cut(s)	159, 254, 354, 465, 490
BlsI	GCNGC	5 cut(s)	160, 255, 355, 466, 491
Bme1390I	CCNGG	1 cut(s)	731
Bme18I	GGWCC	2 cut(s)	510, 803
BmgT120I	GGNCC	4 cut(s)	384, 510, 746, 803
BmiI	GGNNCC	2 cut(s)	124, 511
BmrFI	CCNGG	1 cut(s)	731
BmrI	ACTGGG	1 cut(s)	705
BmuI	ACTGGG	1 cut(s)	705
BpiI	GAAGAC	2 cut(s)	265, 331
BpmI	CTGGAG	1 cut(s)	339
Bpu10I	CCTNAGC	1 cut(s)	742
BpuEI	CTTGAG	1 cut(s)	344
BpuMI	CCSGG	1 cut(s)	731
BsaJI	CCNNGG	1 cut(s)	633
Bsc4I	CCNNNNNNNGG	3 cut(s)	317, 519, 857
Bse1I	ACTGG	1 cut(s)	700
Bse21I	CCTNAGG	1 cut(s)	481
Bse3DI	GCAATG	1 cut(s)	913
BseDI	CCNNGG	1 cut(s)	633
BseGI	GGATG	1 cut(s)	784
BseLI	CCNNNNNNNGG	3 cut(s)	317, 519, 857
BseMI	GCAATG	1 cut(s)	913
BseMII	CTCAG	2 cut(s)	86, 716
BseNI	ACTGG	1 cut(s)	700
BseSI	GKGCMC	2 cut(s)	127, 327
BseXI	GCAGC	5 cut(s)	170, 240, 340, 476, 476
BseYI	CCCAGC	2 cut(s)	653, 748
BsgI	GTGCAG	2 cut(s)	475, 544
BshFI	GGCC	4 cut(s)	386, 632, 747, 783
BshNI	GGYRCC	1 cut(s)	122
BsiSI	CCGG	1 cut(s)	731
BslFI	GGGAC	3 cut(s)	245, 293, 541
BslI	CCNNNNNNNGG	3 cut(s)	317, 519, 857
BsmAI	GTCTC	1 cut(s)	841
BsmFI	GGGAC	3 cut(s)	245, 293, 541
BsnI	GGCC	4 cut(s)	386, 632, 747, 783
Bsp1286I	GDGCHC	4 cut(s)	127, 327, 335, 731
Bsp143I	GATC	2 cut(s)	244, 454
Bsp19I	CCATGG	1 cut(s)	633
BspACI	CCGC	3 cut(s)	74, 700, 713
BspANI	GGCC	4 cut(s)	386, 632, 747, 783
BspCNI	CTCAG	2 cut(s)	87, 717
BspHI	TCATGA	1 cut(s)	15
BspLI	GGNNCC	2 cut(s)	124, 511
BspPI	GGATC	2 cut(s)	239, 462
BspT107I	GGYRCC	1 cut(s)	122
BsrDI	GCAATG	1 cut(s)	913
BsrI	ACTGG	1 cut(s)	700
BssECI	CCNNGG	1 cut(s)	633
BssMI	GATC	2 cut(s)	244, 454
BssT1I	CCWWGG	1 cut(s)	633
Bst4CI	ACNGT	4 cut(s)	307, 448, 592, 691
Bst6I	CTCTTC	4 cut(s)	195, 214, 296, 873
BstC8I	GCNNGC	3 cut(s)	58, 559, 715
BstDEI	CTNAG	4 cut(s)	95, 481, 725, 742
BstDSI	CCRYGG	1 cut(s)	633
BstF5I	GGATG	1 cut(s)	784
BstKTI	GATC	2 cut(s)	247, 457
BstMAI	GTCTC	1 cut(s)	841
BstMBI	GATC	2 cut(s)	244, 454
BstMWI	GCNNNNNNNGC	1 cut(s)	650
BstSCI	CCNGG	1 cut(s)	729
BstSLI	GKGCMC	2 cut(s)	127, 327
BstV1I	GCAGC	5 cut(s)	170, 240, 340, 476, 476
BstV2I	GAAGAC	2 cut(s)	265, 331
BstXI	CCANNNNNNTGG	1 cut(s)	150
Bsu36I	CCTNAGG	1 cut(s)	481
BsuRI	GGCC	4 cut(s)	386, 632, 747, 783
BtgI	CCRYGG	1 cut(s)	633
BtsCI	GGATG	1 cut(s)	784
BtsIMutI	CAGTG	2 cut(s)	92, 597
Cac8I	GCNNGC	3 cut(s)	58, 559, 715
CciI	TCATGA	1 cut(s)	15
Cfr13I	GGNCC	4 cut(s)	384, 510, 746, 803
Csp6I	GTAC	1 cut(s)	826
CspCI	CAANNNNNGTGG	2 cut(s)	487, 522
CviAII	CATG	5 cut(s)	16, 128, 222, 328, 634
CviQI	GTAC	1 cut(s)	826
DdeI	CTNAG	4 cut(s)	95, 481, 725, 742
DpnI	GATC	2 cut(s)	246, 456
DpnII	GATC	2 cut(s)	244, 454
DraI	TTTAAA	2 cut(s)	843, 864
EaeI	YGGCCR	2 cut(s)	630, 781
Eam1104I	CTCTTC	4 cut(s)	195, 214, 296, 873
EarI	CTCTTC	4 cut(s)	195, 214, 296, 873
Eco130I	CCWWGG	1 cut(s)	633
Eco24I	GRGCYC	2 cut(s)	335, 731
Eco47I	GGWCC	2 cut(s)	510, 803
Eco57I	CTGAAG	1 cut(s)	914
Eco81I	CCTNAGG	1 cut(s)	481
EcoO109I	RGGNCCY	1 cut(s)	384
EcoT14I	CCWWGG	1 cut(s)	633
EcoT22I	ATGCAT	1 cut(s)	413
EcoT38I	GRGCYC	2 cut(s)	335, 731
ErhI	CCWWGG	1 cut(s)	633
FaeI	CATG	5 cut(s)	19, 131, 225, 331, 637
FaqI	GGGAC	3 cut(s)	245, 293, 541
FatI	CATG	5 cut(s)	15, 127, 221, 327, 633
FauI	CCCGC	2 cut(s)	693, 706
Fnu4HI	GCNGC	5 cut(s)	159, 254, 354, 465, 490
FokI	GGATG	1 cut(s)	791
FriOI	GRGCYC	2 cut(s)	335, 731
Fsp4HI	GCNGC	5 cut(s)	159, 254, 354, 465, 490
FspBI	CTAG	2 cut(s)	299, 381
GluI	GCNGC	5 cut(s)	159, 254, 354, 465, 490
GsaI	CCCAGC	2 cut(s)	657, 752
GsuI	CTGGAG	1 cut(s)	339
HaeIII	GGCC	4 cut(s)	386, 632, 747, 783
HapII	CCGG	1 cut(s)	731
Hin1II	CATG	5 cut(s)	19, 131, 225, 331, 637
HinfI	GANTC	1 cut(s)	230
HpaII	CCGG	1 cut(s)	731
HphI	GGTGA	1 cut(s)	132
Hpy166II	GTNNAC	3 cut(s)	198, 513, 826
Hpy188I	TCNGA	3 cut(s)	707, 726, 894
Hpy188III	TCNNGA	4 cut(s)	16, 234, 318, 442
Hpy8I	GTNNAC	3 cut(s)	198, 513, 826
HpyAV	CCTTC	3 cut(s)	295, 603, 889
HpyCH4III	ACNGT	4 cut(s)	307, 448, 592, 691
HpyCH4V	TGCA	8 cut(s)	269, 411, 464, 492, 561, 615, 671, 760
HpyF10VI	GCNNNNNNNGC	1 cut(s)	650
HpyF3I	CTNAG	4 cut(s)	95, 481, 725, 742
Hsp92II	CATG	5 cut(s)	19, 131, 225, 331, 637
Kzo9I	GATC	2 cut(s)	244, 454
Lsp1109I	GCAGC	5 cut(s)	170, 240, 340, 476, 476
MaeI	CTAG	2 cut(s)	299, 381
MaeIII	GTNAC	4 cut(s)	301, 586, 691, 884
MalI	GATC	2 cut(s)	246, 456
MboI	GATC	2 cut(s)	244, 454
MboII	GAAGA	7 cut(s)	182, 201, 265, 283, 331, 887, 890
MfeI	CAATTG	2 cut(s)	117, 264
MhlI	GDGCHC	4 cut(s)	127, 327, 335, 731
MlsI	TGGCCA	2 cut(s)	632, 783
MluCI	AATT	7 cut(s)	41, 104, 117, 170, 264, 551, 684
MluNI	TGGCCA	2 cut(s)	632, 783
MmeI	TCCRAC	2 cut(s)	685, 781
Mox20I	TGGCCA	2 cut(s)	632, 783
Mph1103I	ATGCAT	1 cut(s)	413
MscI	TGGCCA	2 cut(s)	632, 783
MseI	TTAA	2 cut(s)	842, 863
MslI	CAYNNNNRTG	1 cut(s)	566
Msp20I	TGGCCA	2 cut(s)	632, 783
MspA1I	CMGCKG	1 cut(s)	56
MspI	CCGG	1 cut(s)	731
MspR9I	CCNGG	1 cut(s)	731
MunI	CAATTG	2 cut(s)	117, 264
MwoI	GCNNNNNNNGC	1 cut(s)	650
NciI	CCSGG	1 cut(s)	731
NcoI	CCATGG	1 cut(s)	633
NdeII	GATC	2 cut(s)	244, 454
NlaIII	CATG	5 cut(s)	19, 131, 225, 331, 637
NlaIV	GGNNCC	2 cut(s)	124, 511
NmuCI	GTSAC	4 cut(s)	301, 586, 691, 884
NsiI	ATGCAT	1 cut(s)	413
OliI	CACNNNNGTG	1 cut(s)	566
PagI	TCATGA	1 cut(s)	15
PfeI	GAWTC	1 cut(s)	230
PkrI	GCNGC	5 cut(s)	160, 255, 355, 466, 491
PsiI	TTATAA	2 cut(s)	371, 437
PspFI	CCCAGC	2 cut(s)	653, 748
PspN4I	GGNNCC	2 cut(s)	124, 511
PspPI	GGNCC	4 cut(s)	384, 510, 746, 803
PvuII	CAGCTG	1 cut(s)	56
RsaI	GTAC	1 cut(s)	827
RsaNI	GTAC	1 cut(s)	826
RseI	CAYNNNNRTG	1 cut(s)	566
SaqAI	TTAA	2 cut(s)	842, 863
SatI	GCNGC	5 cut(s)	159, 254, 354, 465, 490
Sau3AI	GATC	2 cut(s)	244, 454
Sau96I	GGNCC	4 cut(s)	384, 510, 746, 803
ScrFI	CCNGG	1 cut(s)	731
SduI	GDGCHC	4 cut(s)	127, 327, 335, 731
SinI	GGWCC	2 cut(s)	510, 803
SmiMI	CAYNNNNRTG	1 cut(s)	566
SmlI	CTYRAG	1 cut(s)	359
SmoI	CTYRAG	1 cut(s)	359
Sse9I	AATT	7 cut(s)	41, 104, 117, 170, 264, 551, 684
SsiI	CCGC	3 cut(s)	74, 700, 713
SspI	AATATT	2 cut(s)	134, 476
SspMI	CTAG	2 cut(s)	299, 381
StyD4I	CCNGG	1 cut(s)	729
StyI	CCWWGG	1 cut(s)	633
TaaI	ACNGT	4 cut(s)	307, 448, 592, 691
TaqI	TCGA	1 cut(s)	84
TasI	AATT	7 cut(s)	41, 104, 117, 170, 264, 551, 684
TatI	WGTACW	1 cut(s)	825
TfiI	GAWTC	1 cut(s)	230
Tru1I	TTAA	2 cut(s)	842, 863
Tru9I	TTAA	2 cut(s)	842, 863
TscAI	CASTG	2 cut(s)	99, 597
TseFI	GTSAC	4 cut(s)	301, 586, 691, 884
TseI	GCWGC	5 cut(s)	158, 253, 353, 464, 489
Tsp45I	GTSAC	4 cut(s)	301, 586, 691, 884
TspDTI	ATGAA	5 cut(s)	42, 51, 144, 265, 337
TspRI	CASTG	2 cut(s)	99, 597
VpaK11BI	GGWCC	2 cut(s)	510, 803
XapI	RAATTY	2 cut(s)	104, 551
XcmI	CCANNNNNNNNNTGG	2 cut(s)	397, 520
XspI	CTAG	2 cut(s)	299, 381
Zsp2I	ATGCAT	1 cut(s)	413

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.