Rop guanine nucleotide exchange factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G38430 |
| fragaria_vesca | FvH4_2g15940 FvH4_2g37830 FvH4_2g37830 |
| malus_domestica | MD05G1128400.v1.1 MD08G1005700.v1.1 MD10G1131700.v1.1 |
| prunus_persica | Prupe.1G357600_v2.0.a1 Prupe.8G172500_v2.0.a1 |
| pyrus_communis | pycom05g12430 pycom08g00440 pycom10g11270 |
| rosa_chinensis | RchiOBHm_Chr6g0279461 RchiOBHm_Chr6g0303881 |
| rosa_laevigata | RLG00000011038 RLG00000013145 |
| rosa_multiflora | Rmu_sc0000274.1_g000004 Rmu_sc0004644.1_g000003 Rmu_sc0007179.1_g000004 |
| rosa_roxburghii | Rroxscaffold_7G00164340 Rroxscaffold_7G00188890 |
| rosa_rugosa | Rorug06G0124300 Rorug06G0325500 Rorug06G0325500 |
| rosa_samantha | Rh6AG439800 Rh6BG238000 Rh6BG463200 Rh6CG452100 Rh6DG439000 |
| rosa_wichuraiana | Rw6G020390 Rw6G038080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 2 cut(s) | 27, 155 |
| Acc36I | ACCTGC | 1 cut(s) | 601 |
| AccB1I | GGYRCC | 4 cut(s) | 169, 193, 433, 456 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1544 |
| AccBSI | CCGCTC | 2 cut(s) | 49, 1702 |
| AccII | CGCG | 2 cut(s) | 163, 1312 |
| AciI | CCGC | 7 cut(s) | 49, 128, 161, 776, 969, 1312, 1702 |
| AcsI | RAATTY | 1 cut(s) | 178 |
| AcyI | GRCGYC | 4 cut(s) | 24, 152, 194, 457 |
| AfaI | GTAC | 1 cut(s) | 541 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 215, 466, 535, 536, 723, 782, 926, 927, 1544 |
| AgsI | TTSAA | 6 cut(s) | 284, 495, 503, 732, 847, 1484 |
| AjnI | CCWGG | 5 cut(s) | 172, 529, 1005, 1228, 1552 |
| AleI | CACNNNNGTG | 1 cut(s) | 1567 |
| Alw21I | GWGCWC | 1 cut(s) | 146 |
| Alw26I | GTCTC | 4 cut(s) | 31, 255, 641, 1190 |
| Ama87I | CYCGRG | 3 cut(s) | 895, 986, 1697 |
| AoxI | GGCC | 5 cut(s) | 725, 1182, 1231, 1329, 1438 |
| ApoI | RAATTY | 1 cut(s) | 178 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 773, 805 |
| AseI | ATTAAT | 1 cut(s) | 864 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 727 |
| AspLEI | GCGC | 4 cut(s) | 74, 196, 459, 1581 |
| AspS9I | GGNCC | 2 cut(s) | 31, 1183 |
| AsuC2I | CCSGG | 3 cut(s) | 671, 717, 1687 |
| AsuHPI | GGTGA | 5 cut(s) | 223, 373, 419, 956, 975 |
| AsuII | TTCGAA | 1 cut(s) | 1588 |
| AvaI | CYCGRG | 3 cut(s) | 895, 986, 1697 |
| AvaII | GGWCC | 1 cut(s) | 31 |
| AxyI | CCTNAGG | 1 cut(s) | 1214 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 509, 542 |
| BanI | GGYRCC | 4 cut(s) | 169, 193, 433, 456 |
| BanII | GRGCYC | 1 cut(s) | 146 |
| BauI | CACGAG | 1 cut(s) | 109 |
| BbsI | GAAGAC | 1 cut(s) | 1616 |
| Bbv12I | GWGCWC | 1 cut(s) | 146 |
| BccI | CCATC | 5 cut(s) | 386, 460, 629, 692, 880 |
| BciT130I | CCWGG | 5 cut(s) | 174, 531, 1007, 1230, 1554 |
| BcnI | CCSGG | 3 cut(s) | 671, 717, 1687 |
| BcoDI | GTCTC | 4 cut(s) | 31, 255, 641, 1190 |
| BfaI | CTAG | 4 cut(s) | 1034, 1250, 1601, 1674 |
| BfmI | CTRYAG | 1 cut(s) | 1395 |
| BfoI | RGCGCY | 3 cut(s) | 75, 197, 460 |
| BfuAI | ACCTGC | 1 cut(s) | 601 |
| BlpI | GCTNAGC | 1 cut(s) | 306 |
| Bme1390I | CCNGG | 8 cut(s) | 174, 531, 671, 717, 1007, 1230, 1554, 1687 |
| Bme18I | GGWCC | 1 cut(s) | 31 |
| BmeT110I | CYCGRG | 3 cut(s) | 895, 986, 1697 |
| BmgT120I | GGNCC | 2 cut(s) | 31, 1183 |
| BmiI | GGNNCC | 4 cut(s) | 171, 195, 435, 458 |
| BmrFI | CCNGG | 8 cut(s) | 174, 531, 671, 717, 1007, 1230, 1554, 1687 |
| BmsI | GCATC | 5 cut(s) | 115, 1000, 1133, 1228, 1366 |
| BpiI | GAAGAC | 1 cut(s) | 1616 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 11, 43 |
| BpmI | CTGGAG | 2 cut(s) | 354, 1521 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1667 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 306 |
| Bpu14I | TTCGAA | 1 cut(s) | 1588 |
| BpuMI | CCSGG | 3 cut(s) | 671, 717, 1687 |
| BsaBI | GATNNNNATC | 1 cut(s) | 890 |
| BsaHI | GRCGYC | 4 cut(s) | 24, 152, 194, 457 |
| BsaI | GGTCTC | 1 cut(s) | 1190 |
| BsaJI | CCNNGG | 5 cut(s) | 529, 670, 855, 1228, 1686 |
| BsaWI | WCCGGW | 1 cut(s) | 208 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 49, 79, 142, 172 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 215, 466, 535, 536, 723, 782, 926, 927, 1544 |
| Bse118I | RCCGGY | 1 cut(s) | 196 |
| Bse1I | ACTGG | 6 cut(s) | 435, 792, 976, 1512, 1538, 1629 |
| Bse21I | CCTNAGG | 1 cut(s) | 1214 |
| Bse3DI | GCAATG | 3 cut(s) | 456, 621, 914 |
| Bse8I | GATNNNNATC | 1 cut(s) | 890 |
| BseBI | CCWGG | 5 cut(s) | 174, 531, 1007, 1230, 1554 |
| BseDI | CCNNGG | 5 cut(s) | 529, 670, 855, 1228, 1686 |
| BseGI | GGATG | 4 cut(s) | 232, 247, 691, 1464 |
| BseJI | GATNNNNATC | 1 cut(s) | 890 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 215, 466, 535, 536, 723, 782, 926, 927, 1544 |
| BseMI | GCAATG | 3 cut(s) | 456, 621, 914 |
| BseMII | CTCAG | 3 cut(s) | 59, 267, 873 |
| BseNI | ACTGG | 6 cut(s) | 435, 792, 976, 1512, 1538, 1629 |
| BseRI | GAGGAG | 2 cut(s) | 59, 351 |
| BseYI | CCCAGC | 1 cut(s) | 1466 |
| BsgI | GTGCAG | 2 cut(s) | 337, 1230 |
| Bsh1236I | CGCG | 2 cut(s) | 163, 1312 |
| BshFI | GGCC | 5 cut(s) | 727, 1184, 1233, 1331, 1440 |
| BshNI | GGYRCC | 4 cut(s) | 169, 193, 433, 456 |
| BsiHKAI | GWGCWC | 1 cut(s) | 146 |
| BsiHKCI | CYCGRG | 3 cut(s) | 895, 986, 1697 |
| BsiSI | CCGG | 7 cut(s) | 115, 197, 209, 251, 670, 717, 1686 |
| BslFI | GGGAC | 3 cut(s) | 839, 1161, 1703 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 215, 466, 535, 536, 723, 782, 926, 927, 1544 |
| BsmAI | GTCTC | 4 cut(s) | 31, 255, 641, 1190 |
| BsmBI | CGTCTC | 3 cut(s) | 31, 255, 641 |
| BsmFI | GGGAC | 3 cut(s) | 839, 1161, 1703 |
| BsmI | GAATGC | 1 cut(s) | 1584 |
| BsnI | GGCC | 5 cut(s) | 727, 1184, 1233, 1331, 1440 |
| Bso31I | GGTCTC | 1 cut(s) | 1190 |
| BsoBI | CYCGRG | 3 cut(s) | 895, 986, 1697 |
| Bsp119I | TTCGAA | 1 cut(s) | 1588 |
| Bsp1286I | GDGCHC | 1 cut(s) | 146 |
| Bsp143I | GATC | 1 cut(s) | 213 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 306 |
| Bsp19I | CCATGG | 1 cut(s) | 855 |
| BspACI | CCGC | 7 cut(s) | 49, 128, 161, 776, 969, 1312, 1702 |
| BspANI | GGCC | 5 cut(s) | 727, 1184, 1233, 1331, 1440 |
| BspCNI | CTCAG | 3 cut(s) | 60, 268, 874 |
| BspFNI | CGCG | 2 cut(s) | 163, 1312 |
| BspLI | GGNNCC | 4 cut(s) | 171, 195, 435, 458 |
| BspMAI | CTGCAG | 1 cut(s) | 1399 |
| BspMI | ACCTGC | 1 cut(s) | 601 |
| BspT104I | TTCGAA | 1 cut(s) | 1588 |
| BspT107I | GGYRCC | 4 cut(s) | 169, 193, 433, 456 |
| BspTNI | GGTCTC | 1 cut(s) | 1190 |
| BsrBI | CCGCTC | 2 cut(s) | 49, 1702 |
| BsrDI | GCAATG | 3 cut(s) | 456, 621, 914 |
| BsrFI | RCCGGY | 1 cut(s) | 196 |
| BsrI | ACTGG | 6 cut(s) | 435, 792, 976, 1512, 1538, 1629 |
| BssAI | RCCGGY | 1 cut(s) | 196 |
| BssECI | CCNNGG | 5 cut(s) | 529, 670, 855, 1228, 1686 |
| BssMI | GATC | 1 cut(s) | 213 |
| BssNI | GRCGYC | 4 cut(s) | 24, 152, 194, 457 |
| BssSI | CACGAG | 1 cut(s) | 109 |
| BssT1I | CCWWGG | 1 cut(s) | 855 |
| Bst2BI | CACGAG | 1 cut(s) | 109 |
| Bst2UI | CCWGG | 5 cut(s) | 174, 531, 1007, 1230, 1554 |
| Bst4CI | ACNGT | 2 cut(s) | 400, 525 |
| Bst6I | CTCTTC | 2 cut(s) | 738, 1448 |
| BstACI | GRCGYC | 4 cut(s) | 24, 152, 194, 457 |
| BstBI | TTCGAA | 1 cut(s) | 1588 |
| BstC8I | GCNNGC | 1 cut(s) | 879 |
| BstDEI | CTNAG | 8 cut(s) | 68, 276, 306, 623, 882, 1214, 1383, 1667 |
| BstDSI | CCRYGG | 1 cut(s) | 855 |
| BstF5I | GGATG | 4 cut(s) | 232, 247, 691, 1464 |
| BstFNI | CGCG | 2 cut(s) | 163, 1312 |
| BstH2I | RGCGCY | 3 cut(s) | 75, 197, 460 |
| BstHHI | GCGC | 4 cut(s) | 74, 196, 459, 1581 |
| BstKTI | GATC | 1 cut(s) | 216 |
| BstMAI | GTCTC | 4 cut(s) | 31, 255, 641, 1190 |
| BstMBI | GATC | 1 cut(s) | 213 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 111, 134, 169, 202, 628, 857, 1121, 1190, 1578 |
| BstNI | CCWGG | 5 cut(s) | 174, 531, 1007, 1230, 1554 |
| BstNSI | RCATGY | 1 cut(s) | 1070 |
| BstSCI | CCNGG | 8 cut(s) | 172, 529, 669, 715, 1005, 1228, 1552, 1685 |
| BstSFI | CTRYAG | 1 cut(s) | 1395 |
| BstUI | CGCG | 2 cut(s) | 163, 1312 |
| BstV2I | GAAGAC | 1 cut(s) | 1616 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1214 |
| BsuRI | GGCC | 5 cut(s) | 727, 1184, 1233, 1331, 1440 |
| BtgI | CCRYGG | 1 cut(s) | 855 |
| BtgZI | GCGATG | 1 cut(s) | 1402 |
| BtsCI | GGATG | 4 cut(s) | 232, 247, 691, 1464 |
| BtsI | GCAGTG | 2 cut(s) | 354, 824 |
| BtsIMutI | CAGTG | 5 cut(s) | 354, 428, 799, 824, 1505 |
| BveI | ACCTGC | 1 cut(s) | 601 |
| Cac8I | GCNNGC | 1 cut(s) | 879 |
| CfoI | GCGC | 4 cut(s) | 74, 196, 459, 1581 |
| Cfr10I | RCCGGY | 1 cut(s) | 196 |
| Cfr13I | GGNCC | 2 cut(s) | 31, 1183 |
| CseI | GACGC | 4 cut(s) | 152, 272, 620, 1700 |
| Csp6I | GTAC | 1 cut(s) | 540 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1522, 1557 |
| CviAII | CATG | 4 cut(s) | 553, 856, 907, 1067 |
| CviQI | GTAC | 1 cut(s) | 540 |
| DdeI | CTNAG | 8 cut(s) | 68, 276, 306, 623, 882, 1214, 1383, 1667 |
| DinI | GGCGCC | 2 cut(s) | 195, 458 |
| DpnI | GATC | 1 cut(s) | 215 |
| DpnII | GATC | 1 cut(s) | 213 |
| Eam1104I | CTCTTC | 2 cut(s) | 738, 1448 |
| EarI | CTCTTC | 2 cut(s) | 738, 1448 |
| EciI | GGCGGA | 1 cut(s) | 765 |
| Ecl136II | GAGCTC | 1 cut(s) | 144 |
| Eco130I | CCWWGG | 1 cut(s) | 855 |
| Eco147I | AGGCCT | 1 cut(s) | 727 |
| Eco24I | GRGCYC | 1 cut(s) | 146 |
| Eco31I | GGTCTC | 1 cut(s) | 1190 |
| Eco32I | GATATC | 1 cut(s) | 949 |
| Eco47I | GGWCC | 1 cut(s) | 31 |
| Eco53kI | GAGCTC | 1 cut(s) | 144 |
| Eco81I | CCTNAGG | 1 cut(s) | 1214 |
| Eco88I | CYCGRG | 3 cut(s) | 895, 986, 1697 |
| EcoICRI | GAGCTC | 1 cut(s) | 144 |
| EcoRII | CCWGG | 5 cut(s) | 172, 529, 1005, 1228, 1552 |
| EcoRV | GATATC | 1 cut(s) | 949 |
| EcoT14I | CCWWGG | 1 cut(s) | 855 |
| EcoT38I | GRGCYC | 1 cut(s) | 146 |
| EgeI | GGCGCC | 2 cut(s) | 195, 458 |
| EheI | GGCGCC | 2 cut(s) | 195, 458 |
| ErhI | CCWWGG | 1 cut(s) | 855 |
| Esp3I | CGTCTC | 3 cut(s) | 31, 255, 641 |
| FaeI | CATG | 4 cut(s) | 556, 859, 910, 1070 |
| FaqI | GGGAC | 3 cut(s) | 839, 1161, 1703 |
| FatI | CATG | 4 cut(s) | 552, 855, 906, 1066 |
| FauI | CCCGC | 2 cut(s) | 1305, 1695 |
| FauNDI | CATATG | 1 cut(s) | 1654 |
| FokI | GGATG | 4 cut(s) | 239, 254, 698, 1471 |
| FriOI | GRGCYC | 1 cut(s) | 146 |
| FspBI | CTAG | 4 cut(s) | 1034, 1250, 1601, 1674 |
| GlaI | GCGC | 4 cut(s) | 73, 195, 458, 1580 |
| GsaI | CCCAGC | 1 cut(s) | 1470 |
| GsuI | CTGGAG | 2 cut(s) | 354, 1521 |
| HaeII | RGCGCY | 3 cut(s) | 75, 197, 460 |
| HaeIII | GGCC | 5 cut(s) | 727, 1184, 1233, 1331, 1440 |
| HapII | CCGG | 7 cut(s) | 115, 197, 209, 251, 670, 717, 1686 |
| HgaI | GACGC | 4 cut(s) | 152, 272, 620, 1700 |
| HhaI | GCGC | 4 cut(s) | 74, 196, 459, 1581 |
| Hin1I | GRCGYC | 4 cut(s) | 24, 152, 194, 457 |
| Hin1II | CATG | 4 cut(s) | 556, 859, 910, 1070 |
| Hin6I | GCGC | 4 cut(s) | 72, 194, 457, 1579 |
| HinP1I | GCGC | 4 cut(s) | 72, 194, 457, 1579 |
| HincII | GTYRAC | 1 cut(s) | 667 |
| HindII | GTYRAC | 1 cut(s) | 667 |
| HindIII | AAGCTT | 3 cut(s) | 308, 605, 933 |
| HinfI | GANTC | 9 cut(s) | 86, 300, 348, 491, 586, 689, 911, 1324, 1403 |
| HpaII | CCGG | 7 cut(s) | 115, 197, 209, 251, 670, 717, 1686 |
| HphI | GGTGA | 5 cut(s) | 223, 373, 419, 956, 975 |
| Hpy166II | GTNNAC | 1 cut(s) | 667 |
| Hpy188III | TCNNGA | 8 cut(s) | 333, 895, 998, 1034, 1298, 1450, 1674, 1697 |
| Hpy8I | GTNNAC | 1 cut(s) | 667 |
| Hpy99I | CGWCG | 1 cut(s) | 19 |
| HpyAV | CCTTC | 9 cut(s) | 125, 286, 522, 717, 738, 841, 1451, 1483, 1551 |
| HpyCH4III | ACNGT | 2 cut(s) | 400, 525 |
| HpyCH4IV | ACGT | 4 cut(s) | 24, 152, 1120, 1281 |
| HpyCH4V | TGCA | 9 cut(s) | 99, 354, 395, 814, 834, 1066, 1124, 1247, 1397 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 111, 134, 169, 202, 628, 857, 1121, 1190, 1578 |
| HpyF3I | CTNAG | 8 cut(s) | 68, 276, 306, 623, 882, 1214, 1383, 1667 |
| HpySE526I | ACGT | 4 cut(s) | 24, 152, 1120, 1281 |
| Hsp92I | GRCGYC | 4 cut(s) | 24, 152, 194, 457 |
| Hsp92II | CATG | 4 cut(s) | 556, 859, 910, 1070 |
| HspAI | GCGC | 4 cut(s) | 72, 194, 457, 1579 |
| KasI | GGCGCC | 2 cut(s) | 193, 456 |
| Kzo9I | GATC | 1 cut(s) | 213 |
| LmnI | GCTCC | 2 cut(s) | 46, 1699 |
| LweI | GCATC | 5 cut(s) | 115, 1000, 1133, 1228, 1366 |
| MaeI | CTAG | 4 cut(s) | 1034, 1250, 1601, 1674 |
| MaeII | ACGT | 4 cut(s) | 24, 152, 1120, 1281 |
| MaeIII | GTNAC | 1 cut(s) | 959 |
| MalI | GATC | 1 cut(s) | 215 |
| MbiI | CCGCTC | 2 cut(s) | 49, 1702 |
| MboI | GATC | 1 cut(s) | 213 |
| MboII | GAAGA | 6 cut(s) | 335, 755, 986, 1465, 1621, 1689 |
| MfeI | CAATTG | 1 cut(s) | 495 |
| MhlI | GDGCHC | 1 cut(s) | 146 |
| MluCI | AATT | 7 cut(s) | 178, 495, 678, 732, 861, 1293, 1619 |
| Mly113I | GGCGCC | 2 cut(s) | 194, 457 |
| MlyI | GAGTC | 4 cut(s) | 95, 357, 920, 1333 |
| MmeI | TCCRAC | 1 cut(s) | 1541 |
| MroXI | GAANNNNTTC | 1 cut(s) | 727 |
| MseI | TTAA | 2 cut(s) | 864, 1335 |
| MslI | CAYNNNNRTG | 2 cut(s) | 557, 1567 |
| MspA1I | CMGCKG | 2 cut(s) | 1061, 1631 |
| MspI | CCGG | 7 cut(s) | 115, 197, 209, 251, 670, 717, 1686 |
| MspR9I | CCNGG | 8 cut(s) | 174, 531, 671, 717, 1007, 1230, 1554, 1687 |
| MunI | CAATTG | 1 cut(s) | 495 |
| Mva1269I | GAATGC | 1 cut(s) | 1584 |
| MvaI | CCWGG | 5 cut(s) | 174, 531, 1007, 1230, 1554 |
| MvnI | CGCG | 2 cut(s) | 163, 1312 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 111, 134, 169, 202, 628, 857, 1121, 1190, 1578 |
| NarI | GGCGCC | 2 cut(s) | 194, 457 |
| NciI | CCSGG | 3 cut(s) | 671, 717, 1687 |
| NcoI | CCATGG | 1 cut(s) | 855 |
| NdeI | CATATG | 1 cut(s) | 1654 |
| NdeII | GATC | 1 cut(s) | 213 |
| NlaIII | CATG | 4 cut(s) | 556, 859, 910, 1070 |
| NlaIV | GGNNCC | 4 cut(s) | 171, 195, 435, 458 |
| NmeAIII | GCCGAG | 1 cut(s) | 485 |
| NspI | RCATGY | 1 cut(s) | 1070 |
| NspV | TTCGAA | 1 cut(s) | 1588 |
| OliI | CACNNNNGTG | 1 cut(s) | 1567 |
| PceI | AGGCCT | 1 cut(s) | 727 |
| PctI | GAATGC | 1 cut(s) | 1584 |
| PdmI | GAANNNNTTC | 1 cut(s) | 727 |
| PfeI | GAWTC | 5 cut(s) | 300, 491, 586, 689, 1403 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1544 |
| PfoI | TCCNGGA | 1 cut(s) | 1552 |
| PleI | GAGTC | 4 cut(s) | 94, 356, 919, 1332 |
| PluTI | GGCGCC | 2 cut(s) | 197, 460 |
| PpsI | GAGTC | 4 cut(s) | 94, 356, 919, 1332 |
| PshBI | ATTAAT | 1 cut(s) | 864 |
| Psp124BI | GAGCTC | 1 cut(s) | 146 |
| Psp6I | CCWGG | 5 cut(s) | 172, 529, 1005, 1228, 1552 |
| PspFI | CCCAGC | 1 cut(s) | 1466 |
| PspGI | CCWGG | 5 cut(s) | 172, 529, 1005, 1228, 1552 |
| PspN4I | GGNNCC | 4 cut(s) | 171, 195, 435, 458 |
| PspPI | GGNCC | 2 cut(s) | 31, 1183 |
| PstI | CTGCAG | 1 cut(s) | 1399 |
| PvuII | CAGCTG | 2 cut(s) | 1061, 1631 |
| RsaI | GTAC | 1 cut(s) | 541 |
| RsaNI | GTAC | 1 cut(s) | 540 |
| RseI | CAYNNNNRTG | 2 cut(s) | 557, 1567 |
| SacI | GAGCTC | 1 cut(s) | 146 |
| SaqAI | TTAA | 2 cut(s) | 864, 1335 |
| Sau3AI | GATC | 1 cut(s) | 213 |
| Sau96I | GGNCC | 2 cut(s) | 31, 1183 |
| SchI | GAGTC | 4 cut(s) | 95, 357, 920, 1333 |
| ScrFI | CCNGG | 8 cut(s) | 174, 531, 671, 717, 1007, 1230, 1554, 1687 |
| SduI | GDGCHC | 1 cut(s) | 146 |
| SfaNI | GCATC | 5 cut(s) | 115, 1000, 1133, 1228, 1366 |
| SfcI | CTRYAG | 1 cut(s) | 1395 |
| SfoI | GGCGCC | 2 cut(s) | 195, 458 |
| SfuI | TTCGAA | 1 cut(s) | 1588 |
| SinI | GGWCC | 1 cut(s) | 31 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 557, 1567 |
| Sse9I | AATT | 7 cut(s) | 178, 495, 678, 732, 861, 1293, 1619 |
| SseBI | AGGCCT | 1 cut(s) | 727 |
| SsiI | CCGC | 7 cut(s) | 49, 128, 161, 776, 969, 1312, 1702 |
| SspDI | GGCGCC | 2 cut(s) | 193, 456 |
| SspMI | CTAG | 4 cut(s) | 1034, 1250, 1601, 1674 |
| SstI | GAGCTC | 1 cut(s) | 146 |
| StuI | AGGCCT | 1 cut(s) | 727 |
| StyD4I | CCNGG | 8 cut(s) | 172, 529, 669, 715, 1005, 1228, 1552, 1685 |
| StyI | CCWWGG | 1 cut(s) | 855 |
| TaaI | ACNGT | 2 cut(s) | 400, 525 |
| TaiI | ACGT | 4 cut(s) | 27, 155, 1123, 1284 |
| TaqI | TCGA | 5 cut(s) | 123, 140, 146, 515, 1588 |
| TasI | AATT | 7 cut(s) | 178, 495, 678, 732, 861, 1293, 1619 |
| TfiI | GAWTC | 5 cut(s) | 300, 491, 586, 689, 1403 |
| Tru1I | TTAA | 2 cut(s) | 864, 1335 |
| Tru9I | TTAA | 2 cut(s) | 864, 1335 |
| TscAI | CASTG | 5 cut(s) | 361, 435, 799, 824, 1512 |
| TspDTI | ATGAA | 2 cut(s) | 305, 1271 |
| TspGWI | ACGGA | 1 cut(s) | 665 |
| TspRI | CASTG | 5 cut(s) | 361, 435, 799, 824, 1512 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1544 |
| VpaK11BI | GGWCC | 1 cut(s) | 31 |
| VspI | ATTAAT | 1 cut(s) | 864 |
| XapI | RAATTY | 1 cut(s) | 178 |
| XbaI | TCTAGA | 2 cut(s) | 1033, 1673 |
| XceI | RCATGY | 1 cut(s) | 1070 |
| XmnI | GAANNNNTTC | 1 cut(s) | 727 |
| XspI | CTAG | 4 cut(s) | 1034, 1250, 1601, 1674 |
| ZraI | GACGTC | 2 cut(s) | 25, 153 |