Rroxscaffold_7G00164340

PRONE (Plant-specific Rop nucleotide exchanger)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0004730
Physical Location & Seq
Forward (+)
6328949 .. 6332036
3088 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00164340.1

Sequence Viewer

Length: 1680 bp
ATGGAGAGCGTCAACGCCTTGTCATCGTCGGAAGATGAAGACGTGGAGGACTTGAGCGAGCGGTTCGAGAGCTATAGCTTGAGTGCTGACGTTAGTGAGTCGGAAAGCTCAACTAGTACTAGCTTTTCCAGTCGGAAAAACGAAGCTCATGCTTCTACTTCCATGACTTCCTCGCCGCCCTCCGGACCGGACTTCGCTGACATTTTTTACCGCAAGGCGGCGCTGCCGGTCATTTTCCAGGCCTTCGGTGGTGGACGTAATGTTGTAGTTCCGGCGATGACGGAGAAGACTGAGGCTGACTTGTCTGAGGTTGAATTGATGAAGGAGAGATTTGCAAAGCTTCTGCTTGGAGAAGATATGTCAGGTGGAGGCAATGGAGTCTGCACTGCTCTTGCTATTTCCAATGCCATCACAAATCTTTCTGCTACTGTGTTTGGAGAGTTATGGAAGTTGGAGCCATTGGCACCGCAGAAGAAGGAAATGTGGTGCCGAGAAATGGAATGGCTTTTGTGTGTGAGTGATTCCATTGTTGAGCTCAGACCATCAACTCAAGAATTCCCTGGTGGTGGGACTTTTGAGGTTATGGTCACTCGTCCCCGCTCGGATCTATATGTGAGCCTACCTGCCCTCAAGAAACTGGATGCAATGCTGCTCAGCCTTCTGGAAGGATTTAGTGATTCCGAGTTTTATTATGTTGACCGAGGGATAATTGTTGCTGATACTGATGATACCGAAACATTTTCCCGATCTTCCTCTTCAGGTAGACCTTCAATTAGGCAAGAAGAGAAGTGGTGGCTCCCATTCCCTAAAGTACCCCAAAATGGTCTGTCTGAAAATGTGAGGAAGGCATTGCAGCACTGTAGGGAATGCGCACATCAGATCCTTAAGGCCTCCATGGCCATCAATAGTAATGCGCTGGCTGAAATGGAAATCCCAGATGCTTATTTAGAGAGCTTGCCCAAGAGTGGGAAAGCTTGTCTAGGCGAAATCATTTACCGTTTTATAACTGCTGATCGGTTCTCCCCAGAGTGTCTTCTTGACTACCTGGACCTCTCATCAGAGTACACCACTCTTGAAATAGCTAACAGGATTGAGGCTGCTGCACACATTTGGAGACAGAAACACCTCAAACGCCATCTGAAGCCTGCGAAATCCGGTAAGTCATCCTGGGGTGGAAAGGTCAAGGGATTGGTTGGTGACATGGATAAATGTAAGCTTCTAGCCTCCCGAGTCGATACCATCTTACAGAATCTAAGGATACGGTTCCCTGGCCTCCCACAGACGGCTCTGGACATGAGCAAGATTCAGTATAACAAGGATGTGGGGCACTCACTCCTTGAGAGCTATTCCAGGGTCATGGAAAGCTTAGCCTTCAACATAATGGCAAGGATTGATGATCTTCTATACGTAGACGATGCCAGCAGGCAACGCGCAGCTGCAATGTCGATGTCTCTATATGAGCAAAGAAGGTTTGGTGCCGCCTTGCCAAAACAGAAGAGGCTGTTGAGGAGTCCTTTATCAATTCAACACAACTCTTGTGGCCCTTCAACTACAATACCGGCAATGGATGATCCTCCCTTTCAGATAGCGAGAAGCCCTGGCGGAAGAAGGCATCAGTCTACAAAGGACAGGAATTTAAATGACTTGCTGCATGAGAAGTTAGAAAATTTTACTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PRONE

Protein Analysis

559

Amino Acids

62.29

Weight (kDa)

5.66

Isoelectric Point (pI)

57.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PRONE PF03759 102 - 475 5.9e-172 PRONE (Plant-specific Rop nucleotide exchanger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1004
Acc16I TGCGCA 1 cut(s) 871
Acc36I ACCTGC 1 cut(s) 631
AccB1I GGYRCC 3 cut(s) 463, 486, 1475
AccBSI CCGCTC 2 cut(s) 61, 600
AccI GTMKAC 3 cut(s) 763, 1410, 1619
AccII CGCG 1 cut(s) 1431
AccIII TCCGGA 1 cut(s) 182
AciI CCGC 8 cut(s) 61, 176, 211, 218, 467, 598, 1479, 1602
AclWI GGATC 3 cut(s) 612, 874, 1565
AcoI YGGCCR 1 cut(s) 897
AcsI RAATTY 3 cut(s) 554, 1633, 1666
AcuI CTGAAG 2 cut(s) 741, 1160
AfaI GTAC 3 cut(s) 118, 813, 1064
AfiI CCNNNNNNNGG 8 cut(s) 182, 217, 496, 566, 821, 965, 966, 1282
AflII CTTAAG 1 cut(s) 884
AgsI TTSAA 6 cut(s) 314, 771, 1076, 1375, 1526, 1548
AhlI ACTAGT 1 cut(s) 113
AjiI CACGTC 1 cut(s) 43
AjnI CCWGG 7 cut(s) 237, 559, 1044, 1166, 1267, 1349, 1597
Alw21I GWGCWC 1 cut(s) 537
Alw26I GTCTC 2 cut(s) 1108, 1455
AlwI GGATC 3 cut(s) 612, 874, 1565
Ama87I CYCGRG 1 cut(s) 1227
Aor13HI TCCGGA 1 cut(s) 182
AoxI GGCC 5 cut(s) 240, 888, 897, 1270, 1540
ApeKI GCWGC 8 cut(s) 223, 649, 853, 1097, 1100, 1433, 1436, 1648
ApoI RAATTY 3 cut(s) 554, 1633, 1666
AspLEI GCGC 4 cut(s) 223, 872, 916, 1433
AspS9I GGNCC 3 cut(s) 185, 1048, 1541
AsuHPI GGTGA 1 cut(s) 1208
AvaI CYCGRG 1 cut(s) 1227
AvaII GGWCC 2 cut(s) 185, 1048
BaeGI GKGCMC 1 cut(s) 1329
BalI TGGCCA 1 cut(s) 899
BanI GGYRCC 3 cut(s) 463, 486, 1475
BanII GRGCYC 1 cut(s) 537
BbsI GAAGAC 3 cut(s) 45, 293, 1025
Bbv12I GWGCWC 1 cut(s) 537
BbvI GCAGC 8 cut(s) 210, 636, 865, 1084, 1087, 1423, 1445, 1635
BccI CCATC 5 cut(s) 416, 550, 908, 1143, 1247
BceAI ACGGC 1 cut(s) 1299
BcgI CGANNNNNNTGC 2 cut(s) 131, 165
BciT130I CCWGG 7 cut(s) 239, 561, 1046, 1168, 1269, 1351, 1599
BciVI GTATCC 1 cut(s) 1251
BcoDI GTCTC 2 cut(s) 1108, 1455
BcuI ACTAGT 1 cut(s) 113
BfaI CTAG 4 cut(s) 114, 120, 980, 1220
BfmI CTRYAG 2 cut(s) 73, 859
BfoI RGCGCY 1 cut(s) 224
BfrI CTTAAG 1 cut(s) 884
BfuAI ACCTGC 1 cut(s) 631
BfuI GTATCC 1 cut(s) 1251
BglI GCCNNNNNGGC 1 cut(s) 896
BlpI GCTNAGC 2 cut(s) 653, 1366
BmcAI AGTACT 1 cut(s) 118
Bme1390I CCNGG 7 cut(s) 239, 561, 1046, 1168, 1269, 1351, 1599
Bme18I GGWCC 2 cut(s) 185, 1048
BmeT110I CYCGRG 1 cut(s) 1227
BmgBI CACGTC 1 cut(s) 43
BmgT120I GGNCC 3 cut(s) 185, 1048, 1541
BmiI GGNNCC 6 cut(s) 456, 465, 488, 797, 1265, 1477
BmrFI CCNGG 7 cut(s) 239, 561, 1046, 1168, 1269, 1351, 1599
BmsI GCATC 4 cut(s) 631, 928, 1405, 1621
BpiI GAAGAC 3 cut(s) 45, 293, 1025
Bpu1102I GCTNAGC 2 cut(s) 653, 1366
BpuEI CTTGAG 5 cut(s) 73, 100, 534, 614, 1358
BsaAI YACGTR 1 cut(s) 1408
BsaJI CCNNGG 7 cut(s) 559, 700, 894, 1167, 1267, 1350, 1597
BsaWI WCCGGW 3 cut(s) 182, 187, 1154
Bsc4I CCNNNNNNNGG 8 cut(s) 182, 217, 496, 566, 821, 965, 966, 1282
Bse118I RCCGGY 2 cut(s) 226, 1558
Bse1I ACTGG 2 cut(s) 129, 642
Bse3DI GCAATG 5 cut(s) 379, 651, 848, 1446, 1569
BseAI TCCGGA 1 cut(s) 182
BseBI CCWGG 7 cut(s) 239, 561, 1046, 1168, 1269, 1351, 1599
BseDI CCNNGG 7 cut(s) 559, 700, 894, 1167, 1267, 1350, 1597
BseGI GGATG 4 cut(s) 646, 1163, 1324, 1573
BseLI CCNNNNNNNGG 8 cut(s) 182, 217, 496, 566, 821, 965, 966, 1282
BseMI GCAATG 5 cut(s) 379, 651, 848, 1446, 1569
BseMII CTCAG 4 cut(s) 282, 297, 550, 667
BseNI ACTGG 2 cut(s) 129, 642
BseRI GAGGAG 1 cut(s) 1522
BseSI GKGCMC 1 cut(s) 1329
BseXI GCAGC 8 cut(s) 210, 636, 865, 1084, 1087, 1423, 1445, 1635
BsgI GTGCAG 2 cut(s) 367, 1086
Bsh1236I CGCG 1 cut(s) 1431
BshFI GGCC 5 cut(s) 242, 890, 899, 1272, 1542
BshNI GGYRCC 3 cut(s) 463, 486, 1475
BsiHKAI GWGCWC 1 cut(s) 537
BsiHKCI CYCGRG 1 cut(s) 1227
BsiSI CCGG 6 cut(s) 183, 188, 227, 272, 1155, 1559
BslFI GGGAC 2 cut(s) 579, 583
BslI CCNNNNNNNGG 8 cut(s) 182, 217, 496, 566, 821, 965, 966, 1282
BsmAI GTCTC 2 cut(s) 1108, 1455
BsmFI GGGAC 2 cut(s) 579, 583
BsmI GAATGC 1 cut(s) 872
BsnI GGCC 5 cut(s) 242, 890, 899, 1272, 1542
BsoBI CYCGRG 1 cut(s) 1227
Bsp1286I GDGCHC 2 cut(s) 537, 1329
Bsp13I TCCGGA 1 cut(s) 182
Bsp143I GATC 6 cut(s) 604, 746, 879, 1012, 1396, 1570
Bsp1720I GCTNAGC 2 cut(s) 653, 1366
Bsp19I CCATGG 1 cut(s) 894
BspACI CCGC 8 cut(s) 61, 176, 211, 218, 467, 598, 1479, 1602
BspANI GGCC 5 cut(s) 242, 890, 899, 1272, 1542
BspCNI CTCAG 4 cut(s) 283, 298, 549, 666
BspEI TCCGGA 1 cut(s) 182
BspFNI CGCG 1 cut(s) 1431
BspLI GGNNCC 6 cut(s) 456, 465, 488, 797, 1265, 1477
BspMI ACCTGC 1 cut(s) 631
BspPI GGATC 3 cut(s) 612, 874, 1565
BspT107I GGYRCC 3 cut(s) 463, 486, 1475
BspTI CTTAAG 1 cut(s) 884
BsrBI CCGCTC 2 cut(s) 61, 600
BsrDI GCAATG 5 cut(s) 379, 651, 848, 1446, 1569
BsrFI RCCGGY 2 cut(s) 226, 1558
BsrI ACTGG 2 cut(s) 129, 642
BssAI RCCGGY 2 cut(s) 226, 1558
BssECI CCNNGG 7 cut(s) 559, 700, 894, 1167, 1267, 1350, 1597
BssMI GATC 6 cut(s) 604, 746, 879, 1012, 1396, 1570
BssT1I CCWWGG 1 cut(s) 894
Bst2UI CCWGG 7 cut(s) 239, 561, 1046, 1168, 1269, 1351, 1599
Bst4CI ACNGT 4 cut(s) 430, 860, 998, 1263
Bst6I CTCTTC 3 cut(s) 760, 777, 1490
BstAFI CTTAAG 1 cut(s) 884
BstBAI YACGTR 1 cut(s) 1408
BstC8I GCNNGC 6 cut(s) 59, 918, 956, 1146, 1420, 1424
BstDEI CTNAG 6 cut(s) 291, 306, 536, 653, 1253, 1366
BstDSI CCRYGG 1 cut(s) 894
BstF5I GGATG 4 cut(s) 646, 1163, 1324, 1573
BstFNI CGCG 1 cut(s) 1431
BstH2I RGCGCY 1 cut(s) 224
BstHHI GCGC 4 cut(s) 223, 872, 916, 1433
BstKTI GATC 6 cut(s) 607, 749, 882, 1015, 1399, 1573
BstMAI GTCTC 2 cut(s) 1108, 1455
BstMBI GATC 6 cut(s) 604, 746, 879, 1012, 1396, 1570
BstMWI GCNNNNNNNGC 2 cut(s) 896, 1428
BstNI CCWGG 7 cut(s) 239, 561, 1046, 1168, 1269, 1351, 1599
BstSCI CCNGG 7 cut(s) 237, 559, 1044, 1166, 1267, 1349, 1597
BstSFI CTRYAG 2 cut(s) 73, 859
BstSLI GKGCMC 1 cut(s) 1329
BstSNI TACGTA 1 cut(s) 1408
BstUI CGCG 1 cut(s) 1431
BstV1I GCAGC 8 cut(s) 210, 636, 865, 1084, 1087, 1423, 1445, 1635
BstV2I GAAGAC 3 cut(s) 45, 293, 1025
BstX2I RGATCY 2 cut(s) 604, 879
BstXI CCANNNNNNTGG 1 cut(s) 1357
BstYI RGATCY 2 cut(s) 604, 879
BsuI GTATCC 1 cut(s) 1251
BsuRI GGCC 5 cut(s) 242, 890, 899, 1272, 1542
BtgI CCRYGG 1 cut(s) 894
BtgZI GCGATG 1 cut(s) 290
BtrI CACGTC 1 cut(s) 43
BtsCI GGATG 4 cut(s) 646, 1163, 1324, 1573
BtsI GCAGTG 1 cut(s) 384
BtsIMutI CAGTG 2 cut(s) 384, 856
BveI ACCTGC 1 cut(s) 631
Cac8I GCNNGC 6 cut(s) 59, 918, 956, 1146, 1420, 1424
CfoI GCGC 4 cut(s) 223, 872, 916, 1433
Cfr10I RCCGGY 2 cut(s) 226, 1558
Cfr13I GGNCC 3 cut(s) 185, 1048, 1541
CpoI CGGWCCG 1 cut(s) 185
Csp6I GTAC 3 cut(s) 117, 812, 1063
CspCI CAANNNNNGTGG 2 cut(s) 1519, 1554
CspI CGGWCCG 1 cut(s) 185
CviAII CATG 7 cut(s) 149, 163, 895, 1201, 1294, 1357, 1652
CviQI GTAC 3 cut(s) 117, 812, 1063
DdeI CTNAG 6 cut(s) 291, 306, 536, 653, 1253, 1366
DpnI GATC 6 cut(s) 606, 748, 881, 1014, 1398, 1572
DpnII GATC 6 cut(s) 604, 746, 879, 1012, 1396, 1570
DraI TTTAAA 1 cut(s) 1638
EaeI YGGCCR 1 cut(s) 897
Eam1104I CTCTTC 3 cut(s) 760, 777, 1490
EarI CTCTTC 3 cut(s) 760, 777, 1490
EciI GGCGGA 1 cut(s) 1617
Ecl136II GAGCTC 1 cut(s) 535
Eco105I TACGTA 1 cut(s) 1408
Eco130I CCWWGG 1 cut(s) 894
Eco147I AGGCCT 2 cut(s) 242, 890
Eco24I GRGCYC 1 cut(s) 537
Eco47I GGWCC 2 cut(s) 185, 1048
Eco53kI GAGCTC 1 cut(s) 535
Eco57I CTGAAG 2 cut(s) 741, 1160
Eco88I CYCGRG 1 cut(s) 1227
EcoICRI GAGCTC 1 cut(s) 535
EcoRI GAATTC 1 cut(s) 554
EcoRII CCWGG 7 cut(s) 237, 559, 1044, 1166, 1267, 1349, 1597
EcoT14I CCWWGG 1 cut(s) 894
EcoT38I GRGCYC 1 cut(s) 537
ErhI CCWWGG 1 cut(s) 894
FaeI CATG 7 cut(s) 152, 166, 898, 1204, 1297, 1360, 1655
FaqI GGGAC 2 cut(s) 579, 583
FatI CATG 7 cut(s) 148, 162, 894, 1200, 1293, 1356, 1651
FauI CCCGC 1 cut(s) 605
FblI GTMKAC 3 cut(s) 763, 1410, 1619
FokI GGATG 4 cut(s) 653, 1150, 1331, 1580
FriOI GRGCYC 1 cut(s) 537
FspAI RTGCGCAY 1 cut(s) 871
FspBI CTAG 4 cut(s) 114, 120, 980, 1220
FspI TGCGCA 1 cut(s) 871
GlaI GCGC 4 cut(s) 222, 871, 915, 1432
HaeII RGCGCY 1 cut(s) 224
HaeIII GGCC 5 cut(s) 242, 890, 899, 1272, 1542
HapII CCGG 6 cut(s) 183, 188, 227, 272, 1155, 1559
HhaI GCGC 4 cut(s) 223, 872, 916, 1433
Hin1II CATG 7 cut(s) 152, 166, 898, 1204, 1297, 1360, 1655
Hin6I GCGC 4 cut(s) 221, 870, 914, 1431
HinP1I GCGC 4 cut(s) 221, 870, 914, 1431
HincII GTYRAC 2 cut(s) 13, 697
HindII GTYRAC 2 cut(s) 13, 697
HindIII AAGCTT 4 cut(s) 338, 972, 1214, 1363
HinfI GANTC 8 cut(s) 98, 378, 521, 677, 1230, 1249, 1303, 1510
HpaII CCGG 6 cut(s) 183, 188, 227, 272, 1155, 1559
HphI GGTGA 1 cut(s) 1208
Hpy166II GTNNAC 7 cut(s) 13, 254, 697, 764, 1065, 1411, 1620
Hpy8I GTNNAC 7 cut(s) 13, 254, 697, 764, 1065, 1411, 1620
Hpy99I CGWCG 1 cut(s) 31
HpyCH4III ACNGT 4 cut(s) 430, 860, 998, 1263
HpyCH4IV ACGT 4 cut(s) 42, 90, 256, 1407
HpyCH4V TGCA 7 cut(s) 335, 384, 644, 853, 1103, 1439, 1651
HpyF10VI GCNNNNNNNGC 2 cut(s) 896, 1428
HpyF3I CTNAG 6 cut(s) 291, 306, 536, 653, 1253, 1366
HpySE526I ACGT 4 cut(s) 42, 90, 256, 1407
Hsp92II CATG 7 cut(s) 152, 166, 898, 1204, 1297, 1360, 1655
HspAI GCGC 4 cut(s) 221, 870, 914, 1431
Kpn2I TCCGGA 1 cut(s) 182
Kzo9I GATC 6 cut(s) 604, 746, 879, 1012, 1396, 1570
LmnI GCTCC 2 cut(s) 454, 801
Lsp1109I GCAGC 8 cut(s) 210, 636, 865, 1084, 1087, 1423, 1445, 1635
LweI GCATC 4 cut(s) 631, 928, 1405, 1621
MaeI CTAG 4 cut(s) 114, 120, 980, 1220
MaeII ACGT 4 cut(s) 42, 90, 256, 1407
MaeIII GTNAC 2 cut(s) 586, 1196
MalI GATC 6 cut(s) 606, 748, 881, 1014, 1398, 1572
MbiI CCGCTC 2 cut(s) 61, 600
MboI GATC 6 cut(s) 604, 746, 879, 1012, 1396, 1570
MflI RGATCY 2 cut(s) 604, 879
MhlI GDGCHC 2 cut(s) 537, 1329
MlsI TGGCCA 1 cut(s) 899
MluCI AATT 7 cut(s) 314, 554, 708, 771, 1521, 1633, 1666
MluNI TGGCCA 1 cut(s) 899
MlyI GAGTC 4 cut(s) 107, 387, 1239, 1519
MmeI TCCRAC 4 cut(s) 9, 81, 113, 432
Mox20I TGGCCA 1 cut(s) 899
MroI TCCGGA 1 cut(s) 182
MscI TGGCCA 1 cut(s) 899
MseI TTAA 2 cut(s) 885, 1637
Msp20I TGGCCA 1 cut(s) 899
MspA1I CMGCKG 1 cut(s) 1436
MspCI CTTAAG 1 cut(s) 884
MspI CCGG 6 cut(s) 183, 188, 227, 272, 1155, 1559
MspR9I CCNGG 7 cut(s) 239, 561, 1046, 1168, 1269, 1351, 1599
Mva1269I GAATGC 1 cut(s) 872
MvaI CCWGG 7 cut(s) 239, 561, 1046, 1168, 1269, 1351, 1599
MvnI CGCG 1 cut(s) 1431
MwoI GCNNNNNNNGC 2 cut(s) 896, 1428
NcoI CCATGG 1 cut(s) 894
NdeII GATC 6 cut(s) 604, 746, 879, 1012, 1396, 1570
NlaIII CATG 7 cut(s) 152, 166, 898, 1204, 1297, 1360, 1655
NlaIV GGNNCC 6 cut(s) 456, 465, 488, 797, 1265, 1477
NmeAIII GCCGAG 1 cut(s) 515
NmuCI GTSAC 2 cut(s) 586, 1196
NsbI TGCGCA 1 cut(s) 871
PceI AGGCCT 2 cut(s) 242, 890
PctI GAATGC 1 cut(s) 872
PfeI GAWTC 4 cut(s) 521, 677, 1249, 1303
PleI GAGTC 4 cut(s) 106, 386, 1238, 1518
PpsI GAGTC 4 cut(s) 106, 386, 1238, 1518
Ppu21I YACGTR 1 cut(s) 1408
PsiI TTATAA 1 cut(s) 1004
Psp124BI GAGCTC 1 cut(s) 537
Psp6I CCWGG 7 cut(s) 237, 559, 1044, 1166, 1267, 1349, 1597
PspGI CCWGG 7 cut(s) 237, 559, 1044, 1166, 1267, 1349, 1597
PspN4I GGNNCC 6 cut(s) 456, 465, 488, 797, 1265, 1477
PspPI GGNCC 3 cut(s) 185, 1048, 1541
PsuI RGATCY 2 cut(s) 604, 879
PvuII CAGCTG 1 cut(s) 1436
RsaI GTAC 3 cut(s) 118, 813, 1064
RsaNI GTAC 3 cut(s) 117, 812, 1063
Rsr2I CGGWCCG 1 cut(s) 185
RsrII CGGWCCG 1 cut(s) 185
SacI GAGCTC 1 cut(s) 537
SaqAI TTAA 2 cut(s) 885, 1637
Sau3AI GATC 6 cut(s) 604, 746, 879, 1012, 1396, 1570
Sau96I GGNCC 3 cut(s) 185, 1048, 1541
ScaI AGTACT 1 cut(s) 118
SchI GAGTC 4 cut(s) 107, 387, 1239, 1519
ScrFI CCNGG 7 cut(s) 239, 561, 1046, 1168, 1269, 1351, 1599
SduI GDGCHC 2 cut(s) 537, 1329
SfaNI GCATC 4 cut(s) 631, 928, 1405, 1621
SfcI CTRYAG 2 cut(s) 73, 859
SfiI GGCCNNNNNGGCC 1 cut(s) 896
SinI GGWCC 2 cut(s) 185, 1048
SmiI ATTTAAAT 1 cut(s) 1638
SmlI CTYRAG 6 cut(s) 52, 79, 549, 629, 884, 1337
SmoI CTYRAG 6 cut(s) 52, 79, 549, 629, 884, 1337
SnaBI TACGTA 1 cut(s) 1408
SpeI ACTAGT 1 cut(s) 113
Sse9I AATT 7 cut(s) 314, 554, 708, 771, 1521, 1633, 1666
SseBI AGGCCT 2 cut(s) 242, 890
SsiI CCGC 8 cut(s) 61, 176, 211, 218, 467, 598, 1479, 1602
SspMI CTAG 4 cut(s) 114, 120, 980, 1220
SstI GAGCTC 1 cut(s) 537
StuI AGGCCT 2 cut(s) 242, 890
StyD4I CCNGG 7 cut(s) 237, 559, 1044, 1166, 1267, 1349, 1597
StyI CCWWGG 1 cut(s) 894
SwaI ATTTAAAT 1 cut(s) 1638
TaaI ACNGT 4 cut(s) 430, 860, 998, 1263
TaiI ACGT 4 cut(s) 45, 93, 259, 1410
TaqI TCGA 3 cut(s) 66, 1233, 1445
TaqII GACCGA 1 cut(s) 714
TasI AATT 7 cut(s) 314, 554, 708, 771, 1521, 1633, 1666
TatI WGTACW 2 cut(s) 116, 1062
TauI GCSGC 3 cut(s) 178, 221, 1481
TfiI GAWTC 4 cut(s) 521, 677, 1249, 1303
Tru1I TTAA 2 cut(s) 885, 1637
Tru9I TTAA 2 cut(s) 885, 1637
TscAI CASTG 2 cut(s) 391, 863
TseFI GTSAC 2 cut(s) 586, 1196
TseI GCWGC 8 cut(s) 223, 649, 853, 1097, 1100, 1433, 1436, 1648
Tsp45I GTSAC 2 cut(s) 586, 1196
TspDTI ATGAA 2 cut(s) 51, 335
TspGWI ACGGA 1 cut(s) 296
TspRI CASTG 2 cut(s) 391, 863
Vha464I CTTAAG 1 cut(s) 884
VpaK11BI GGWCC 2 cut(s) 185, 1048
XapI RAATTY 3 cut(s) 554, 1633, 1666
XcmI CCANNNNNNNNNTGG 1 cut(s) 245
XmiI GTMKAC 3 cut(s) 763, 1410, 1619
XspI CTAG 4 cut(s) 114, 120, 980, 1220
ZrmI AGTACT 1 cut(s) 118
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.