Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0004730

Physical Location & Seq

Genomic Coordinates Reverse (-)

61566575 .. 61569876

Gene Structure 3302 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG439000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGGAGAGCGTCAACGTCTCGTTCTCGTCGGAAGATGAAGACGTGGAGGACTTGAGCGAGCGGTTCGAGAGCTATAGCTTGTGTGCTGACGTTAGCGAGTCGGAAAGCTCAACTAGTACTAGCTTTTCCTGTCGGAAAAACGAAGCTCATGCTTCTACTTCCATGACTTCCTCGCCGCCCTCCGGACCGGACTTCGCTGACATTTTTTACCGCAAGACGGCGCTGCCGGTCATGTTGCCGGCCTTCGGTGGTGGACGTAATGTTGTAGTTCCGGCGATGACGGAGAAGACTGAGGCTGACTTGTCTGAGGTTGAATTGATGAAGGAGAGATTTGCAAAGCTTCTGCTTGGAGAAGATATGTCAGGTGGAGGCAATGGAGTCTGCACTGCTCTTGCTATTTCCAATGCCATCACAAATCTTTCTGGTTTGCACAAATTCTCGTCTTGCTGTCCTTTCTATTGCTTGTTTTTGTTTCTCTGTAATTTTCCCCAAAACACTTCTTCTAATATGTTTGAATTGACACGAATAATAAGTGCAGCTACTGTGTTTGGAGAGTTATGGAAGTTGGAGCCATTGGCACCCCAGAAGAAGGCAATGTGGTGCCGAGAAATGGAATGGCTTTTGTGTGTGAGTGATTCTATTGTTGAGCTCATACCATCAACTCAAGAATTCCCTGGTGGTGGGACTTTTGAGGTTATGGTCACTCGTCCCCGCTCGGATCTATATGTGAGCCTACCTGCCCTCAAGAAACTGGATGCAATGCTGCTTAGCCTTCTGGATGGATTTAGTGATTCCGAGTTTTATTATGTTGACCGAGGGATAATTGTTGCTGATACTGATGATACCGAAACATTTTCCCGATCTTCCTCTTCGGGTAGACCTTCAATTAGGCAAGAAGAGAAGTGGTGGCTCCCATTCCCTAAAGTACCCCAAAATGGTCTGTCTGAAAATGTGAGGAAGGCATTGCAGCACTGTAGGGAATGCGCACATCAGATCCTTAAGGCCTCCATGGCCATCAATAGTAATGTGCTGGCTGAAATGGAAATCCCAGATGCTTATTTAGAGAGCTTGCCCAAGAGTGGGAAAGCTTGTCTAGGCGAAATCATTTACCGTTTTATAACTGCTGATCGGTTCTCCCCAGAGTGTCTTCTTGACTACCTGGACCTCTCATCAGAGTACACCACTCTTGAAATAGCTAACAGGATTGAGGCTGCTGCACACATTTGGAGACAGAAACACCTCAAACGCCATCTGAAGCCTGCGAAATCTGGTAAGTCATCCTGGGGTGGAAAGGTCAAGGGATTGGTTGGTGACATGGATAAATGTAAGCTTCTAGCCTCCCGAGCCGATACCATCTTACAGAATCTAAGGATACAGTTCCCTGGCCTCCCACAGATGGCTCTGGACATGAGCAAGATTCAGTATAACAAGGATGTGGGGCACTCACTCCTTGAGAGCTATTCCAGGGTCATGGAAAGCTTAGCCTTCAACATAATGGCAAGGATTGATGATCTTCTATACGTAGACGATGCCAGCAGGCAACGTGCAGCTGCAATGTCGATGTCTCTATATGAGCAAAGAAGGTTTGGTGCCGCCTTGCCAAAACAGAAGAGGCTGTTGAGGAGTCCTTTCTCAATTCAACACAACTCTTGTGGCCCTTCAACTACAATACCGGCAATGGATGATCCTCCCTTTCAGATAGCGAGAAGCCCTGGCGGAAGAAGGCATCAGTCTACAAACGACAGTAATTTAAATGACTTGCTGCATGAGAAGTTAGAAAATTTTACTTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PRONE

Protein Analysis

597

Amino Acids

66.57

Weight (kDa)

5.56

Isoelectric Point (pI)

57.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PRONE	PF03759	102 - 141	2.7e-18	PRONE (Plant-specific Rop nucleotide exchanger)
PRONE	PF03759	179 - 513	3.2e-146	PRONE (Plant-specific Rop nucleotide exchanger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004730)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G38430
fragaria_vesca	FvH4_2g15940 FvH4_2g37830 FvH4_2g37830
malus_domestica	MD05G1128400.v1.1 MD08G1005700.v1.1 MD10G1131700.v1.1
prunus_persica	Prupe.1G357600_v2.0.a1 Prupe.8G172500_v2.0.a1
pyrus_communis	pycom05g12430 pycom08g00440 pycom10g11270
rosa_chinensis	RchiOBHm_Chr6g0279461 RchiOBHm_Chr6g0303881
rosa_laevigata	RLG00000011038 RLG00000013145
rosa_multiflora	Rmu_sc0000274.1_g000004 Rmu_sc0004644.1_g000003 Rmu_sc0007179.1_g000004
rosa_roxburghii	Rroxscaffold_7G00164340 Rroxscaffold_7G00188890
rosa_rugosa	Rorug06G0124300 Rorug06G0325500 Rorug06G0325500
rosa_samantha	Rh6AG439800 Rh6BG238000 Rh6BG463200 Rh6CG452100 Rh6DG439000
rosa_wichuraiana	Rw6G020390 Rw6G038080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1118
Acc16I	TGCGCA	1 cut(s)	985
Acc36I	ACCTGC	1 cut(s)	745
AccB1I	GGYRCC	3 cut(s)	577, 600, 1589
AccBSI	CCGCTC	2 cut(s)	61, 714
AccI	GTMKAC	3 cut(s)	877, 1524, 1733
AccIII	TCCGGA	1 cut(s)	182
AciI	CCGC	6 cut(s)	61, 176, 211, 712, 1593, 1716
AclWI	GGATC	3 cut(s)	726, 988, 1679
AcoI	YGGCCR	1 cut(s)	1011
AcsI	RAATTY	3 cut(s)	434, 668, 1780
AcuI	CTGAAG	1 cut(s)	1274
AfaI	GTAC	3 cut(s)	118, 927, 1178
AflII	CTTAAG	1 cut(s)	998
AgsI	TTSAA	7 cut(s)	314, 515, 885, 1190, 1489, 1640, 1662
AhlI	ACTAGT	1 cut(s)	113
AjiI	CACGTC	1 cut(s)	43
AjnI	CCWGG	6 cut(s)	673, 1158, 1280, 1381, 1463, 1711
Alw21I	GWGCWC	1 cut(s)	651
Alw26I	GTCTC	3 cut(s)	22, 1222, 1569
AlwI	GGATC	3 cut(s)	726, 988, 1679
AlwNI	CAGNNNCTG	1 cut(s)	542
Ama87I	CYCGRG	1 cut(s)	1341
Aor13HI	TCCGGA	1 cut(s)	182
AoxI	GGCC	5 cut(s)	240, 1002, 1011, 1384, 1654
ApeKI	GCWGC	9 cut(s)	223, 536, 763, 967, 1211, 1214, 1547, 1550, 1762
ApoI	RAATTY	3 cut(s)	434, 668, 1780
AspLEI	GCGC	2 cut(s)	223, 986
AspS9I	GGNCC	3 cut(s)	185, 1162, 1655
AsuHPI	GGTGA	1 cut(s)	1322
AvaI	CYCGRG	1 cut(s)	1341
AvaII	GGWCC	2 cut(s)	185, 1162
BaeGI	GKGCMC	1 cut(s)	1443
BalI	TGGCCA	1 cut(s)	1013
BanI	GGYRCC	3 cut(s)	577, 600, 1589
BanII	GRGCYC	1 cut(s)	651
BbsI	GAAGAC	3 cut(s)	45, 293, 1139
Bbv12I	GWGCWC	1 cut(s)	651
BbvI	GCAGC	9 cut(s)	210, 548, 750, 979, 1198, 1201, 1537, 1559, 1749
BccI	CCATC	7 cut(s)	416, 664, 773, 1022, 1257, 1361, 1390
BceAI	ACGGC	1 cut(s)	234
BcgI	CGANNNNNNTGC	2 cut(s)	131, 165
BciT130I	CCWGG	6 cut(s)	675, 1160, 1282, 1383, 1465, 1713
BciVI	GTATCC	1 cut(s)	1365
BcoDI	GTCTC	3 cut(s)	22, 1222, 1569
BcuI	ACTAGT	1 cut(s)	113
BfaI	CTAG	4 cut(s)	114, 120, 1094, 1334
BfmI	CTRYAG	2 cut(s)	73, 973
BfoI	RGCGCY	1 cut(s)	224
BfrI	CTTAAG	1 cut(s)	998
BfuAI	ACCTGC	1 cut(s)	745
BfuI	GTATCC	1 cut(s)	1365
BglI	GCCNNNNNGGC	1 cut(s)	1010
BlpI	GCTNAGC	2 cut(s)	767, 1480
BmcAI	AGTACT	1 cut(s)	118
Bme1390I	CCNGG	6 cut(s)	675, 1160, 1282, 1383, 1465, 1713
Bme18I	GGWCC	2 cut(s)	185, 1162
BmeT110I	CYCGRG	1 cut(s)	1341
BmgBI	CACGTC	1 cut(s)	43
BmgT120I	GGNCC	3 cut(s)	185, 1162, 1655
BmiI	GGNNCC	5 cut(s)	570, 579, 602, 911, 1591
BmrFI	CCNGG	6 cut(s)	675, 1160, 1282, 1383, 1465, 1713
BmsI	GCATC	4 cut(s)	745, 1042, 1519, 1735
BpiI	GAAGAC	3 cut(s)	45, 293, 1139
Bpu1102I	GCTNAGC	2 cut(s)	767, 1480
BpuEI	CTTGAG	4 cut(s)	73, 648, 728, 1472
BsaAI	YACGTR	1 cut(s)	1522
BsaJI	CCNNGG	7 cut(s)	673, 814, 1008, 1281, 1381, 1464, 1711
BsaWI	WCCGGW	2 cut(s)	182, 187
Bse118I	RCCGGY	3 cut(s)	226, 238, 1672
Bse1I	ACTGG	1 cut(s)	756
Bse3DI	GCAATG	6 cut(s)	379, 600, 765, 962, 1560, 1683
BseAI	TCCGGA	1 cut(s)	182
BseBI	CCWGG	6 cut(s)	675, 1160, 1282, 1383, 1465, 1713
BseDI	CCNNGG	7 cut(s)	673, 814, 1008, 1281, 1381, 1464, 1711
BseGI	GGATG	5 cut(s)	760, 784, 1277, 1438, 1687
BseMI	GCAATG	6 cut(s)	379, 600, 765, 962, 1560, 1683
BseMII	CTCAG	2 cut(s)	282, 297
BseNI	ACTGG	1 cut(s)	756
BseRI	GAGGAG	1 cut(s)	1636
BseSI	GKGCMC	1 cut(s)	1443
BseXI	GCAGC	9 cut(s)	210, 548, 750, 979, 1198, 1201, 1537, 1559, 1749
BsgI	GTGCAG	4 cut(s)	367, 555, 1200, 1566
BshFI	GGCC	5 cut(s)	242, 1004, 1013, 1386, 1656
BshNI	GGYRCC	3 cut(s)	577, 600, 1589
BsiHKAI	GWGCWC	1 cut(s)	651
BsiHKCI	CYCGRG	1 cut(s)	1341
BsiSI	CCGG	6 cut(s)	183, 188, 227, 239, 272, 1673
BslFI	GGGAC	2 cut(s)	693, 697
BsmAI	GTCTC	3 cut(s)	22, 1222, 1569
BsmBI	CGTCTC	1 cut(s)	22
BsmFI	GGGAC	2 cut(s)	693, 697
BsmI	GAATGC	1 cut(s)	986
BsnI	GGCC	5 cut(s)	242, 1004, 1013, 1386, 1656
BsoBI	CYCGRG	1 cut(s)	1341
Bsp1286I	GDGCHC	2 cut(s)	651, 1443
Bsp13I	TCCGGA	1 cut(s)	182
Bsp143I	GATC	6 cut(s)	718, 860, 993, 1126, 1510, 1684
Bsp1720I	GCTNAGC	2 cut(s)	767, 1480
Bsp19I	CCATGG	1 cut(s)	1008
BspACI	CCGC	6 cut(s)	61, 176, 211, 712, 1593, 1716
BspANI	GGCC	5 cut(s)	242, 1004, 1013, 1386, 1656
BspCNI	CTCAG	2 cut(s)	283, 298
BspEI	TCCGGA	1 cut(s)	182
BspLI	GGNNCC	5 cut(s)	570, 579, 602, 911, 1591
BspMI	ACCTGC	1 cut(s)	745
BspPI	GGATC	3 cut(s)	726, 988, 1679
BspT107I	GGYRCC	3 cut(s)	577, 600, 1589
BspTI	CTTAAG	1 cut(s)	998
BsrBI	CCGCTC	2 cut(s)	61, 714
BsrDI	GCAATG	6 cut(s)	379, 600, 765, 962, 1560, 1683
BsrFI	RCCGGY	3 cut(s)	226, 238, 1672
BsrI	ACTGG	1 cut(s)	756
BssAI	RCCGGY	3 cut(s)	226, 238, 1672
BssECI	CCNNGG	7 cut(s)	673, 814, 1008, 1281, 1381, 1464, 1711
BssMI	GATC	6 cut(s)	718, 860, 993, 1126, 1510, 1684
BssT1I	CCWWGG	1 cut(s)	1008
Bst2UI	CCWGG	6 cut(s)	675, 1160, 1282, 1383, 1465, 1713
Bst4CI	ACNGT	5 cut(s)	544, 974, 1112, 1377, 1745
Bst6I	CTCTTC	3 cut(s)	874, 891, 1604
BstAFI	CTTAAG	1 cut(s)	998
BstBAI	YACGTR	1 cut(s)	1522
BstC8I	GCNNGC	7 cut(s)	59, 240, 1032, 1070, 1260, 1534, 1538
BstDEI	CTNAG	5 cut(s)	291, 306, 767, 1367, 1480
BstDSI	CCRYGG	1 cut(s)	1008
BstF5I	GGATG	5 cut(s)	760, 784, 1277, 1438, 1687
BstH2I	RGCGCY	1 cut(s)	224
BstHHI	GCGC	2 cut(s)	223, 986
BstKTI	GATC	6 cut(s)	721, 863, 996, 1129, 1513, 1687
BstMAI	GTCTC	3 cut(s)	22, 1222, 1569
BstMBI	GATC	6 cut(s)	718, 860, 993, 1126, 1510, 1684
BstMWI	GCNNNNNNNGC	2 cut(s)	1010, 1343
BstNI	CCWGG	6 cut(s)	675, 1160, 1282, 1383, 1465, 1713
BstSCI	CCNGG	6 cut(s)	673, 1158, 1280, 1381, 1463, 1711
BstSFI	CTRYAG	2 cut(s)	73, 973
BstSLI	GKGCMC	1 cut(s)	1443
BstSNI	TACGTA	1 cut(s)	1522
BstV1I	GCAGC	9 cut(s)	210, 548, 750, 979, 1198, 1201, 1537, 1559, 1749
BstV2I	GAAGAC	3 cut(s)	45, 293, 1139
BstX2I	RGATCY	2 cut(s)	718, 993
BstXI	CCANNNNNNTGG	1 cut(s)	1471
BstYI	RGATCY	2 cut(s)	718, 993
BsuI	GTATCC	1 cut(s)	1365
BsuRI	GGCC	5 cut(s)	242, 1004, 1013, 1386, 1656
BtgI	CCRYGG	1 cut(s)	1008
BtgZI	GCGATG	1 cut(s)	290
BtrI	CACGTC	1 cut(s)	43
BtsCI	GGATG	5 cut(s)	760, 784, 1277, 1438, 1687
BtsI	GCAGTG	1 cut(s)	384
BtsIMutI	CAGTG	2 cut(s)	384, 970
BveI	ACCTGC	1 cut(s)	745
Cac8I	GCNNGC	7 cut(s)	59, 240, 1032, 1070, 1260, 1534, 1538
CaiI	CAGNNNCTG	1 cut(s)	542
CfoI	GCGC	2 cut(s)	223, 986
Cfr10I	RCCGGY	3 cut(s)	226, 238, 1672
Cfr13I	GGNCC	3 cut(s)	185, 1162, 1655
CpoI	CGGWCCG	1 cut(s)	185
Csp6I	GTAC	3 cut(s)	117, 926, 1177
CspCI	CAANNNNNGTGG	2 cut(s)	1633, 1668
CspI	CGGWCCG	1 cut(s)	185
CviAII	CATG	8 cut(s)	149, 163, 232, 1009, 1315, 1408, 1471, 1766
CviQI	GTAC	3 cut(s)	117, 926, 1177
DdeI	CTNAG	5 cut(s)	291, 306, 767, 1367, 1480
DpnI	GATC	6 cut(s)	720, 862, 995, 1128, 1512, 1686
DpnII	GATC	6 cut(s)	718, 860, 993, 1126, 1510, 1684
DraI	TTTAAA	1 cut(s)	1752
EaeI	YGGCCR	1 cut(s)	1011
Eam1104I	CTCTTC	3 cut(s)	874, 891, 1604
EarI	CTCTTC	3 cut(s)	874, 891, 1604
EciI	GGCGGA	1 cut(s)	1731
Ecl136II	GAGCTC	1 cut(s)	649
Eco105I	TACGTA	1 cut(s)	1522
Eco130I	CCWWGG	1 cut(s)	1008
Eco147I	AGGCCT	1 cut(s)	1004
Eco24I	GRGCYC	1 cut(s)	651
Eco47I	GGWCC	2 cut(s)	185, 1162
Eco53kI	GAGCTC	1 cut(s)	649
Eco57I	CTGAAG	1 cut(s)	1274
Eco88I	CYCGRG	1 cut(s)	1341
EcoICRI	GAGCTC	1 cut(s)	649
EcoRI	GAATTC	1 cut(s)	668
EcoRII	CCWGG	6 cut(s)	673, 1158, 1280, 1381, 1463, 1711
EcoT14I	CCWWGG	1 cut(s)	1008
EcoT38I	GRGCYC	1 cut(s)	651
ErhI	CCWWGG	1 cut(s)	1008
Esp3I	CGTCTC	1 cut(s)	22
FaeI	CATG	8 cut(s)	152, 166, 235, 1012, 1318, 1411, 1474, 1769
FaqI	GGGAC	2 cut(s)	693, 697
FatI	CATG	8 cut(s)	148, 162, 231, 1008, 1314, 1407, 1470, 1765
FauI	CCCGC	1 cut(s)	719
FblI	GTMKAC	3 cut(s)	877, 1524, 1733
FokI	GGATG	5 cut(s)	767, 791, 1264, 1445, 1694
FriOI	GRGCYC	1 cut(s)	651
FspAI	RTGCGCAY	1 cut(s)	985
FspBI	CTAG	4 cut(s)	114, 120, 1094, 1334
FspI	TGCGCA	1 cut(s)	985
GlaI	GCGC	2 cut(s)	222, 985
HaeII	RGCGCY	1 cut(s)	224
HaeIII	GGCC	5 cut(s)	242, 1004, 1013, 1386, 1656
HapII	CCGG	6 cut(s)	183, 188, 227, 239, 272, 1673
HhaI	GCGC	2 cut(s)	223, 986
Hin1II	CATG	8 cut(s)	152, 166, 235, 1012, 1318, 1411, 1474, 1769
Hin6I	GCGC	2 cut(s)	221, 984
HinP1I	GCGC	2 cut(s)	221, 984
HincII	GTYRAC	2 cut(s)	13, 811
HindII	GTYRAC	2 cut(s)	13, 811
HindIII	AAGCTT	4 cut(s)	338, 1086, 1328, 1477
HinfI	GANTC	7 cut(s)	98, 378, 635, 791, 1363, 1417, 1624
HpaII	CCGG	6 cut(s)	183, 188, 227, 239, 272, 1673
HphI	GGTGA	1 cut(s)	1322
Hpy166II	GTNNAC	7 cut(s)	13, 254, 811, 878, 1179, 1525, 1734
Hpy8I	GTNNAC	7 cut(s)	13, 254, 811, 878, 1179, 1525, 1734
Hpy99I	CGWCG	1 cut(s)	31
HpyCH4III	ACNGT	5 cut(s)	544, 974, 1112, 1377, 1745
HpyCH4IV	ACGT	6 cut(s)	15, 42, 90, 256, 1521, 1543
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1010, 1343
HpyF3I	CTNAG	5 cut(s)	291, 306, 767, 1367, 1480
HpySE526I	ACGT	6 cut(s)	15, 42, 90, 256, 1521, 1543
Hsp92II	CATG	8 cut(s)	152, 166, 235, 1012, 1318, 1411, 1474, 1769
HspAI	GCGC	2 cut(s)	221, 984
Kpn2I	TCCGGA	1 cut(s)	182
KroI	GCCGGC	1 cut(s)	238
KroNI	GCCGGC	1 cut(s)	240
Kzo9I	GATC	6 cut(s)	718, 860, 993, 1126, 1510, 1684
LmnI	GCTCC	2 cut(s)	568, 915
Lsp1109I	GCAGC	9 cut(s)	210, 548, 750, 979, 1198, 1201, 1537, 1559, 1749
LweI	GCATC	4 cut(s)	745, 1042, 1519, 1735
MaeI	CTAG	4 cut(s)	114, 120, 1094, 1334
MaeII	ACGT	6 cut(s)	15, 42, 90, 256, 1521, 1543
MaeIII	GTNAC	2 cut(s)	700, 1310
MalI	GATC	6 cut(s)	720, 862, 995, 1128, 1512, 1686
MbiI	CCGCTC	2 cut(s)	61, 714
MboI	GATC	6 cut(s)	718, 860, 993, 1126, 1510, 1684
MflI	RGATCY	2 cut(s)	718, 993
MhlI	GDGCHC	2 cut(s)	651, 1443
MlsI	TGGCCA	1 cut(s)	1013
MluNI	TGGCCA	1 cut(s)	1013
MlyI	GAGTC	3 cut(s)	107, 387, 1633
MmeI	TCCRAC	4 cut(s)	9, 81, 113, 546
Mox20I	TGGCCA	1 cut(s)	1013
MroI	TCCGGA	1 cut(s)	182
MroNI	GCCGGC	1 cut(s)	238
MscI	TGGCCA	1 cut(s)	1013
MseI	TTAA	2 cut(s)	999, 1751
Msp20I	TGGCCA	1 cut(s)	1013
MspA1I	CMGCKG	1 cut(s)	1550
MspCI	CTTAAG	1 cut(s)	998
MspI	CCGG	6 cut(s)	183, 188, 227, 239, 272, 1673
MspR9I	CCNGG	6 cut(s)	675, 1160, 1282, 1383, 1465, 1713
Mva1269I	GAATGC	1 cut(s)	986
MvaI	CCWGG	6 cut(s)	675, 1160, 1282, 1383, 1465, 1713
MwoI	GCNNNNNNNGC	2 cut(s)	1010, 1343
NaeI	GCCGGC	1 cut(s)	240
NcoI	CCATGG	1 cut(s)	1008
NdeII	GATC	6 cut(s)	718, 860, 993, 1126, 1510, 1684
NgoMIV	GCCGGC	1 cut(s)	238
NlaIII	CATG	8 cut(s)	152, 166, 235, 1012, 1318, 1411, 1474, 1769
NlaIV	GGNNCC	5 cut(s)	570, 579, 602, 911, 1591
NmeAIII	GCCGAG	1 cut(s)	629
NmuCI	GTSAC	2 cut(s)	700, 1310
NsbI	TGCGCA	1 cut(s)	985
PceI	AGGCCT	1 cut(s)	1004
PctI	GAATGC	1 cut(s)	986
PdiI	GCCGGC	1 cut(s)	240
PfeI	GAWTC	4 cut(s)	635, 791, 1363, 1417
PleI	GAGTC	3 cut(s)	106, 386, 1632
PpsI	GAGTC	3 cut(s)	106, 386, 1632
Ppu21I	YACGTR	1 cut(s)	1522
PsiI	TTATAA	1 cut(s)	1118
Psp124BI	GAGCTC	1 cut(s)	651
Psp6I	CCWGG	6 cut(s)	673, 1158, 1280, 1381, 1463, 1711
PspGI	CCWGG	6 cut(s)	673, 1158, 1280, 1381, 1463, 1711
PspN4I	GGNNCC	5 cut(s)	570, 579, 602, 911, 1591
PspPI	GGNCC	3 cut(s)	185, 1162, 1655
PstNI	CAGNNNCTG	1 cut(s)	542
PsuI	RGATCY	2 cut(s)	718, 993
PvuII	CAGCTG	1 cut(s)	1550
RsaI	GTAC	3 cut(s)	118, 927, 1178
RsaNI	GTAC	3 cut(s)	117, 926, 1177
Rsr2I	CGGWCCG	1 cut(s)	185
RsrII	CGGWCCG	1 cut(s)	185
SacI	GAGCTC	1 cut(s)	651
SaqAI	TTAA	2 cut(s)	999, 1751
Sau3AI	GATC	6 cut(s)	718, 860, 993, 1126, 1510, 1684
Sau96I	GGNCC	3 cut(s)	185, 1162, 1655
ScaI	AGTACT	1 cut(s)	118
SchI	GAGTC	3 cut(s)	107, 387, 1633
ScrFI	CCNGG	6 cut(s)	675, 1160, 1282, 1383, 1465, 1713
SduI	GDGCHC	2 cut(s)	651, 1443
SfaNI	GCATC	4 cut(s)	745, 1042, 1519, 1735
SfcI	CTRYAG	2 cut(s)	73, 973
SfiI	GGCCNNNNNGGCC	1 cut(s)	1010
SinI	GGWCC	2 cut(s)	185, 1162
SmiI	ATTTAAAT	1 cut(s)	1752
SmlI	CTYRAG	5 cut(s)	52, 663, 743, 998, 1451
SmoI	CTYRAG	5 cut(s)	52, 663, 743, 998, 1451
SnaBI	TACGTA	1 cut(s)	1522
SpeI	ACTAGT	1 cut(s)	113
SseBI	AGGCCT	1 cut(s)	1004
SsiI	CCGC	6 cut(s)	61, 176, 211, 712, 1593, 1716
SspMI	CTAG	4 cut(s)	114, 120, 1094, 1334
SstI	GAGCTC	1 cut(s)	651
StuI	AGGCCT	1 cut(s)	1004
StyD4I	CCNGG	6 cut(s)	673, 1158, 1280, 1381, 1463, 1711
StyI	CCWWGG	1 cut(s)	1008
SwaI	ATTTAAAT	1 cut(s)	1752
TaaI	ACNGT	5 cut(s)	544, 974, 1112, 1377, 1745
TaiI	ACGT	6 cut(s)	18, 45, 93, 259, 1524, 1546
TaqI	TCGA	2 cut(s)	66, 1559
TaqII	GACCGA	1 cut(s)	828
TatI	WGTACW	2 cut(s)	116, 1176
TauI	GCSGC	2 cut(s)	178, 1595
TfiI	GAWTC	4 cut(s)	635, 791, 1363, 1417
Tru1I	TTAA	2 cut(s)	999, 1751
Tru9I	TTAA	2 cut(s)	999, 1751
TscAI	CASTG	2 cut(s)	391, 977
TseFI	GTSAC	2 cut(s)	700, 1310
TseI	GCWGC	9 cut(s)	223, 536, 763, 967, 1211, 1214, 1547, 1550, 1762
Tsp45I	GTSAC	2 cut(s)	700, 1310
TspDTI	ATGAA	2 cut(s)	51, 335
TspGWI	ACGGA	1 cut(s)	296
TspRI	CASTG	2 cut(s)	391, 977
Vha464I	CTTAAG	1 cut(s)	998
VpaK11BI	GGWCC	2 cut(s)	185, 1162
XapI	RAATTY	3 cut(s)	434, 668, 1780
XmiI	GTMKAC	3 cut(s)	877, 1524, 1733
XspI	CTAG	4 cut(s)	114, 120, 1094, 1334
ZrmI	AGTACT	1 cut(s)	118

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.