Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0004730

Physical Location & Seq

Genomic Coordinates Reverse (-)

42587217 .. 42590738

Gene Structure 3522 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ25061

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1707 bp

ATGGGGAGTGTGTCGTCCGACGACGGCTCCGACCAGCAGAGCGATCGGTGTGGGAGCTACAGCCTCAGCGCCGACGTGAGTGAGTCCGAGAGCTGTAGTAGCTTCTCGTGCCGTAGATTTGATGCGGAAGGCGCTTCCAGCTCAATGACGTCATCTCCGAGGCCGGCTGCCGGGAGTTTCTGCGTTCAGGCGCCGGTGATGCTGCCGGTGATTGGAGGAAAGGATGTGGTGGCTTGGGATGAGAAGCCTGAGAAACGAAACGCCGATTTATCAGAGGTTGAAATGATGAAGGAGAGGTTCGCTAAGCTTCTGCTGGGAGAAGACATGTCTGGAGGAGGAAAAGGGGTCTGCACTGCCCTTGCTATCTCAAATGCCATCACCAATCTCTCTGCTACTGTGTTTGGTGAGCTATGGAGGTTAGAGCCACTAGCACCACAGAAGAGGGCAATGTGGCGCCGGGAAATGGAGTGGCTCTTATGTGTGAGTGATTCAATTGTCGAGCTTGTACCTTCAATACAGCAGTTCCCTGGTGGAGGCACATATGAAGTGATGGCGATGCGGCCACGCTCTGACTTGTATGTGAATCTCCCTGCCATAAAGAAGCTCGACGCAATGCTGCTCAGTATACTTGATGGGTTCTGTGATACTGAGTTTTGGTATGTTGACCGGGGGATAATTTTGGGCGATTCTAATGAAAATGAGGGGTTCATGTCTAGTGGAAGGCCTTCAATTAGGCAGGAGGAGAAGTGGTGGCTGCCATACCCAAAAGTTCCGCCAAATGCATTGTCTGCTGATGCAAGGAAGAAGTTGCAGCAGTGTAGGGACTGCTGCAACCAGATACTGAAGGCGGCCATGGCAATTAATAGTAGTGTGCTCGCCGAGATGGAAATCCCCAGGGCATACATGGAGTCACTGCCCAAGAACGGGAAAGAGTGCCTGGGTGATATCATTTATCGCTACATAACTGCTGATAAGTTTTCACCTGAATGCCTTCTGGATTGCCTGGACTTGTCATCAGAGCATCAAACTCTGGAGATTGCCAACAGGATTGAGGCAGCTGTGCATGTTTGGAAGCAGAAAGACCATAAGAAACAAAATAATCATGTGAAAGCTAAAAGGTCATCTTGGGGTGGTAAGGTCAAGGGCCTTGTTTCTGACACTGAAAAAAATCATTTTCTAGCTCAACGAGCAGAGACCCTTTTGCAAAGTCTAAGGCATCGTTTCCCTGGTCTCCCACAAACTTCTCTGGACATGAACAAAATACAGTATAACAAGGATGTGGGGCAATCAATTCTTGAAAGCTACTCGAGGGTCATGGAGAGCTTGGCCTTTAACATTATGGCAAGGATCGATGATGTCCTCTTCGTAGATGATGCTACCAAGCGATGCGCGGCAGCAGAATCAGTTTCTCTCTTCAGCAGGGGAGGTTTGGGTGGTGTTCCTATCCAGAAGAGGATGTCACCTAGCCCCTTTTCCATTCAACAGACTCCTTATGCCTCCCCACTAGCAACTCCAACCTTCTGTTCCTCCACTCCTGTTATTGGAAGTCCAGGTAGGACACCTCTTTGTGTAAAGCGGAACGTCGTGAAAGAGGCACCTGACGTGAAATCAGAAAAAATAAACGCGGATGAATTTGAGAGGGTGTGGTCATATGCTGGGAACATCAGCTCTAGAAGATCTACCGGAGATGCTCCTGAGCGGGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0001558 GO:0003006 GO:0003674 GO:0005085 GO:0005088 GO:0005089 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0008150 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0010769 GO:0010817 GO:0016020 GO:0016043 GO:0016049 GO:0016324 GO:0017016 GO:0017048 GO:0019899 GO:0022414 GO:0022603 GO:0022604 GO:0030154 GO:0031267 GO:0032092 GO:0032501 GO:0032502 GO:0032879 GO:0032989 GO:0040007 GO:0040008 GO:0043393 GO:0043900 GO:0044093 GO:0044425 GO:0044459 GO:0044464 GO:0044706 GO:0045177 GO:0045595 GO:0048468 GO:0048518 GO:0048588 GO:0048589 GO:0048638 GO:0048856 GO:0048868 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051020 GO:0051049 GO:0051098 GO:0051099 GO:0051128 GO:0051239 GO:0051510 GO:0051704 GO:0060284 GO:0060560 GO:0065007 GO:0065008 GO:0065009 GO:0071840 GO:0071944 GO:0080092 GO:0098590 GO:0098772 GO:1904424 GO:1904426 GO:1904475 GO:1904477 GO:1905097 GO:1905099 GO:2000012 GO:2000241 GO:2001106 GO:2001108

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PRONE

Protein Analysis

568

Amino Acids

62.78

Weight (kDa)

6.04

Isoelectric Point (pI)

60.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PRONE	PF03759	91 - 461	1.6e-181	PRONE (Plant-specific Rop nucleotide exchanger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004730)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G38430
fragaria_vesca	FvH4_2g15940 FvH4_2g37830 FvH4_2g37830
malus_domestica	MD05G1128400.v1.1 MD08G1005700.v1.1 MD10G1131700.v1.1
prunus_persica	Prupe.1G357600_v2.0.a1 Prupe.8G172500_v2.0.a1
pyrus_communis	pycom05g12430 pycom08g00440 pycom10g11270
rosa_chinensis	RchiOBHm_Chr6g0279461 RchiOBHm_Chr6g0303881
rosa_laevigata	RLG00000011038 RLG00000013145
rosa_multiflora	Rmu_sc0000274.1_g000004 Rmu_sc0004644.1_g000003 Rmu_sc0007179.1_g000004
rosa_roxburghii	Rroxscaffold_7G00164340 Rroxscaffold_7G00188890
rosa_rugosa	Rorug06G0124300 Rorug06G0325500 Rorug06G0325500
rosa_samantha	Rh6AG439800 Rh6BG238000 Rh6BG463200 Rh6CG452100 Rh6DG439000
rosa_wichuraiana	Rw6G020390 Rw6G038080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	152
AccB1I	GGYRCC	3 cut(s)	190, 453, 1594
AccBSI	CCGCTC	1 cut(s)	1699
AccI	GTMKAC	1 cut(s)	625
AccII	CGCG	2 cut(s)	1391, 1625
AciI	CCGC	8 cut(s)	125, 559, 773, 848, 1391, 1576, 1625, 1699
AclWI	GGATC	1 cut(s)	1355
AcoI	YGGCCR	2 cut(s)	560, 849
AcsI	RAATTY	1 cut(s)	1631
AcuI	CTGAAG	2 cut(s)	863, 1399
AcyI	GRCGYC	3 cut(s)	149, 191, 454
AfaI	GTAC	1 cut(s)	507
AfiI	CCNNNNNNNGG	7 cut(s)	170, 212, 463, 533, 923, 924, 1541
AflIII	ACRYGT	1 cut(s)	324
AgsI	TTSAA	6 cut(s)	281, 492, 513, 729, 1298, 1481
AjiI	CACGTC	2 cut(s)	76, 1603
AjnI	CCWGG	6 cut(s)	526, 893, 936, 1002, 1225, 1549
AjuI	GAANNNNNNNTTGG	2 cut(s)	1507, 1539
Alw21I	GWGCWC	1 cut(s)	876
Alw26I	GTCTC	2 cut(s)	1187, 1235
AlwI	GGATC	1 cut(s)	1355
AlwNI	CAGNNNCTG	1 cut(s)	841
Ama87I	CYCGRG	1 cut(s)	1306
AoxI	GGCC	6 cut(s)	161, 560, 722, 849, 1144, 1326
ApeKI	GCWGC	8 cut(s)	167, 202, 616, 754, 811, 828, 1055, 1394
ApoI	RAATTY	1 cut(s)	1631
ArsI	GACNNNNNNTTYG	2 cut(s)	770, 802
AseI	ATTAAT	1 cut(s)	861
Asp700I	GAANNNNTTC	2 cut(s)	724, 990
AspLEI	GCGC	5 cut(s)	71, 134, 193, 456, 1391
AspS9I	GGNCC	1 cut(s)	1144
AsuC2I	CCSGG	3 cut(s)	172, 458, 668
AsuHPI	GGTGA	7 cut(s)	208, 220, 370, 416, 953, 972, 1452
AvaI	CYCGRG	1 cut(s)	1306
BanI	GGYRCC	3 cut(s)	190, 453, 1594
BauI	CACGAG	1 cut(s)	106
BbsI	GAAGAC	1 cut(s)	327
Bbv12I	GWGCWC	1 cut(s)	876
BbvCI	CCTCAGC	1 cut(s)	65
BbvI	GCAGC	8 cut(s)	154, 189, 603, 741, 815, 823, 1067, 1406
BccI	CCATC	4 cut(s)	383, 544, 626, 877
BceAI	ACGGC	2 cut(s)	40, 96
BcgI	CGANNNNNNTGC	2 cut(s)	26, 60
BciT130I	CCWGG	6 cut(s)	528, 895, 938, 1004, 1227, 1551
BcnI	CCSGG	3 cut(s)	172, 458, 668
BcoDI	GTCTC	2 cut(s)	1187, 1235
BfaI	CTAG	6 cut(s)	428, 714, 1178, 1464, 1505, 1671
BfmI	CTRYAG	2 cut(s)	58, 94
BfoI	RGCGCY	4 cut(s)	72, 135, 194, 457
BglII	AGATCT	1 cut(s)	1676
BlpI	GCTNAGC	1 cut(s)	303
Bme1390I	CCNGG	9 cut(s)	172, 458, 528, 668, 895, 938, 1004, 1227, 1551
BmeT110I	CYCGRG	1 cut(s)	1306
BmgBI	CACGTC	2 cut(s)	76, 1603
BmgT120I	GGNCC	1 cut(s)	1144
BmiI	GGNNCC	4 cut(s)	28, 192, 455, 1596
BmrFI	CCNGG	9 cut(s)	172, 458, 528, 668, 895, 938, 1004, 1227, 1551
BmsI	GCATC	9 cut(s)	112, 189, 546, 784, 1030, 1225, 1363, 1376, 1678
BpiI	GAAGAC	1 cut(s)	327
BpmI	CTGGAG	2 cut(s)	351, 1052
Bpu10I	CCTNAGC	2 cut(s)	65, 1695
Bpu1102I	GCTNAGC	1 cut(s)	303
BpuMI	CCSGG	3 cut(s)	172, 458, 668
Bsa29I	ATCGAT	1 cut(s)	1350
BsaBI	GATNNNNATC	1 cut(s)	887
BsaHI	GRCGYC	3 cut(s)	149, 191, 454
BsaI	GGTCTC	2 cut(s)	1187, 1235
BsaJI	CCNNGG	8 cut(s)	158, 526, 667, 852, 893, 894, 937, 1225
BsaWI	WCCGGW	1 cut(s)	1682
BsaXI	ACNNNNNCTCC	8 cut(s)	11, 41, 139, 169, 731, 734, 761, 764
Bsc4I	CCNNNNNNNGG	7 cut(s)	170, 212, 463, 533, 923, 924, 1541
Bse118I	RCCGGY	3 cut(s)	163, 193, 205
Bse3DI	GCAATG	2 cut(s)	453, 618
Bse8I	GATNNNNATC	1 cut(s)	887
BseBI	CCWGG	6 cut(s)	528, 895, 938, 1004, 1227, 1551
BseCI	ATCGAT	1 cut(s)	1350
BseDI	CCNNGG	8 cut(s)	158, 526, 667, 852, 893, 894, 937, 1225
BseGI	GGATG	5 cut(s)	229, 244, 1282, 1461, 1633
BseJI	GATNNNNATC	1 cut(s)	887
BseLI	CCNNNNNNNGG	7 cut(s)	170, 212, 463, 533, 923, 924, 1541
BseMI	GCAATG	2 cut(s)	453, 618
BseMII	CTCAG	5 cut(s)	79, 240, 634, 639, 1686
BseRI	GAGGAG	2 cut(s)	348, 755
BseXI	GCAGC	8 cut(s)	154, 189, 603, 741, 815, 823, 1067, 1406
BseYI	CCCAGC	2 cut(s)	313, 1655
BsgI	GTGCAG	1 cut(s)	334
Bsh1236I	CGCG	2 cut(s)	1391, 1625
Bsh1285I	CGRYCG	1 cut(s)	46
BshFI	GGCC	6 cut(s)	163, 562, 724, 851, 1146, 1328
BshNI	GGYRCC	3 cut(s)	190, 453, 1594
BshVI	ATCGAT	1 cut(s)	1350
BsiEI	CGRYCG	1 cut(s)	46
BsiHKAI	GWGCWC	1 cut(s)	876
BsiHKCI	CYCGRG	1 cut(s)	1306
BsiSI	CCGG	7 cut(s)	164, 171, 194, 206, 457, 667, 1683
BslFI	GGGAC	1 cut(s)	836
BslI	CCNNNNNNNGG	7 cut(s)	170, 212, 463, 533, 923, 924, 1541
BsmAI	GTCTC	2 cut(s)	1187, 1235
BsmFI	GGGAC	1 cut(s)	836
BsmI	GAATGC	1 cut(s)	992
BsnI	GGCC	6 cut(s)	163, 562, 724, 851, 1146, 1328
Bso31I	GGTCTC	2 cut(s)	1187, 1235
BsoBI	CYCGRG	1 cut(s)	1306
Bsp1286I	GDGCHC	1 cut(s)	876
Bsp143I	GATC	3 cut(s)	43, 1347, 1676
Bsp1720I	GCTNAGC	1 cut(s)	303
Bsp19I	CCATGG	1 cut(s)	852
BspACI	CCGC	8 cut(s)	125, 559, 773, 848, 1391, 1576, 1625, 1699
BspANI	GGCC	6 cut(s)	163, 562, 724, 851, 1146, 1328
BspCNI	CTCAG	5 cut(s)	78, 241, 633, 640, 1687
BspDI	ATCGAT	1 cut(s)	1350
BspFNI	CGCG	2 cut(s)	1391, 1625
BspLI	GGNNCC	4 cut(s)	28, 192, 455, 1596
BspPI	GGATC	1 cut(s)	1355
BspT107I	GGYRCC	3 cut(s)	190, 453, 1594
BspTNI	GGTCTC	2 cut(s)	1187, 1235
BsrBI	CCGCTC	1 cut(s)	1699
BsrDI	GCAATG	2 cut(s)	453, 618
BsrFI	RCCGGY	3 cut(s)	163, 193, 205
BssAI	RCCGGY	3 cut(s)	163, 193, 205
BssECI	CCNNGG	8 cut(s)	158, 526, 667, 852, 893, 894, 937, 1225
BssMI	GATC	3 cut(s)	43, 1347, 1676
BssNAI	GTATAC	1 cut(s)	626
BssNI	GRCGYC	3 cut(s)	149, 191, 454
BssSI	CACGAG	1 cut(s)	106
BssT1I	CCWWGG	1 cut(s)	852
Bst1107I	GTATAC	1 cut(s)	626
Bst2BI	CACGAG	1 cut(s)	106
Bst2UI	CCWGG	6 cut(s)	528, 895, 938, 1004, 1227, 1551
Bst4CI	ACNGT	2 cut(s)	397, 1266
Bst6I	CTCTTC	4 cut(s)	434, 1367, 1418, 1445
BstACI	GRCGYC	3 cut(s)	149, 191, 454
BstAPI	GCANNNNNTGC	1 cut(s)	788
BstC8I	GCNNGC	2 cut(s)	165, 876
BstDEI	CTNAG	7 cut(s)	65, 249, 303, 620, 648, 1211, 1695
BstDSI	CCRYGG	1 cut(s)	852
BstENI	CCTNNNNNAGG	1 cut(s)	531
BstF5I	GGATG	5 cut(s)	229, 244, 1282, 1461, 1633
BstFNI	CGCG	2 cut(s)	1391, 1625
BstH2I	RGCGCY	4 cut(s)	72, 135, 194, 457
BstHHI	GCGC	5 cut(s)	71, 134, 193, 456, 1391
BstKTI	GATC	3 cut(s)	46, 1350, 1679
BstMAI	GTCTC	2 cut(s)	1187, 1235
BstMBI	GATC	3 cut(s)	43, 1347, 1676
BstMCI	CGRYCG	1 cut(s)	46
BstMWI	GCNNNNNNNGC	8 cut(s)	99, 108, 131, 138, 199, 788, 854, 1187
BstNI	CCWGG	6 cut(s)	528, 895, 938, 1004, 1227, 1551
BstNSI	RCATGY	2 cut(s)	328, 1067
BstSCI	CCNGG	9 cut(s)	170, 456, 526, 666, 893, 936, 1002, 1225, 1549
BstSFI	CTRYAG	2 cut(s)	58, 94
BstUI	CGCG	2 cut(s)	1391, 1625
BstV1I	GCAGC	8 cut(s)	154, 189, 603, 741, 815, 823, 1067, 1406
BstV2I	GAAGAC	1 cut(s)	327
BstX2I	RGATCY	1 cut(s)	1676
BstYI	RGATCY	1 cut(s)	1676
BstZ17I	GTATAC	1 cut(s)	626
Bsu15I	ATCGAT	1 cut(s)	1350
BsuRI	GGCC	6 cut(s)	163, 562, 724, 851, 1146, 1328
BsuTUI	ATCGAT	1 cut(s)	1350
BtgI	CCRYGG	1 cut(s)	852
BtgZI	GCGATG	2 cut(s)	569, 1399
BtrI	CACGTC	2 cut(s)	76, 1603
BtsCI	GGATG	5 cut(s)	229, 244, 1282, 1461, 1633
BtsI	GCAGTG	3 cut(s)	351, 821, 911
BtsIMutI	CAGTG	4 cut(s)	351, 821, 911, 1158
Cac8I	GCNNGC	2 cut(s)	165, 876
CaiI	CAGNNNCTG	1 cut(s)	841
CfoI	GCGC	5 cut(s)	71, 134, 193, 456, 1391
Cfr10I	RCCGGY	3 cut(s)	163, 193, 205
Cfr13I	GGNCC	1 cut(s)	1144
ClaI	ATCGAT	1 cut(s)	1350
CseI	GACGC	1 cut(s)	617
Csp6I	GTAC	1 cut(s)	506
CviAII	CATG	8 cut(s)	325, 709, 853, 904, 1064, 1103, 1252, 1315
CviQI	GTAC	1 cut(s)	506
DdeI	CTNAG	7 cut(s)	65, 249, 303, 620, 648, 1211, 1695
DinI	GGCGCC	2 cut(s)	192, 455
DpnI	GATC	3 cut(s)	45, 1349, 1678
DpnII	GATC	3 cut(s)	43, 1347, 1676
EaeI	YGGCCR	2 cut(s)	560, 849
Eam1104I	CTCTTC	4 cut(s)	434, 1367, 1418, 1445
EarI	CTCTTC	4 cut(s)	434, 1367, 1418, 1445
EciI	GGCGGA	1 cut(s)	762
Eco130I	CCWWGG	1 cut(s)	852
Eco147I	AGGCCT	1 cut(s)	724
Eco31I	GGTCTC	2 cut(s)	1187, 1235
Eco32I	GATATC	1 cut(s)	946
Eco57I	CTGAAG	2 cut(s)	863, 1399
Eco88I	CYCGRG	1 cut(s)	1306
EcoNI	CCTNNNNNAGG	1 cut(s)	531
EcoO109I	RGGNCCY	1 cut(s)	1144
EcoRII	CCWGG	6 cut(s)	526, 893, 936, 1002, 1225, 1549
EcoRV	GATATC	1 cut(s)	946
EcoT14I	CCWWGG	1 cut(s)	852
EcoT22I	ATGCAT	1 cut(s)	784
EgeI	GGCGCC	2 cut(s)	192, 455
EheI	GGCGCC	2 cut(s)	192, 455
ErhI	CCWWGG	1 cut(s)	852
FaeI	CATG	8 cut(s)	328, 712, 856, 907, 1067, 1106, 1255, 1318
FalI	AAGNNNNNCTT	2 cut(s)	1108, 1140
FaqI	GGGAC	1 cut(s)	836
FatI	CATG	8 cut(s)	324, 708, 852, 903, 1063, 1102, 1251, 1314
FauI	CCCGC	1 cut(s)	1692
FauNDI	CATATG	2 cut(s)	541, 1651
FblI	GTMKAC	1 cut(s)	625
FokI	GGATG	5 cut(s)	236, 251, 1289, 1468, 1640
FspBI	CTAG	6 cut(s)	428, 714, 1178, 1464, 1505, 1671
GlaI	GCGC	5 cut(s)	70, 133, 192, 455, 1390
GsaI	CCCAGC	2 cut(s)	317, 1659
GsuI	CTGGAG	2 cut(s)	351, 1052
HaeII	RGCGCY	4 cut(s)	72, 135, 194, 457
HaeIII	GGCC	6 cut(s)	163, 562, 724, 851, 1146, 1328
HapII	CCGG	7 cut(s)	164, 171, 194, 206, 457, 667, 1683
HgaI	GACGC	1 cut(s)	617
HhaI	GCGC	5 cut(s)	71, 134, 193, 456, 1391
Hin1I	GRCGYC	3 cut(s)	149, 191, 454
Hin1II	CATG	8 cut(s)	328, 712, 856, 907, 1067, 1106, 1255, 1318
Hin6I	GCGC	5 cut(s)	69, 132, 191, 454, 1389
HinP1I	GCGC	5 cut(s)	69, 132, 191, 454, 1389
HincII	GTYRAC	1 cut(s)	664
HindII	GTYRAC	1 cut(s)	664
HindIII	AAGCTT	1 cut(s)	305
HinfI	GANTC	7 cut(s)	83, 488, 583, 686, 908, 1400, 1486
HpaII	CCGG	7 cut(s)	164, 171, 194, 206, 457, 667, 1683
HphI	GGTGA	7 cut(s)	208, 220, 370, 416, 953, 972, 1452
Hpy166II	GTNNAC	2 cut(s)	626, 664
Hpy188I	TCNGA	9 cut(s)	19, 31, 88, 159, 274, 571, 1018, 1156, 1612
Hpy188III	TCNNGA	9 cut(s)	330, 995, 1031, 1247, 1295, 1447, 1585, 1671, 1694
Hpy8I	GTNNAC	2 cut(s)	626, 664
Hpy99I	CGWCG	5 cut(s)	23, 26, 77, 611, 1586
HpyAV	CCTTC	8 cut(s)	122, 283, 519, 714, 735, 838, 1001, 1528
HpyCH4III	ACNGT	2 cut(s)	397, 1266
HpyCH4IV	ACGT	4 cut(s)	75, 149, 1581, 1602
HpyCH4V	TGCA	7 cut(s)	351, 782, 797, 811, 831, 1063, 1204
HpyF10VI	GCNNNNNNNGC	8 cut(s)	99, 108, 131, 138, 199, 788, 854, 1187
HpyF3I	CTNAG	7 cut(s)	65, 249, 303, 620, 648, 1211, 1695
HpySE526I	ACGT	4 cut(s)	75, 149, 1581, 1602
Hsp92I	GRCGYC	3 cut(s)	149, 191, 454
Hsp92II	CATG	8 cut(s)	328, 712, 856, 907, 1067, 1106, 1255, 1318
HspAI	GCGC	5 cut(s)	69, 132, 191, 454, 1389
KasI	GGCGCC	2 cut(s)	190, 453
KroI	GCCGGC	1 cut(s)	163
KroNI	GCCGGC	1 cut(s)	165
Kzo9I	GATC	3 cut(s)	43, 1347, 1676
LmnI	GCTCC	3 cut(s)	32, 54, 1696
Lsp1109I	GCAGC	8 cut(s)	154, 189, 603, 741, 815, 823, 1067, 1406
LweI	GCATC	9 cut(s)	112, 189, 546, 784, 1030, 1225, 1363, 1376, 1678
MaeI	CTAG	6 cut(s)	428, 714, 1178, 1464, 1505, 1671
MaeII	ACGT	4 cut(s)	75, 149, 1581, 1602
MaeIII	GTNAC	2 cut(s)	909, 1458
MalI	GATC	3 cut(s)	45, 1349, 1678
MbiI	CCGCTC	1 cut(s)	1699
MboI	GATC	3 cut(s)	43, 1347, 1676
MboII	GAAGA	7 cut(s)	332, 451, 814, 1354, 1405, 1462, 1686
MfeI	CAATTG	1 cut(s)	492
MflI	RGATCY	1 cut(s)	1676
MhlI	GDGCHC	1 cut(s)	876
MluCI	AATT	6 cut(s)	492, 675, 729, 858, 1290, 1631
Mly113I	GGCGCC	2 cut(s)	191, 454
MlyI	GAGTC	3 cut(s)	92, 917, 1480
MmeI	TCCRAC	3 cut(s)	42, 54, 1538
Mph1103I	ATGCAT	1 cut(s)	784
MroNI	GCCGGC	1 cut(s)	163
MroXI	GAANNNNTTC	2 cut(s)	724, 990
MseI	TTAA	2 cut(s)	861, 1332
MslI	CAYNNNNRTG	1 cut(s)	985
MspA1I	CMGCKG	1 cut(s)	1058
MspI	CCGG	7 cut(s)	164, 171, 194, 206, 457, 667, 1683
MspR9I	CCNGG	9 cut(s)	172, 458, 528, 668, 895, 938, 1004, 1227, 1551
MunI	CAATTG	1 cut(s)	492
Mva1269I	GAATGC	1 cut(s)	992
MvaI	CCWGG	6 cut(s)	528, 895, 938, 1004, 1227, 1551
MvnI	CGCG	2 cut(s)	1391, 1625
MwoI	GCNNNNNNNGC	8 cut(s)	99, 108, 131, 138, 199, 788, 854, 1187
NaeI	GCCGGC	1 cut(s)	165
NarI	GGCGCC	2 cut(s)	191, 454
NciI	CCSGG	3 cut(s)	172, 458, 668
NcoI	CCATGG	1 cut(s)	852
NdeI	CATATG	2 cut(s)	541, 1651
NdeII	GATC	3 cut(s)	43, 1347, 1676
NgoMIV	GCCGGC	1 cut(s)	163
NlaIII	CATG	8 cut(s)	328, 712, 856, 907, 1067, 1106, 1255, 1318
NlaIV	GGNNCC	4 cut(s)	28, 192, 455, 1596
NmeAIII	GCCGAG	1 cut(s)	904
NmuCI	GTSAC	2 cut(s)	909, 1458
NsiI	ATGCAT	1 cut(s)	784
NspI	RCATGY	2 cut(s)	328, 1067
PaeR7I	CTCGAG	1 cut(s)	1306
PasI	CCCWGGG	1 cut(s)	894
PceI	AGGCCT	1 cut(s)	724
PciI	ACATGT	1 cut(s)	324
PcsI	WCGNNNNNNNCGW	2 cut(s)	27, 155
PctI	GAATGC	1 cut(s)	992
PdiI	GCCGGC	1 cut(s)	165
PdmI	GAANNNNTTC	2 cut(s)	724, 990
PfeI	GAWTC	4 cut(s)	488, 583, 686, 1400
Ple19I	CGATCG	1 cut(s)	46
PleI	GAGTC	3 cut(s)	91, 916, 1480
PluTI	GGCGCC	2 cut(s)	194, 457
PpsI	GAGTC	3 cut(s)	91, 916, 1480
PscI	ACATGT	1 cut(s)	324
PshBI	ATTAAT	1 cut(s)	861
Psp6I	CCWGG	6 cut(s)	526, 893, 936, 1002, 1225, 1549
PspFI	CCCAGC	2 cut(s)	313, 1655
PspGI	CCWGG	6 cut(s)	526, 893, 936, 1002, 1225, 1549
PspN4I	GGNNCC	4 cut(s)	28, 192, 455, 1596
PspPI	GGNCC	1 cut(s)	1144
PspXI	VCTCGAGB	1 cut(s)	1306
PstNI	CAGNNNCTG	1 cut(s)	841
PsuI	RGATCY	1 cut(s)	1676
PvuI	CGATCG	1 cut(s)	46
PvuII	CAGCTG	1 cut(s)	1058
RsaI	GTAC	1 cut(s)	507
RsaNI	GTAC	1 cut(s)	506
RseI	CAYNNNNRTG	1 cut(s)	985
SaqAI	TTAA	2 cut(s)	861, 1332
Sau3AI	GATC	3 cut(s)	43, 1347, 1676
Sau96I	GGNCC	1 cut(s)	1144
SchI	GAGTC	3 cut(s)	92, 917, 1480
ScrFI	CCNGG	9 cut(s)	172, 458, 528, 668, 895, 938, 1004, 1227, 1551
SduI	GDGCHC	1 cut(s)	876
SfaNI	GCATC	9 cut(s)	112, 189, 546, 784, 1030, 1225, 1363, 1376, 1678
SfcI	CTRYAG	2 cut(s)	58, 94
SfoI	GGCGCC	2 cut(s)	192, 455
Sfr274I	CTCGAG	1 cut(s)	1306
SgrAI	CRCCGGYG	1 cut(s)	193
SlaI	CTCGAG	1 cut(s)	1306
SmiMI	CAYNNNNRTG	1 cut(s)	985
SmlI	CTYRAG	1 cut(s)	1306
SmoI	CTYRAG	1 cut(s)	1306
Sse9I	AATT	6 cut(s)	492, 675, 729, 858, 1290, 1631
SseBI	AGGCCT	1 cut(s)	724
SsiI	CCGC	8 cut(s)	125, 559, 773, 848, 1391, 1576, 1625, 1699
SspDI	GGCGCC	2 cut(s)	190, 453
SspMI	CTAG	6 cut(s)	428, 714, 1178, 1464, 1505, 1671
StuI	AGGCCT	1 cut(s)	724
StyD4I	CCNGG	9 cut(s)	170, 456, 526, 666, 893, 936, 1002, 1225, 1549
StyI	CCWWGG	1 cut(s)	852
TaaI	ACNGT	2 cut(s)	397, 1266
TaiI	ACGT	4 cut(s)	78, 152, 1584, 1605
TaqI	TCGA	4 cut(s)	498, 606, 1307, 1350
TasI	AATT	6 cut(s)	492, 675, 729, 858, 1290, 1631
TauI	GCSGC	3 cut(s)	562, 851, 1394
TfiI	GAWTC	4 cut(s)	488, 583, 686, 1400
Tru1I	TTAA	2 cut(s)	861, 1332
Tru9I	TTAA	2 cut(s)	861, 1332
TscAI	CASTG	4 cut(s)	358, 821, 918, 1165
TseFI	GTSAC	2 cut(s)	909, 1458
TseI	GCWGC	8 cut(s)	167, 202, 616, 754, 811, 828, 1055, 1394
Tsp45I	GTSAC	2 cut(s)	909, 1458
TspDTI	ATGAA	6 cut(s)	302, 558, 697, 708, 1268, 1644
TspRI	CASTG	4 cut(s)	358, 821, 918, 1165
VspI	ATTAAT	1 cut(s)	861
XagI	CCTNNNNNAGG	1 cut(s)	531
XapI	RAATTY	1 cut(s)	1631
XbaI	TCTAGA	1 cut(s)	1670
XceI	RCATGY	2 cut(s)	328, 1067
XcmI	CCANNNNNNNNNTGG	1 cut(s)	901
XhoI	CTCGAG	1 cut(s)	1306
XmiI	GTMKAC	1 cut(s)	625
XmnI	GAANNNNTTC	2 cut(s)	724, 990
XspI	CTAG	6 cut(s)	428, 714, 1178, 1464, 1505, 1671
ZraI	GACGTC	1 cut(s)	150
Zsp2I	ATGCAT	1 cut(s)	784

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.