asparagine--tRNA ligase, cytoplasmic
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G07420 AT3G07420 |
| fragaria_vesca | FvH4_2g17960 |
| malus_domestica | MD05G1163500.v1.1 MD10G1153300.v1.1 |
| prunus_persica | Prupe.8G192100_v2.0.a1 |
| pyrus_communis | pycom05g15290 pycom10g13220 |
| rosa_chinensis | RchiOBHm_Chr6g0283201 |
| rosa_laevigata | RLG00000012837 |
| rosa_multiflora | Rmu_sc0006459.1_g000001 Rmu_sc0013038.1_g000019 |
| rosa_roxburghii | Rroxscaffold_2G00106680 Rroxscaffold_7G00185650 |
| rosa_rugosa | Rorug06G0152600 |
| rosa_samantha | Rh6AG265000 Rh6BG267900 Rh6CG267100 Rh6DG260300 |
| rosa_wichuraiana | Rw6G022970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 803 |
| Acc36I | ACCTGC | 1 cut(s) | 803 |
| AciI | CCGC | 4 cut(s) | 306, 309, 344, 676 |
| AclWI | GGATC | 1 cut(s) | 1743 |
| AcoI | YGGCCR | 1 cut(s) | 310 |
| AcsI | RAATTY | 3 cut(s) | 249, 1325, 1398 |
| AcuI | CTGAAG | 4 cut(s) | 239, 398, 1335, 1431 |
| AfaI | GTAC | 8 cut(s) | 59, 244, 510, 549, 741, 1623, 1721, 1730 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 115, 1631, 1660 |
| AflIII | ACRYGT | 1 cut(s) | 598 |
| AhlI | ACTAGT | 1 cut(s) | 794 |
| AjnI | CCWGG | 1 cut(s) | 786 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 71, 103, 890, 922 |
| Alw21I | GWGCWC | 1 cut(s) | 643 |
| Alw26I | GTCTC | 2 cut(s) | 37, 264 |
| AlwI | GGATC | 1 cut(s) | 1743 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 29 |
| AoxI | GGCC | 5 cut(s) | 106, 206, 310, 840, 1810 |
| ApeKI | GCWGC | 9 cut(s) | 23, 341, 695, 884, 956, 1199, 1475, 1604, 1650 |
| ApoI | RAATTY | 3 cut(s) | 249, 1325, 1398 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 252 |
| AspLEI | GCGC | 2 cut(s) | 685, 1668 |
| AspS9I | GGNCC | 1 cut(s) | 1157 |
| AsuC2I | CCSGG | 1 cut(s) | 68 |
| AsuHPI | GGTGA | 5 cut(s) | 134, 160, 209, 827, 1387 |
| AvaII | GGWCC | 1 cut(s) | 1157 |
| BaeGI | GKGCMC | 2 cut(s) | 186, 1135 |
| BanII | GRGCYC | 1 cut(s) | 643 |
| BbsI | GAAGAC | 2 cut(s) | 367, 1358 |
| Bbv12I | GWGCWC | 1 cut(s) | 643 |
| BbvI | GCAGC | 9 cut(s) | 35, 328, 707, 871, 943, 1186, 1462, 1616, 1662 |
| BccI | CCATC | 3 cut(s) | 95, 386, 1583 |
| BceAI | ACGGC | 1 cut(s) | 589 |
| BciT130I | CCWGG | 1 cut(s) | 788 |
| BciVI | GTATCC | 2 cut(s) | 258, 535 |
| BclI | TGATCA | 1 cut(s) | 199 |
| BcnI | CCSGG | 1 cut(s) | 68 |
| BcoDI | GTCTC | 2 cut(s) | 37, 264 |
| BcuI | ACTAGT | 1 cut(s) | 794 |
| BfaI | CTAG | 5 cut(s) | 110, 437, 795, 869, 1870 |
| BfmI | CTRYAG | 2 cut(s) | 957, 1200 |
| BfuAI | ACCTGC | 1 cut(s) | 803 |
| BfuI | GTATCC | 2 cut(s) | 258, 535 |
| BglII | AGATCT | 3 cut(s) | 291, 1492, 1515 |
| BlpI | GCTNAGC | 1 cut(s) | 1705 |
| BmcAI | AGTACT | 1 cut(s) | 59 |
| Bme1390I | CCNGG | 2 cut(s) | 68, 788 |
| Bme18I | GGWCC | 1 cut(s) | 1157 |
| BmgT120I | GGNCC | 1 cut(s) | 1157 |
| BmiI | GGNNCC | 2 cut(s) | 828, 1159 |
| BmrFI | CCNGG | 2 cut(s) | 68, 788 |
| BmsI | GCATC | 7 cut(s) | 668, 943, 1001, 1120, 1240, 1411, 1677 |
| BpiI | GAAGAC | 2 cut(s) | 367, 1358 |
| BpmI | CTGGAG | 4 cut(s) | 356, 479, 1060, 1136 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1705 |
| BpuEI | CTTGAG | 3 cut(s) | 905, 1262, 1799 |
| BpuMI | CCSGG | 1 cut(s) | 68 |
| BsaJI | CCNNGG | 4 cut(s) | 159, 651, 718, 1135 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 132, 162 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 115, 1631, 1660 |
| Bse118I | RCCGGY | 1 cut(s) | 1743 |
| Bse1I | ACTGG | 2 cut(s) | 469, 1813 |
| Bse3DI | GCAATG | 3 cut(s) | 24, 685, 843 |
| BseBI | CCWGG | 1 cut(s) | 788 |
| BseDI | CCNNGG | 4 cut(s) | 159, 651, 718, 1135 |
| BseGI | GGATG | 4 cut(s) | 106, 958, 1218, 1255 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 115, 1631, 1660 |
| BseMI | GCAATG | 3 cut(s) | 24, 685, 843 |
| BseMII | CTCAG | 3 cut(s) | 524, 1053, 1487 |
| BseNI | ACTGG | 2 cut(s) | 469, 1813 |
| BseRI | GAGGAG | 4 cut(s) | 351, 839, 1196, 1676 |
| BseSI | GKGCMC | 2 cut(s) | 186, 1135 |
| BseXI | GCAGC | 9 cut(s) | 35, 328, 707, 871, 943, 1186, 1462, 1616, 1662 |
| BsgI | GTGCAG | 2 cut(s) | 983, 1284 |
| BshFI | GGCC | 5 cut(s) | 108, 208, 312, 842, 1812 |
| BsiHKAI | GWGCWC | 1 cut(s) | 643 |
| BsiSI | CCGG | 2 cut(s) | 67, 1744 |
| BslFI | GGGAC | 2 cut(s) | 1143, 1171 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 115, 1631, 1660 |
| BsmAI | GTCTC | 2 cut(s) | 37, 264 |
| BsmFI | GGGAC | 2 cut(s) | 1143, 1171 |
| BsmI | GAATGC | 1 cut(s) | 1113 |
| BsnI | GGCC | 5 cut(s) | 108, 208, 312, 842, 1812 |
| Bsp1286I | GDGCHC | 3 cut(s) | 186, 643, 1135 |
| Bsp143I | GATC | 8 cut(s) | 199, 227, 291, 1360, 1492, 1515, 1735, 1786 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1705 |
| Bsp19I | CCATGG | 1 cut(s) | 718 |
| BspACI | CCGC | 4 cut(s) | 306, 309, 344, 676 |
| BspANI | GGCC | 5 cut(s) | 108, 208, 312, 842, 1812 |
| BspCNI | CTCAG | 3 cut(s) | 525, 1054, 1488 |
| BspLI | GGNNCC | 2 cut(s) | 828, 1159 |
| BspMAI | CTGCAG | 2 cut(s) | 961, 1204 |
| BspMI | ACCTGC | 1 cut(s) | 803 |
| BspPI | GGATC | 1 cut(s) | 1743 |
| BsrDI | GCAATG | 3 cut(s) | 24, 685, 843 |
| BsrFI | RCCGGY | 1 cut(s) | 1743 |
| BsrI | ACTGG | 2 cut(s) | 469, 1813 |
| BssAI | RCCGGY | 1 cut(s) | 1743 |
| BssECI | CCNNGG | 4 cut(s) | 159, 651, 718, 1135 |
| BssMI | GATC | 8 cut(s) | 199, 227, 291, 1360, 1492, 1515, 1735, 1786 |
| BssT1I | CCWWGG | 3 cut(s) | 159, 718, 1135 |
| Bst2UI | CCWGG | 1 cut(s) | 788 |
| Bst6I | CTCTTC | 1 cut(s) | 417 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 953, 1421 |
| BstC8I | GCNNGC | 2 cut(s) | 452, 1745 |
| BstDEI | CTNAG | 5 cut(s) | 533, 728, 1062, 1496, 1705 |
| BstDSI | CCRYGG | 2 cut(s) | 651, 718 |
| BstF5I | GGATG | 4 cut(s) | 106, 958, 1218, 1255 |
| BstHHI | GCGC | 2 cut(s) | 685, 1668 |
| BstKTI | GATC | 8 cut(s) | 202, 230, 294, 1363, 1495, 1518, 1738, 1789 |
| BstMAI | GTCTC | 2 cut(s) | 37, 264 |
| BstMBI | GATC | 8 cut(s) | 199, 227, 291, 1360, 1492, 1515, 1735, 1786 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 23, 953, 1421 |
| BstNI | CCWGG | 1 cut(s) | 788 |
| BstNSI | RCATGY | 1 cut(s) | 1199 |
| BstSCI | CCNGG | 2 cut(s) | 66, 786 |
| BstSFI | CTRYAG | 2 cut(s) | 957, 1200 |
| BstSLI | GKGCMC | 2 cut(s) | 186, 1135 |
| BstV1I | GCAGC | 9 cut(s) | 35, 328, 707, 871, 943, 1186, 1462, 1616, 1662 |
| BstV2I | GAAGAC | 2 cut(s) | 367, 1358 |
| BstX2I | RGATCY | 4 cut(s) | 291, 1492, 1515, 1735 |
| BstYI | RGATCY | 4 cut(s) | 291, 1492, 1515, 1735 |
| BsuI | GTATCC | 2 cut(s) | 258, 535 |
| BsuRI | GGCC | 5 cut(s) | 108, 208, 312, 842, 1812 |
| BtgI | CCRYGG | 2 cut(s) | 651, 718 |
| BtsCI | GGATG | 4 cut(s) | 106, 958, 1218, 1255 |
| BtsI | GCAGTG | 1 cut(s) | 966 |
| BtsIMutI | CAGTG | 6 cut(s) | 369, 394, 781, 966, 1407, 1806 |
| BveI | ACCTGC | 1 cut(s) | 803 |
| Cac8I | GCNNGC | 2 cut(s) | 452, 1745 |
| CaiI | CAGNNNCTG | 1 cut(s) | 29 |
| CfoI | GCGC | 2 cut(s) | 685, 1668 |
| Cfr10I | RCCGGY | 1 cut(s) | 1743 |
| Cfr13I | GGNCC | 1 cut(s) | 1157 |
| Csp6I | GTAC | 8 cut(s) | 58, 243, 509, 548, 740, 1622, 1720, 1729 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 636, 671 |
| CviAII | CATG | 4 cut(s) | 512, 719, 1196, 1748 |
| CviQI | GTAC | 8 cut(s) | 58, 243, 509, 548, 740, 1622, 1720, 1729 |
| DdeI | CTNAG | 5 cut(s) | 533, 728, 1062, 1496, 1705 |
| DpnI | GATC | 8 cut(s) | 201, 229, 293, 1362, 1494, 1517, 1737, 1788 |
| DpnII | GATC | 8 cut(s) | 199, 227, 291, 1360, 1492, 1515, 1735, 1786 |
| EaeI | YGGCCR | 1 cut(s) | 310 |
| Eam1104I | CTCTTC | 1 cut(s) | 417 |
| EarI | CTCTTC | 1 cut(s) | 417 |
| Ecl136II | GAGCTC | 1 cut(s) | 641 |
| Eco130I | CCWWGG | 3 cut(s) | 159, 718, 1135 |
| Eco24I | GRGCYC | 1 cut(s) | 643 |
| Eco32I | GATATC | 1 cut(s) | 1615 |
| Eco47I | GGWCC | 1 cut(s) | 1157 |
| Eco53kI | GAGCTC | 1 cut(s) | 641 |
| Eco57I | CTGAAG | 4 cut(s) | 239, 398, 1335, 1431 |
| EcoICRI | GAGCTC | 1 cut(s) | 641 |
| EcoRII | CCWGG | 1 cut(s) | 786 |
| EcoRV | GATATC | 1 cut(s) | 1615 |
| EcoT14I | CCWWGG | 3 cut(s) | 159, 718, 1135 |
| EcoT22I | ATGCAT | 1 cut(s) | 1113 |
| EcoT38I | GRGCYC | 1 cut(s) | 643 |
| ErhI | CCWWGG | 3 cut(s) | 159, 718, 1135 |
| FaeI | CATG | 4 cut(s) | 515, 722, 1199, 1751 |
| FaqI | GGGAC | 2 cut(s) | 1143, 1171 |
| FatI | CATG | 4 cut(s) | 511, 718, 1195, 1747 |
| FbaI | TGATCA | 1 cut(s) | 199 |
| FokI | GGATG | 4 cut(s) | 113, 965, 1225, 1262 |
| FriOI | GRGCYC | 1 cut(s) | 643 |
| FspBI | CTAG | 5 cut(s) | 110, 437, 795, 869, 1870 |
| GlaI | GCGC | 2 cut(s) | 684, 1667 |
| GsuI | CTGGAG | 4 cut(s) | 356, 479, 1060, 1136 |
| HaeIII | GGCC | 5 cut(s) | 108, 208, 312, 842, 1812 |
| HapII | CCGG | 2 cut(s) | 67, 1744 |
| HhaI | GCGC | 2 cut(s) | 685, 1668 |
| Hin1II | CATG | 4 cut(s) | 515, 722, 1199, 1751 |
| Hin6I | GCGC | 2 cut(s) | 683, 1666 |
| HinP1I | GCGC | 2 cut(s) | 683, 1666 |
| HincII | GTYRAC | 1 cut(s) | 1045 |
| HindII | GTYRAC | 1 cut(s) | 1045 |
| HinfI | GANTC | 8 cut(s) | 5, 428, 672, 745, 771, 1184, 1341, 1770 |
| HpaII | CCGG | 2 cut(s) | 67, 1744 |
| HphI | GGTGA | 5 cut(s) | 134, 160, 209, 827, 1387 |
| Hpy166II | GTNNAC | 2 cut(s) | 1045, 1147 |
| Hpy188I | TCNGA | 5 cut(s) | 10, 232, 264, 1063, 1497 |
| Hpy8I | GTNNAC | 2 cut(s) | 1045, 1147 |
| HpyAV | CCTTC | 8 cut(s) | 90, 375, 479, 851, 886, 1426, 1621, 1849 |
| HpyCH4IV | ACGT | 1 cut(s) | 598 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 23, 953, 1421 |
| HpyF3I | CTNAG | 5 cut(s) | 533, 728, 1062, 1496, 1705 |
| HpySE526I | ACGT | 1 cut(s) | 598 |
| Hsp92II | CATG | 4 cut(s) | 515, 722, 1199, 1751 |
| HspAI | GCGC | 2 cut(s) | 683, 1666 |
| KroI | GCCGGC | 1 cut(s) | 1743 |
| KroNI | GCCGGC | 1 cut(s) | 1745 |
| Ksp22I | TGATCA | 1 cut(s) | 199 |
| Kzo9I | GATC | 8 cut(s) | 199, 227, 291, 1360, 1492, 1515, 1735, 1786 |
| LmnI | GCTCC | 4 cut(s) | 445, 498, 826, 1663 |
| Lsp1109I | GCAGC | 9 cut(s) | 35, 328, 707, 871, 943, 1186, 1462, 1616, 1662 |
| LweI | GCATC | 7 cut(s) | 668, 943, 1001, 1120, 1240, 1411, 1677 |
| MaeI | CTAG | 5 cut(s) | 110, 437, 795, 869, 1870 |
| MaeII | ACGT | 1 cut(s) | 598 |
| MaeIII | GTNAC | 3 cut(s) | 790, 902, 1435 |
| MalI | GATC | 8 cut(s) | 201, 229, 293, 1362, 1494, 1517, 1737, 1788 |
| MboI | GATC | 8 cut(s) | 199, 227, 291, 1360, 1492, 1515, 1735, 1786 |
| MfeI | CAATTG | 2 cut(s) | 282, 1258 |
| MflI | RGATCY | 4 cut(s) | 291, 1492, 1515, 1735 |
| MhlI | GDGCHC | 3 cut(s) | 186, 643, 1135 |
| MlyI | GAGTC | 1 cut(s) | 1193 |
| MmeI | TCCRAC | 3 cut(s) | 118, 588, 981 |
| Mph1103I | ATGCAT | 1 cut(s) | 1113 |
| MroNI | GCCGGC | 1 cut(s) | 1743 |
| MroXI | GAANNNNTTC | 1 cut(s) | 252 |
| MseI | TTAA | 8 cut(s) | 275, 617, 879, 971, 1053, 1481, 1692, 1758 |
| MspA1I | CMGCKG | 1 cut(s) | 240 |
| MspI | CCGG | 2 cut(s) | 67, 1744 |
| MspR9I | CCNGG | 2 cut(s) | 68, 788 |
| MunI | CAATTG | 2 cut(s) | 282, 1258 |
| Mva1269I | GAATGC | 1 cut(s) | 1113 |
| MvaI | CCWGG | 1 cut(s) | 788 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 23, 953, 1421 |
| NaeI | GCCGGC | 1 cut(s) | 1745 |
| NciI | CCSGG | 1 cut(s) | 68 |
| NcoI | CCATGG | 1 cut(s) | 718 |
| NdeII | GATC | 8 cut(s) | 199, 227, 291, 1360, 1492, 1515, 1735, 1786 |
| NgoMIV | GCCGGC | 1 cut(s) | 1743 |
| NlaIII | CATG | 4 cut(s) | 515, 722, 1199, 1751 |
| NlaIV | GGNNCC | 2 cut(s) | 828, 1159 |
| NsiI | ATGCAT | 1 cut(s) | 1113 |
| NspI | RCATGY | 1 cut(s) | 1199 |
| PaqCI | CACCTGC | 1 cut(s) | 803 |
| PctI | GAATGC | 1 cut(s) | 1113 |
| PdiI | GCCGGC | 1 cut(s) | 1745 |
| PdmI | GAANNNNTTC | 1 cut(s) | 252 |
| PfeI | GAWTC | 7 cut(s) | 5, 428, 672, 745, 771, 1341, 1770 |
| PleI | GAGTC | 1 cut(s) | 1192 |
| PpsI | GAGTC | 1 cut(s) | 1192 |
| Psp124BI | GAGCTC | 1 cut(s) | 643 |
| Psp6I | CCWGG | 1 cut(s) | 786 |
| PspGI | CCWGG | 1 cut(s) | 786 |
| PspN4I | GGNNCC | 2 cut(s) | 828, 1159 |
| PspPI | GGNCC | 1 cut(s) | 1157 |
| PstI | CTGCAG | 2 cut(s) | 961, 1204 |
| PstNI | CAGNNNCTG | 1 cut(s) | 29 |
| PsuI | RGATCY | 4 cut(s) | 291, 1492, 1515, 1735 |
| PvuII | CAGCTG | 1 cut(s) | 240 |
| RsaI | GTAC | 8 cut(s) | 59, 244, 510, 549, 741, 1623, 1721, 1730 |
| RsaNI | GTAC | 8 cut(s) | 58, 243, 509, 548, 740, 1622, 1720, 1729 |
| SacI | GAGCTC | 1 cut(s) | 643 |
| SaqAI | TTAA | 8 cut(s) | 275, 617, 879, 971, 1053, 1481, 1692, 1758 |
| Sau3AI | GATC | 8 cut(s) | 199, 227, 291, 1360, 1492, 1515, 1735, 1786 |
| Sau96I | GGNCC | 1 cut(s) | 1157 |
| ScaI | AGTACT | 1 cut(s) | 59 |
| SchI | GAGTC | 1 cut(s) | 1193 |
| ScrFI | CCNGG | 2 cut(s) | 68, 788 |
| SduI | GDGCHC | 3 cut(s) | 186, 643, 1135 |
| SfaNI | GCATC | 7 cut(s) | 668, 943, 1001, 1120, 1240, 1411, 1677 |
| SfcI | CTRYAG | 2 cut(s) | 957, 1200 |
| SinI | GGWCC | 1 cut(s) | 1157 |
| SmlI | CTYRAG | 3 cut(s) | 920, 1277, 1778 |
| SmoI | CTYRAG | 3 cut(s) | 920, 1277, 1778 |
| SpeI | ACTAGT | 1 cut(s) | 794 |
| SsiI | CCGC | 4 cut(s) | 306, 309, 344, 676 |
| SspMI | CTAG | 5 cut(s) | 110, 437, 795, 869, 1870 |
| SstI | GAGCTC | 1 cut(s) | 643 |
| StyD4I | CCNGG | 2 cut(s) | 66, 786 |
| StyI | CCWWGG | 3 cut(s) | 159, 718, 1135 |
| TaiI | ACGT | 1 cut(s) | 601 |
| TaqI | TCGA | 6 cut(s) | 62, 528, 637, 643, 1105, 1344 |
| TatI | WGTACW | 2 cut(s) | 57, 547 |
| TauI | GCSGC | 2 cut(s) | 309, 312 |
| TfiI | GAWTC | 7 cut(s) | 5, 428, 672, 745, 771, 1341, 1770 |
| Tru1I | TTAA | 8 cut(s) | 275, 617, 879, 971, 1053, 1481, 1692, 1758 |
| Tru9I | TTAA | 8 cut(s) | 275, 617, 879, 971, 1053, 1481, 1692, 1758 |
| TscAI | CASTG | 6 cut(s) | 376, 394, 781, 966, 1414, 1813 |
| TseI | GCWGC | 9 cut(s) | 23, 341, 695, 884, 956, 1199, 1475, 1604, 1650 |
| TspDTI | ATGAA | 6 cut(s) | 228, 338, 573, 999, 1337, 1358 |
| TspRI | CASTG | 6 cut(s) | 376, 394, 781, 966, 1414, 1813 |
| VpaK11BI | GGWCC | 1 cut(s) | 1157 |
| XapI | RAATTY | 3 cut(s) | 249, 1325, 1398 |
| XbaI | TCTAGA | 1 cut(s) | 868 |
| XceI | RCATGY | 1 cut(s) | 1199 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 320 |
| XmnI | GAANNNNTTC | 1 cut(s) | 252 |
| XspI | CTAG | 5 cut(s) | 110, 437, 795, 869, 1870 |
| ZrmI | AGTACT | 1 cut(s) | 59 |
| Zsp2I | ATGCAT | 1 cut(s) | 1113 |