Prupe.8G192100_v2.0.a1

asparagine--tRNA ligase, cytoplasmic

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
18624651 .. 18627883
3233 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G192100.1

Sequence Viewer

Length: 1872 bp
ATGGAATCTGAACAAGCAATGGCAGCTACTGTCTCAACCCGATTGACCACTTTCAAGTACTCGAACCGGGTTCTCTTGAAAACCATATTGGAGAGAAGGGATGGTGGCCTAGAATTGGCTGGTGAGAGAGTTGTGGTTGGAGGGTGGGTGAAGTCCTCCAAGGAGGTCAGGAAAGAGCCTGTGCCCCTTATAGTTGGTGATCATAGGCCGAATGAACCTGAACCCAGATCAGATGTCAGCTGTACCGAAATTCTTCAGTCTCGGATACCATTTTTAAGAGCAATTGTGAAGATCTTGGGAGGAAGCGGCGGCCATTACCCTCTTGGCGAAAAGCTGGAGGCTGCGGTTCATAAGCCCCCTCCTCCTTCCACTGTCTTCTTGAAAGTCAGTGATGGTTCTTGTGTTGCAACTCTTCAGGTGGTTGTTGAATCCTCACTAGCTCCACCAAGCCAGCTCTTGCATACTGGAACTTGTATCATAGTGGAAGGTTTGCTCCAGCAGTCTTTGGTACATGGCACAAATGTTATCGAGCTGAGAGTGGATACAGTACATCATATTGGAACAGTAGATTACAGCAAGTATTCATTAGCGAAAAAACGTGTGCCGTTGGATAAGTTAAGGGATTTTTGCCACATTCGAGCTCGAACAACCACGGTGGCATCTGTTATGCGAATCCGCAATGCGCTGGATTTTGCAGCTCACACATTTTGTCAAAACCATGGTTTCCTTAGTGTGCAAGTACCGATTCTAACGACCACAGACTGTAAAGGATTCAGTGAAAAGTTCCAGGTTACTAGTCTTTTTGGCAAAGCAGGTGAAAAGGAGGAGCCTCATCATAAGGCCATTGCTGAACTTGAAGGTGTTAGTCTAGATGTTATTAAGGCTGCTGTGAAGGAGAAAAGTAACTTGGTAGAGGAACTCAAGAGGACTGATAGCAATAAGGAAGCATTGGATGCTGCAGTGCAGGATTTAAGGAAAGCAAATGAATTAGCATCACAGTTGGAAGCAAGAGAAAAAACAAAACCAAAAACTTCTCAAAAGGTTGACAATGTTAAATCTTCTGAGGATTTCTTCTCCAGCCCAACTTATCTAACCTGTTCTGGTCGAATGCATCTGGAGAGCTATGCTTGTGCCCTTGGAAATGTTTACTCCTTTGGTCCCAGATTTCAAGCAGATAAAGAGGAGTCCCCGAAACATGCTGCAGAGATGTGGATGTTTGAAGTTGAATTGGCATTTTCACAATTAGAGGATGCAATCAATTGTGCAGATGACTTTCTCAAGTTCCTCTGCAAATGGGTATTAGAAAACTGTCCTGAAGATATGAAATTTGTTTCTCAACGAATCGACAAAACCAGAGCTGATCGTCTTCATTCGGTGATTTCAAGTTCCTTTGAAAGAATTTCCTACACTGAAGCATTAGATGCTATAAAGAAGGTTACAGAGAAGAAAATTGATACAAAAATAGAGTGGGGTGCTGCATTAACAGAAGCAGATCTGAGTTATTTGGCTGATGAGATCTTCAAGAAGCCTGTAATCATATACAATTATCCAAAAGAAGCCAAGCCATTTTATGTAAGGCTGAATGATGATGGAAAGACAGTTGCAGCATTTGATATCGTTGTACCGAAGGCTGGAAAGTTGATTTCTGGCAGCCAAAATGAGGAGCGCATCACTATTCTAACTACAAGGGTTAAGGAATTAGGCTTAGCAAGAGAGCAGTACGAATGGTACTTGGATCTTCGCCGGCATGGAACTGTTAAGCACTCTGGATTCAGTCTTGAGTTTGATCTTATGGTTCTCTTTTCCACTGGCCTGACTGATGTAAGAGATGTTATCCCCTTCCCCAGAAGCTATGGCAAAGCCGACTACTAG

Protein Analysis

624

Amino Acids

69.66

Weight (kDa)

6.8

Isoelectric Point (pI)

41.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010957)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 803
Acc36I ACCTGC 1 cut(s) 803
AciI CCGC 4 cut(s) 306, 309, 344, 676
AclWI GGATC 1 cut(s) 1743
AcoI YGGCCR 1 cut(s) 310
AcsI RAATTY 3 cut(s) 249, 1325, 1398
AcuI CTGAAG 4 cut(s) 239, 398, 1335, 1431
AfaI GTAC 8 cut(s) 59, 244, 510, 549, 741, 1623, 1721, 1730
AfiI CCNNNNNNNGG 3 cut(s) 115, 1631, 1660
AflIII ACRYGT 1 cut(s) 598
AhlI ACTAGT 1 cut(s) 794
AjnI CCWGG 1 cut(s) 786
AjuI GAANNNNNNNTTGG 4 cut(s) 71, 103, 890, 922
Alw21I GWGCWC 1 cut(s) 643
Alw26I GTCTC 2 cut(s) 37, 264
AlwI GGATC 1 cut(s) 1743
AlwNI CAGNNNCTG 1 cut(s) 29
AoxI GGCC 5 cut(s) 106, 206, 310, 840, 1810
ApeKI GCWGC 9 cut(s) 23, 341, 695, 884, 956, 1199, 1475, 1604, 1650
ApoI RAATTY 3 cut(s) 249, 1325, 1398
Asp700I GAANNNNTTC 1 cut(s) 252
AspLEI GCGC 2 cut(s) 685, 1668
AspS9I GGNCC 1 cut(s) 1157
AsuC2I CCSGG 1 cut(s) 68
AsuHPI GGTGA 5 cut(s) 134, 160, 209, 827, 1387
AvaII GGWCC 1 cut(s) 1157
BaeGI GKGCMC 2 cut(s) 186, 1135
BanII GRGCYC 1 cut(s) 643
BbsI GAAGAC 2 cut(s) 367, 1358
Bbv12I GWGCWC 1 cut(s) 643
BbvI GCAGC 9 cut(s) 35, 328, 707, 871, 943, 1186, 1462, 1616, 1662
BccI CCATC 3 cut(s) 95, 386, 1583
BceAI ACGGC 1 cut(s) 589
BciT130I CCWGG 1 cut(s) 788
BciVI GTATCC 2 cut(s) 258, 535
BclI TGATCA 1 cut(s) 199
BcnI CCSGG 1 cut(s) 68
BcoDI GTCTC 2 cut(s) 37, 264
BcuI ACTAGT 1 cut(s) 794
BfaI CTAG 5 cut(s) 110, 437, 795, 869, 1870
BfmI CTRYAG 2 cut(s) 957, 1200
BfuAI ACCTGC 1 cut(s) 803
BfuI GTATCC 2 cut(s) 258, 535
BglII AGATCT 3 cut(s) 291, 1492, 1515
BlpI GCTNAGC 1 cut(s) 1705
BmcAI AGTACT 1 cut(s) 59
Bme1390I CCNGG 2 cut(s) 68, 788
Bme18I GGWCC 1 cut(s) 1157
BmgT120I GGNCC 1 cut(s) 1157
BmiI GGNNCC 2 cut(s) 828, 1159
BmrFI CCNGG 2 cut(s) 68, 788
BmsI GCATC 7 cut(s) 668, 943, 1001, 1120, 1240, 1411, 1677
BpiI GAAGAC 2 cut(s) 367, 1358
BpmI CTGGAG 4 cut(s) 356, 479, 1060, 1136
Bpu1102I GCTNAGC 1 cut(s) 1705
BpuEI CTTGAG 3 cut(s) 905, 1262, 1799
BpuMI CCSGG 1 cut(s) 68
BsaJI CCNNGG 4 cut(s) 159, 651, 718, 1135
BsaXI ACNNNNNCTCC 2 cut(s) 132, 162
Bsc4I CCNNNNNNNGG 3 cut(s) 115, 1631, 1660
Bse118I RCCGGY 1 cut(s) 1743
Bse1I ACTGG 2 cut(s) 469, 1813
Bse3DI GCAATG 3 cut(s) 24, 685, 843
BseBI CCWGG 1 cut(s) 788
BseDI CCNNGG 4 cut(s) 159, 651, 718, 1135
BseGI GGATG 4 cut(s) 106, 958, 1218, 1255
BseLI CCNNNNNNNGG 3 cut(s) 115, 1631, 1660
BseMI GCAATG 3 cut(s) 24, 685, 843
BseMII CTCAG 3 cut(s) 524, 1053, 1487
BseNI ACTGG 2 cut(s) 469, 1813
BseRI GAGGAG 4 cut(s) 351, 839, 1196, 1676
BseSI GKGCMC 2 cut(s) 186, 1135
BseXI GCAGC 9 cut(s) 35, 328, 707, 871, 943, 1186, 1462, 1616, 1662
BsgI GTGCAG 2 cut(s) 983, 1284
BshFI GGCC 5 cut(s) 108, 208, 312, 842, 1812
BsiHKAI GWGCWC 1 cut(s) 643
BsiSI CCGG 2 cut(s) 67, 1744
BslFI GGGAC 2 cut(s) 1143, 1171
BslI CCNNNNNNNGG 3 cut(s) 115, 1631, 1660
BsmAI GTCTC 2 cut(s) 37, 264
BsmFI GGGAC 2 cut(s) 1143, 1171
BsmI GAATGC 1 cut(s) 1113
BsnI GGCC 5 cut(s) 108, 208, 312, 842, 1812
Bsp1286I GDGCHC 3 cut(s) 186, 643, 1135
Bsp143I GATC 8 cut(s) 199, 227, 291, 1360, 1492, 1515, 1735, 1786
Bsp1720I GCTNAGC 1 cut(s) 1705
Bsp19I CCATGG 1 cut(s) 718
BspACI CCGC 4 cut(s) 306, 309, 344, 676
BspANI GGCC 5 cut(s) 108, 208, 312, 842, 1812
BspCNI CTCAG 3 cut(s) 525, 1054, 1488
BspLI GGNNCC 2 cut(s) 828, 1159
BspMAI CTGCAG 2 cut(s) 961, 1204
BspMI ACCTGC 1 cut(s) 803
BspPI GGATC 1 cut(s) 1743
BsrDI GCAATG 3 cut(s) 24, 685, 843
BsrFI RCCGGY 1 cut(s) 1743
BsrI ACTGG 2 cut(s) 469, 1813
BssAI RCCGGY 1 cut(s) 1743
BssECI CCNNGG 4 cut(s) 159, 651, 718, 1135
BssMI GATC 8 cut(s) 199, 227, 291, 1360, 1492, 1515, 1735, 1786
BssT1I CCWWGG 3 cut(s) 159, 718, 1135
Bst2UI CCWGG 1 cut(s) 788
Bst6I CTCTTC 1 cut(s) 417
BstAPI GCANNNNNTGC 2 cut(s) 953, 1421
BstC8I GCNNGC 2 cut(s) 452, 1745
BstDEI CTNAG 5 cut(s) 533, 728, 1062, 1496, 1705
BstDSI CCRYGG 2 cut(s) 651, 718
BstF5I GGATG 4 cut(s) 106, 958, 1218, 1255
BstHHI GCGC 2 cut(s) 685, 1668
BstKTI GATC 8 cut(s) 202, 230, 294, 1363, 1495, 1518, 1738, 1789
BstMAI GTCTC 2 cut(s) 37, 264
BstMBI GATC 8 cut(s) 199, 227, 291, 1360, 1492, 1515, 1735, 1786
BstMWI GCNNNNNNNGC 3 cut(s) 23, 953, 1421
BstNI CCWGG 1 cut(s) 788
BstNSI RCATGY 1 cut(s) 1199
BstSCI CCNGG 2 cut(s) 66, 786
BstSFI CTRYAG 2 cut(s) 957, 1200
BstSLI GKGCMC 2 cut(s) 186, 1135
BstV1I GCAGC 9 cut(s) 35, 328, 707, 871, 943, 1186, 1462, 1616, 1662
BstV2I GAAGAC 2 cut(s) 367, 1358
BstX2I RGATCY 4 cut(s) 291, 1492, 1515, 1735
BstYI RGATCY 4 cut(s) 291, 1492, 1515, 1735
BsuI GTATCC 2 cut(s) 258, 535
BsuRI GGCC 5 cut(s) 108, 208, 312, 842, 1812
BtgI CCRYGG 2 cut(s) 651, 718
BtsCI GGATG 4 cut(s) 106, 958, 1218, 1255
BtsI GCAGTG 1 cut(s) 966
BtsIMutI CAGTG 6 cut(s) 369, 394, 781, 966, 1407, 1806
BveI ACCTGC 1 cut(s) 803
Cac8I GCNNGC 2 cut(s) 452, 1745
CaiI CAGNNNCTG 1 cut(s) 29
CfoI GCGC 2 cut(s) 685, 1668
Cfr10I RCCGGY 1 cut(s) 1743
Cfr13I GGNCC 1 cut(s) 1157
Csp6I GTAC 8 cut(s) 58, 243, 509, 548, 740, 1622, 1720, 1729
CspCI CAANNNNNGTGG 2 cut(s) 636, 671
CviAII CATG 4 cut(s) 512, 719, 1196, 1748
CviQI GTAC 8 cut(s) 58, 243, 509, 548, 740, 1622, 1720, 1729
DdeI CTNAG 5 cut(s) 533, 728, 1062, 1496, 1705
DpnI GATC 8 cut(s) 201, 229, 293, 1362, 1494, 1517, 1737, 1788
DpnII GATC 8 cut(s) 199, 227, 291, 1360, 1492, 1515, 1735, 1786
EaeI YGGCCR 1 cut(s) 310
Eam1104I CTCTTC 1 cut(s) 417
EarI CTCTTC 1 cut(s) 417
Ecl136II GAGCTC 1 cut(s) 641
Eco130I CCWWGG 3 cut(s) 159, 718, 1135
Eco24I GRGCYC 1 cut(s) 643
Eco32I GATATC 1 cut(s) 1615
Eco47I GGWCC 1 cut(s) 1157
Eco53kI GAGCTC 1 cut(s) 641
Eco57I CTGAAG 4 cut(s) 239, 398, 1335, 1431
EcoICRI GAGCTC 1 cut(s) 641
EcoRII CCWGG 1 cut(s) 786
EcoRV GATATC 1 cut(s) 1615
EcoT14I CCWWGG 3 cut(s) 159, 718, 1135
EcoT22I ATGCAT 1 cut(s) 1113
EcoT38I GRGCYC 1 cut(s) 643
ErhI CCWWGG 3 cut(s) 159, 718, 1135
FaeI CATG 4 cut(s) 515, 722, 1199, 1751
FaqI GGGAC 2 cut(s) 1143, 1171
FatI CATG 4 cut(s) 511, 718, 1195, 1747
FbaI TGATCA 1 cut(s) 199
FokI GGATG 4 cut(s) 113, 965, 1225, 1262
FriOI GRGCYC 1 cut(s) 643
FspBI CTAG 5 cut(s) 110, 437, 795, 869, 1870
GlaI GCGC 2 cut(s) 684, 1667
GsuI CTGGAG 4 cut(s) 356, 479, 1060, 1136
HaeIII GGCC 5 cut(s) 108, 208, 312, 842, 1812
HapII CCGG 2 cut(s) 67, 1744
HhaI GCGC 2 cut(s) 685, 1668
Hin1II CATG 4 cut(s) 515, 722, 1199, 1751
Hin6I GCGC 2 cut(s) 683, 1666
HinP1I GCGC 2 cut(s) 683, 1666
HincII GTYRAC 1 cut(s) 1045
HindII GTYRAC 1 cut(s) 1045
HinfI GANTC 8 cut(s) 5, 428, 672, 745, 771, 1184, 1341, 1770
HpaII CCGG 2 cut(s) 67, 1744
HphI GGTGA 5 cut(s) 134, 160, 209, 827, 1387
Hpy166II GTNNAC 2 cut(s) 1045, 1147
Hpy188I TCNGA 5 cut(s) 10, 232, 264, 1063, 1497
Hpy8I GTNNAC 2 cut(s) 1045, 1147
HpyAV CCTTC 8 cut(s) 90, 375, 479, 851, 886, 1426, 1621, 1849
HpyCH4IV ACGT 1 cut(s) 598
HpyF10VI GCNNNNNNNGC 3 cut(s) 23, 953, 1421
HpyF3I CTNAG 5 cut(s) 533, 728, 1062, 1496, 1705
HpySE526I ACGT 1 cut(s) 598
Hsp92II CATG 4 cut(s) 515, 722, 1199, 1751
HspAI GCGC 2 cut(s) 683, 1666
KroI GCCGGC 1 cut(s) 1743
KroNI GCCGGC 1 cut(s) 1745
Ksp22I TGATCA 1 cut(s) 199
Kzo9I GATC 8 cut(s) 199, 227, 291, 1360, 1492, 1515, 1735, 1786
LmnI GCTCC 4 cut(s) 445, 498, 826, 1663
Lsp1109I GCAGC 9 cut(s) 35, 328, 707, 871, 943, 1186, 1462, 1616, 1662
LweI GCATC 7 cut(s) 668, 943, 1001, 1120, 1240, 1411, 1677
MaeI CTAG 5 cut(s) 110, 437, 795, 869, 1870
MaeII ACGT 1 cut(s) 598
MaeIII GTNAC 3 cut(s) 790, 902, 1435
MalI GATC 8 cut(s) 201, 229, 293, 1362, 1494, 1517, 1737, 1788
MboI GATC 8 cut(s) 199, 227, 291, 1360, 1492, 1515, 1735, 1786
MfeI CAATTG 2 cut(s) 282, 1258
MflI RGATCY 4 cut(s) 291, 1492, 1515, 1735
MhlI GDGCHC 3 cut(s) 186, 643, 1135
MlyI GAGTC 1 cut(s) 1193
MmeI TCCRAC 3 cut(s) 118, 588, 981
Mph1103I ATGCAT 1 cut(s) 1113
MroNI GCCGGC 1 cut(s) 1743
MroXI GAANNNNTTC 1 cut(s) 252
MseI TTAA 8 cut(s) 275, 617, 879, 971, 1053, 1481, 1692, 1758
MspA1I CMGCKG 1 cut(s) 240
MspI CCGG 2 cut(s) 67, 1744
MspR9I CCNGG 2 cut(s) 68, 788
MunI CAATTG 2 cut(s) 282, 1258
Mva1269I GAATGC 1 cut(s) 1113
MvaI CCWGG 1 cut(s) 788
MwoI GCNNNNNNNGC 3 cut(s) 23, 953, 1421
NaeI GCCGGC 1 cut(s) 1745
NciI CCSGG 1 cut(s) 68
NcoI CCATGG 1 cut(s) 718
NdeII GATC 8 cut(s) 199, 227, 291, 1360, 1492, 1515, 1735, 1786
NgoMIV GCCGGC 1 cut(s) 1743
NlaIII CATG 4 cut(s) 515, 722, 1199, 1751
NlaIV GGNNCC 2 cut(s) 828, 1159
NsiI ATGCAT 1 cut(s) 1113
NspI RCATGY 1 cut(s) 1199
PaqCI CACCTGC 1 cut(s) 803
PctI GAATGC 1 cut(s) 1113
PdiI GCCGGC 1 cut(s) 1745
PdmI GAANNNNTTC 1 cut(s) 252
PfeI GAWTC 7 cut(s) 5, 428, 672, 745, 771, 1341, 1770
PleI GAGTC 1 cut(s) 1192
PpsI GAGTC 1 cut(s) 1192
Psp124BI GAGCTC 1 cut(s) 643
Psp6I CCWGG 1 cut(s) 786
PspGI CCWGG 1 cut(s) 786
PspN4I GGNNCC 2 cut(s) 828, 1159
PspPI GGNCC 1 cut(s) 1157
PstI CTGCAG 2 cut(s) 961, 1204
PstNI CAGNNNCTG 1 cut(s) 29
PsuI RGATCY 4 cut(s) 291, 1492, 1515, 1735
PvuII CAGCTG 1 cut(s) 240
RsaI GTAC 8 cut(s) 59, 244, 510, 549, 741, 1623, 1721, 1730
RsaNI GTAC 8 cut(s) 58, 243, 509, 548, 740, 1622, 1720, 1729
SacI GAGCTC 1 cut(s) 643
SaqAI TTAA 8 cut(s) 275, 617, 879, 971, 1053, 1481, 1692, 1758
Sau3AI GATC 8 cut(s) 199, 227, 291, 1360, 1492, 1515, 1735, 1786
Sau96I GGNCC 1 cut(s) 1157
ScaI AGTACT 1 cut(s) 59
SchI GAGTC 1 cut(s) 1193
ScrFI CCNGG 2 cut(s) 68, 788
SduI GDGCHC 3 cut(s) 186, 643, 1135
SfaNI GCATC 7 cut(s) 668, 943, 1001, 1120, 1240, 1411, 1677
SfcI CTRYAG 2 cut(s) 957, 1200
SinI GGWCC 1 cut(s) 1157
SmlI CTYRAG 3 cut(s) 920, 1277, 1778
SmoI CTYRAG 3 cut(s) 920, 1277, 1778
SpeI ACTAGT 1 cut(s) 794
SsiI CCGC 4 cut(s) 306, 309, 344, 676
SspMI CTAG 5 cut(s) 110, 437, 795, 869, 1870
SstI GAGCTC 1 cut(s) 643
StyD4I CCNGG 2 cut(s) 66, 786
StyI CCWWGG 3 cut(s) 159, 718, 1135
TaiI ACGT 1 cut(s) 601
TaqI TCGA 6 cut(s) 62, 528, 637, 643, 1105, 1344
TatI WGTACW 2 cut(s) 57, 547
TauI GCSGC 2 cut(s) 309, 312
TfiI GAWTC 7 cut(s) 5, 428, 672, 745, 771, 1341, 1770
Tru1I TTAA 8 cut(s) 275, 617, 879, 971, 1053, 1481, 1692, 1758
Tru9I TTAA 8 cut(s) 275, 617, 879, 971, 1053, 1481, 1692, 1758
TscAI CASTG 6 cut(s) 376, 394, 781, 966, 1414, 1813
TseI GCWGC 9 cut(s) 23, 341, 695, 884, 956, 1199, 1475, 1604, 1650
TspDTI ATGAA 6 cut(s) 228, 338, 573, 999, 1337, 1358
TspRI CASTG 6 cut(s) 376, 394, 781, 966, 1414, 1813
VpaK11BI GGWCC 1 cut(s) 1157
XapI RAATTY 3 cut(s) 249, 1325, 1398
XbaI TCTAGA 1 cut(s) 868
XceI RCATGY 1 cut(s) 1199
XcmI CCANNNNNNNNNTGG 1 cut(s) 320
XmnI GAANNNNTTC 1 cut(s) 252
XspI CTAG 5 cut(s) 110, 437, 795, 869, 1870
ZrmI AGTACT 1 cut(s) 59
Zsp2I ATGCAT 1 cut(s) 1113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.