Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0010957

Physical Location & Seq

Genomic Coordinates Reverse (-)

22880294 .. 22883164

Gene Structure 2871 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000012837

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1881 bp

ATGGACTCTGGAAAAGCCATGGCCTCTACTCCTGCTACTACCCAATTGACCACTTTCAAGTACTCCAATCGGGTCCTCTTGAAAACCATCTTGGAACGCAGTGATGAAGGCCTGGAGCTGATTGGTCAGAGAGTTCTCATCGGAGGGTGGGTCAAGTCCTCCAAGGAGGTCATGAAACAAACTCCTCCGCCGCCGCCACCGGCAGCCTATCATGAGACGGCTCGAGAACCCGAGCGCAAATCAGACGTCAGCTGTGTCGAAATCCTTCAATCTCGGATACCATTTCTGAGAACCATTGTGAAGGTCTTGGGTGGAAGCAGCTCCTCCAGCAACACTCTTCGAGAAAGGCTCGATGCGGTGCTTAAGCCGGCGCCGCCCTCCACGGCATTCTTGAAAGTCAGTGATGGTTCTTGTCCTGCAACTCTTCAGGTAATTGTTGAATCGTCTATAGTCCCGCCGTGCCAGCTGTTGCATACCGGGACTTGCATCACGGTGGAAGGTGTGCTGCAGCAATCTTTAGTGCAAGGCAAACATGTTGTTGAGCTGAGAGTGGAGAAAGTACTTCATATTGGAACAGTTGATTACAGCAAGTATCCCTTGTCCAAAAAGAGAGTGCCAATTGAGAAGTTAAGGGAATGCTTCCACATTCGCGCTCGGACAACCACGGTGGGATCTGTTATGCGAATCAGAAGTGCCCTGACTTTTGGGGCTCATACATTTTGTCACAACCATGGTTTTATTTCTGTGCAAGTACCCATTATAACTACAACAGACTGCAACGGGTTCAGTGAAACGTACAAGGTCACTGGTCTTTTTGACAAGGCAGGTCAAACGGAGGAACCTAAAGCCATTGCTGAAATTGAAGGTGTTAGCCTTGAAGCTATTAAGGCTGCTGCAAAAGAGAAGAGTAGCTTAGTAGAGGAACTCAAGAGGACTGATAGCAATAAGGAAGCTCTGGCCGCTGCAGTACAGGATTTAAGGAAAACAAACGAATTGGCATCGCAATTGGAAGCAAGAGAAAAATCAAAACTGAAAACTTCTCAAAAGCTTGACAATGTTAAGTCTTCCGAAGGTTCCTCCTCCTCCTCCCAAACTTTTCTAACCGTTTCTGGACGCCTGCATCTGGAGAGCTATGCATGTTCCCTTGGCAATGTTTACTCCTTCGGTCCCAGATTTCGAGCAGATAAAGGAGAGTCCCCTAAACATGTCCCAGAAATGTTGATGTTTGAAATTGAAATGGCTTTTTCACAACTAGAGGACGTAATGAATTGTGCAGATGACATTTTCAAGTTCCTCTGCAAATGGGTGTTGGAAAATTGTCCGGAAGATATGAAATTTGTTACTGAAAGAATAGACAGGAACAGGATTGATCGTCTTCAATCAGTGATTTCAAGTTCATTTGAAAGAATTTCCTACGCTGAGGCATTAAATGTTTTAAACAAGGTTACGGATAAGAAAGTTGAAACAAAATTACAGTGGGGTGCTGCATTAACAGAAGAAGATTTAAGTCATTTGTCTGATGAGATCTACAAGAAGCCTGTAATTGTATACAATTATCCAAAAGAAGCCAAGCCATTCTATGTACGGCTGAATGATGATGGAAAAACAGTTGCCGCATTTGATATGGTTGTACCAAAGATCGGAAGGTTAATTTCTGGTAGCCAAAATGAGGAGCGCACCCAAATACTAAGTACAAGGATCAAGGATTTGGGGTTGCCAAGAGAGCAGTATGAATGGTACTTGGATCTTCGCAGGCATGGAACTGTCAAGCACTCTGGCTTCAGTCTTGAGTTTGATCTTATGGTTCTCTTTGCCACTGGCCTTACTGATGTAAGAGATGCTATCCCCTTTCCCAGAAGTTATGGCAAAGCAAACTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004812 GO:0004816 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006421 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0034641 GO:0034645 GO:0034660 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

tRNA-synt_2

Protein Analysis

627

Amino Acids

69.86

Weight (kDa)

8.44

Isoelectric Point (pI)

46.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_2	PF00152	364 - 619	4.5e-39	tRNA synthetases class II (D, K and N)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010957)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07420 AT3G07420
fragaria_vesca	FvH4_2g17960
malus_domestica	MD05G1163500.v1.1 MD10G1153300.v1.1
prunus_persica	Prupe.8G192100_v2.0.a1
pyrus_communis	pycom05g15290 pycom10g13220
rosa_chinensis	RchiOBHm_Chr6g0283201
rosa_laevigata	RLG00000012837
rosa_multiflora	Rmu_sc0006459.1_g000001 Rmu_sc0013038.1_g000019
rosa_roxburghii	Rroxscaffold_2G00106680 Rroxscaffold_7G00185650
rosa_rugosa	Rorug06G0152600
rosa_samantha	Rh6AG265000 Rh6BG267900 Rh6CG267100 Rh6DG260300
rosa_wichuraiana	Rw6G022970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	761
AatII	GACGTC	1 cut(s)	249
Acc36I	ACCTGC	1 cut(s)	815
AccB1I	GGYRCC	1 cut(s)	370
AccI	GTMKAC	1 cut(s)	1548
AccII	CGCG	1 cut(s)	651
AccIII	TCCGGA	1 cut(s)	1321
AciI	CCGC	8 cut(s)	188, 191, 194, 356, 374, 455, 960, 1614
AclWI	GGATC	3 cut(s)	679, 1706, 1752
AcoI	YGGCCR	1 cut(s)	957
AcsI	RAATTY	2 cut(s)	1334, 1407
AcuI	CTGAAG	2 cut(s)	410, 1765
AcyI	GRCGYC	3 cut(s)	246, 371, 1114
AfaI	GTAC	9 cut(s)	62, 561, 753, 797, 969, 1584, 1632, 1693, 1739
AfiI	CCNNNNNNNGG	3 cut(s)	1123, 1640, 1669
AflII	CTTAAG	1 cut(s)	362
AflIII	ACRYGT	2 cut(s)	532, 1204
AjnI	CCWGG	1 cut(s)	111
AjuI	GAANNNNNNNTTGG	2 cut(s)	74, 106
Alw26I	GTCTC	1 cut(s)	209
AlwI	GGATC	3 cut(s)	679, 1706, 1752
Ama87I	CYCGRG	2 cut(s)	222, 230
Aor13HI	TCCGGA	1 cut(s)	1321
AoxI	GGCC	4 cut(s)	21, 109, 957, 1819
ApeKI	GCWGC	8 cut(s)	203, 318, 505, 508, 890, 893, 962, 1484
ApoI	RAATTY	2 cut(s)	1334, 1407
ArsI	GACNNNNNNTTYG	2 cut(s)	231, 263
Asp700I	GAANNNNTTC	1 cut(s)	264
AspLEI	GCGC	4 cut(s)	237, 373, 653, 1677
AspS9I	GGNCC	2 cut(s)	73, 1166
AsuC2I	CCSGG	1 cut(s)	478
AvaI	CYCGRG	2 cut(s)	222, 230
AvaII	GGWCC	2 cut(s)	73, 1166
BaeGI	GKGCMC	1 cut(s)	697
BanI	GGYRCC	1 cut(s)	370
BanII	GRGCYC	1 cut(s)	712
BbsI	GAAGAC	2 cut(s)	1056, 1367
BbvCI	CCTCAGC	1 cut(s)	1419
BbvI	GCAGC	8 cut(s)	215, 330, 492, 520, 877, 880, 949, 1471
BccI	CCATC	3 cut(s)	95, 398, 1592
BceAI	ACGGC	4 cut(s)	234, 399, 442, 1601
BciT130I	CCWGG	1 cut(s)	113
BciVI	GTATCC	2 cut(s)	270, 603
BcnI	CCSGG	1 cut(s)	478
BcoDI	GTCTC	1 cut(s)	209
BfaI	CTAG	2 cut(s)	1253, 1879
BfmI	CTRYAG	3 cut(s)	447, 506, 963
BfoI	RGCGCY	1 cut(s)	374
BfrI	CTTAAG	1 cut(s)	362
BfuAI	ACCTGC	1 cut(s)	815
BfuI	GTATCC	2 cut(s)	270, 603
BglII	AGATCT	1 cut(s)	1524
BmcAI	AGTACT	2 cut(s)	62, 561
Bme1390I	CCNGG	2 cut(s)	113, 478
Bme18I	GGWCC	2 cut(s)	73, 1166
BmeT110I	CYCGRG	2 cut(s)	222, 230
BmgT120I	GGNCC	2 cut(s)	73, 1166
BmiI	GGNNCC	5 cut(s)	74, 372, 840, 1075, 1168
BmrFI	CCNGG	2 cut(s)	113, 478
BmsI	GCATC	5 cut(s)	343, 495, 1007, 1129, 1828
BpiI	GAAGAC	2 cut(s)	1056, 1367
BplI	GAGNNNNNCTC	2 cut(s)	333, 365
BpmI	CTGGAG	3 cut(s)	134, 310, 1145
Bpu10I	CCTNAGC	1 cut(s)	1419
BpuEI	CTTGAG	2 cut(s)	911, 1808
BpuMI	CCSGG	1 cut(s)	478
BsaHI	GRCGYC	3 cut(s)	246, 371, 1114
BsaJI	CCNNGG	6 cut(s)	18, 162, 381, 663, 730, 1144
BsaWI	WCCGGW	1 cut(s)	1321
BsaXI	ACNNNNNCTCC	2 cut(s)	135, 165
Bsc4I	CCNNNNNNNGG	3 cut(s)	1123, 1640, 1669
Bse118I	RCCGGY	2 cut(s)	199, 367
Bse1I	ACTGG	2 cut(s)	811, 1822
Bse3DI	GCAATG	2 cut(s)	849, 1156
BseAI	TCCGGA	1 cut(s)	1321
BseBI	CCWGG	1 cut(s)	113
BseDI	CCNNGG	6 cut(s)	18, 162, 381, 663, 730, 1144
BseLI	CCNNNNNNNGG	3 cut(s)	1123, 1640, 1669
BseMI	GCAATG	2 cut(s)	849, 1156
BseMII	CTCAG	3 cut(s)	278, 536, 1410
BseNI	ACTGG	2 cut(s)	811, 1822
BseRI	GAGGAG	6 cut(s)	174, 313, 1069, 1072, 1075, 1685
BseSI	GKGCMC	1 cut(s)	697
BseXI	GCAGC	8 cut(s)	215, 330, 492, 520, 877, 880, 949, 1471
BsgI	GTGCAG	1 cut(s)	1293
Bsh1236I	CGCG	1 cut(s)	651
BshFI	GGCC	4 cut(s)	23, 111, 959, 1821
BshNI	GGYRCC	1 cut(s)	370
BsiHKCI	CYCGRG	2 cut(s)	222, 230
BsiSI	CCGG	4 cut(s)	200, 368, 477, 1322
BslFI	GGGAC	5 cut(s)	437, 493, 1152, 1180, 1193
BslI	CCNNNNNNNGG	3 cut(s)	1123, 1640, 1669
BsmAI	GTCTC	1 cut(s)	209
BsmBI	CGTCTC	1 cut(s)	209
BsmFI	GGGAC	5 cut(s)	437, 493, 1152, 1180, 1193
BsmI	GAATGC	2 cut(s)	386, 641
BsnI	GGCC	4 cut(s)	23, 111, 959, 1821
BsoBI	CYCGRG	2 cut(s)	222, 230
Bsp1286I	GDGCHC	2 cut(s)	697, 712
Bsp13I	TCCGGA	1 cut(s)	1321
Bsp143I	GATC	7 cut(s)	671, 1369, 1524, 1638, 1698, 1744, 1795
Bsp19I	CCATGG	2 cut(s)	18, 730
BspACI	CCGC	8 cut(s)	188, 191, 194, 356, 374, 455, 960, 1614
BspANI	GGCC	4 cut(s)	23, 111, 959, 1821
BspCNI	CTCAG	3 cut(s)	279, 537, 1411
BspEI	TCCGGA	1 cut(s)	1321
BspFNI	CGCG	1 cut(s)	651
BspHI	TCATGA	2 cut(s)	171, 211
BspLI	GGNNCC	5 cut(s)	74, 372, 840, 1075, 1168
BspMAI	CTGCAG	2 cut(s)	510, 967
BspMI	ACCTGC	1 cut(s)	815
BspPI	GGATC	3 cut(s)	679, 1706, 1752
BspT107I	GGYRCC	1 cut(s)	370
BspTI	CTTAAG	1 cut(s)	362
BsrDI	GCAATG	2 cut(s)	849, 1156
BsrFI	RCCGGY	2 cut(s)	199, 367
BsrI	ACTGG	2 cut(s)	811, 1822
BssAI	RCCGGY	2 cut(s)	199, 367
BssECI	CCNNGG	6 cut(s)	18, 162, 381, 663, 730, 1144
BssMI	GATC	7 cut(s)	671, 1369, 1524, 1638, 1698, 1744, 1795
BssNAI	GTATAC	1 cut(s)	1549
BssNI	GRCGYC	3 cut(s)	246, 371, 1114
BssT1I	CCWWGG	4 cut(s)	18, 162, 730, 1144
Bst1107I	GTATAC	1 cut(s)	1549
Bst2UI	CCWGG	1 cut(s)	113
Bst4CI	ACNGT	7 cut(s)	493, 577, 667, 1105, 1476, 1609, 1765
Bst6I	CTCTTC	3 cut(s)	342, 429, 899
BstACI	GRCGYC	3 cut(s)	246, 371, 1114
BstAFI	CTTAAG	1 cut(s)	362
BstC8I	GCNNGC	4 cut(s)	369, 464, 1118, 1754
BstDEI	CTNAG	5 cut(s)	287, 545, 913, 1419, 1688
BstDSI	CCRYGG	4 cut(s)	18, 381, 663, 730
BstFNI	CGCG	1 cut(s)	651
BstH2I	RGCGCY	1 cut(s)	374
BstHHI	GCGC	4 cut(s)	237, 373, 653, 1677
BstKTI	GATC	7 cut(s)	674, 1372, 1527, 1641, 1701, 1747, 1798
BstMAI	GTCTC	1 cut(s)	209
BstMBI	GATC	7 cut(s)	671, 1369, 1524, 1638, 1698, 1744, 1795
BstMWI	GCNNNNNNNGC	6 cut(s)	327, 373, 463, 887, 959, 1723
BstNI	CCWGG	1 cut(s)	113
BstNSI	RCATGY	3 cut(s)	536, 1140, 1208
BstSCI	CCNGG	2 cut(s)	111, 476
BstSFI	CTRYAG	3 cut(s)	447, 506, 963
BstSLI	GKGCMC	1 cut(s)	697
BstUI	CGCG	1 cut(s)	651
BstV1I	GCAGC	8 cut(s)	215, 330, 492, 520, 877, 880, 949, 1471
BstV2I	GAAGAC	2 cut(s)	1056, 1367
BstX2I	RGATCY	3 cut(s)	671, 1524, 1744
BstYI	RGATCY	3 cut(s)	671, 1524, 1744
BstZ17I	GTATAC	1 cut(s)	1549
BsuI	GTATCC	2 cut(s)	270, 603
BsuRI	GGCC	4 cut(s)	23, 111, 959, 1821
BtgI	CCRYGG	4 cut(s)	18, 381, 663, 730
BtgZI	GCGATG	1 cut(s)	984
BtsI	GCAGTG	1 cut(s)	106
BtsIMutI	CAGTG	7 cut(s)	106, 406, 793, 804, 1389, 1481, 1815
BveI	ACCTGC	1 cut(s)	815
Cac8I	GCNNGC	4 cut(s)	369, 464, 1118, 1754
CciI	TCATGA	2 cut(s)	171, 211
CfoI	GCGC	4 cut(s)	237, 373, 653, 1677
Cfr10I	RCCGGY	2 cut(s)	199, 367
Cfr13I	GGNCC	2 cut(s)	73, 1166
CseI	GACGC	1 cut(s)	1122
Csp6I	GTAC	9 cut(s)	61, 560, 752, 796, 968, 1583, 1631, 1692, 1738
CspCI	CAANNNNNGTGG	2 cut(s)	648, 683
CviAII	CATG	8 cut(s)	19, 172, 212, 533, 731, 1137, 1205, 1757
CviQI	GTAC	9 cut(s)	61, 560, 752, 796, 968, 1583, 1631, 1692, 1738
DdeI	CTNAG	5 cut(s)	287, 545, 913, 1419, 1688
DinI	GGCGCC	1 cut(s)	372
DpnI	GATC	7 cut(s)	673, 1371, 1526, 1640, 1700, 1746, 1797
DpnII	GATC	7 cut(s)	671, 1369, 1524, 1638, 1698, 1744, 1795
DraI	TTTAAA	1 cut(s)	1437
EaeI	YGGCCR	1 cut(s)	957
Eam1104I	CTCTTC	3 cut(s)	342, 429, 899
EarI	CTCTTC	3 cut(s)	342, 429, 899
EciI	GGCGGA	1 cut(s)	177
Eco130I	CCWWGG	4 cut(s)	18, 162, 730, 1144
Eco147I	AGGCCT	1 cut(s)	111
Eco24I	GRGCYC	1 cut(s)	712
Eco47I	GGWCC	2 cut(s)	73, 1166
Eco57I	CTGAAG	2 cut(s)	410, 1765
Eco88I	CYCGRG	2 cut(s)	222, 230
EcoO109I	RGGNCCY	1 cut(s)	73
EcoRII	CCWGG	1 cut(s)	111
EcoT14I	CCWWGG	4 cut(s)	18, 162, 730, 1144
EcoT22I	ATGCAT	1 cut(s)	1138
EcoT38I	GRGCYC	1 cut(s)	712
EgeI	GGCGCC	1 cut(s)	372
EheI	GGCGCC	1 cut(s)	372
ErhI	CCWWGG	4 cut(s)	18, 162, 730, 1144
Esp3I	CGTCTC	1 cut(s)	209
FaeI	CATG	8 cut(s)	22, 175, 215, 536, 734, 1140, 1208, 1760
FalI	AAGNNNNNCTT	4 cut(s)	581, 613, 896, 928
FaqI	GGGAC	5 cut(s)	437, 493, 1152, 1180, 1193
FatI	CATG	8 cut(s)	18, 171, 211, 532, 730, 1136, 1204, 1756
FauI	CCCGC	1 cut(s)	462
FblI	GTMKAC	1 cut(s)	1548
FriOI	GRGCYC	1 cut(s)	712
FspBI	CTAG	2 cut(s)	1253, 1879
GlaI	GCGC	4 cut(s)	236, 372, 652, 1676
GsuI	CTGGAG	3 cut(s)	134, 310, 1145
HaeII	RGCGCY	1 cut(s)	374
HaeIII	GGCC	4 cut(s)	23, 111, 959, 1821
HapII	CCGG	4 cut(s)	200, 368, 477, 1322
HgaI	GACGC	1 cut(s)	1122
HhaI	GCGC	4 cut(s)	237, 373, 653, 1677
Hin1I	GRCGYC	3 cut(s)	246, 371, 1114
Hin1II	CATG	8 cut(s)	22, 175, 215, 536, 734, 1140, 1208, 1760
Hin6I	GCGC	4 cut(s)	235, 371, 651, 1675
HinP1I	GCGC	4 cut(s)	235, 371, 651, 1675
HindIII	AAGCTT	1 cut(s)	1046
HinfI	GANTC	4 cut(s)	5, 440, 684, 1193
HpaII	CCGG	4 cut(s)	200, 368, 477, 1322
Hpy166II	GTNNAC	2 cut(s)	1156, 1549
Hpy8I	GTNNAC	2 cut(s)	1156, 1549
HpyAV	CCTTC	8 cut(s)	101, 275, 295, 491, 857, 1064, 1171, 1638
HpyCH4III	ACNGT	7 cut(s)	493, 577, 667, 1105, 1476, 1609, 1765
HpyCH4IV	ACGT	3 cut(s)	246, 794, 1260
HpyF10VI	GCNNNNNNNGC	6 cut(s)	327, 373, 463, 887, 959, 1723
HpyF3I	CTNAG	5 cut(s)	287, 545, 913, 1419, 1688
HpySE526I	ACGT	3 cut(s)	246, 794, 1260
Hsp92I	GRCGYC	3 cut(s)	246, 371, 1114
Hsp92II	CATG	8 cut(s)	22, 175, 215, 536, 734, 1140, 1208, 1760
HspAI	GCGC	4 cut(s)	235, 371, 651, 1675
KasI	GGCGCC	1 cut(s)	370
Kpn2I	TCCGGA	1 cut(s)	1321
KroI	GCCGGC	1 cut(s)	367
KroNI	GCCGGC	1 cut(s)	369
Kzo9I	GATC	7 cut(s)	671, 1369, 1524, 1638, 1698, 1744, 1795
LmnI	GCTCC	3 cut(s)	115, 326, 1672
Lsp1109I	GCAGC	8 cut(s)	215, 330, 492, 520, 877, 880, 949, 1471
LweI	GCATC	5 cut(s)	343, 495, 1007, 1129, 1828
MaeI	CTAG	2 cut(s)	1253, 1879
MaeII	ACGT	3 cut(s)	246, 794, 1260
MaeIII	GTNAC	4 cut(s)	722, 802, 1339, 1444
MalI	GATC	7 cut(s)	673, 1371, 1526, 1640, 1700, 1746, 1797
MboI	GATC	7 cut(s)	671, 1369, 1524, 1638, 1698, 1744, 1795
MboII	GAAGA	9 cut(s)	329, 416, 916, 1056, 1337, 1367, 1508, 1511, 1739
MfeI	CAATTG	3 cut(s)	44, 618, 1004
MflI	RGATCY	3 cut(s)	671, 1524, 1744
MhlI	GDGCHC	2 cut(s)	697, 712
Mly113I	GGCGCC	1 cut(s)	371
MlyI	GAGTC	1 cut(s)	1202
MmeI	TCCRAC	1 cut(s)	1290
Mph1103I	ATGCAT	1 cut(s)	1138
MroI	TCCGGA	1 cut(s)	1321
MroNI	GCCGGC	1 cut(s)	367
MroXI	GAANNNNTTC	1 cut(s)	264
MslI	CAYNNNNRTG	2 cut(s)	491, 729
MspA1I	CMGCKG	3 cut(s)	252, 466, 962
MspCI	CTTAAG	1 cut(s)	362
MspI	CCGG	4 cut(s)	200, 368, 477, 1322
MspR9I	CCNGG	2 cut(s)	113, 478
MunI	CAATTG	3 cut(s)	44, 618, 1004
Mva1269I	GAATGC	2 cut(s)	386, 641
MvaI	CCWGG	1 cut(s)	113
MvnI	CGCG	1 cut(s)	651
MwoI	GCNNNNNNNGC	6 cut(s)	327, 373, 463, 887, 959, 1723
NaeI	GCCGGC	1 cut(s)	369
NarI	GGCGCC	1 cut(s)	371
NciI	CCSGG	1 cut(s)	478
NcoI	CCATGG	2 cut(s)	18, 730
NdeII	GATC	7 cut(s)	671, 1369, 1524, 1638, 1698, 1744, 1795
NgoMIV	GCCGGC	1 cut(s)	367
NlaIII	CATG	8 cut(s)	22, 175, 215, 536, 734, 1140, 1208, 1760
NlaIV	GGNNCC	5 cut(s)	74, 372, 840, 1075, 1168
NmuCI	GTSAC	2 cut(s)	722, 802
NsiI	ATGCAT	1 cut(s)	1138
NspI	RCATGY	3 cut(s)	536, 1140, 1208
PaeR7I	CTCGAG	1 cut(s)	222
PagI	TCATGA	2 cut(s)	171, 211
PceI	AGGCCT	1 cut(s)	111
PciI	ACATGT	2 cut(s)	532, 1204
PctI	GAATGC	2 cut(s)	386, 641
PdiI	GCCGGC	1 cut(s)	369
PdmI	GAANNNNTTC	1 cut(s)	264
PfeI	GAWTC	2 cut(s)	440, 684
PleI	GAGTC	1 cut(s)	1201
PluTI	GGCGCC	1 cut(s)	374
PpsI	GAGTC	1 cut(s)	1201
PpuMI	RGGWCCY	1 cut(s)	73
PscI	ACATGT	2 cut(s)	532, 1204
PsiI	TTATAA	1 cut(s)	761
Psp5II	RGGWCCY	1 cut(s)	73
Psp6I	CCWGG	1 cut(s)	111
PspGI	CCWGG	1 cut(s)	111
PspN4I	GGNNCC	5 cut(s)	74, 372, 840, 1075, 1168
PspPI	GGNCC	2 cut(s)	73, 1166
PspPPI	RGGWCCY	1 cut(s)	73
PstI	CTGCAG	2 cut(s)	510, 967
PsuI	RGATCY	3 cut(s)	671, 1524, 1744
PvuII	CAGCTG	2 cut(s)	252, 466
RsaI	GTAC	9 cut(s)	62, 561, 753, 797, 969, 1584, 1632, 1693, 1739
RsaNI	GTAC	9 cut(s)	61, 560, 752, 796, 968, 1583, 1631, 1692, 1738
RseI	CAYNNNNRTG	2 cut(s)	491, 729
Sau3AI	GATC	7 cut(s)	671, 1369, 1524, 1638, 1698, 1744, 1795
Sau96I	GGNCC	2 cut(s)	73, 1166
ScaI	AGTACT	2 cut(s)	62, 561
SchI	GAGTC	1 cut(s)	1202
ScrFI	CCNGG	2 cut(s)	113, 478
SduI	GDGCHC	2 cut(s)	697, 712
SfaNI	GCATC	5 cut(s)	343, 495, 1007, 1129, 1828
SfcI	CTRYAG	3 cut(s)	447, 506, 963
SfoI	GGCGCC	1 cut(s)	372
Sfr274I	CTCGAG	1 cut(s)	222
SinI	GGWCC	2 cut(s)	73, 1166
SlaI	CTCGAG	1 cut(s)	222
SmiMI	CAYNNNNRTG	2 cut(s)	491, 729
SmlI	CTYRAG	4 cut(s)	222, 362, 926, 1787
SmoI	CTYRAG	4 cut(s)	222, 362, 926, 1787
SseBI	AGGCCT	1 cut(s)	111
SsiI	CCGC	8 cut(s)	188, 191, 194, 356, 374, 455, 960, 1614
SspDI	GGCGCC	1 cut(s)	370
SspMI	CTAG	2 cut(s)	1253, 1879
StuI	AGGCCT	1 cut(s)	111
StyD4I	CCNGG	2 cut(s)	111, 476
StyI	CCWWGG	4 cut(s)	18, 162, 730, 1144
TaaI	ACNGT	7 cut(s)	493, 577, 667, 1105, 1476, 1609, 1765
TaiI	ACGT	3 cut(s)	249, 797, 1263
TaqI	TCGA	5 cut(s)	223, 258, 340, 351, 1177
TaqII	GACCGA	1 cut(s)	1154
TatI	WGTACW	4 cut(s)	60, 559, 967, 1691
TauI	GCSGC	5 cut(s)	193, 196, 376, 962, 1616
TfiI	GAWTC	2 cut(s)	440, 684
TscAI	CASTG	7 cut(s)	106, 406, 793, 811, 1389, 1481, 1822
TseFI	GTSAC	2 cut(s)	722, 802
TseI	GCWGC	8 cut(s)	203, 318, 505, 508, 890, 893, 962, 1484
Tsp45I	GTSAC	2 cut(s)	722, 802
TspDTI	ATGAA	7 cut(s)	120, 188, 554, 1280, 1346, 1386, 1746
TspGWI	ACGGA	2 cut(s)	848, 1463
TspRI	CASTG	7 cut(s)	106, 406, 793, 811, 1389, 1481, 1822
Vha464I	CTTAAG	1 cut(s)	362
VpaK11BI	GGWCC	2 cut(s)	73, 1166
XapI	RAATTY	2 cut(s)	1334, 1407
XceI	RCATGY	3 cut(s)	536, 1140, 1208
XhoI	CTCGAG	1 cut(s)	222
XmiI	GTMKAC	1 cut(s)	1548
XmnI	GAANNNNTTC	1 cut(s)	264
XspI	CTAG	2 cut(s)	1253, 1879
ZraI	GACGTC	1 cut(s)	247
ZrmI	AGTACT	2 cut(s)	62, 561
Zsp2I	ATGCAT	1 cut(s)	1138

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.