Prupe.8G196500_v2.0.a1

GTP cyclohydrolase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
18810297 .. 18813880
3584 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G196500.1

Sequence Viewer

Length: 1404 bp
ATGGGCGCTTTGGATGAGGGACATTTCTGCTCGGAACTTGAGAATGGAGTGAAATTGGGTTGCATCGAGCTGAGTTTTGAGGAAGAACCTGAAACCATAGCTATTGAAGATGCTGTGAAAGTTCTCATGCAGGGTCTGGGAGAGGATGTTAACAGAGAAGGTTTGAAGAAGACGCCTCTTCGCGTTGCCAAGGCCCTTCGGGAAGGAACAAGGGGTTACAGACAAAAGGCTAAGGACATTGTGCAAGGTGCTTTATTTCCTGAATCTGGTCTCGACAATACAGTTGGTCATGCTGGAGGAGCTGGTGGACTCGTGGTTGTTAGAGATCTTGACCTCTTCTCGTATTGTGAATCTTGTATGCTACCATTCCAGGTTAAATGTCATGTGGGTTATGTCCCTTCTGGTCAACGGGTTGTAGGCTTAAGCAAGCTCTCTCGAGTAGCTGATGTGTTTGCAAAACGCCTCCAAGAGCCTCAGCACCTAGCAGACGAAATGTGTTCAGCTTTGCAGCATGGCATCAAGCCAGCAGGTGTTGCAGTTGTACTCCAATGTTTACACATCCATTTCCCAAAAGTAGAATCAGCCTTTCTTGACTCGGACCACCAAGGATGGGTAGAGTTACTGGTTAGTTCAGGCTCAGGAGTTTTTGAGAATGAAAATGCCAATCTTTGGGCAGATTTTTTGAATCTTCTGAGATTCAGAGGCATAAATGTCGAGAAAAATCGCATGAGAGACTCAAGCGATCAACACTGGTGTCCATCTCGATTCCCCTCAGGTGCTATTGCTGCCTCCAAGATTGAATCAGTTAATCAGGGTATGGTCACTGCAGTAGCTTCAATTCTTAGGTCGTTAGGTGAAGACCCATTAAGGAAGGAGCTTGTAGGAACACCTGCTCGTTTCGTGAAGTGGTTGATGAACTTCCAAACTACTAATTTAGATATGAAGCTGAATGGCTTTGTTTCTGACAGGGTGGATCCTCTAAAGCTCAATGGAGATGGCTGCAAGGAAAAGAAAATCCACTCTGAGCTGAACTTGTCATTCTGGTCGCAGTGTGAGCATCATCTACTTCCCTTCTATGGTGTTGTGCATATAGGATATTTGTGCACTGAAGGATTCAATCCCATTGCGAAATCTCTTTTACAATCGATTGTATGTTTCTACGGTTACAAGCTCCAAGTACAAGAAAGACTCACCCGGCAGATAGCAGAGACTGCATCATCACTGTTAGGTGGAGATGTGATTGTGGTTGTGGAGGCTAATCACACTTGTATGATCTCGAGAGGCATCGAGAAGTTTGGAAGTAGTACAGCGACAATTGCTGTACTGGGTCGATTTTCGACTGACCCTGCTGCAAGGGCTAAGTTTTTGCAGAGCATTCCAAACACTGCCGTTTCAGGACGATGA

Protein Analysis

468

Amino Acids

51.17

Weight (kDa)

6.41

Isoelectric Point (pI)

38.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011449)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 518, 898
Acc36I ACCTGC 2 cut(s) 518, 898
AccB7I CCANNNNNTGG 1 cut(s) 669
AccII CGCG 1 cut(s) 183
AclWI GGATC 2 cut(s) 968, 981
AcuI CTGAAG 1 cut(s) 1128
AcyI GRCGYC 1 cut(s) 173
AfaI GTAC 4 cut(s) 543, 1179, 1306, 1323
AfiI CCNNNNNNNGG 4 cut(s) 266, 610, 669, 1076
AflII CTTAAG 1 cut(s) 421
AgsI TTSAA 6 cut(s) 107, 166, 685, 800, 837, 1117
AjnI CCWGG 1 cut(s) 369
Alw21I GWGCWC 1 cut(s) 1106
Alw26I GTCTC 3 cut(s) 275, 726, 1202
Alw44I GTGCAC 1 cut(s) 1102
AlwI GGATC 2 cut(s) 968, 981
AlwNI CAGNNNCTG 2 cut(s) 136, 1211
Ama87I CYCGRG 2 cut(s) 435, 1276
AoxI GGCC 1 cut(s) 192
ApaLI GTGCAC 1 cut(s) 1102
ApeKI GCWGC 4 cut(s) 508, 785, 999, 1349
AspLEI GCGC 1 cut(s) 8
AspS9I GGNCC 2 cut(s) 193, 598
AsuC2I CCSGG 1 cut(s) 1195
AsuHPI GGTGA 2 cut(s) 866, 1183
AvaI CYCGRG 2 cut(s) 435, 1276
AvaII GGWCC 1 cut(s) 598
AxyI CCTNAGG 1 cut(s) 772
BaeGI GKGCMC 1 cut(s) 1106
BamHI GGATCC 1 cut(s) 973
BauI CACGAG 1 cut(s) 311
BbsI GAAGAC 2 cut(s) 176, 864
Bbv12I GWGCWC 1 cut(s) 1106
BbvCI CCTCAGC 1 cut(s) 474
BbvI GCAGC 4 cut(s) 520, 772, 986, 1336
BccI CCATC 3 cut(s) 603, 766, 989
BceAI ACGGC 1 cut(s) 1373
BcgI CGANNNNNNTGC 2 cut(s) 694, 728
BciT130I CCWGG 1 cut(s) 371
BcnI CCSGG 1 cut(s) 1195
BcoDI GTCTC 3 cut(s) 275, 726, 1202
BfaI CTAG 1 cut(s) 482
BfmI CTRYAG 1 cut(s) 825
BfoI RGCGCY 1 cut(s) 9
BfrI CTTAAG 1 cut(s) 421
BfuAI ACCTGC 2 cut(s) 518, 898
BglII AGATCT 1 cut(s) 325
BisI GCNGC 4 cut(s) 509, 786, 1000, 1350
BlsI GCNGC 4 cut(s) 510, 787, 1001, 1351
Bme1390I CCNGG 2 cut(s) 371, 1195
Bme18I GGWCC 1 cut(s) 598
BmeT110I CYCGRG 2 cut(s) 435, 1276
BmgT120I GGNCC 2 cut(s) 193, 598
BmiI GGNNCC 1 cut(s) 975
BmrFI CCNGG 2 cut(s) 371, 1195
BmrI ACTGGG 1 cut(s) 1334
BmsI GCATC 6 cut(s) 72, 100, 525, 1066, 1223, 1293
BmuI ACTGGG 1 cut(s) 1334
BpiI GAAGAC 2 cut(s) 176, 864
BpmI CTGGAG 1 cut(s) 315
Bpu10I CCTNAGC 3 cut(s) 231, 474, 637
BpuEI CTTGAG 2 cut(s) 59, 721
BpuMI CCSGG 1 cut(s) 1195
Bsa29I ATCGAT 1 cut(s) 1145
BsaHI GRCGYC 1 cut(s) 173
BsaI GGTCTC 1 cut(s) 275
BsaJI CCNNGG 2 cut(s) 189, 604
BsaXI ACNNNNNCTCC 2 cut(s) 132, 162
Bsc4I CCNNNNNNNGG 4 cut(s) 266, 610, 669, 1076
Bse1I ACTGG 3 cut(s) 627, 755, 1329
Bse21I CCTNAGG 1 cut(s) 772
Bse3DI GCAATG 1 cut(s) 1122
BseBI CCWGG 1 cut(s) 371
BseCI ATCGAT 1 cut(s) 1145
BseDI CCNNGG 2 cut(s) 189, 604
BseGI GGATG 4 cut(s) 19, 151, 558, 614
BseLI CCNNNNNNNGG 4 cut(s) 266, 610, 669, 1076
BseMI GCAATG 1 cut(s) 1122
BseMII CTCAG 6 cut(s) 62, 488, 651, 683, 786, 1014
BseNI ACTGG 3 cut(s) 627, 755, 1329
BseRI GAGGAG 1 cut(s) 312
BseSI GKGCMC 1 cut(s) 1106
BseXI GCAGC 4 cut(s) 520, 772, 986, 1336
Bsh1236I CGCG 1 cut(s) 183
BshFI GGCC 1 cut(s) 194
BshVI ATCGAT 1 cut(s) 1145
BsiHKAI GWGCWC 1 cut(s) 1106
BsiHKCI CYCGRG 2 cut(s) 435, 1276
BsiSI CCGG 1 cut(s) 1195
BslFI GGGAC 2 cut(s) 33, 380
BslI CCNNNNNNNGG 4 cut(s) 266, 610, 669, 1076
BsmAI GTCTC 3 cut(s) 275, 726, 1202
BsmFI GGGAC 2 cut(s) 33, 380
BsmI GAATGC 1 cut(s) 1374
BsnI GGCC 1 cut(s) 194
Bso31I GGTCTC 1 cut(s) 275
BsoBI CYCGRG 2 cut(s) 435, 1276
Bsp1286I GDGCHC 1 cut(s) 1106
Bsp143I GATC 4 cut(s) 325, 742, 973, 1272
BspANI GGCC 1 cut(s) 194
BspCNI CTCAG 6 cut(s) 63, 487, 650, 684, 785, 1015
BspDI ATCGAT 1 cut(s) 1145
BspFNI CGCG 1 cut(s) 183
BspLI GGNNCC 1 cut(s) 975
BspMAI CTGCAG 1 cut(s) 829
BspMI ACCTGC 2 cut(s) 518, 898
BspPI GGATC 2 cut(s) 968, 981
BspTI CTTAAG 1 cut(s) 421
BspTNI GGTCTC 1 cut(s) 275
BsrDI GCAATG 1 cut(s) 1122
BsrI ACTGG 3 cut(s) 627, 755, 1329
BssECI CCNNGG 2 cut(s) 189, 604
BssMI GATC 4 cut(s) 325, 742, 973, 1272
BssNI GRCGYC 1 cut(s) 173
BssSI CACGAG 1 cut(s) 311
BssT1I CCWWGG 2 cut(s) 189, 604
Bst2BI CACGAG 1 cut(s) 311
Bst2UI CCWGG 1 cut(s) 371
Bst4CI ACNGT 3 cut(s) 283, 1163, 1224
Bst6I CTCTTC 2 cut(s) 183, 341
BstACI GRCGYC 1 cut(s) 173
BstAFI CTTAAG 1 cut(s) 421
BstAPI GCANNNNNTGC 2 cut(s) 533, 1211
BstC8I GCNNGC 2 cut(s) 428, 525
BstDEI CTNAG 9 cut(s) 71, 231, 474, 637, 692, 772, 842, 1023, 1359
BstF5I GGATG 4 cut(s) 19, 151, 558, 614
BstFNI CGCG 1 cut(s) 183
BstH2I RGCGCY 1 cut(s) 9
BstHHI GCGC 1 cut(s) 8
BstKTI GATC 4 cut(s) 328, 745, 976, 1275
BstMAI GTCTC 3 cut(s) 275, 726, 1202
BstMBI GATC 4 cut(s) 325, 742, 973, 1272
BstMWI GCNNNNNNNGC 7 cut(s) 299, 533, 785, 1054, 1211, 1316, 1355
BstNI CCWGG 1 cut(s) 371
BstSCI CCNGG 2 cut(s) 369, 1193
BstSFI CTRYAG 1 cut(s) 825
BstSLI GKGCMC 1 cut(s) 1106
BstUI CGCG 1 cut(s) 183
BstV1I GCAGC 4 cut(s) 520, 772, 986, 1336
BstV2I GAAGAC 2 cut(s) 176, 864
BstX2I RGATCY 2 cut(s) 325, 973
BstYI RGATCY 2 cut(s) 325, 973
Bsu15I ATCGAT 1 cut(s) 1145
Bsu36I CCTNAGG 1 cut(s) 772
BsuRI GGCC 1 cut(s) 194
BsuTUI ATCGAT 1 cut(s) 1145
BtsCI GGATG 4 cut(s) 19, 151, 558, 614
BtsI GCAGTG 3 cut(s) 822, 1055, 1383
BtsIMutI CAGTG 6 cut(s) 748, 822, 1055, 1104, 1220, 1383
BveI ACCTGC 2 cut(s) 518, 898
Cac8I GCNNGC 2 cut(s) 428, 525
CaiI CAGNNNCTG 2 cut(s) 136, 1211
CfoI GCGC 1 cut(s) 8
Cfr13I GGNCC 2 cut(s) 193, 598
ClaI ATCGAT 1 cut(s) 1145
CseI GACGC 1 cut(s) 181
Csp6I GTAC 4 cut(s) 542, 1178, 1305, 1322
CviAII CATG 5 cut(s) 127, 290, 383, 512, 727
CviQI GTAC 4 cut(s) 542, 1178, 1305, 1322
DdeI CTNAG 9 cut(s) 71, 231, 474, 637, 692, 772, 842, 1023, 1359
DpnI GATC 4 cut(s) 327, 744, 975, 1274
DpnII GATC 4 cut(s) 325, 742, 973, 1272
Eam1104I CTCTTC 2 cut(s) 183, 341
EarI CTCTTC 2 cut(s) 183, 341
Eco130I CCWWGG 2 cut(s) 189, 604
Eco31I GGTCTC 1 cut(s) 275
Eco47I GGWCC 1 cut(s) 598
Eco57I CTGAAG 1 cut(s) 1128
Eco81I CCTNAGG 1 cut(s) 772
Eco88I CYCGRG 2 cut(s) 435, 1276
EcoO109I RGGNCCY 1 cut(s) 193
EcoRII CCWGG 1 cut(s) 369
EcoT14I CCWWGG 2 cut(s) 189, 604
ErhI CCWWGG 2 cut(s) 189, 604
FaeI CATG 5 cut(s) 130, 293, 386, 515, 730
FaqI GGGAC 2 cut(s) 33, 380
FatI CATG 5 cut(s) 126, 289, 382, 511, 726
Fnu4HI GCNGC 4 cut(s) 509, 786, 1000, 1350
FokI GGATG 4 cut(s) 26, 158, 545, 621
Fsp4HI GCNGC 4 cut(s) 509, 786, 1000, 1350
FspBI CTAG 1 cut(s) 482
GlaI GCGC 1 cut(s) 7
GluI GCNGC 4 cut(s) 509, 786, 1000, 1350
GsuI CTGGAG 1 cut(s) 315
HaeII RGCGCY 1 cut(s) 9
HaeIII GGCC 1 cut(s) 194
HapII CCGG 1 cut(s) 1195
HgaI GACGC 1 cut(s) 181
HhaI GCGC 1 cut(s) 8
Hin1I GRCGYC 1 cut(s) 173
Hin1II CATG 5 cut(s) 130, 293, 386, 515, 730
Hin6I GCGC 1 cut(s) 6
HinP1I GCGC 1 cut(s) 6
HincII GTYRAC 2 cut(s) 151, 407
HindII GTYRAC 2 cut(s) 151, 407
HpaI GTTAAC 1 cut(s) 151
HpaII CCGG 1 cut(s) 1195
HphI GGTGA 2 cut(s) 866, 1183
Hpy166II GTNNAC 5 cut(s) 151, 308, 407, 554, 1104
Hpy188I TCNGA 6 cut(s) 34, 598, 693, 701, 964, 1024
Hpy8I GTNNAC 5 cut(s) 151, 308, 407, 554, 1104
HpyAV CCTTC 7 cut(s) 152, 197, 206, 408, 865, 1081, 1103
HpyCH4III ACNGT 3 cut(s) 283, 1163, 1224
HpyF10VI GCNNNNNNNGC 7 cut(s) 299, 533, 785, 1054, 1211, 1316, 1355
HpyF3I CTNAG 9 cut(s) 71, 231, 474, 637, 692, 772, 842, 1023, 1359
Hsp92I GRCGYC 1 cut(s) 173
Hsp92II CATG 5 cut(s) 130, 293, 386, 515, 730
HspAI GCGC 1 cut(s) 6
KspAI GTTAAC 1 cut(s) 151
Kzo9I GATC 4 cut(s) 325, 742, 973, 1272
LmnI GCTCC 3 cut(s) 299, 874, 1176
Lsp1109I GCAGC 4 cut(s) 520, 772, 986, 1336
LweI GCATC 6 cut(s) 72, 100, 525, 1066, 1223, 1293
MaeI CTAG 1 cut(s) 482
MaeIII GTNAC 4 cut(s) 215, 618, 820, 1163
MalI GATC 4 cut(s) 327, 744, 975, 1274
MboI GATC 4 cut(s) 325, 742, 973, 1272
MboII GAAGA 8 cut(s) 95, 119, 170, 178, 181, 328, 680, 869
MfeI CAATTG 1 cut(s) 1314
MflI RGATCY 2 cut(s) 325, 973
MhlI GDGCHC 1 cut(s) 1106
MluCI AATT 4 cut(s) 53, 837, 931, 1314
MlyI GAGTC 4 cut(s) 303, 587, 728, 1182
MseI TTAA 5 cut(s) 150, 375, 422, 807, 866
MslI CAYNNNNRTG 1 cut(s) 1268
MspCI CTTAAG 1 cut(s) 421
MspI CCGG 1 cut(s) 1195
MspR9I CCNGG 2 cut(s) 371, 1195
MunI CAATTG 1 cut(s) 1314
Mva1269I GAATGC 1 cut(s) 1374
MvaI CCWGG 1 cut(s) 371
MvnI CGCG 1 cut(s) 183
MwoI GCNNNNNNNGC 7 cut(s) 299, 533, 785, 1054, 1211, 1316, 1355
NciI CCSGG 1 cut(s) 1195
NdeII GATC 4 cut(s) 325, 742, 973, 1272
NlaIII CATG 5 cut(s) 130, 293, 386, 515, 730
NlaIV GGNNCC 1 cut(s) 975
NmuCI GTSAC 1 cut(s) 820
PaeR7I CTCGAG 2 cut(s) 435, 1276
PaqCI CACCTGC 2 cut(s) 518, 898
PctI GAATGC 1 cut(s) 1374
PfeI GAWTC 8 cut(s) 263, 350, 578, 685, 696, 765, 800, 1113
PflMI CCANNNNNTGG 1 cut(s) 669
PkrI GCNGC 4 cut(s) 510, 787, 1001, 1351
PleI GAGTC 4 cut(s) 303, 587, 728, 1182
PpsI GAGTC 4 cut(s) 303, 587, 728, 1182
Psp6I CCWGG 1 cut(s) 369
PspGI CCWGG 1 cut(s) 369
PspN4I GGNNCC 1 cut(s) 975
PspPI GGNCC 2 cut(s) 193, 598
PstI CTGCAG 1 cut(s) 829
PstNI CAGNNNCTG 2 cut(s) 136, 1211
PsuI RGATCY 2 cut(s) 325, 973
RsaI GTAC 4 cut(s) 543, 1179, 1306, 1323
RsaNI GTAC 4 cut(s) 542, 1178, 1305, 1322
RseI CAYNNNNRTG 1 cut(s) 1268
SaqAI TTAA 5 cut(s) 150, 375, 422, 807, 866
SatI GCNGC 4 cut(s) 509, 786, 1000, 1350
Sau3AI GATC 4 cut(s) 325, 742, 973, 1272
Sau96I GGNCC 2 cut(s) 193, 598
SchI GAGTC 4 cut(s) 303, 587, 728, 1182
ScrFI CCNGG 2 cut(s) 371, 1195
SduI GDGCHC 1 cut(s) 1106
SfaNI GCATC 6 cut(s) 72, 100, 525, 1066, 1223, 1293
SfcI CTRYAG 1 cut(s) 825
Sfr274I CTCGAG 2 cut(s) 435, 1276
SinI GGWCC 1 cut(s) 598
SlaI CTCGAG 2 cut(s) 435, 1276
SmiMI CAYNNNNRTG 1 cut(s) 1268
SmlI CTYRAG 5 cut(s) 38, 421, 435, 736, 1276
SmoI CTYRAG 5 cut(s) 38, 421, 435, 736, 1276
Sse9I AATT 4 cut(s) 53, 837, 931, 1314
SspMI CTAG 1 cut(s) 482
StyD4I CCNGG 2 cut(s) 369, 1193
StyI CCWWGG 2 cut(s) 189, 604
TaaI ACNGT 3 cut(s) 283, 1163, 1224
TasI AATT 4 cut(s) 53, 837, 931, 1314
TatI WGTACW 4 cut(s) 541, 1177, 1304, 1321
TfiI GAWTC 8 cut(s) 263, 350, 578, 685, 696, 765, 800, 1113
Tru1I TTAA 5 cut(s) 150, 375, 422, 807, 866
Tru9I TTAA 5 cut(s) 150, 375, 422, 807, 866
TscAI CASTG 6 cut(s) 755, 829, 1055, 1111, 1227, 1390
TseFI GTSAC 1 cut(s) 820
TseI GCWGC 4 cut(s) 508, 785, 999, 1349
Tsp45I GTSAC 1 cut(s) 820
TspDTI ATGAA 3 cut(s) 669, 929, 956
TspRI CASTG 6 cut(s) 755, 829, 1055, 1111, 1227, 1390
Van91I CCANNNNNTGG 1 cut(s) 669
Vha464I CTTAAG 1 cut(s) 421
VneI GTGCAC 1 cut(s) 1102
VpaK11BI GGWCC 1 cut(s) 598
XhoI CTCGAG 2 cut(s) 435, 1276
XspI CTAG 1 cut(s) 482
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.