pycom05g15690

GTP cyclohydrolase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
Physical Location & Seq
Reverse (-)
19189654 .. 19192170
2517 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g15690.1

Sequence Viewer

Length: 1437 bp
ATGGGCGCTTTGGATGAGGGGCATTTCTGCTCGGAGCTTGAGAATGGAGTGAAGCTGGGTTGCATTGAGCTGAGTTTCGAGGAAGAACCCGAAACCATAGCTATTGAGGATGCTGTCAAAGTTCTCATGCAGGGCTTGGGGGAGGATGTTAACAGAGAAGGCTTGAAGAAGACGCCTTTTCGGGTTGCGAAGGCCCTCAGAGAAGGAACAAGGGGTTACAGACAAAAGGTTAAGGACATTGTGCAAGGTGCTTTATTTCCTGAAGCTGGTCTGGACAATGCAGTTGGTCATGCTGGCGGAGCTGGTGGACTTGTAGTCGTTCGAGATCTTGACCTCTTCTCATATTGTGAATCTTGTATGCTGCCGTTCCAGGTTAAATGTCATGTGGGTTATGTCCCTTCTGGTCAACGGGTAGTAGGCTTAAGCAAGCTCTCTCGAGTAGCTGATGTGTTCGCAAAACGTCTCCAAGATCCCCAACGTCTAGCGAATGAAGTGTGTTCAGCGTTGCAGCATGGAATCAAACCAGCAGGTGTTGCAGTCGTACTCCAATGTTTGCACGTCCATTTCCCAAATCTGGAATCAGTTTTTCTTGACTCGAACCACCAAGGATGGGTAGAGTTACTGGTCAGCGCAGGTTCAGGAGTCTTTGAAAATAAAAATGCCAATATTTGGGCTGATTTTTGGAGTCTGCTGAGATTCAGAGGCATAAATGTGGAGAAAACTCGTGTGAGAGACAAACAAAATCACCATTGGTGTCCATCTCGATCTTCTGCTGGTGCAATTGCTACCTTCAAGATGGAATCTGTCAATCCGGGAATGGTGACTGCGGTAGCTTCAATTCTTAGGTCACTGGGTGAAGACCCATTAAGGAAGGAGCTTGTAGGAACACCTGCTCGTTTTGTGAAGTGGTTGATGAACTTCCAAAATAGTAACTTCGATATGAAGCTGAATGGCTTTGTTTCTGACAATGGAGATAACTTCAAGGAAAAGCACATCCATTCCGAGCTGAACTTGTCATTCTGGTCTCAGTGTGAGCATCATCTACTTCCTTTCTACGGTGTTGTGCATATAGGATATATGTGCACCGAAGGATCCAATCCCATTGGAAAATCTCTTTTGCAATCGATTGTGTGTTTTTACGGTTTTAAGCTCCAAGTACAAGAAAGACTCACACGACAGATAGCAGAGACGATATCACCACTGTTAGGTGGAGATGTGATTGTGGTTGTGGAGGCTAGCCACACCTGTATGATTTCTAGAGGAATCGAGAAGTTTGGAAGCAGTACAGCAACAATTGCTGTACTGGGTCGATTTTCAACTGACCCTGCTGCAAGAGCCAAGTTTATGCAGAGCATTCCAAACACCGCCGTTTCAGGTAGGACGATCGATCCTAGTTCATCAACAAATTTTATTAAGATATCTATTTTTCTCACGTGA

Protein Analysis

479

Amino Acids

52.5

Weight (kDa)

7.22

Isoelectric Point (pI)

39.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GTP_cyclohydroI PF01227 35 - 187 2.2e-35 GTP cyclohydrolase I
GTP_cyclohydroI PF01227 275 - 452 5.1e-40 GTP cyclohydrolase I
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011449)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 518, 898
Acc36I ACCTGC 3 cut(s) 518, 623, 898
AccB7I CCANNNNNTGG 1 cut(s) 669
AciI CCGC 3 cut(s) 297, 827, 1365
AclWI GGATC 4 cut(s) 464, 1086, 1099, 1382
AcsI RAATTY 1 cut(s) 1405
AcuI CTGAAG 1 cut(s) 282
AcvI CACGTG 1 cut(s) 1434
AcyI GRCGYC 1 cut(s) 173
AdeI CACNNNGTG 1 cut(s) 854
AfaI GTAC 4 cut(s) 543, 1158, 1285, 1302
AfiI CCNNNNNNNGG 6 cut(s) 266, 574, 610, 669, 1055, 1205
AflII CTTAAG 1 cut(s) 421
AgsI TTSAA 6 cut(s) 166, 650, 793, 837, 982, 1317
AhdI GACNNNNNGTC 1 cut(s) 314
AjiI CACGTC 1 cut(s) 559
AjnI CCWGG 1 cut(s) 369
Alw21I GWGCWC 1 cut(s) 1085
Alw26I GTCTC 4 cut(s) 467, 726, 1029, 1181
Alw44I GTGCAC 1 cut(s) 1081
AlwI GGATC 4 cut(s) 464, 1086, 1099, 1382
Ama87I CYCGRG 1 cut(s) 435
AoxI GGCC 1 cut(s) 192
ApaLI GTGCAC 1 cut(s) 1081
ApeKI GCWGC 3 cut(s) 361, 508, 1328
ApoI RAATTY 1 cut(s) 1405
AspLEI GCGC 2 cut(s) 8, 632
AspS9I GGNCC 1 cut(s) 193
AsuC2I CCSGG 1 cut(s) 813
AsuHPI GGTGA 4 cut(s) 737, 832, 866, 1188
AsuNHI GCTAGC 1 cut(s) 1235
AvaI CYCGRG 1 cut(s) 435
BaeGI GKGCMC 1 cut(s) 1085
BamHI GGATCC 1 cut(s) 1091
BauI CACGAG 1 cut(s) 723
BbrPI CACGTG 1 cut(s) 1434
BbsI GAAGAC 2 cut(s) 176, 864
Bbv12I GWGCWC 1 cut(s) 1085
BbvI GCAGC 3 cut(s) 348, 520, 1315
BccI CCATC 3 cut(s) 603, 766, 790
BceAI ACGGC 2 cut(s) 349, 1352
BciT130I CCWGG 1 cut(s) 371
BcnI CCSGG 1 cut(s) 813
BcoDI GTCTC 4 cut(s) 467, 726, 1029, 1181
BfaI CTAG 4 cut(s) 482, 1236, 1257, 1392
BfoI RGCGCY 1 cut(s) 9
BfrI CTTAAG 1 cut(s) 421
BfuAI ACCTGC 3 cut(s) 518, 623, 898
BglII AGATCT 1 cut(s) 325
BisI GCNGC 3 cut(s) 362, 509, 1329
BlsI GCNGC 3 cut(s) 363, 510, 1330
Bme1390I CCNGG 2 cut(s) 371, 813
BmeRI GACNNNNNGTC 1 cut(s) 314
BmeT110I CYCGRG 1 cut(s) 435
BmgBI CACGTC 1 cut(s) 559
BmgT120I GGNCC 1 cut(s) 193
BmiI GGNNCC 1 cut(s) 1093
BmrFI CCNGG 2 cut(s) 371, 813
BmrI ACTGGG 2 cut(s) 860, 1313
BmsI GCATC 2 cut(s) 100, 1045
BmtI GCTAGC 1 cut(s) 1239
BmuI ACTGGG 2 cut(s) 860, 1313
BpiI GAAGAC 2 cut(s) 176, 864
BpuEI CTTGAG 1 cut(s) 59
BpuMI CCSGG 1 cut(s) 813
Bsa29I ATCGAT 2 cut(s) 1124, 1386
BsaAI YACGTR 1 cut(s) 1434
BsaHI GRCGYC 1 cut(s) 173
BsaI GGTCTC 1 cut(s) 1029
BsaJI CCNNGG 1 cut(s) 604
Bsc4I CCNNNNNNNGG 6 cut(s) 266, 574, 610, 669, 1055, 1205
Bse1I ACTGG 3 cut(s) 627, 855, 1308
BseBI CCWGG 1 cut(s) 371
BseCI ATCGAT 2 cut(s) 1124, 1386
BseDI CCNNGG 1 cut(s) 604
BseGI GGATG 5 cut(s) 19, 115, 151, 614, 993
BseLI CCNNNNNNNGG 6 cut(s) 266, 574, 610, 669, 1055, 1205
BseMII CTCAG 4 cut(s) 62, 211, 683, 1040
BseNI ACTGG 3 cut(s) 627, 855, 1308
BseSI GKGCMC 1 cut(s) 1085
BseXI GCAGC 3 cut(s) 348, 520, 1315
BseYI CCCAGC 1 cut(s) 55
Bsh1285I CGRYCG 1 cut(s) 1386
BshFI GGCC 1 cut(s) 194
BshVI ATCGAT 2 cut(s) 1124, 1386
BsiEI CGRYCG 1 cut(s) 1386
BsiHKAI GWGCWC 1 cut(s) 1085
BsiHKCI CYCGRG 1 cut(s) 435
BsiSI CCGG 1 cut(s) 812
BslFI GGGAC 1 cut(s) 380
BslI CCNNNNNNNGG 6 cut(s) 266, 574, 610, 669, 1055, 1205
BsmAI GTCTC 4 cut(s) 467, 726, 1029, 1181
BsmBI CGTCTC 2 cut(s) 467, 1181
BsmFI GGGAC 1 cut(s) 380
BsmI GAATGC 1 cut(s) 1353
BsnI GGCC 1 cut(s) 194
Bso31I GGTCTC 1 cut(s) 1029
BsoBI CYCGRG 1 cut(s) 435
Bsp1286I GDGCHC 1 cut(s) 1085
Bsp143I GATC 6 cut(s) 325, 469, 764, 1091, 1383, 1387
BspACI CCGC 3 cut(s) 297, 827, 1365
BspANI GGCC 1 cut(s) 194
BspCNI CTCAG 4 cut(s) 63, 210, 684, 1039
BspDI ATCGAT 2 cut(s) 1124, 1386
BspLI GGNNCC 1 cut(s) 1093
BspMI ACCTGC 3 cut(s) 518, 623, 898
BspOI GCTAGC 1 cut(s) 1239
BspPI GGATC 4 cut(s) 464, 1086, 1099, 1382
BspTI CTTAAG 1 cut(s) 421
BspTNI GGTCTC 1 cut(s) 1029
BsrI ACTGG 3 cut(s) 627, 855, 1308
BssECI CCNNGG 1 cut(s) 604
BssMI GATC 6 cut(s) 325, 469, 764, 1091, 1383, 1387
BssNI GRCGYC 1 cut(s) 173
BssSI CACGAG 1 cut(s) 723
BssT1I CCWWGG 1 cut(s) 604
Bst2BI CACGAG 1 cut(s) 723
Bst2UI CCWGG 1 cut(s) 371
Bst4CI ACNGT 3 cut(s) 1058, 1142, 1203
Bst6I CTCTTC 1 cut(s) 341
BstACI GRCGYC 1 cut(s) 173
BstAFI CTTAAG 1 cut(s) 421
BstAPI GCANNNNNTGC 2 cut(s) 533, 1295
BstBAI YACGTR 1 cut(s) 1434
BstC8I GCNNGC 3 cut(s) 295, 428, 1237
BstDEI CTNAG 5 cut(s) 71, 197, 692, 842, 1026
BstF5I GGATG 5 cut(s) 19, 115, 151, 614, 993
BstH2I RGCGCY 1 cut(s) 9
BstHHI GCGC 2 cut(s) 8, 632
BstKTI GATC 6 cut(s) 328, 472, 767, 1094, 1386, 1390
BstMAI GTCTC 4 cut(s) 467, 726, 1029, 1181
BstMBI GATC 6 cut(s) 325, 469, 764, 1091, 1383, 1387
BstMCI CGRYCG 1 cut(s) 1386
BstMWI GCNNNNNNNGC 4 cut(s) 299, 533, 1295, 1334
BstNI CCWGG 1 cut(s) 371
BstSCI CCNGG 2 cut(s) 369, 811
BstSLI GKGCMC 1 cut(s) 1085
BstV1I GCAGC 3 cut(s) 348, 520, 1315
BstV2I GAAGAC 2 cut(s) 176, 864
BstX2I RGATCY 3 cut(s) 325, 469, 1091
BstYI RGATCY 3 cut(s) 325, 469, 1091
Bsu15I ATCGAT 2 cut(s) 1124, 1386
BsuRI GGCC 1 cut(s) 194
BsuTUI ATCGAT 2 cut(s) 1124, 1386
BtrI CACGTC 1 cut(s) 559
BtsCI GGATG 5 cut(s) 19, 115, 151, 614, 993
BtsIMutI CAGTG 3 cut(s) 848, 1034, 1199
BveI ACCTGC 3 cut(s) 518, 623, 898
Cac8I GCNNGC 3 cut(s) 295, 428, 1237
CfoI GCGC 2 cut(s) 8, 632
Cfr13I GGNCC 1 cut(s) 193
ClaI ATCGAT 2 cut(s) 1124, 1386
CseI GACGC 1 cut(s) 181
Csp6I GTAC 4 cut(s) 542, 1157, 1284, 1301
CviAII CATG 4 cut(s) 127, 290, 383, 512
CviQI GTAC 4 cut(s) 542, 1157, 1284, 1301
DdeI CTNAG 5 cut(s) 71, 197, 692, 842, 1026
DpnI GATC 6 cut(s) 327, 471, 766, 1093, 1385, 1389
DpnII GATC 6 cut(s) 325, 469, 764, 1091, 1383, 1387
DraIII CACNNNGTG 1 cut(s) 854
DriI GACNNNNNGTC 1 cut(s) 314
Eam1104I CTCTTC 1 cut(s) 341
Eam1105I GACNNNNNGTC 1 cut(s) 314
EarI CTCTTC 1 cut(s) 341
EciI GGCGGA 1 cut(s) 312
Eco130I CCWWGG 1 cut(s) 604
Eco31I GGTCTC 1 cut(s) 1029
Eco32I GATATC 2 cut(s) 1194, 1419
Eco57I CTGAAG 1 cut(s) 282
Eco72I CACGTG 1 cut(s) 1434
Eco88I CYCGRG 1 cut(s) 435
EcoO109I RGGNCCY 1 cut(s) 193
EcoRII CCWGG 1 cut(s) 369
EcoRV GATATC 2 cut(s) 1194, 1419
EcoT14I CCWWGG 1 cut(s) 604
ErhI CCWWGG 1 cut(s) 604
Esp3I CGTCTC 2 cut(s) 467, 1181
FaeI CATG 4 cut(s) 130, 293, 386, 515
FaqI GGGAC 1 cut(s) 380
FatI CATG 4 cut(s) 126, 289, 382, 511
Fnu4HI GCNGC 3 cut(s) 362, 509, 1329
FokI GGATG 5 cut(s) 26, 122, 158, 621, 980
Fsp4HI GCNGC 3 cut(s) 362, 509, 1329
FspBI CTAG 4 cut(s) 482, 1236, 1257, 1392
GlaI GCGC 2 cut(s) 7, 631
GluI GCNGC 3 cut(s) 362, 509, 1329
GsaI CCCAGC 1 cut(s) 59
HaeII RGCGCY 1 cut(s) 9
HaeIII GGCC 1 cut(s) 194
HapII CCGG 1 cut(s) 812
HgaI GACGC 1 cut(s) 181
HhaI GCGC 2 cut(s) 8, 632
Hin1I GRCGYC 1 cut(s) 173
Hin1II CATG 4 cut(s) 130, 293, 386, 515
Hin6I GCGC 2 cut(s) 6, 630
HinP1I GCGC 2 cut(s) 6, 630
HincII GTYRAC 2 cut(s) 151, 407
HindII GTYRAC 2 cut(s) 151, 407
HpaI GTTAAC 1 cut(s) 151
HpaII CCGG 1 cut(s) 812
HphI GGTGA 4 cut(s) 737, 832, 866, 1188
Hpy166II GTNNAC 4 cut(s) 151, 308, 407, 1083
Hpy188I TCNGA 5 cut(s) 34, 200, 701, 964, 1003
Hpy8I GTNNAC 4 cut(s) 151, 308, 407, 1083
HpyAV CCTTC 7 cut(s) 152, 184, 197, 408, 799, 865, 1082
HpyCH4III ACNGT 3 cut(s) 1058, 1142, 1203
HpyCH4IV ACGT 4 cut(s) 460, 478, 558, 1433
HpyF10VI GCNNNNNNNGC 4 cut(s) 299, 533, 1295, 1334
HpyF3I CTNAG 5 cut(s) 71, 197, 692, 842, 1026
HpySE526I ACGT 4 cut(s) 460, 478, 558, 1433
Hsp92I GRCGYC 1 cut(s) 173
Hsp92II CATG 4 cut(s) 130, 293, 386, 515
HspAI GCGC 2 cut(s) 6, 630
KspAI GTTAAC 1 cut(s) 151
Kzo9I GATC 6 cut(s) 325, 469, 764, 1091, 1383, 1387
LmnI GCTCC 4 cut(s) 34, 299, 874, 1155
Lsp1109I GCAGC 3 cut(s) 348, 520, 1315
LweI GCATC 2 cut(s) 100, 1045
MaeI CTAG 4 cut(s) 482, 1236, 1257, 1392
MaeII ACGT 4 cut(s) 460, 478, 558, 1433
MaeIII GTNAC 5 cut(s) 215, 618, 820, 846, 929
MalI GATC 6 cut(s) 327, 471, 766, 1093, 1385, 1389
MboI GATC 6 cut(s) 325, 469, 764, 1091, 1383, 1387
MboII GAAGA 6 cut(s) 95, 178, 181, 328, 759, 869
MfeI CAATTG 2 cut(s) 780, 1293
MflI RGATCY 3 cut(s) 325, 469, 1091
MhlI GDGCHC 1 cut(s) 1085
MluCI AATT 4 cut(s) 780, 837, 1293, 1405
MlyI GAGTC 4 cut(s) 587, 651, 694, 1161
MnlI CCTC 9 cut(s) 10, 73, 100, 136, 206, 344, 695, 1225, 1253
MseI TTAA 7 cut(s) 150, 231, 375, 422, 866, 1146, 1413
MslI CAYNNNNRTG 2 cut(s) 710, 1247
MspCI CTTAAG 1 cut(s) 421
MspI CCGG 1 cut(s) 812
MspR9I CCNGG 2 cut(s) 371, 813
MunI CAATTG 2 cut(s) 780, 1293
Mva1269I GAATGC 1 cut(s) 1353
MvaI CCWGG 1 cut(s) 371
MwoI GCNNNNNNNGC 4 cut(s) 299, 533, 1295, 1334
NciI CCSGG 1 cut(s) 813
NdeII GATC 6 cut(s) 325, 469, 764, 1091, 1383, 1387
NheI GCTAGC 1 cut(s) 1235
NlaIII CATG 4 cut(s) 130, 293, 386, 515
NlaIV GGNNCC 1 cut(s) 1093
NmuCI GTSAC 2 cut(s) 820, 846
PaeR7I CTCGAG 1 cut(s) 435
PaqCI CACCTGC 2 cut(s) 518, 898
PctI GAATGC 1 cut(s) 1353
PfeI GAWTC 6 cut(s) 350, 516, 578, 696, 800, 1263
PflMI CCANNNNNTGG 1 cut(s) 669
PfoI TCCNGGA 1 cut(s) 811
PkrI GCNGC 3 cut(s) 363, 510, 1330
Ple19I CGATCG 1 cut(s) 1386
PleI GAGTC 4 cut(s) 587, 650, 693, 1161
PmaCI CACGTG 1 cut(s) 1434
PmlI CACGTG 1 cut(s) 1434
PpsI GAGTC 4 cut(s) 587, 650, 693, 1161
Ppu21I YACGTR 1 cut(s) 1434
Psp6I CCWGG 1 cut(s) 369
PspCI CACGTG 1 cut(s) 1434
PspFI CCCAGC 1 cut(s) 55
PspGI CCWGG 1 cut(s) 369
PspN4I GGNNCC 1 cut(s) 1093
PspPI GGNCC 1 cut(s) 193
PsuI RGATCY 3 cut(s) 325, 469, 1091
PvuI CGATCG 1 cut(s) 1386
RsaI GTAC 4 cut(s) 543, 1158, 1285, 1302
RsaNI GTAC 4 cut(s) 542, 1157, 1284, 1301
RseI CAYNNNNRTG 2 cut(s) 710, 1247
SaqAI TTAA 7 cut(s) 150, 231, 375, 422, 866, 1146, 1413
SatI GCNGC 3 cut(s) 362, 509, 1329
Sau3AI GATC 6 cut(s) 325, 469, 764, 1091, 1383, 1387
Sau96I GGNCC 1 cut(s) 193
SchI GAGTC 4 cut(s) 587, 651, 694, 1161
ScrFI CCNGG 2 cut(s) 371, 813
SduI GDGCHC 1 cut(s) 1085
SfaNI GCATC 2 cut(s) 100, 1045
Sfr274I CTCGAG 1 cut(s) 435
SlaI CTCGAG 1 cut(s) 435
SmiMI CAYNNNNRTG 2 cut(s) 710, 1247
SmlI CTYRAG 3 cut(s) 38, 421, 435
SmoI CTYRAG 3 cut(s) 38, 421, 435
Sse9I AATT 4 cut(s) 780, 837, 1293, 1405
SsiI CCGC 3 cut(s) 297, 827, 1365
SspI AATATT 1 cut(s) 667
SspMI CTAG 4 cut(s) 482, 1236, 1257, 1392
StyD4I CCNGG 2 cut(s) 369, 811
StyI CCWWGG 1 cut(s) 604
TaaI ACNGT 3 cut(s) 1058, 1142, 1203
TaiI ACGT 4 cut(s) 463, 481, 561, 1436
TasI AATT 4 cut(s) 780, 837, 1293, 1405
TatI WGTACW 3 cut(s) 1156, 1283, 1300
TfiI GAWTC 6 cut(s) 350, 516, 578, 696, 800, 1263
Tru1I TTAA 7 cut(s) 150, 231, 375, 422, 866, 1146, 1413
Tru9I TTAA 7 cut(s) 150, 231, 375, 422, 866, 1146, 1413
TscAI CASTG 3 cut(s) 855, 1034, 1206
TseFI GTSAC 2 cut(s) 820, 846
TseI GCWGC 3 cut(s) 361, 508, 1328
Tsp45I GTSAC 2 cut(s) 820, 846
TspDTI ATGAA 4 cut(s) 504, 929, 956, 1386
TspRI CASTG 3 cut(s) 855, 1034, 1206
Van91I CCANNNNNTGG 1 cut(s) 669
Vha464I CTTAAG 1 cut(s) 421
VneI GTGCAC 1 cut(s) 1081
XapI RAATTY 1 cut(s) 1405
XbaI TCTAGA 1 cut(s) 1256
XhoI CTCGAG 1 cut(s) 435
XspI CTAG 4 cut(s) 482, 1236, 1257, 1392
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.