Prupe.8G198800_v2.0.a1

Mitochondrial import inner membrane translocase subunit Tim17 Tim22 Tim23 family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0015193
Physical Location & Seq
Forward (+)
18913227 .. 18915365
2139 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G198800.1

Sequence Viewer

Length: 582 bp
ATGGCTTCAGATGATCCCAAAGCTATAGAAGCAGAGCCTCCATCTTCGTCTTGGAAGGAGCGCATCGTCTTTCCCACTCTCCTCGCTGGGATTGTTGGTGGAGGAGCTGGTTTGGTCTCCAACCATCGAAAAGTTGTGGGTCTTCCAACCAGTTGTGCAACTTATGCTGCTAATTTCGCCATTGTCACTGCTTGTTATTGCGGGGCTCGGGAATATGTGAGTGTAACTCGAAAAACTGGACCGGATGATCTGGTAAACTCTGCAATTGCTGGCTTTGGTACTGGTGCCATTCTTGGGCGTCTTCAGGGTGGTCGAATTGGTGCCGTCCGCTACTCAATCATCTTTTCTGTTGTTGGGACAACAGTGGATTATGCTACAATTAAACTAAGACCTGTCTTAAAGAGCTACAAAGAATCTATGCTTGGGAGTAATGACGGTAAGAATGCTGGTTCGCTGAAAATGCCTGACTGGTCTCCTATCAAAGTACTCGATGAGGAAGCCCTTGCTGCAAAGCAGGCTCGTGAAAAACAGATGTATGCACAGAAGGCAGCACTTGGTAACCTTAGCAAAGAAGAGTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Tim17

Protein Analysis

194

Amino Acids

20.34

Weight (kDa)

9.1

Isoelectric Point (pI)

36.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015193)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G25120
fragaria_vesca FvH4_2g18530
malus_domestica MD05G1171500.v1.1 MD10G1159700.v1.1
prunus_persica Prupe.8G198800_v2.0.a1
pyrus_communis pycom05g15820 pycom10g13790
rosa_chinensis RchiOBHm_Chr6g0284091
rosa_laevigata RLG00000012770
rosa_roxburghii Rroxscaffold_7G00184940
rosa_rugosa Rorug06G0160600
rosa_samantha Rh6AG273400 Rh6BG274100 Rh6CG275500 Rh6DG268600
rosa_wichuraiana Rw6G023530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 284, 320
AciI CCGC 2 cut(s) 201, 328
AclWI GGATC 1 cut(s) 8
AcuI CTGAAG 1 cut(s) 287
AcyI GRCGYC 1 cut(s) 298
AfaI GTAC 2 cut(s) 280, 486
AfiI CCNNNNNNNGG 1 cut(s) 294
AjuI GAANNNNNNNTTGG 2 cut(s) 405, 437
AluBI AGCT 3 cut(s) 23, 107, 405
AluI AGCT 3 cut(s) 23, 107, 405
Alw26I GTCTC 2 cut(s) 121, 477
AlwI GGATC 1 cut(s) 8
Ama87I CYCGRG 1 cut(s) 207
ApeKI GCWGC 3 cut(s) 167, 506, 548
AspLEI GCGC 1 cut(s) 63
AspS9I GGNCC 1 cut(s) 239
AvaI CYCGRG 1 cut(s) 207
AvaII GGWCC 1 cut(s) 239
BanI GGYRCC 2 cut(s) 284, 320
BanII GRGCYC 1 cut(s) 208
BauI CACGAG 1 cut(s) 519
BbsI GAAGAC 2 cut(s) 134, 293
BbvI GCAGC 3 cut(s) 154, 493, 560
BccI CCATC 2 cut(s) 49, 132
BceAI ACGGC 1 cut(s) 308
BcoDI GTCTC 2 cut(s) 121, 477
BfmI CTRYAG 1 cut(s) 24
BisI GCNGC 3 cut(s) 168, 507, 549
BlsI GCNGC 3 cut(s) 169, 508, 550
BmcAI AGTACT 1 cut(s) 486
Bme18I GGWCC 1 cut(s) 239
BmeT110I CYCGRG 1 cut(s) 207
BmgT120I GGNCC 1 cut(s) 239
BmiI GGNNCC 2 cut(s) 286, 322
BmsI GCATC 1 cut(s) 72
BpiI GAAGAC 2 cut(s) 134, 293
BplI GAGNNNNNCTC 2 cut(s) 211, 243
Bpu10I CCTNAGC 1 cut(s) 563
BsaHI GRCGYC 1 cut(s) 298
BsaI GGTCTC 2 cut(s) 121, 477
BsaWI WCCGGW 1 cut(s) 241
Bsc4I CCNNNNNNNGG 1 cut(s) 294
Bse1I ACTGG 4 cut(s) 150, 241, 286, 473
BseGI GGATG 1 cut(s) 250
BseLI CCNNNNNNNGG 1 cut(s) 294
BseNI ACTGG 4 cut(s) 150, 241, 286, 473
BseRI GAGGAG 2 cut(s) 71, 117
BseXI GCAGC 3 cut(s) 154, 493, 560
BseYI CCCAGC 1 cut(s) 86
BshNI GGYRCC 2 cut(s) 284, 320
BsiHKCI CYCGRG 1 cut(s) 207
BsiSI CCGG 1 cut(s) 242
BslFI GGGAC 1 cut(s) 370
BslI CCNNNNNNNGG 1 cut(s) 294
BsmAI GTCTC 2 cut(s) 121, 477
BsmFI GGGAC 1 cut(s) 370
BsmI GAATGC 1 cut(s) 448
Bso31I GGTCTC 2 cut(s) 121, 477
BsoBI CYCGRG 1 cut(s) 207
Bsp1286I GDGCHC 1 cut(s) 208
Bsp143I GATC 2 cut(s) 13, 247
BspACI CCGC 2 cut(s) 201, 328
BspLI GGNNCC 2 cut(s) 286, 322
BspPI GGATC 1 cut(s) 8
BspT107I GGYRCC 2 cut(s) 284, 320
BspTNI GGTCTC 2 cut(s) 121, 477
BsrI ACTGG 4 cut(s) 150, 241, 286, 473
BssMI GATC 2 cut(s) 13, 247
BssNI GRCGYC 1 cut(s) 298
BssSI CACGAG 1 cut(s) 519
Bst2BI CACGAG 1 cut(s) 519
Bst4CI ACNGT 2 cut(s) 364, 437
Bst6I CTCTTC 1 cut(s) 567
BstACI GRCGYC 1 cut(s) 298
BstAPI GCANNNNNTGC 1 cut(s) 164
BstC8I GCNNGC 2 cut(s) 271, 516
BstDEI CTNAG 2 cut(s) 386, 563
BstEII GGTNACC 1 cut(s) 557
BstF5I GGATG 1 cut(s) 250
BstHHI GCGC 1 cut(s) 63
BstKTI GATC 2 cut(s) 16, 250
BstMAI GTCTC 2 cut(s) 121, 477
BstMBI GATC 2 cut(s) 13, 247
BstMWI GCNNNNNNNGC 7 cut(s) 29, 164, 176, 460, 506, 515, 545
BstPI GGTNACC 1 cut(s) 557
BstSFI CTRYAG 1 cut(s) 24
BstV1I GCAGC 3 cut(s) 154, 493, 560
BstV2I GAAGAC 2 cut(s) 134, 293
BtsCI GGATG 1 cut(s) 250
BtsI GCAGTG 1 cut(s) 186
BtsIMutI CAGTG 2 cut(s) 186, 369
Cac8I GCNNGC 2 cut(s) 271, 516
CfoI GCGC 1 cut(s) 63
Cfr13I GGNCC 1 cut(s) 239
CseI GACGC 1 cut(s) 287
Csp6I GTAC 2 cut(s) 279, 485
CviJI RGCY 9 cut(s) 5, 23, 37, 107, 206, 273, 405, 500, 518
CviKI_1 RGCY 9 cut(s) 5, 23, 37, 107, 206, 273, 405, 500, 518
CviQI GTAC 2 cut(s) 279, 485
DdeI CTNAG 2 cut(s) 386, 563
DpnI GATC 2 cut(s) 15, 249
DpnII GATC 2 cut(s) 13, 247
Eam1104I CTCTTC 1 cut(s) 567
EarI CTCTTC 1 cut(s) 567
Eco24I GRGCYC 1 cut(s) 208
Eco31I GGTCTC 2 cut(s) 121, 477
Eco47I GGWCC 1 cut(s) 239
Eco57I CTGAAG 1 cut(s) 287
Eco88I CYCGRG 1 cut(s) 207
Eco91I GGTNACC 1 cut(s) 557
EcoO65I GGTNACC 1 cut(s) 557
EcoT38I GRGCYC 1 cut(s) 208
FaiI YATR 6 cut(s) 26, 165, 216, 372, 419, 537
FaqI GGGAC 1 cut(s) 370
FauI CCCGC 1 cut(s) 194
Fnu4HI GCNGC 3 cut(s) 168, 507, 549
FokI GGATG 1 cut(s) 257
FriOI GRGCYC 1 cut(s) 208
Fsp4HI GCNGC 3 cut(s) 168, 507, 549
GlaI GCGC 1 cut(s) 62
GluI GCNGC 3 cut(s) 168, 507, 549
GsaI CCCAGC 1 cut(s) 90
HapII CCGG 1 cut(s) 242
HgaI GACGC 1 cut(s) 287
HhaI GCGC 1 cut(s) 63
Hin1I GRCGYC 1 cut(s) 298
Hin6I GCGC 1 cut(s) 61
HinP1I GCGC 1 cut(s) 61
HinfI GANTC 2 cut(s) 413, 575
HpaII CCGG 1 cut(s) 242
Hpy166II GTNNAC 1 cut(s) 256
Hpy188I TCNGA 1 cut(s) 10
Hpy188III TCNNGA 3 cut(s) 209, 521, 579
Hpy8I GTNNAC 1 cut(s) 256
HpyAV CCTTC 2 cut(s) 49, 538
HpyCH4III ACNGT 2 cut(s) 364, 437
HpyCH4V TGCA 4 cut(s) 158, 263, 509, 539
HpyF10VI GCNNNNNNNGC 7 cut(s) 29, 164, 176, 460, 506, 515, 545
HpyF3I CTNAG 2 cut(s) 386, 563
Hsp92I GRCGYC 1 cut(s) 298
HspAI GCGC 1 cut(s) 61
Kzo9I GATC 2 cut(s) 13, 247
LmnI GCTCC 2 cut(s) 58, 104
Lsp1109I GCAGC 3 cut(s) 154, 493, 560
LweI GCATC 1 cut(s) 72
MaeIII GTNAC 3 cut(s) 184, 223, 557
MalI GATC 2 cut(s) 15, 249
MboI GATC 2 cut(s) 13, 247
MboII GAAGA 3 cut(s) 36, 134, 293
MfeI CAATTG 1 cut(s) 264
MhlI GDGCHC 1 cut(s) 208
MluCI AATT 4 cut(s) 172, 264, 315, 378
MmeI TCCRAC 2 cut(s) 144, 170
MnlI CCTC 4 cut(s) 48, 92, 95, 487
MseI TTAA 2 cut(s) 381, 398
MspI CCGG 1 cut(s) 242
MunI CAATTG 1 cut(s) 264
Mva1269I GAATGC 1 cut(s) 448
MwoI GCNNNNNNNGC 7 cut(s) 29, 164, 176, 460, 506, 515, 545
NdeII GATC 2 cut(s) 13, 247
NlaIV GGNNCC 2 cut(s) 286, 322
NmuCI GTSAC 1 cut(s) 184
PctI GAATGC 1 cut(s) 448
PfeI GAWTC 1 cut(s) 413
PkrI GCNGC 3 cut(s) 169, 508, 550
PspEI GGTNACC 1 cut(s) 557
PspFI CCCAGC 1 cut(s) 86
PspN4I GGNNCC 2 cut(s) 286, 322
PspPI GGNCC 1 cut(s) 239
RsaI GTAC 2 cut(s) 280, 486
RsaNI GTAC 2 cut(s) 279, 485
SaqAI TTAA 2 cut(s) 381, 398
SatI GCNGC 3 cut(s) 168, 507, 549
Sau3AI GATC 2 cut(s) 13, 247
Sau96I GGNCC 1 cut(s) 239
ScaI AGTACT 1 cut(s) 486
SduI GDGCHC 1 cut(s) 208
SetI ASST 5 cut(s) 25, 109, 394, 407, 564
SfaNI GCATC 1 cut(s) 72
SfcI CTRYAG 1 cut(s) 24
SinI GGWCC 1 cut(s) 239
Sse9I AATT 4 cut(s) 172, 264, 315, 378
SsiI CCGC 2 cut(s) 201, 328
TaaI ACNGT 2 cut(s) 364, 437
TaqI TCGA 4 cut(s) 127, 229, 313, 489
TasI AATT 4 cut(s) 172, 264, 315, 378
TatI WGTACW 1 cut(s) 484
TfiI GAWTC 1 cut(s) 413
Tru1I TTAA 2 cut(s) 381, 398
Tru9I TTAA 2 cut(s) 381, 398
TscAI CASTG 2 cut(s) 193, 369
TseFI GTSAC 1 cut(s) 184
TseI GCWGC 3 cut(s) 167, 506, 548
Tsp45I GTSAC 1 cut(s) 184
TspRI CASTG 2 cut(s) 193, 369
VpaK11BI GGWCC 1 cut(s) 239
XcmI CCANNNNNNNNNTGG 1 cut(s) 48
ZrmI AGTACT 1 cut(s) 486
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.