Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate- level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G20420 |
| fragaria_vesca | FvH4_2g20990 FvH4_2g20990 FvH4_2g20990 |
| malus_domestica | MD05G1193100.v1.1 MD10G1179600.v1.1 |
| prunus_persica | Prupe.8G219400_v2.0.a1 Prupe.8G219400_v2.0.a1 |
| pyrus_communis | pycom05g18000 pycom10g15570 |
| rosa_chinensis | RchiOBHm_Chr6g0287371 |
| rosa_laevigata | RLG00000012494 |
| rosa_multiflora | Rmu_sc0007029.1_g000025 |
| rosa_roxburghii | Rroxscaffold_7G00181490 |
| rosa_rugosa | Rorug06G0187700.1 |
| rosa_samantha | Rh6AG298900 Rh6BG304500 Rh6CG305200 Rh6CG313000 Rh6DG296300 |
| rosa_wichuraiana | Rw6G025830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 473 |
| Acc65I | GGTACC | 1 cut(s) | 544 |
| AccB1I | GGYRCC | 2 cut(s) | 544, 1157 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 235 |
| AciI | CCGC | 5 cut(s) | 76, 79, 585, 975, 1247 |
| AclWI | GGATC | 4 cut(s) | 456, 800, 815, 828 |
| AcoI | YGGCCR | 1 cut(s) | 618 |
| AcsI | RAATTY | 2 cut(s) | 521, 1182 |
| AcuI | CTGAAG | 2 cut(s) | 38, 1208 |
| AfaI | GTAC | 2 cut(s) | 431, 546 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 57, 235 |
| AflII | CTTAAG | 1 cut(s) | 275 |
| AgsI | TTSAA | 5 cut(s) | 314, 506, 636, 754, 856 |
| AjnI | CCWGG | 1 cut(s) | 993 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1031, 1063 |
| AluBI | AGCT | 6 cut(s) | 25, 73, 664, 730, 737, 911 |
| AluI | AGCT | 6 cut(s) | 25, 73, 664, 730, 737, 911 |
| Alw26I | GTCTC | 3 cut(s) | 668, 707, 1154 |
| AlwI | GGATC | 4 cut(s) | 456, 800, 815, 828 |
| Ama87I | CYCGRG | 1 cut(s) | 825 |
| AoxI | GGCC | 2 cut(s) | 463, 618 |
| ApoI | RAATTY | 2 cut(s) | 521, 1182 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 631, 982 |
| Asp718I | GGTACC | 1 cut(s) | 544 |
| AspS9I | GGNCC | 2 cut(s) | 365, 464 |
| AsuC2I | CCSGG | 1 cut(s) | 299 |
| AsuHPI | GGTGA | 3 cut(s) | 16, 904, 1063 |
| AvaI | CYCGRG | 1 cut(s) | 825 |
| AvaII | GGWCC | 1 cut(s) | 365 |
| AxyI | CCTNAGG | 1 cut(s) | 369 |
| BaeGI | GKGCMC | 1 cut(s) | 1137 |
| BamHI | GGATCC | 1 cut(s) | 820 |
| BanI | GGYRCC | 2 cut(s) | 544, 1157 |
| BbsI | GAAGAC | 1 cut(s) | 513 |
| BccI | CCATC | 2 cut(s) | 593, 866 |
| BceAI | ACGGC | 1 cut(s) | 137 |
| BciT130I | CCWGG | 1 cut(s) | 995 |
| BclI | TGATCA | 1 cut(s) | 529 |
| BcnI | CCSGG | 1 cut(s) | 299 |
| BcoDI | GTCTC | 3 cut(s) | 668, 707, 1154 |
| BfaI | CTAG | 2 cut(s) | 731, 1127 |
| BfrI | CTTAAG | 1 cut(s) | 275 |
| BglII | AGATCT | 1 cut(s) | 1222 |
| Bme1390I | CCNGG | 2 cut(s) | 299, 995 |
| Bme18I | GGWCC | 1 cut(s) | 365 |
| BmeT110I | CYCGRG | 1 cut(s) | 825 |
| BmgT120I | GGNCC | 2 cut(s) | 365, 464 |
| BmiI | GGNNCC | 5 cut(s) | 259, 546, 609, 822, 1159 |
| BmrFI | CCNGG | 2 cut(s) | 299, 995 |
| BmsI | GCATC | 5 cut(s) | 167, 321, 571, 733, 1222 |
| BpiI | GAAGAC | 1 cut(s) | 513 |
| BpuMI | CCSGG | 1 cut(s) | 299 |
| Bsa29I | ATCGAT | 1 cut(s) | 639 |
| BsaJI | CCNNGG | 3 cut(s) | 201, 1137, 1171 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 57, 235 |
| Bse1I | ACTGG | 1 cut(s) | 568 |
| Bse21I | CCTNAGG | 1 cut(s) | 369 |
| BseBI | CCWGG | 1 cut(s) | 995 |
| BseCI | ATCGAT | 1 cut(s) | 639 |
| BseDI | CCNNGG | 3 cut(s) | 201, 1137, 1171 |
| BseGI | GGATG | 4 cut(s) | 87, 158, 196, 1234 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 57, 235 |
| BseMII | CTCAG | 2 cut(s) | 383, 507 |
| BseNI | ACTGG | 1 cut(s) | 568 |
| BseSI | GKGCMC | 1 cut(s) | 1137 |
| BsgI | GTGCAG | 2 cut(s) | 667, 921 |
| BshFI | GGCC | 2 cut(s) | 465, 620 |
| BshNI | GGYRCC | 2 cut(s) | 544, 1157 |
| BshVI | ATCGAT | 1 cut(s) | 639 |
| BsiHKCI | CYCGRG | 1 cut(s) | 825 |
| BsiSI | CCGG | 2 cut(s) | 51, 299 |
| BslFI | GGGAC | 1 cut(s) | 281 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 57, 235 |
| BsmAI | GTCTC | 3 cut(s) | 668, 707, 1154 |
| BsmBI | CGTCTC | 1 cut(s) | 1154 |
| BsmFI | GGGAC | 1 cut(s) | 281 |
| BsnI | GGCC | 2 cut(s) | 465, 620 |
| BsoBI | CYCGRG | 1 cut(s) | 825 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1137 |
| Bsp143I | GATC | 6 cut(s) | 448, 529, 640, 805, 820, 1222 |
| BspACI | CCGC | 5 cut(s) | 76, 79, 585, 975, 1247 |
| BspANI | GGCC | 2 cut(s) | 465, 620 |
| BspCNI | CTCAG | 2 cut(s) | 382, 508 |
| BspDI | ATCGAT | 1 cut(s) | 639 |
| BspLI | GGNNCC | 5 cut(s) | 259, 546, 609, 822, 1159 |
| BspPI | GGATC | 4 cut(s) | 456, 800, 815, 828 |
| BspQI | GCTCTTC | 1 cut(s) | 804 |
| BspT107I | GGYRCC | 2 cut(s) | 544, 1157 |
| BspTI | CTTAAG | 1 cut(s) | 275 |
| BsrI | ACTGG | 1 cut(s) | 568 |
| BssECI | CCNNGG | 3 cut(s) | 201, 1137, 1171 |
| BssMI | GATC | 6 cut(s) | 448, 529, 640, 805, 820, 1222 |
| BssT1I | CCWWGG | 2 cut(s) | 201, 1171 |
| Bst2UI | CCWGG | 1 cut(s) | 995 |
| Bst6I | CTCTTC | 2 cut(s) | 241, 804 |
| BstAFI | CTTAAG | 1 cut(s) | 275 |
| BstC8I | GCNNGC | 2 cut(s) | 325, 463 |
| BstDEI | CTNAG | 2 cut(s) | 369, 516 |
| BstDSI | CCRYGG | 1 cut(s) | 1137 |
| BstF5I | GGATG | 4 cut(s) | 87, 158, 196, 1234 |
| BstKTI | GATC | 6 cut(s) | 451, 532, 643, 808, 823, 1225 |
| BstMAI | GTCTC | 3 cut(s) | 668, 707, 1154 |
| BstMBI | GATC | 6 cut(s) | 448, 529, 640, 805, 820, 1222 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 70, 155, 743, 908, 1244, 1253 |
| BstNI | CCWGG | 1 cut(s) | 995 |
| BstSCI | CCNGG | 2 cut(s) | 297, 993 |
| BstSLI | GKGCMC | 1 cut(s) | 1137 |
| BstV2I | GAAGAC | 1 cut(s) | 513 |
| BstX2I | RGATCY | 2 cut(s) | 820, 1222 |
| BstYI | RGATCY | 2 cut(s) | 820, 1222 |
| Bsu15I | ATCGAT | 1 cut(s) | 639 |
| Bsu36I | CCTNAGG | 1 cut(s) | 369 |
| BsuRI | GGCC | 2 cut(s) | 465, 620 |
| BsuTUI | ATCGAT | 1 cut(s) | 639 |
| BtgI | CCRYGG | 1 cut(s) | 1137 |
| BtsCI | GGATG | 4 cut(s) | 87, 158, 196, 1234 |
| BtsIMutI | CAGTG | 3 cut(s) | 561, 676, 1256 |
| Cac8I | GCNNGC | 2 cut(s) | 325, 463 |
| Cfr13I | GGNCC | 2 cut(s) | 365, 464 |
| ClaI | ATCGAT | 1 cut(s) | 639 |
| CsiI | ACCWGGT | 1 cut(s) | 993 |
| Csp6I | GTAC | 2 cut(s) | 430, 545 |
| CviAII | CATG | 1 cut(s) | 889 |
| CviQI | GTAC | 2 cut(s) | 430, 545 |
| DdeI | CTNAG | 2 cut(s) | 369, 516 |
| DpnI | GATC | 6 cut(s) | 450, 531, 642, 807, 822, 1224 |
| DpnII | GATC | 6 cut(s) | 448, 529, 640, 805, 820, 1222 |
| DraI | TTTAAA | 1 cut(s) | 265 |
| EaeI | YGGCCR | 1 cut(s) | 618 |
| Eam1104I | CTCTTC | 2 cut(s) | 241, 804 |
| EarI | CTCTTC | 2 cut(s) | 241, 804 |
| EciI | GGCGGA | 2 cut(s) | 65, 990 |
| Eco130I | CCWWGG | 2 cut(s) | 201, 1171 |
| Eco32I | GATATC | 2 cut(s) | 319, 928 |
| Eco47I | GGWCC | 1 cut(s) | 365 |
| Eco57I | CTGAAG | 2 cut(s) | 38, 1208 |
| Eco81I | CCTNAGG | 1 cut(s) | 369 |
| Eco88I | CYCGRG | 1 cut(s) | 825 |
| EcoO109I | RGGNCCY | 1 cut(s) | 365 |
| EcoRI | GAATTC | 1 cut(s) | 1182 |
| EcoRII | CCWGG | 1 cut(s) | 993 |
| EcoRV | GATATC | 2 cut(s) | 319, 928 |
| EcoT14I | CCWWGG | 2 cut(s) | 201, 1171 |
| ErhI | CCWWGG | 2 cut(s) | 201, 1171 |
| Esp3I | CGTCTC | 1 cut(s) | 1154 |
| FaeI | CATG | 1 cut(s) | 892 |
| FaiI | YATR | 7 cut(s) | 126, 473, 658, 660, 861, 890, 914 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 740, 772 |
| FaqI | GGGAC | 1 cut(s) | 281 |
| FatI | CATG | 1 cut(s) | 888 |
| FbaI | TGATCA | 1 cut(s) | 529 |
| FokI | GGATG | 4 cut(s) | 74, 145, 203, 1241 |
| FspBI | CTAG | 2 cut(s) | 731, 1127 |
| HaeIII | GGCC | 2 cut(s) | 465, 620 |
| HapII | CCGG | 2 cut(s) | 51, 299 |
| Hin1II | CATG | 1 cut(s) | 892 |
| HincII | GTYRAC | 1 cut(s) | 1168 |
| HindII | GTYRAC | 1 cut(s) | 1168 |
| HinfI | GANTC | 3 cut(s) | 343, 1015, 1098 |
| HpaII | CCGG | 2 cut(s) | 51, 299 |
| HphI | GGTGA | 3 cut(s) | 16, 904, 1063 |
| Hpy166II | GTNNAC | 2 cut(s) | 289, 1168 |
| Hpy188I | TCNGA | 9 cut(s) | 141, 342, 534, 721, 783, 988, 1020, 1027, 1188 |
| Hpy188III | TCNNGA | 8 cut(s) | 188, 446, 692, 803, 827, 965, 1151, 1226 |
| Hpy8I | GTNNAC | 2 cut(s) | 289, 1168 |
| Hpy99I | CGWCG | 1 cut(s) | 167 |
| HpyAV | CCTTC | 2 cut(s) | 1148, 1183 |
| HpyCH4V | TGCA | 7 cut(s) | 158, 485, 684, 710, 888, 902, 1091 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 70, 155, 743, 908, 1244, 1253 |
| HpyF3I | CTNAG | 2 cut(s) | 369, 516 |
| Hsp92II | CATG | 1 cut(s) | 892 |
| KpnI | GGTACC | 1 cut(s) | 548 |
| Ksp22I | TGATCA | 1 cut(s) | 529 |
| Kzo9I | GATC | 6 cut(s) | 448, 529, 640, 805, 820, 1222 |
| LguI | GCTCTTC | 1 cut(s) | 804 |
| LmnI | GCTCC | 2 cut(s) | 78, 613 |
| LweI | GCATC | 5 cut(s) | 167, 321, 571, 733, 1222 |
| MabI | ACCWGGT | 1 cut(s) | 993 |
| MaeI | CTAG | 2 cut(s) | 731, 1127 |
| MaeIII | GTNAC | 1 cut(s) | 349 |
| MalI | GATC | 6 cut(s) | 450, 531, 642, 807, 822, 1224 |
| MboI | GATC | 6 cut(s) | 448, 529, 640, 805, 820, 1222 |
| MboII | GAAGA | 7 cut(s) | 258, 326, 518, 590, 661, 791, 1232 |
| MflI | RGATCY | 2 cut(s) | 820, 1222 |
| MhlI | GDGCHC | 1 cut(s) | 1137 |
| MmeI | TCCRAC | 1 cut(s) | 833 |
| MnlI | CCTC | 9 cut(s) | 40, 92, 242, 378, 485, 811, 823, 834, 997 |
| MroXI | GAANNNNTTC | 2 cut(s) | 631, 982 |
| MseI | TTAA | 9 cut(s) | 132, 222, 264, 276, 933, 1011, 1122, 1208, 1251 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1049 |
| MspCI | CTTAAG | 1 cut(s) | 275 |
| MspI | CCGG | 2 cut(s) | 51, 299 |
| MspR9I | CCNGG | 2 cut(s) | 299, 995 |
| MvaI | CCWGG | 1 cut(s) | 995 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 70, 155, 743, 908, 1244, 1253 |
| NciI | CCSGG | 1 cut(s) | 299 |
| NdeII | GATC | 6 cut(s) | 448, 529, 640, 805, 820, 1222 |
| NlaIII | CATG | 1 cut(s) | 892 |
| NlaIV | GGNNCC | 5 cut(s) | 259, 546, 609, 822, 1159 |
| NmeAIII | GCCGAG | 1 cut(s) | 1264 |
| PaeR7I | CTCGAG | 1 cut(s) | 825 |
| PciSI | GCTCTTC | 1 cut(s) | 804 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1149 |
| PdmI | GAANNNNTTC | 2 cut(s) | 631, 982 |
| PfeI | GAWTC | 3 cut(s) | 343, 1015, 1098 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 235 |
| PpuMI | RGGWCCY | 1 cut(s) | 365 |
| PsiI | TTATAA | 1 cut(s) | 473 |
| Psp5II | RGGWCCY | 1 cut(s) | 365 |
| Psp6I | CCWGG | 1 cut(s) | 993 |
| PspGI | CCWGG | 1 cut(s) | 993 |
| PspN4I | GGNNCC | 5 cut(s) | 259, 546, 609, 822, 1159 |
| PspPI | GGNCC | 2 cut(s) | 365, 464 |
| PspPPI | RGGWCCY | 1 cut(s) | 365 |
| PsuI | RGATCY | 2 cut(s) | 820, 1222 |
| RsaI | GTAC | 2 cut(s) | 431, 546 |
| RsaNI | GTAC | 2 cut(s) | 430, 545 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1049 |
| SapI | GCTCTTC | 1 cut(s) | 804 |
| SaqAI | TTAA | 9 cut(s) | 132, 222, 264, 276, 933, 1011, 1122, 1208, 1251 |
| Sau3AI | GATC | 6 cut(s) | 448, 529, 640, 805, 820, 1222 |
| Sau96I | GGNCC | 2 cut(s) | 365, 464 |
| ScrFI | CCNGG | 2 cut(s) | 299, 995 |
| SduI | GDGCHC | 1 cut(s) | 1137 |
| SexAI | ACCWGGT | 1 cut(s) | 993 |
| SfaNI | GCATC | 5 cut(s) | 167, 321, 571, 733, 1222 |
| Sfr274I | CTCGAG | 1 cut(s) | 825 |
| SinI | GGWCC | 1 cut(s) | 365 |
| SlaI | CTCGAG | 1 cut(s) | 825 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1049 |
| SmlI | CTYRAG | 2 cut(s) | 275, 825 |
| SmoI | CTYRAG | 2 cut(s) | 275, 825 |
| SsiI | CCGC | 5 cut(s) | 76, 79, 585, 975, 1247 |
| SspMI | CTAG | 2 cut(s) | 731, 1127 |
| StyD4I | CCNGG | 2 cut(s) | 297, 993 |
| StyI | CCWWGG | 2 cut(s) | 201, 1171 |
| TaqI | TCGA | 6 cut(s) | 165, 552, 639, 826, 966, 1152 |
| TatI | WGTACW | 1 cut(s) | 429 |
| TauI | GCSGC | 2 cut(s) | 81, 587 |
| TfiI | GAWTC | 3 cut(s) | 343, 1015, 1098 |
| Tru1I | TTAA | 9 cut(s) | 132, 222, 264, 276, 933, 1011, 1122, 1208, 1251 |
| Tru9I | TTAA | 9 cut(s) | 132, 222, 264, 276, 933, 1011, 1122, 1208, 1251 |
| TscAI | CASTG | 3 cut(s) | 568, 676, 1263 |
| TspDTI | ATGAA | 3 cut(s) | 183, 591, 1088 |
| TspGWI | ACGGA | 1 cut(s) | 151 |
| TspRI | CASTG | 3 cut(s) | 568, 676, 1263 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 235 |
| Vha464I | CTTAAG | 1 cut(s) | 275 |
| VpaK11BI | GGWCC | 1 cut(s) | 365 |
| XapI | RAATTY | 2 cut(s) | 521, 1182 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 236 |
| XhoI | CTCGAG | 1 cut(s) | 825 |
| XmnI | GAANNNNTTC | 2 cut(s) | 631, 982 |
| XspI | CTAG | 2 cut(s) | 731, 1127 |